diff --git a/brca/chief/pt_files/TCGA-A1-A0SF-01Z-00-DX1.7F252D89-EA78-419F-A969-1B7313D77499.pt b/brca/chief/pt_files/TCGA-A1-A0SF-01Z-00-DX1.7F252D89-EA78-419F-A969-1B7313D77499.pt new file mode 100644 index 0000000000000000000000000000000000000000..571375e5db74446554f62d70c94dc85ce0a20cde --- /dev/null +++ b/brca/chief/pt_files/TCGA-A1-A0SF-01Z-00-DX1.7F252D89-EA78-419F-A969-1B7313D77499.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:1d83988ed84b3473668a2272d6d2f1828b361554f15508bb1c36a25ddc944bc6 +size 29858405 diff --git a/brca/chief/pt_files/TCGA-A2-A04N-01Z-00-DX1.9E9B7DB0-1CF1-4631-8292-A9DBCA0BD37C.pt b/brca/chief/pt_files/TCGA-A2-A04N-01Z-00-DX1.9E9B7DB0-1CF1-4631-8292-A9DBCA0BD37C.pt new file mode 100644 index 0000000000000000000000000000000000000000..25991f7b7519fc67ae6551234a21e9262fdcebcc --- /dev/null +++ b/brca/chief/pt_files/TCGA-A2-A04N-01Z-00-DX1.9E9B7DB0-1CF1-4631-8292-A9DBCA0BD37C.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:4b647415992647016a60bdda169fd41060dd0e075f3963c235df42580fd80611 +size 31379045 diff --git a/brca/chief/pt_files/TCGA-A2-A0CO-01Z-00-DX1.B191DADE-7DEA-4575-AED7-1C52BE15B8D5.pt b/brca/chief/pt_files/TCGA-A2-A0CO-01Z-00-DX1.B191DADE-7DEA-4575-AED7-1C52BE15B8D5.pt new file mode 100644 index 0000000000000000000000000000000000000000..cf1b00e0a6079202a99b8a8fffde088d9926c0ab --- /dev/null +++ b/brca/chief/pt_files/TCGA-A2-A0CO-01Z-00-DX1.B191DADE-7DEA-4575-AED7-1C52BE15B8D5.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d01ebf530e29804050a64a075f94cb7157873ddbed636ca43338c252a352a67a +size 31074917 diff --git a/brca/chief/pt_files/TCGA-A2-A0CZ-01Z-00-DX1.A433A414-4F1B-4F99-8FD9-E64803F5E042.pt b/brca/chief/pt_files/TCGA-A2-A0CZ-01Z-00-DX1.A433A414-4F1B-4F99-8FD9-E64803F5E042.pt new file mode 100644 index 0000000000000000000000000000000000000000..822aea541bb42276fa2096540c518cd236718dd6 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A2-A0CZ-01Z-00-DX1.A433A414-4F1B-4F99-8FD9-E64803F5E042.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cf878e0dddc3cd04b5aee899ab48fd33818bc24ee9a9776a153858da2d1859cc +size 61923941 diff --git a/brca/chief/pt_files/TCGA-A2-A0D4-01Z-00-DX1.35E43827-DABC-4685-A62A-333672923349.pt b/brca/chief/pt_files/TCGA-A2-A0D4-01Z-00-DX1.35E43827-DABC-4685-A62A-333672923349.pt new file mode 100644 index 0000000000000000000000000000000000000000..95b6e919163d55a940dca2cd5346e877c19b6063 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A2-A0D4-01Z-00-DX1.35E43827-DABC-4685-A62A-333672923349.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:63c5730ca88f10bf32952528a168cb722ef8d0af25d3c98f6352ee00891d206d +size 32107109 diff --git a/brca/chief/pt_files/TCGA-A2-A0EV-01Z-00-DX1.EA8C5594-BA4F-47A8-949B-D536E00E62C9.pt b/brca/chief/pt_files/TCGA-A2-A0EV-01Z-00-DX1.EA8C5594-BA4F-47A8-949B-D536E00E62C9.pt new file mode 100644 index 0000000000000000000000000000000000000000..5552b084759c6e1779ff6f3ba60cb8be18ae384e --- /dev/null +++ b/brca/chief/pt_files/TCGA-A2-A0EV-01Z-00-DX1.EA8C5594-BA4F-47A8-949B-D536E00E62C9.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:80e772af0f540fa961fa1c28c0db403210f449728a67cf8c12e342c73ecff57b +size 59063909 diff --git a/brca/chief/pt_files/TCGA-A2-A0ST-01Z-00-DX1.AE05A5DB-4861-40DE-B0F5-7955FC903A96.pt b/brca/chief/pt_files/TCGA-A2-A0ST-01Z-00-DX1.AE05A5DB-4861-40DE-B0F5-7955FC903A96.pt new file mode 100644 index 0000000000000000000000000000000000000000..f35678d98506d4a2989c877014b9579f2f271f3b --- /dev/null +++ b/brca/chief/pt_files/TCGA-A2-A0ST-01Z-00-DX1.AE05A5DB-4861-40DE-B0F5-7955FC903A96.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:7694ce638252f339220df6a89658fabfb88a4e59707ff3b61cf9674b76102cb9 +size 20359781 diff --git a/brca/chief/pt_files/TCGA-A2-A0SU-01Z-00-DX1.22420EE2-4FEB-42F3-9547-4739F0F73D50.pt b/brca/chief/pt_files/TCGA-A2-A0SU-01Z-00-DX1.22420EE2-4FEB-42F3-9547-4739F0F73D50.pt new file mode 100644 index 0000000000000000000000000000000000000000..725405662cbab6e1f7f31598187fbbffc32e3616 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A2-A0SU-01Z-00-DX1.22420EE2-4FEB-42F3-9547-4739F0F73D50.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a9be811ab36b26c180e91e2cf486d50825139932531e205161e00a75cc32bc07 +size 59085413 diff --git a/brca/chief/pt_files/TCGA-A2-A0T7-01Z-00-DX1.EA4DF9B5-8D04-4BCC-9ECB-CB8CB8ACBE1C.pt b/brca/chief/pt_files/TCGA-A2-A0T7-01Z-00-DX1.EA4DF9B5-8D04-4BCC-9ECB-CB8CB8ACBE1C.pt new file mode 100644 index 0000000000000000000000000000000000000000..8b980a6147074537327c06a891af73be4b622b02 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A2-A0T7-01Z-00-DX1.EA4DF9B5-8D04-4BCC-9ECB-CB8CB8ACBE1C.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c40fcb061603d73750907778c75aafe7fddb58772b94ed712054453c04d35b29 +size 37907045 diff --git a/brca/chief/pt_files/TCGA-A2-A0YK-01Z-00-DX1.FB23FC30-B3B2-452A-A6B0-94129B333207.pt b/brca/chief/pt_files/TCGA-A2-A0YK-01Z-00-DX1.FB23FC30-B3B2-452A-A6B0-94129B333207.pt new file mode 100644 index 0000000000000000000000000000000000000000..5bcca99eff53f32cc2be1c776161bddd3de499ed --- /dev/null +++ b/brca/chief/pt_files/TCGA-A2-A0YK-01Z-00-DX1.FB23FC30-B3B2-452A-A6B0-94129B333207.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6e6d3e6693fef7127cbb6e44b6724ee0e771fd0bed0d8a377142ff5615f88781 +size 35071589 diff --git a/brca/chief/pt_files/TCGA-A2-A1FV-01Z-00-DX1.F70ACD9A-7819-4296-BD28-4D24BBA8AFF4.pt b/brca/chief/pt_files/TCGA-A2-A1FV-01Z-00-DX1.F70ACD9A-7819-4296-BD28-4D24BBA8AFF4.pt new file mode 100644 index 0000000000000000000000000000000000000000..93ae61cd49d7c24e70471bd1459d772d464f8d5b --- /dev/null +++ b/brca/chief/pt_files/TCGA-A2-A1FV-01Z-00-DX1.F70ACD9A-7819-4296-BD28-4D24BBA8AFF4.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cec299444f0ca3b3c2673566d3f60f7cab6a7db88e378b69e1bd5755d97d43ba +size 59478629 diff --git a/brca/chief/pt_files/TCGA-A2-A4RX-01Z-00-DX1.E2C96C9D-5023-4F41-8CC8-24C6E015B252.pt b/brca/chief/pt_files/TCGA-A2-A4RX-01Z-00-DX1.E2C96C9D-5023-4F41-8CC8-24C6E015B252.pt new file mode 100644 index 0000000000000000000000000000000000000000..0841b4731c15e20fce63411816e84a01e8b6cd16 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A2-A4RX-01Z-00-DX1.E2C96C9D-5023-4F41-8CC8-24C6E015B252.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d54ad16c6b322965b9c6814059026db1b95b46234a0fd21122761184a1854fd1 +size 28807781 diff --git a/brca/chief/pt_files/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D.pt b/brca/chief/pt_files/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D.pt new file mode 100644 index 0000000000000000000000000000000000000000..bf400af058892f6803412bb26cd59d0d7f3a7c11 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A7-A0CD-01Z-00-DX1.F045B9C8-049C-41BF-8432-EF89F236D34D.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ffd4f98bc783974a717fdc728f5fac163cd4affa899e8b82c25516dbde06c7ee +size 6354533 diff --git a/brca/chief/pt_files/TCGA-A7-A0CE-01Z-00-DX2.5AD1DB65-10E7-4996-AB5E-13D7851EC5FA.pt b/brca/chief/pt_files/TCGA-A7-A0CE-01Z-00-DX2.5AD1DB65-10E7-4996-AB5E-13D7851EC5FA.pt new file mode 100644 index 0000000000000000000000000000000000000000..1a14e75bf1e611c956012bdd2ae36e499c484e12 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A7-A0CE-01Z-00-DX2.5AD1DB65-10E7-4996-AB5E-13D7851EC5FA.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:9ea33a8585057c40bee2b3d311ec73878999e157ccbefa0db44125e46522594c +size 23397989 diff --git a/brca/chief/pt_files/TCGA-A7-A13D-01Z-00-DX1.D206783C-FA6A-4B6A-B3AA-4132A2C9626B.pt b/brca/chief/pt_files/TCGA-A7-A13D-01Z-00-DX1.D206783C-FA6A-4B6A-B3AA-4132A2C9626B.pt new file mode 100644 index 0000000000000000000000000000000000000000..00b6066d2cc5136b1c0fe69bbdc744d3b597a5a9 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A7-A13D-01Z-00-DX1.D206783C-FA6A-4B6A-B3AA-4132A2C9626B.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cf4d696ec3f10c4cd2ddff4e7c0b0a125b612945e9526d6cb2c97dcc5961c436 +size 14781029 diff --git a/brca/chief/pt_files/TCGA-A7-A13E-01Z-00-DX1.891954FF-316A-4562-AA14-429631944F22.pt b/brca/chief/pt_files/TCGA-A7-A13E-01Z-00-DX1.891954FF-316A-4562-AA14-429631944F22.pt new file mode 100644 index 0000000000000000000000000000000000000000..ccf8f94adec0f6c1c697b84b5672fbc781619cfc --- /dev/null +++ b/brca/chief/pt_files/TCGA-A7-A13E-01Z-00-DX1.891954FF-316A-4562-AA14-429631944F22.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ace6d2720236a158ec5367bc9b016e52c782349a4ff204f25f53a60b2f8fc5d0 +size 10492517 diff --git a/brca/chief/pt_files/TCGA-A8-A06Y-01Z-00-DX1.3BC58446-524E-43F3-AAE6-FBC4AA543E66.pt b/brca/chief/pt_files/TCGA-A8-A06Y-01Z-00-DX1.3BC58446-524E-43F3-AAE6-FBC4AA543E66.pt new file mode 100644 index 0000000000000000000000000000000000000000..7be303fad4ec95bab87b5cbf04c12b675124f3b8 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A8-A06Y-01Z-00-DX1.3BC58446-524E-43F3-AAE6-FBC4AA543E66.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:dec5cbe723c97a3448cb76aa63c50451b950a2744b7ab8e8f0a9dde9b227ec35 +size 5700197 diff --git a/brca/chief/pt_files/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3.pt b/brca/chief/pt_files/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3.pt new file mode 100644 index 0000000000000000000000000000000000000000..1167f454eb74fc41f716a37def44c5569f5faa87 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A8-A085-01Z-00-DX1.0DA29016-AEA4-4E5F-B679-83095A79F5B3.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c0119fb0b96f17715fe512090ccf929c257a2882502941e9f74fa37af460fa50 +size 9939557 diff --git a/brca/chief/pt_files/TCGA-A8-A08J-01Z-00-DX1.4607286A-033B-4C44-8306-50DB9C596166.pt b/brca/chief/pt_files/TCGA-A8-A08J-01Z-00-DX1.4607286A-033B-4C44-8306-50DB9C596166.pt new file mode 100644 index 0000000000000000000000000000000000000000..d88e11922df573da2647e693c7605aa91e70b232 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A8-A08J-01Z-00-DX1.4607286A-033B-4C44-8306-50DB9C596166.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:2a4fee596289b5b7550246d860fbe542ad25d49f63117e1696aed4117f3af888 +size 10169957 diff --git a/brca/chief/pt_files/TCGA-A8-A08R-01Z-00-DX1.72FBD9A3-5EB9-4855-89EB-697883C2EA9B.pt b/brca/chief/pt_files/TCGA-A8-A08R-01Z-00-DX1.72FBD9A3-5EB9-4855-89EB-697883C2EA9B.pt new file mode 100644 index 0000000000000000000000000000000000000000..7b4962a370350f56c96a2412f017ed3674393101 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A8-A08R-01Z-00-DX1.72FBD9A3-5EB9-4855-89EB-697883C2EA9B.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:414b7b0d494db108ec7227a8b64d3b626ea8313da11cbc566e75c8f3846ddb7f +size 2895461 diff --git a/brca/chief/pt_files/TCGA-A8-A08S-01Z-00-DX1.C0E044C2-FC3F-4E3D-A779-A725FF375F21.pt b/brca/chief/pt_files/TCGA-A8-A08S-01Z-00-DX1.C0E044C2-FC3F-4E3D-A779-A725FF375F21.pt new file mode 100644 index 0000000000000000000000000000000000000000..31c1e3c7d1ebe4c26130057df0357a71cc598c05 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A8-A08S-01Z-00-DX1.C0E044C2-FC3F-4E3D-A779-A725FF375F21.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:4a16b123c7460f33570fbf1ebc9ba5c60149c6a25696884dbc30914d1239eeec +size 6489701 diff --git a/brca/chief/pt_files/TCGA-A8-A09B-01Z-00-DX1.97CCDA89-AB73-4F05-A900-668160227B78.pt b/brca/chief/pt_files/TCGA-A8-A09B-01Z-00-DX1.97CCDA89-AB73-4F05-A900-668160227B78.pt new file mode 100644 index 0000000000000000000000000000000000000000..2fb827a4d73c986cc0e1c6147c8ef28e8d5fb6bd --- /dev/null +++ b/brca/chief/pt_files/TCGA-A8-A09B-01Z-00-DX1.97CCDA89-AB73-4F05-A900-668160227B78.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c24527c46192a3db874d0b8ec86e476e3f16a5fd2d2a111135349d5ce0152470 +size 8802917 diff --git a/brca/chief/pt_files/TCGA-A8-A0A9-01Z-00-DX1.16524DDD-539D-4E47-9A8F-1B910D4FEC2D.pt b/brca/chief/pt_files/TCGA-A8-A0A9-01Z-00-DX1.16524DDD-539D-4E47-9A8F-1B910D4FEC2D.pt new file mode 100644 index 0000000000000000000000000000000000000000..7bc68a260ac59b3538339d575c73634b34e66fd8 --- /dev/null +++ b/brca/chief/pt_files/TCGA-A8-A0A9-01Z-00-DX1.16524DDD-539D-4E47-9A8F-1B910D4FEC2D.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:dc6b306a10f57d9fc610a230c282e5c894e62a296448d63235a92206619d4757 +size 4720229 diff --git a/brca/chief/pt_files/TCGA-AC-A5EI-01Z-00-DX1.A174D91A-730E-460C-AE73-46CA1E5B177B.pt b/brca/chief/pt_files/TCGA-AC-A5EI-01Z-00-DX1.A174D91A-730E-460C-AE73-46CA1E5B177B.pt new file mode 100644 index 0000000000000000000000000000000000000000..45f10c20c6503d3420714ed5802139152d2a26ef --- /dev/null +++ b/brca/chief/pt_files/TCGA-AC-A5EI-01Z-00-DX1.A174D91A-730E-460C-AE73-46CA1E5B177B.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:0f10465be1e31aaf89c696773a87db1e01adc3d6eacc891e8bb134db68707fab +size 31225445 diff --git a/brca/chief/pt_files/TCGA-AC-A62V-01Z-00-DX1.2D8994FD-58B8-43C1-B99D-AA964E7DFD60.pt b/brca/chief/pt_files/TCGA-AC-A62V-01Z-00-DX1.2D8994FD-58B8-43C1-B99D-AA964E7DFD60.pt new file mode 100644 index 0000000000000000000000000000000000000000..be182e56d728d5ac117ce10ff0eb5345495a916d --- /dev/null +++ b/brca/chief/pt_files/TCGA-AC-A62V-01Z-00-DX1.2D8994FD-58B8-43C1-B99D-AA964E7DFD60.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f1f8e5ebcac4aa9ae16f629a02f8f694592dd4fdea7636b11e89fa6b6133bf45 +size 3641957 diff --git a/brca/chief/pt_files/TCGA-AC-A8OQ-01Z-00-DX1.15946A44-711C-4765-AB46-5CFB7BD11E42.pt b/brca/chief/pt_files/TCGA-AC-A8OQ-01Z-00-DX1.15946A44-711C-4765-AB46-5CFB7BD11E42.pt new file mode 100644 index 0000000000000000000000000000000000000000..911d0ac33d9a52dff6f41e9fb1a62106464d2b17 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AC-A8OQ-01Z-00-DX1.15946A44-711C-4765-AB46-5CFB7BD11E42.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:97d1fe4301b5f385ffd008207631dd24a6ff3cf5c6a0d46b775b256d36c19ffd +size 16403045 diff --git a/brca/chief/pt_files/TCGA-AN-A0XL-01Z-00-DX1.E90AA056-51DC-4A6B-96EB-A0B707496912.pt b/brca/chief/pt_files/TCGA-AN-A0XL-01Z-00-DX1.E90AA056-51DC-4A6B-96EB-A0B707496912.pt new file mode 100644 index 0000000000000000000000000000000000000000..200931c780f81302b1c6194272caa6dbc2e41cea --- /dev/null +++ b/brca/chief/pt_files/TCGA-AN-A0XL-01Z-00-DX1.E90AA056-51DC-4A6B-96EB-A0B707496912.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a0cb8890c1d91e6e4c24d420dd05a226122707936f6c1e6288c0a7aef3459b5a +size 19112549 diff --git a/brca/chief/pt_files/TCGA-AN-A0XN-01Z-00-DX1.A8EB9F62-236E-4C59-A206-DF0C7654AC30.pt b/brca/chief/pt_files/TCGA-AN-A0XN-01Z-00-DX1.A8EB9F62-236E-4C59-A206-DF0C7654AC30.pt new file mode 100644 index 0000000000000000000000000000000000000000..055f5376d732f687a97652079abfa7519fe3edc0 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AN-A0XN-01Z-00-DX1.A8EB9F62-236E-4C59-A206-DF0C7654AC30.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a465933a464c061bb90e5a550cb203292e6c4438ed8ccacdab317b0bbe31de4e +size 18298469 diff --git a/brca/chief/pt_files/TCGA-AO-A03N-01Z-00-DX1.79A8816D-961F-4D79-90B4-341919297A90.pt b/brca/chief/pt_files/TCGA-AO-A03N-01Z-00-DX1.79A8816D-961F-4D79-90B4-341919297A90.pt new file mode 100644 index 0000000000000000000000000000000000000000..1b918fc4a7c21962c1ffe92cbd50d265e7aa68b4 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AO-A03N-01Z-00-DX1.79A8816D-961F-4D79-90B4-341919297A90.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a492e5f2d3e8f9235fb5a62f360009afa1359b0826106a1fa0ed517493933554 +size 15997541 diff --git a/brca/chief/pt_files/TCGA-AO-A0J4-01Z-00-DX1.2EFC978E-8DF5-4254-9598-C0910B17C5C8.pt b/brca/chief/pt_files/TCGA-AO-A0J4-01Z-00-DX1.2EFC978E-8DF5-4254-9598-C0910B17C5C8.pt new file mode 100644 index 0000000000000000000000000000000000000000..018dfa0d7a12889d29a68183c07cfbb20394c558 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AO-A0J4-01Z-00-DX1.2EFC978E-8DF5-4254-9598-C0910B17C5C8.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:42f5de74f7c92543b8a46ac0777562fb0356b0f919c47294e70f1445a24fe8df +size 9153125 diff --git a/brca/chief/pt_files/TCGA-AO-A0JL-01Z-00-DX1.473CC200-221A-4777-B19E-ADC41D10FC94.pt b/brca/chief/pt_files/TCGA-AO-A0JL-01Z-00-DX1.473CC200-221A-4777-B19E-ADC41D10FC94.pt new file mode 100644 index 0000000000000000000000000000000000000000..47aff4d8e4e8663dbdf96e760211959cc9ca3b9a --- /dev/null +++ b/brca/chief/pt_files/TCGA-AO-A0JL-01Z-00-DX1.473CC200-221A-4777-B19E-ADC41D10FC94.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:502c922abfc3df5cb6f1b9c69375dd3a1ee18b4ac543a64cf185e89679e24365 +size 13632101 diff --git a/brca/chief/pt_files/TCGA-AO-A12A-01Z-00-DX1.4E9609A7-9AAD-40A8-8344-8369DF998006.pt b/brca/chief/pt_files/TCGA-AO-A12A-01Z-00-DX1.4E9609A7-9AAD-40A8-8344-8369DF998006.pt new file mode 100644 index 0000000000000000000000000000000000000000..03f9856bbb116e4f2260fdfa2563338b26859707 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AO-A12A-01Z-00-DX1.4E9609A7-9AAD-40A8-8344-8369DF998006.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:50f987ca63f6141f76914af59d5985119879f491ec9e2d041878ac9fcd6e72cc +size 21035621 diff --git a/brca/chief/pt_files/TCGA-AO-A1KQ-01Z-00-DX1.CAB7D9A5-7030-4A33-BE51-9B04D67A7676.pt b/brca/chief/pt_files/TCGA-AO-A1KQ-01Z-00-DX1.CAB7D9A5-7030-4A33-BE51-9B04D67A7676.pt new file mode 100644 index 0000000000000000000000000000000000000000..142f24f9ead105bb1bca751d5820bb9d3b19a1b2 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AO-A1KQ-01Z-00-DX1.CAB7D9A5-7030-4A33-BE51-9B04D67A7676.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c11607b0ca419dd20636d566d79c1848c88018144b5dd590cd053c21a688370a +size 9561701 diff --git a/brca/chief/pt_files/TCGA-AQ-A04J-01Z-00-DX1.6A4E16D4-2696-4E5F-BCA8-708556FC3A8C.pt b/brca/chief/pt_files/TCGA-AQ-A04J-01Z-00-DX1.6A4E16D4-2696-4E5F-BCA8-708556FC3A8C.pt new file mode 100644 index 0000000000000000000000000000000000000000..da67a5cbb6abf2c14ac662aa5ab6890af90f2b54 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AQ-A04J-01Z-00-DX1.6A4E16D4-2696-4E5F-BCA8-708556FC3A8C.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f2e5571b1070ae21749ec9a55c7017d657640b054aa113ec03fda8dba1d418cc +size 31772261 diff --git a/brca/chief/pt_files/TCGA-AR-A1AL-01Z-00-DX1.0970370F-6D4B-449A-AF33-76355DD99F91.pt b/brca/chief/pt_files/TCGA-AR-A1AL-01Z-00-DX1.0970370F-6D4B-449A-AF33-76355DD99F91.pt new file mode 100644 index 0000000000000000000000000000000000000000..23dff727684102bee2d52c7fcdfdbfbed3e87493 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AR-A1AL-01Z-00-DX1.0970370F-6D4B-449A-AF33-76355DD99F91.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:8aaace7ccd52a9127967fa9955eae2058d22631afd9ac6b8d8b0da2b7fd0c326 +size 24036965 diff --git a/brca/chief/pt_files/TCGA-AR-A1AM-01Z-00-DX1.B3F006D9-9386-41E5-B0B1-B0832EE104A0.pt b/brca/chief/pt_files/TCGA-AR-A1AM-01Z-00-DX1.B3F006D9-9386-41E5-B0B1-B0832EE104A0.pt new file mode 100644 index 0000000000000000000000000000000000000000..d8c7efdd01843fe0dd9c37f4ab102d61df415f54 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AR-A1AM-01Z-00-DX1.B3F006D9-9386-41E5-B0B1-B0832EE104A0.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:675a1d04c393db18e5494744009388e6eb75aeb1c8bd784eb16848544bf904e9 +size 8538725 diff --git a/brca/chief/pt_files/TCGA-AR-A1AP-01Z-00-DX1.F163EED5-0385-41AA-BA35-54E4910CD99E.pt b/brca/chief/pt_files/TCGA-AR-A1AP-01Z-00-DX1.F163EED5-0385-41AA-BA35-54E4910CD99E.pt new file mode 100644 index 0000000000000000000000000000000000000000..f93feb72167fa741a5d11556940394cd764836c3 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AR-A1AP-01Z-00-DX1.F163EED5-0385-41AA-BA35-54E4910CD99E.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:4e31c054a81c65ae620845942b5c2fddc4db674f0d42d3537b5854597aa4fb09 +size 28009061 diff --git a/brca/chief/pt_files/TCGA-AR-A1AX-01Z-00-DX1.2389D54F-545E-499E-B392-DD731834460A.pt b/brca/chief/pt_files/TCGA-AR-A1AX-01Z-00-DX1.2389D54F-545E-499E-B392-DD731834460A.pt new file mode 100644 index 0000000000000000000000000000000000000000..885f94837eca073d7039e58ca88031bdba848d80 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AR-A1AX-01Z-00-DX1.2389D54F-545E-499E-B392-DD731834460A.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f5c84bbfdaa553bcec10259b301a512aeddf4e66c9f1ea39c1bcaca0811f485a +size 26294885 diff --git a/brca/chief/pt_files/TCGA-AR-A24R-01Z-00-DX1.47D79205-63E7-43E6-A513-2CD10DFA53C9.pt b/brca/chief/pt_files/TCGA-AR-A24R-01Z-00-DX1.47D79205-63E7-43E6-A513-2CD10DFA53C9.pt new file mode 100644 index 0000000000000000000000000000000000000000..6ff719e6123a885687208ab404a02141d8e2cc3a --- /dev/null +++ b/brca/chief/pt_files/TCGA-AR-A24R-01Z-00-DX1.47D79205-63E7-43E6-A513-2CD10DFA53C9.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:21ce2a6c424ebb96cc7798b51bbaa70913afb93bc605dadc0795e5d448172fec +size 40134245 diff --git a/brca/chief/pt_files/TCGA-AR-A24U-01Z-00-DX1.220FD0D0-0DB6-4E3C-92A0-66CD6509F0AD.pt b/brca/chief/pt_files/TCGA-AR-A24U-01Z-00-DX1.220FD0D0-0DB6-4E3C-92A0-66CD6509F0AD.pt new file mode 100644 index 0000000000000000000000000000000000000000..49953d1f4baa0ffb4ac82f1b579be4bb221ec847 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AR-A24U-01Z-00-DX1.220FD0D0-0DB6-4E3C-92A0-66CD6509F0AD.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:54c8f208e6191cd804030ef664fd0710447f14e088bf2e457026f30c81286b00 +size 30279269 diff --git a/brca/chief/pt_files/TCGA-AR-A255-01Z-00-DX1.E67C081D-50C9-451C-814B-F097B2671300.pt b/brca/chief/pt_files/TCGA-AR-A255-01Z-00-DX1.E67C081D-50C9-451C-814B-F097B2671300.pt new file mode 100644 index 0000000000000000000000000000000000000000..597a1d85e099072a29cab89b8e8b03b17c5c7ba2 --- /dev/null +++ b/brca/chief/pt_files/TCGA-AR-A255-01Z-00-DX1.E67C081D-50C9-451C-814B-F097B2671300.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:9cb92b2dfb3bc62253981b644da769fb5ff4d66a0dab8fbc225bebe00b3375e0 +size 8425061 diff --git a/brca/chief/pt_files/TCGA-AR-A2LH-01Z-00-DX1.40D4FD67-FB13-46D9-A202-56A5791EA11C.pt b/brca/chief/pt_files/TCGA-AR-A2LH-01Z-00-DX1.40D4FD67-FB13-46D9-A202-56A5791EA11C.pt new file mode 100644 index 0000000000000000000000000000000000000000..8122c5c2e317d780b0fdf9ef049ff7d486f8ba7c --- /dev/null +++ b/brca/chief/pt_files/TCGA-AR-A2LH-01Z-00-DX1.40D4FD67-FB13-46D9-A202-56A5791EA11C.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:845554f6ab37f88d4175c0c6dab124ec95eb00dd98efc8b6b3518f14250a2ada +size 55807589 diff --git a/brca/chief/pt_files/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC.pt b/brca/chief/pt_files/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC.pt new file mode 100644 index 0000000000000000000000000000000000000000..cc018a58aac4aadfb16b143ccc9d6fc9e5792d7f --- /dev/null +++ b/brca/chief/pt_files/TCGA-AR-A5QN-01Z-00-DX1.BF92AA24-3D44-4FFA-BCC0-CDB934EC3BBC.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:0b5c73eb429a5bd991459c5a7bcaf94df7faef55ca872bc3e041490ac14c44ef +size 33286757 diff --git a/brca/chief/pt_files/TCGA-B6-A0I1-01Z-00-DX1.86BEC5E4-A2D1-4039-8D08-0598FA8BCC2B.pt b/brca/chief/pt_files/TCGA-B6-A0I1-01Z-00-DX1.86BEC5E4-A2D1-4039-8D08-0598FA8BCC2B.pt new file mode 100644 index 0000000000000000000000000000000000000000..4907079da58654ccdcceefc876c361dd80ed811e --- /dev/null +++ b/brca/chief/pt_files/TCGA-B6-A0I1-01Z-00-DX1.86BEC5E4-A2D1-4039-8D08-0598FA8BCC2B.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f38c58a658f637c63fce293b3f76730f477aed9ae3c1989b7dfce1c39b70ffff +size 50901605 diff --git a/brca/chief/pt_files/TCGA-B6-A0RS-01Z-00-DX1.F72B766D-FC49-4876-A93D-D88B05702267.pt b/brca/chief/pt_files/TCGA-B6-A0RS-01Z-00-DX1.F72B766D-FC49-4876-A93D-D88B05702267.pt new file mode 100644 index 0000000000000000000000000000000000000000..41c56a7ae057ca457c0f2df0645635caa56a3663 --- /dev/null +++ b/brca/chief/pt_files/TCGA-B6-A0RS-01Z-00-DX1.F72B766D-FC49-4876-A93D-D88B05702267.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ca033b24237f538b1fc5cc14c2b5f17b7447fedc8e82c151e55dde48a17a976e +size 69161573 diff --git a/brca/chief/pt_files/TCGA-B6-A0RV-01Z-00-DX1.C46C2937-868D-47B7-B9B9-E51F5433BE97.pt b/brca/chief/pt_files/TCGA-B6-A0RV-01Z-00-DX1.C46C2937-868D-47B7-B9B9-E51F5433BE97.pt new file mode 100644 index 0000000000000000000000000000000000000000..ffe13375393b2d8e39f6ea800ead795e1f2e9888 --- /dev/null +++ b/brca/chief/pt_files/TCGA-B6-A0RV-01Z-00-DX1.C46C2937-868D-47B7-B9B9-E51F5433BE97.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d5729d997f756756c2e9c04f60745cf6e2da9c5065de9dd340cfc9f4f7f72240 +size 83990117 diff --git a/brca/chief/pt_files/TCGA-B6-A0X0-01Z-00-DX1.5D67D9D5-C2F0-40BE-A661-E25B6A6287A2.pt b/brca/chief/pt_files/TCGA-B6-A0X0-01Z-00-DX1.5D67D9D5-C2F0-40BE-A661-E25B6A6287A2.pt new file mode 100644 index 0000000000000000000000000000000000000000..603aad73666465c66c5169ab137461948d0bedd7 --- /dev/null +++ b/brca/chief/pt_files/TCGA-B6-A0X0-01Z-00-DX1.5D67D9D5-C2F0-40BE-A661-E25B6A6287A2.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cea65ca8ef6bc371deeb50868f017b117841d0be598429277ae926f573a144cb +size 48370277 diff --git a/brca/chief/pt_files/TCGA-BH-A0DG-01Z-00-DX1.D3C4F57F-608F-46AA-A978-B558117C9DFB.pt b/brca/chief/pt_files/TCGA-BH-A0DG-01Z-00-DX1.D3C4F57F-608F-46AA-A978-B558117C9DFB.pt new file mode 100644 index 0000000000000000000000000000000000000000..a4e04e3e0ec4a6bc466214755745b3baf5e382dc --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0DG-01Z-00-DX1.D3C4F57F-608F-46AA-A978-B558117C9DFB.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:011f25571545e0e37694b424d6c01c44ddbf801851600dbd7d4c0ddb29cb8ce8 +size 54578789 diff --git a/brca/chief/pt_files/TCGA-BH-A0DH-01Z-00-DX1.968AA1FD-068C-4B90-8C95-85BF2EFC3E3F.pt b/brca/chief/pt_files/TCGA-BH-A0DH-01Z-00-DX1.968AA1FD-068C-4B90-8C95-85BF2EFC3E3F.pt new file mode 100644 index 0000000000000000000000000000000000000000..fec085710e2f09e7183ad9d4cd92d1daa4debcf7 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0DH-01Z-00-DX1.968AA1FD-068C-4B90-8C95-85BF2EFC3E3F.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:2bf5f6a9a53a383cf41cab76c1e6f3a66da785c4a99ede46ac58b899b42427d2 +size 38478437 diff --git a/brca/chief/pt_files/TCGA-BH-A0DI-01Z-00-DX1.6A42D535-8842-4C36-8299-A40E9E56759D.pt b/brca/chief/pt_files/TCGA-BH-A0DI-01Z-00-DX1.6A42D535-8842-4C36-8299-A40E9E56759D.pt new file mode 100644 index 0000000000000000000000000000000000000000..7a4b7a42e715362bc3f711bb850dae60c73e7517 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0DI-01Z-00-DX1.6A42D535-8842-4C36-8299-A40E9E56759D.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ee30c64b7576714b4121563360038d70c1264da8efadb8e98b88e9206e932596 +size 43688549 diff --git a/brca/chief/pt_files/TCGA-BH-A0DS-01Z-00-DX1.38E82A1F-21B9-4B97-A304-15B886EA68A0.pt b/brca/chief/pt_files/TCGA-BH-A0DS-01Z-00-DX1.38E82A1F-21B9-4B97-A304-15B886EA68A0.pt new file mode 100644 index 0000000000000000000000000000000000000000..9ec60eeadca0efc151a397da8515273d065f25ec --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0DS-01Z-00-DX1.38E82A1F-21B9-4B97-A304-15B886EA68A0.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:63147448b24372376ec05ed3b721ab7a2e1679cbe6e1771787c15ca89c77ac8d +size 26291813 diff --git a/brca/chief/pt_files/TCGA-BH-A0E2-01Z-00-DX1.5F6FA19C-D59F-45BE-80CE-F738CAB1EF0B.pt b/brca/chief/pt_files/TCGA-BH-A0E2-01Z-00-DX1.5F6FA19C-D59F-45BE-80CE-F738CAB1EF0B.pt new file mode 100644 index 0000000000000000000000000000000000000000..18ec11b471eda1af4771ad1241f84901c625e04d --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0E2-01Z-00-DX1.5F6FA19C-D59F-45BE-80CE-F738CAB1EF0B.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:09f4babed2ae61ec882f0d80f76fc23c5a6e4ba27713cbebc09a9407841f1c5b +size 43958885 diff --git a/brca/chief/pt_files/TCGA-BH-A0E9-01Z-00-DX1.5FC4A5E1-3984-4869-9FFB-C0C7F9EAF5FE.pt b/brca/chief/pt_files/TCGA-BH-A0E9-01Z-00-DX1.5FC4A5E1-3984-4869-9FFB-C0C7F9EAF5FE.pt new file mode 100644 index 0000000000000000000000000000000000000000..849241993b187e86ee79cbb661315f7aaaa7f3bd --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0E9-01Z-00-DX1.5FC4A5E1-3984-4869-9FFB-C0C7F9EAF5FE.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b605097be759d9bdc3361ed6d08e658ec7b463a205f7820ec7a8258e9f62e58f +size 55890533 diff --git a/brca/chief/pt_files/TCGA-BH-A0H6-01Z-00-DX1.0CF7253A-B42C-4778-B1C6-17EC78A039ED.pt b/brca/chief/pt_files/TCGA-BH-A0H6-01Z-00-DX1.0CF7253A-B42C-4778-B1C6-17EC78A039ED.pt new file mode 100644 index 0000000000000000000000000000000000000000..7baa3ffec0ad8918d51a14a813b16feb21635707 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0H6-01Z-00-DX1.0CF7253A-B42C-4778-B1C6-17EC78A039ED.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:3f94119237eb1d095b181a337dbec2ab4fa0326a30f62c148e595c5684363b2e +size 17426021 diff --git a/brca/chief/pt_files/TCGA-BH-A0H7-01Z-00-DX1.21502FEA-DB37-4630-BA42-778DDF3A6D17.pt b/brca/chief/pt_files/TCGA-BH-A0H7-01Z-00-DX1.21502FEA-DB37-4630-BA42-778DDF3A6D17.pt new file mode 100644 index 0000000000000000000000000000000000000000..92d180bbaa982b802599c04b3e5600a1a9f5e642 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0H7-01Z-00-DX1.21502FEA-DB37-4630-BA42-778DDF3A6D17.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:14f4cceee1f2f4929a2a19c9c568b07e833fd0a844ba69f55ad58c5f3c4f8e28 +size 61119077 diff --git a/brca/chief/pt_files/TCGA-BH-A0HF-01Z-00-DX1.1EB2F7CE-54F4-4E41-A3CF-78209770B7CE.pt b/brca/chief/pt_files/TCGA-BH-A0HF-01Z-00-DX1.1EB2F7CE-54F4-4E41-A3CF-78209770B7CE.pt new file mode 100644 index 0000000000000000000000000000000000000000..3f880c0dc91247c094d0d32548e2bfd7c558f060 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0HF-01Z-00-DX1.1EB2F7CE-54F4-4E41-A3CF-78209770B7CE.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6fb7af7a838aef9c7bc83eb0902a6233816e82bf32d43432d381890f3763df42 +size 16685669 diff --git a/brca/chief/pt_files/TCGA-BH-A0HN-01Z-00-DX1.4997F641-C593-41F6-82ED-6A0E4EFA55F3.pt b/brca/chief/pt_files/TCGA-BH-A0HN-01Z-00-DX1.4997F641-C593-41F6-82ED-6A0E4EFA55F3.pt new file mode 100644 index 0000000000000000000000000000000000000000..a96bc45f25dbf2b3637dca3aa2766bfa69c45087 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0HN-01Z-00-DX1.4997F641-C593-41F6-82ED-6A0E4EFA55F3.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:de9d30462f19b2d041babb2115a8e40285c2e90323aa3ef85ec54863c1fd04f0 +size 45203045 diff --git a/brca/chief/pt_files/TCGA-BH-A0HO-01Z-00-DX1.D3D66547-F5D4-40F5-B737-2FECEEB35ACB.pt b/brca/chief/pt_files/TCGA-BH-A0HO-01Z-00-DX1.D3D66547-F5D4-40F5-B737-2FECEEB35ACB.pt new file mode 100644 index 0000000000000000000000000000000000000000..fd6792c870974346f9b6aaf040c3c5fb4bca0e44 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0HO-01Z-00-DX1.D3D66547-F5D4-40F5-B737-2FECEEB35ACB.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:9e4fc90bf160ba38585760499f894722da71690f579c3d29bf87c0ae95490cd5 +size 41421413 diff --git a/brca/chief/pt_files/TCGA-BH-A0HY-01Z-00-DX1.D7A1BF42-F268-4220-B71B-354CE2AF32D8.pt b/brca/chief/pt_files/TCGA-BH-A0HY-01Z-00-DX1.D7A1BF42-F268-4220-B71B-354CE2AF32D8.pt new file mode 100644 index 0000000000000000000000000000000000000000..e97c8aea1b112058e6dcee31f30f3fa4ac3bb083 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A0HY-01Z-00-DX1.D7A1BF42-F268-4220-B71B-354CE2AF32D8.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:8f0e1a4d31e0f5e6c25101ab524496b0466cf96bbbfb9907684583d4ed119dcf +size 50554469 diff --git a/brca/chief/pt_files/TCGA-BH-A18R-01Z-00-DX1.07E6FA7F-5072-4327-9982-A40F010B7532.pt b/brca/chief/pt_files/TCGA-BH-A18R-01Z-00-DX1.07E6FA7F-5072-4327-9982-A40F010B7532.pt new file mode 100644 index 0000000000000000000000000000000000000000..675b54564360db1636bd0b3f062fcc9c111c9be4 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A18R-01Z-00-DX1.07E6FA7F-5072-4327-9982-A40F010B7532.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:3bc81a856417be7e33e4dd6f8117126cb497c8d9d715498150f9a4f6acb9bc7b +size 59106917 diff --git a/brca/chief/pt_files/TCGA-BH-A18S-01Z-00-DX1.B36FC684-0010-4ABB-9E25-303C8DF1C4E2.pt b/brca/chief/pt_files/TCGA-BH-A18S-01Z-00-DX1.B36FC684-0010-4ABB-9E25-303C8DF1C4E2.pt new file mode 100644 index 0000000000000000000000000000000000000000..edef6da301509545c671fc09608a51d96de7d2ed --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A18S-01Z-00-DX1.B36FC684-0010-4ABB-9E25-303C8DF1C4E2.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a08a198d8b67bebce1d45bba8c83b85f5ed3b2f79367568520f42c3e2fe382ac +size 21825125 diff --git a/brca/chief/pt_files/TCGA-BH-A1EN-01Z-00-DX1.F535657F-E2FA-4283-87AE-7DAB663B196B.pt b/brca/chief/pt_files/TCGA-BH-A1EN-01Z-00-DX1.F535657F-E2FA-4283-87AE-7DAB663B196B.pt new file mode 100644 index 0000000000000000000000000000000000000000..e090c1274d8ff2468738d9c61fb4fc7eeca13951 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A1EN-01Z-00-DX1.F535657F-E2FA-4283-87AE-7DAB663B196B.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:2493bb780beed1cf9bd82d86cd1a88f88836f3b46ce59eea22e15eafef7ce287 +size 63976037 diff --git a/brca/chief/pt_files/TCGA-BH-A1FE-01Z-00-DX1.8FB57ECF-350B-44E4-8612-63E8374D3C4B.pt b/brca/chief/pt_files/TCGA-BH-A1FE-01Z-00-DX1.8FB57ECF-350B-44E4-8612-63E8374D3C4B.pt new file mode 100644 index 0000000000000000000000000000000000000000..f000eed455998b76110bfd51689f9f22b492c756 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A1FE-01Z-00-DX1.8FB57ECF-350B-44E4-8612-63E8374D3C4B.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f7353d30cdd76789a31f712651e591dbb070fc0b098edd26b7bfc257beef142f +size 31483493 diff --git a/brca/chief/pt_files/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B.pt b/brca/chief/pt_files/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B.pt new file mode 100644 index 0000000000000000000000000000000000000000..792dc0b2bfbc60b63cdd0e4a722c906219e6a029 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A1FG-01Z-00-DX1.DA665FB6-9DD9-4B18-A925-2EFD9BC4C43B.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6f7f277dd79b35248da246c1a823ff6ed8cda38b05799b825e4a9b86d0a3a118 +size 31074917 diff --git a/brca/chief/pt_files/TCGA-BH-A1FH-01Z-00-DX1.F90A691F-B6DB-4C4A-9975-9A2CB01F29E2.pt b/brca/chief/pt_files/TCGA-BH-A1FH-01Z-00-DX1.F90A691F-B6DB-4C4A-9975-9A2CB01F29E2.pt new file mode 100644 index 0000000000000000000000000000000000000000..4ca5488eef5377d45ec11d55e614c68cc39bac27 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A1FH-01Z-00-DX1.F90A691F-B6DB-4C4A-9975-9A2CB01F29E2.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:680118b86a6204e1d723762a9614f570d5bee9dfb02d21ff5d395bea42b7da0c +size 40423013 diff --git a/brca/chief/pt_files/TCGA-BH-A1FL-01Z-00-DX1.D3E9F46E-9A28-4AAE-8C87-D6F1851227A3.pt b/brca/chief/pt_files/TCGA-BH-A1FL-01Z-00-DX1.D3E9F46E-9A28-4AAE-8C87-D6F1851227A3.pt new file mode 100644 index 0000000000000000000000000000000000000000..c77f7b1d49e4b56c71666c978d065136d88dbd7d --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A1FL-01Z-00-DX1.D3E9F46E-9A28-4AAE-8C87-D6F1851227A3.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:0cd7924b0009371d407327c726de12d60e4953322280fe81f740a7ff03380c7a +size 72341093 diff --git a/brca/chief/pt_files/TCGA-BH-A1FR-01Z-00-DX1.03E51FCD-DDF2-4924-827D-85A02280C9C7.pt b/brca/chief/pt_files/TCGA-BH-A1FR-01Z-00-DX1.03E51FCD-DDF2-4924-827D-85A02280C9C7.pt new file mode 100644 index 0000000000000000000000000000000000000000..12488edb130db020deaad218ff67f35875d751b6 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A1FR-01Z-00-DX1.03E51FCD-DDF2-4924-827D-85A02280C9C7.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:65f236cbe259709b33f64c459007909cf69ebad9a8caa6200b1fdf209567ef06 +size 63023717 diff --git a/brca/chief/pt_files/TCGA-BH-A28O-01Z-00-DX1.B37603E3-BC80-4DDA-B44D-B5F794E3398E.pt b/brca/chief/pt_files/TCGA-BH-A28O-01Z-00-DX1.B37603E3-BC80-4DDA-B44D-B5F794E3398E.pt new file mode 100644 index 0000000000000000000000000000000000000000..bdf7a966f4e68994cca91047caa2d58317dd9a82 --- /dev/null +++ b/brca/chief/pt_files/TCGA-BH-A28O-01Z-00-DX1.B37603E3-BC80-4DDA-B44D-B5F794E3398E.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:1308353a25b9ddb67d0f80b15982214f88548bf2420fb75bd4c3fdd1e9d5999d +size 51801701 diff --git a/brca/chief/pt_files/TCGA-C8-A12W-01Z-00-DX1.3727E7BB-831E-42DB-B5CB-F2D7C649290F.pt b/brca/chief/pt_files/TCGA-C8-A12W-01Z-00-DX1.3727E7BB-831E-42DB-B5CB-F2D7C649290F.pt new file mode 100644 index 0000000000000000000000000000000000000000..5dc6bf3400770850dcfed29ef2f9dd91d524798d --- /dev/null +++ b/brca/chief/pt_files/TCGA-C8-A12W-01Z-00-DX1.3727E7BB-831E-42DB-B5CB-F2D7C649290F.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f9f43f83cdf6953f19dee6454f176dbde51a6e14644b0f9142d0ecec43b0927d +size 31941221 diff --git a/brca/chief/pt_files/TCGA-C8-A133-01Z-00-DX1.AFEE2057-2793-49E4-A477-E0DE3F6C67F9.pt b/brca/chief/pt_files/TCGA-C8-A133-01Z-00-DX1.AFEE2057-2793-49E4-A477-E0DE3F6C67F9.pt new file mode 100644 index 0000000000000000000000000000000000000000..ab5c7e1079dcb7255fc108bfa0201ba6ee9de56f --- /dev/null +++ b/brca/chief/pt_files/TCGA-C8-A133-01Z-00-DX1.AFEE2057-2793-49E4-A477-E0DE3F6C67F9.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:496cda05a7a75f1c06fb64a265b57553b298bdde3576300a3afcdf1cd1e8c0e1 +size 32494181 diff --git a/brca/chief/pt_files/TCGA-C8-A1HK-01Z-00-DX1.A15F452B-1260-4106-86D1-05F00082F0CE.pt b/brca/chief/pt_files/TCGA-C8-A1HK-01Z-00-DX1.A15F452B-1260-4106-86D1-05F00082F0CE.pt new file mode 100644 index 0000000000000000000000000000000000000000..f7efe4c9dab38a9e88bcbfb558f68779164b7fc4 --- /dev/null +++ b/brca/chief/pt_files/TCGA-C8-A1HK-01Z-00-DX1.A15F452B-1260-4106-86D1-05F00082F0CE.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b994e9bb8cecd798fa5cd57f8ac4b849ee58074bf65256a925ea562b6778dbfd +size 30334565 diff --git a/brca/chief/pt_files/TCGA-C8-A26Y-01Z-00-DX1.166EE604-4EF3-401D-99E9-3A9711316CC4.pt b/brca/chief/pt_files/TCGA-C8-A26Y-01Z-00-DX1.166EE604-4EF3-401D-99E9-3A9711316CC4.pt new file mode 100644 index 0000000000000000000000000000000000000000..821f9292949062d018edbbedfd329fb8152f62ce --- /dev/null +++ b/brca/chief/pt_files/TCGA-C8-A26Y-01Z-00-DX1.166EE604-4EF3-401D-99E9-3A9711316CC4.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:4137eea9d175e61db13e5bd1b4e32ec8c814a0e547d376275c6245b1cbc37105 +size 19576421 diff --git a/brca/chief/pt_files/TCGA-C8-A3M7-01Z-00-DX1.846C75F1-2E7E-44F7-B21F-C246141558FA.pt b/brca/chief/pt_files/TCGA-C8-A3M7-01Z-00-DX1.846C75F1-2E7E-44F7-B21F-C246141558FA.pt new file mode 100644 index 0000000000000000000000000000000000000000..8818330fcd4f673e5f1ad1a7a58fa12a48100839 --- /dev/null +++ b/brca/chief/pt_files/TCGA-C8-A3M7-01Z-00-DX1.846C75F1-2E7E-44F7-B21F-C246141558FA.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d88e757aa6d03770b5ef71cdd0182b4b4bea91ab1c7616372e2d66223efbb741 +size 55085669 diff --git a/brca/chief/pt_files/TCGA-D8-A141-01Z-00-DX2.DBD0D81E-28FC-4466-BDE3-94753BD6CBEB.pt b/brca/chief/pt_files/TCGA-D8-A141-01Z-00-DX2.DBD0D81E-28FC-4466-BDE3-94753BD6CBEB.pt new file mode 100644 index 0000000000000000000000000000000000000000..8861bc0c5019f47bd84e229b8db2713175c63a55 --- /dev/null +++ b/brca/chief/pt_files/TCGA-D8-A141-01Z-00-DX2.DBD0D81E-28FC-4466-BDE3-94753BD6CBEB.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fdb491b5ef8be7b15158b2e4245cee60fa632901e980ef38291d558bb48ff3c0 +size 25646693 diff --git a/brca/chief/pt_files/TCGA-D8-A145-01Z-00-DX1.34D4EC27-7FD7-4BE2-95A4-CA521CB5590E.pt b/brca/chief/pt_files/TCGA-D8-A145-01Z-00-DX1.34D4EC27-7FD7-4BE2-95A4-CA521CB5590E.pt new file mode 100644 index 0000000000000000000000000000000000000000..2b545fd1ac8fd07dc4815fdc6af29b569db1eee4 --- /dev/null +++ b/brca/chief/pt_files/TCGA-D8-A145-01Z-00-DX1.34D4EC27-7FD7-4BE2-95A4-CA521CB5590E.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:2884397daf9bd8b7ee9a032bbb4c3775df47f6bbd2c1b52a9cf403d41471455c +size 39234149 diff --git a/brca/chief/pt_files/TCGA-D8-A1JD-01Z-00-DX1.6D215B14-DD90-4635-8645-AF06EBD9BA3F.pt b/brca/chief/pt_files/TCGA-D8-A1JD-01Z-00-DX1.6D215B14-DD90-4635-8645-AF06EBD9BA3F.pt new file mode 100644 index 0000000000000000000000000000000000000000..551bfacaf5fc06fc363677839799abf7e678ffa2 --- /dev/null +++ b/brca/chief/pt_files/TCGA-D8-A1JD-01Z-00-DX1.6D215B14-DD90-4635-8645-AF06EBD9BA3F.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:58f98d36e3a9e700a7077f58110efa604653403ac0a82b88b8eac62aff49d8a8 +size 44711525 diff --git a/brca/chief/pt_files/TCGA-D8-A1JT-01Z-00-DX1.F278C419-E405-4BDA-BA50-BFBA08801168.pt b/brca/chief/pt_files/TCGA-D8-A1JT-01Z-00-DX1.F278C419-E405-4BDA-BA50-BFBA08801168.pt new file mode 100644 index 0000000000000000000000000000000000000000..f941060feebb98707d3d82cc3d7cb33b63ea98d8 --- /dev/null +++ b/brca/chief/pt_files/TCGA-D8-A1JT-01Z-00-DX1.F278C419-E405-4BDA-BA50-BFBA08801168.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:77e9c5363da8bf5d9c01bd5509c9b4b0877a5c2c56b49ae8f0a8938bade8e725 +size 38281829 diff --git a/brca/chief/pt_files/TCGA-D8-A1XF-01Z-00-DX1.8B9AB4A1-DEC5-4587-B022-3077CCD220F9.pt b/brca/chief/pt_files/TCGA-D8-A1XF-01Z-00-DX1.8B9AB4A1-DEC5-4587-B022-3077CCD220F9.pt new file mode 100644 index 0000000000000000000000000000000000000000..d65396b70faad55048165409cd7ebde8cc32a280 --- /dev/null +++ b/brca/chief/pt_files/TCGA-D8-A1XF-01Z-00-DX1.8B9AB4A1-DEC5-4587-B022-3077CCD220F9.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:5ac77f4c1b901d4c26d1af08158f95727dfc2befe07a80d7c75a9a8d5dc68554 +size 33351269 diff --git a/brca/chief/pt_files/TCGA-D8-A27K-01Z-00-DX1.25AF7928-046B-45BF-BAD6-F34156203F5A.pt b/brca/chief/pt_files/TCGA-D8-A27K-01Z-00-DX1.25AF7928-046B-45BF-BAD6-F34156203F5A.pt new file mode 100644 index 0000000000000000000000000000000000000000..31222a55b901d4eb582b96d1f72be375d54c4ea1 --- /dev/null +++ b/brca/chief/pt_files/TCGA-D8-A27K-01Z-00-DX1.25AF7928-046B-45BF-BAD6-F34156203F5A.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:12ee77f5029ffa5999adec6c6d9ca47e2f26c16a017d0d093a82c02d6ca37640 +size 41802341 diff --git a/brca/chief/pt_files/TCGA-D8-A27L-01Z-00-DX1.6572593C-B015-4F9A-8C9B-B634CAA0D3B4.pt b/brca/chief/pt_files/TCGA-D8-A27L-01Z-00-DX1.6572593C-B015-4F9A-8C9B-B634CAA0D3B4.pt new file mode 100644 index 0000000000000000000000000000000000000000..4afc1bf68b39b9703a1f5a47ddf7ff06c1b6df09 --- /dev/null +++ b/brca/chief/pt_files/TCGA-D8-A27L-01Z-00-DX1.6572593C-B015-4F9A-8C9B-B634CAA0D3B4.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:994b0218c2e6587d28b95a769c8a30c94916bceaf4e37dfbabb64cabf37f87d4 +size 25502309 diff --git a/brca/chief/pt_files/TCGA-D8-A27V-01Z-00-DX2.81E4FFDF-7123-4AC3-BE24-A82564A6C34C.pt b/brca/chief/pt_files/TCGA-D8-A27V-01Z-00-DX2.81E4FFDF-7123-4AC3-BE24-A82564A6C34C.pt new file mode 100644 index 0000000000000000000000000000000000000000..d9ea4e15807e3a927699c80fd3c25675cb9ce4db --- /dev/null +++ b/brca/chief/pt_files/TCGA-D8-A27V-01Z-00-DX2.81E4FFDF-7123-4AC3-BE24-A82564A6C34C.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:56ec6b2908c38793b90d1e9f5d4b6f16d65e3a87a61af99878553f2ae0ef344d +size 12261989 diff --git a/brca/chief/pt_files/TCGA-D8-A3Z5-01Z-00-DX2.6196B9FF-F09E-4D44-873D-E53BFB2BF4E1.pt b/brca/chief/pt_files/TCGA-D8-A3Z5-01Z-00-DX2.6196B9FF-F09E-4D44-873D-E53BFB2BF4E1.pt new file mode 100644 index 0000000000000000000000000000000000000000..c0b8c9ca26cc23ea283652a8d8c0bdcdc3818020 --- /dev/null +++ b/brca/chief/pt_files/TCGA-D8-A3Z5-01Z-00-DX2.6196B9FF-F09E-4D44-873D-E53BFB2BF4E1.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:83f2aa5fdd27d57ac6ec85c67c44cd547a8243d26ff79af5242183441d94a3e1 +size 46892645 diff --git a/brca/chief/pt_files/TCGA-D8-A73U-01Z-00-DX1.6ECEF7C0-00CC-4AC2-87BD-DBFB6E0DC042.pt b/brca/chief/pt_files/TCGA-D8-A73U-01Z-00-DX1.6ECEF7C0-00CC-4AC2-87BD-DBFB6E0DC042.pt new file mode 100644 index 0000000000000000000000000000000000000000..2a438e3e84a3be353768aa4e767af1ccbcc0a208 --- /dev/null +++ b/brca/chief/pt_files/TCGA-D8-A73U-01Z-00-DX1.6ECEF7C0-00CC-4AC2-87BD-DBFB6E0DC042.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:898bbee9c996159b7770779e2ebe02dae2aa6426ea574d2384cba905ce0baaa7 +size 12421733 diff --git a/brca/chief/pt_files/TCGA-E2-A107-01Z-00-DX1.3BFCCC24-7286-488D-A9E9-98E498AD0767.pt b/brca/chief/pt_files/TCGA-E2-A107-01Z-00-DX1.3BFCCC24-7286-488D-A9E9-98E498AD0767.pt new file mode 100644 index 0000000000000000000000000000000000000000..d9a8f611635667065a21dd33f468c79962d1da54 --- /dev/null +++ b/brca/chief/pt_files/TCGA-E2-A107-01Z-00-DX1.3BFCCC24-7286-488D-A9E9-98E498AD0767.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:79fb13b9b404cd50db582394a6ea496106f75be8cd55d21f60cf73198d804cad +size 51734117 diff --git a/brca/chief/pt_files/TCGA-E2-A14N-01Z-00-DX1.15F5644F-CA9F-4688-B56E-BCC00CA4769B.pt b/brca/chief/pt_files/TCGA-E2-A14N-01Z-00-DX1.15F5644F-CA9F-4688-B56E-BCC00CA4769B.pt new file mode 100644 index 0000000000000000000000000000000000000000..862cbc97704a9e6e6fddf915bfc028d2bacda0be --- /dev/null +++ b/brca/chief/pt_files/TCGA-E2-A14N-01Z-00-DX1.15F5644F-CA9F-4688-B56E-BCC00CA4769B.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c03f6a10d0831ce734505d90c02b563e5601d58f966bd4345e0515c2eec983d4 +size 30420581 diff --git a/brca/chief/pt_files/TCGA-E2-A14O-01Z-00-DX1.432DB252-35D4-4B02-B0A7-39BF85A38F89.pt b/brca/chief/pt_files/TCGA-E2-A14O-01Z-00-DX1.432DB252-35D4-4B02-B0A7-39BF85A38F89.pt new file mode 100644 index 0000000000000000000000000000000000000000..783baa7abc43a0fcb30b7a06145d1cc6fa97d0d1 --- /dev/null +++ b/brca/chief/pt_files/TCGA-E2-A14O-01Z-00-DX1.432DB252-35D4-4B02-B0A7-39BF85A38F89.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:3b6e31e41a505b3e7ee24cc1599ec305c1bb91589df9dab20fdeb3e8063d7a7c +size 17717861 diff --git a/brca/chief/pt_files/TCGA-E2-A153-01Z-00-DX1.CA994467-E541-4131-A9FC-DCD9944F29C4.pt b/brca/chief/pt_files/TCGA-E2-A153-01Z-00-DX1.CA994467-E541-4131-A9FC-DCD9944F29C4.pt new file mode 100644 index 0000000000000000000000000000000000000000..5646b44f6ed5be8461ec6abaf7a0e2c66585103f --- /dev/null +++ b/brca/chief/pt_files/TCGA-E2-A153-01Z-00-DX1.CA994467-E541-4131-A9FC-DCD9944F29C4.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a4bf8d9c3be02dc83ee4785027510225daa2690c767b19dbc6e18920efb26a6e +size 27916901 diff --git a/brca/chief/pt_files/TCGA-E2-A15F-01Z-00-DX1.F022214A-3F0C-4DA4-A0EE-735D27480A45.pt b/brca/chief/pt_files/TCGA-E2-A15F-01Z-00-DX1.F022214A-3F0C-4DA4-A0EE-735D27480A45.pt new file mode 100644 index 0000000000000000000000000000000000000000..331143ef5345433e7c71fccdb1aa09b94b6a36c3 --- /dev/null +++ b/brca/chief/pt_files/TCGA-E2-A15F-01Z-00-DX1.F022214A-3F0C-4DA4-A0EE-735D27480A45.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b77cc460ee709a3f559be1beba2f351c4177ce50c8ce6d3eb18a7525d7045779 +size 18728549 diff --git a/brca/chief/pt_files/TCGA-E2-A1B6-01Z-00-DX1.8CD458BE-C4F9-4AF3-A927-18C042E9B4B7.pt b/brca/chief/pt_files/TCGA-E2-A1B6-01Z-00-DX1.8CD458BE-C4F9-4AF3-A927-18C042E9B4B7.pt new file mode 100644 index 0000000000000000000000000000000000000000..c7e571a6cc1c76636ae56da0b082156f94abf09d --- /dev/null +++ b/brca/chief/pt_files/TCGA-E2-A1B6-01Z-00-DX1.8CD458BE-C4F9-4AF3-A927-18C042E9B4B7.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f8822f88740a17ebb9697bb96ba629b45a3cc73e26a86348933c224e713a2de7 +size 29118053 diff --git a/brca/chief/pt_files/TCGA-E2-A1LL-01Z-00-DX1.D1AA1613-902C-4579-9612-48A76042B0AE.pt b/brca/chief/pt_files/TCGA-E2-A1LL-01Z-00-DX1.D1AA1613-902C-4579-9612-48A76042B0AE.pt new file mode 100644 index 0000000000000000000000000000000000000000..66f620117291b9fa5863b9ec3300fb826f42c648 --- /dev/null +++ b/brca/chief/pt_files/TCGA-E2-A1LL-01Z-00-DX1.D1AA1613-902C-4579-9612-48A76042B0AE.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:667dd5e9204cdb59299711b09818d8ba6bec9e2fc7789bf417f4c806df51ebe7 +size 29634149 diff --git a/brca/chief/pt_files/TCGA-E2-A573-01Z-00-DX1.D6633BC2-524D-4153-952F-6B1D8D067370.pt b/brca/chief/pt_files/TCGA-E2-A573-01Z-00-DX1.D6633BC2-524D-4153-952F-6B1D8D067370.pt new file mode 100644 index 0000000000000000000000000000000000000000..ad194a40c8c00143ecbbcd82d9238ed98891fd61 --- /dev/null +++ b/brca/chief/pt_files/TCGA-E2-A573-01Z-00-DX1.D6633BC2-524D-4153-952F-6B1D8D067370.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:dedbef1a652acf25fed77b448d7c9908e887325b95ff03c667eaf2afc366ae3d +size 31597157 diff --git a/brca/chief/pt_files/TCGA-E9-A1R6-01Z-00-DX1.59770592-498A-47EA-AE32-42AC1D8E99BE.pt b/brca/chief/pt_files/TCGA-E9-A1R6-01Z-00-DX1.59770592-498A-47EA-AE32-42AC1D8E99BE.pt new file mode 100644 index 0000000000000000000000000000000000000000..3cb319a2a8394ea91c9f119c4db535891912f467 --- /dev/null +++ b/brca/chief/pt_files/TCGA-E9-A1R6-01Z-00-DX1.59770592-498A-47EA-AE32-42AC1D8E99BE.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:e8899725126112839e433f9602635577883b898646d6ce59a0de959263f42c40 +size 44290661 diff --git a/brca/chief/pt_files/TCGA-EW-A1J3-01Z-00-DX1.F736F6F4-0859-439A-A417-98B520C8D65A.pt b/brca/chief/pt_files/TCGA-EW-A1J3-01Z-00-DX1.F736F6F4-0859-439A-A417-98B520C8D65A.pt new file mode 100644 index 0000000000000000000000000000000000000000..ccddbbf71009b856703df6ce0aa2459f4103077a --- /dev/null +++ b/brca/chief/pt_files/TCGA-EW-A1J3-01Z-00-DX1.F736F6F4-0859-439A-A417-98B520C8D65A.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:229783d35ab0546e80faaf2951ca2e00ad8a98ff2121ab127aa31f12c6094739 +size 53859941 diff --git a/brca/chief/pt_files/TCGA-GM-A2DL-01Z-00-DX1.1CE6992E-B1CE-45AB-B2EB-75338B6FEE9D.pt b/brca/chief/pt_files/TCGA-GM-A2DL-01Z-00-DX1.1CE6992E-B1CE-45AB-B2EB-75338B6FEE9D.pt new file mode 100644 index 0000000000000000000000000000000000000000..6e5dd610622f647986dbe5155be7ea77ccbf4f2b --- /dev/null +++ b/brca/chief/pt_files/TCGA-GM-A2DL-01Z-00-DX1.1CE6992E-B1CE-45AB-B2EB-75338B6FEE9D.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:78ae2e166b8daa022f897db3383af3e43dcc229b856b42f8cb6519aa3d30b1b9 +size 33406565 diff --git a/brca/chief/pt_files/TCGA-GM-A2DM-01Z-00-DX1.652038F4-C370-40EB-A545-51062783C74C.pt b/brca/chief/pt_files/TCGA-GM-A2DM-01Z-00-DX1.652038F4-C370-40EB-A545-51062783C74C.pt new file mode 100644 index 0000000000000000000000000000000000000000..20f9572ea4510917c5b6515a0f2ea9fb1bc9840f --- /dev/null +++ b/brca/chief/pt_files/TCGA-GM-A2DM-01Z-00-DX1.652038F4-C370-40EB-A545-51062783C74C.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:530b58d359fd4a8dc61b15c43f636f597742cbaa7f9447484c1fa05718607c49 +size 45448805 diff --git a/brca/chief/pt_files/TCGA-LD-A7W6-01Z-00-DX1.3E125146-B447-4973-AE09-6D374970B46C.pt b/brca/chief/pt_files/TCGA-LD-A7W6-01Z-00-DX1.3E125146-B447-4973-AE09-6D374970B46C.pt new file mode 100644 index 0000000000000000000000000000000000000000..6504b97f53e5c1f825be6fed12e3b2b020ae3bf9 --- /dev/null +++ b/brca/chief/pt_files/TCGA-LD-A7W6-01Z-00-DX1.3E125146-B447-4973-AE09-6D374970B46C.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f2dbefbc860d2585e9de0fd9fd4bb850c30f1811cf7e305d37debd3fa28094c6 +size 19158629 diff --git a/brca/chief/pt_files/TCGA-LL-A441-01Z-00-DX1.33B13078-BB14-4C42-88A6-7460AD2BCD00.pt b/brca/chief/pt_files/TCGA-LL-A441-01Z-00-DX1.33B13078-BB14-4C42-88A6-7460AD2BCD00.pt new file mode 100644 index 0000000000000000000000000000000000000000..1c0700b2d40d02558e77d1879f4c0403292feefc --- /dev/null +++ b/brca/chief/pt_files/TCGA-LL-A441-01Z-00-DX1.33B13078-BB14-4C42-88A6-7460AD2BCD00.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:52e6fb3c1458474fae69077400bae8b3908e2a23afd54b438e92b557bfa54bdb +size 40951397 diff --git a/brca/chief/pt_files/TCGA-OL-A66N-01Z-00-DX1.ABDA3014-7B3A-4D48-A415-CB9608491ECB.pt b/brca/chief/pt_files/TCGA-OL-A66N-01Z-00-DX1.ABDA3014-7B3A-4D48-A415-CB9608491ECB.pt new file mode 100644 index 0000000000000000000000000000000000000000..08a8dce02d9fb95ea292ba2106a6eaac95471908 --- /dev/null +++ b/brca/chief/pt_files/TCGA-OL-A66N-01Z-00-DX1.ABDA3014-7B3A-4D48-A415-CB9608491ECB.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f9e649ce45318ef4ef0ef3429b65f49c7c42ad607da5de402ef52afe58017424 +size 47636069 diff --git a/brca/chief/pt_files/TCGA-PE-A5DD-01Z-00-DX1.E1EF11EC-B87B-49DE-A544-2E162F9AE789.pt b/brca/chief/pt_files/TCGA-PE-A5DD-01Z-00-DX1.E1EF11EC-B87B-49DE-A544-2E162F9AE789.pt new file mode 100644 index 0000000000000000000000000000000000000000..6de1c7a84281f0c204dd1947f4edc81661e071fd --- /dev/null +++ b/brca/chief/pt_files/TCGA-PE-A5DD-01Z-00-DX1.E1EF11EC-B87B-49DE-A544-2E162F9AE789.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:4d32db250087cc0869f998190f644034d9006e20cf773bc2004d093366e1676f +size 23548517 diff --git a/brca/chief/pt_files/TCGA-S3-A6ZH-01Z-00-DX1.E728FF79-4921-436F-BFF5-5B782C0EEB9A.pt b/brca/chief/pt_files/TCGA-S3-A6ZH-01Z-00-DX1.E728FF79-4921-436F-BFF5-5B782C0EEB9A.pt new file mode 100644 index 0000000000000000000000000000000000000000..abbd9d796e9431f6791e70ffa1b4033fec3de331 --- /dev/null +++ b/brca/chief/pt_files/TCGA-S3-A6ZH-01Z-00-DX1.E728FF79-4921-436F-BFF5-5B782C0EEB9A.pt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:eb24ad6d74c3fede1e6c967ffc8d732891367c565e21150d834f4a17fed43095 +size 14605925 diff --git a/brca/patches/TCGA-A1-A0SI-01Z-00-DX1.AB717348-F964-4F29-BBE2-972B7C640432.h5 b/brca/patches/TCGA-A1-A0SI-01Z-00-DX1.AB717348-F964-4F29-BBE2-972B7C640432.h5 new file mode 100644 index 0000000000000000000000000000000000000000..63549f306e218634c88d78742ab983d1dda9e1d0 --- /dev/null +++ b/brca/patches/TCGA-A1-A0SI-01Z-00-DX1.AB717348-F964-4F29-BBE2-972B7C640432.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:e450a869c08ef669e5373f95d8bad44c9971cb18cb1f7d8c896cfc1db18cde4c +size 887392 diff --git a/brca/patches/TCGA-A2-A04N-01Z-00-DX1.9E9B7DB0-1CF1-4631-8292-A9DBCA0BD37C.h5 b/brca/patches/TCGA-A2-A04N-01Z-00-DX1.9E9B7DB0-1CF1-4631-8292-A9DBCA0BD37C.h5 new file mode 100644 index 0000000000000000000000000000000000000000..0188c7df1e563f806e8f177b4506d29852ae1dec --- /dev/null +++ b/brca/patches/TCGA-A2-A04N-01Z-00-DX1.9E9B7DB0-1CF1-4631-8292-A9DBCA0BD37C.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:98e93f7c5a20d7f7ff843a295eb24e00762726b57ff4c01f1cc5665b08311067 +size 657768 diff --git a/brca/patches/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4.h5 b/brca/patches/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4.h5 new file mode 100644 index 0000000000000000000000000000000000000000..ce2f17a3ec29892c508a584e66e3ea95f836d7f6 --- /dev/null +++ b/brca/patches/TCGA-A2-A04Q-01Z-00-DX1.DF7ED6B6-7701-486D-9007-F26B6F0682C4.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ef50b9b24467942937146f64a41d9a427e1d782a15b299f32324504c0f9e5252 +size 229696 diff --git a/brca/patches/TCGA-A2-A04T-01Z-00-DX1.71444266-BD56-4183-9603-C7AC20C9DA1E.h5 b/brca/patches/TCGA-A2-A04T-01Z-00-DX1.71444266-BD56-4183-9603-C7AC20C9DA1E.h5 new file mode 100644 index 0000000000000000000000000000000000000000..331d88bc5d3358e697aab777df5a82be4eb5795f --- /dev/null +++ b/brca/patches/TCGA-A2-A04T-01Z-00-DX1.71444266-BD56-4183-9603-C7AC20C9DA1E.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:4384d15ce5cbb83e0cc711150f07428c41aa9e202ae958a468e47a716fa5ece3 +size 725528 diff --git a/brca/patches/TCGA-A2-A0CR-01Z-00-DX1.F7D36CA5-A4C6-443A-AEED-5B23CD924FA3.h5 b/brca/patches/TCGA-A2-A0CR-01Z-00-DX1.F7D36CA5-A4C6-443A-AEED-5B23CD924FA3.h5 new file mode 100644 index 0000000000000000000000000000000000000000..674d698760e984cc52b3a4bc7ea2eeb604548d53 --- /dev/null +++ b/brca/patches/TCGA-A2-A0CR-01Z-00-DX1.F7D36CA5-A4C6-443A-AEED-5B23CD924FA3.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cfd58c6e399f03e37f4817113f7c8690cd73c9c9f2992a4aba5fcb3b61538a33 +size 1134000 diff --git a/brca/patches/TCGA-A2-A0ES-01Z-00-DX1.5652EE30-48C1-4EC1-AD77-8C72DFCB9A97.h5 b/brca/patches/TCGA-A2-A0ES-01Z-00-DX1.5652EE30-48C1-4EC1-AD77-8C72DFCB9A97.h5 new file mode 100644 index 0000000000000000000000000000000000000000..aa899675c1851e5eeaf2484103e6cc19bc3f0137 --- /dev/null +++ b/brca/patches/TCGA-A2-A0ES-01Z-00-DX1.5652EE30-48C1-4EC1-AD77-8C72DFCB9A97.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:5455e58929992d0ffd643fc36d77c7fe31cb1a7ea20975f8293e43dd815049ea +size 1610416 diff --git a/brca/patches/TCGA-A2-A0SY-01Z-00-DX1.279A5479-E183-4F79-AF40-50BF1834BA4A.h5 b/brca/patches/TCGA-A2-A0SY-01Z-00-DX1.279A5479-E183-4F79-AF40-50BF1834BA4A.h5 new file mode 100644 index 0000000000000000000000000000000000000000..80d1277a8c2ffa9145d9c0fca093a9c2155c8a38 --- /dev/null +++ b/brca/patches/TCGA-A2-A0SY-01Z-00-DX1.279A5479-E183-4F79-AF40-50BF1834BA4A.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ffda80a11e89f898212d4c0edeb3f456e9bef22e49b2fcc62cfd2ed15ade5602 +size 1506000 diff --git a/brca/patches/TCGA-A2-A25D-01Z-00-DX1.41DADDB8-3E3F-4F8F-8BE7-C43F8FBCFD2B.h5 b/brca/patches/TCGA-A2-A25D-01Z-00-DX1.41DADDB8-3E3F-4F8F-8BE7-C43F8FBCFD2B.h5 new file mode 100644 index 0000000000000000000000000000000000000000..510c0236b0e590b8558797a78af04039b62e06aa --- /dev/null +++ b/brca/patches/TCGA-A2-A25D-01Z-00-DX1.41DADDB8-3E3F-4F8F-8BE7-C43F8FBCFD2B.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:5925f05ac171fbb07d7d96dc1bdb58f15afb6f717b9b2b5d9043818c8c94e0b3 +size 1105152 diff --git a/brca/patches/TCGA-A2-A3XY-01Z-00-DX1.E57FC9BF-411E-4028-AC10-8BCA5D0C8472.h5 b/brca/patches/TCGA-A2-A3XY-01Z-00-DX1.E57FC9BF-411E-4028-AC10-8BCA5D0C8472.h5 new file mode 100644 index 0000000000000000000000000000000000000000..7090c5a14a401eb46e2c0a8cbdbc0cf8c5fa9798 --- /dev/null +++ b/brca/patches/TCGA-A2-A3XY-01Z-00-DX1.E57FC9BF-411E-4028-AC10-8BCA5D0C8472.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c52802cf044a31d38bd44a4fce91b47e17529c53ebbe238414d632fd718a69dd +size 711808 diff --git a/brca/patches/TCGA-A2-A4S0-01Z-00-DX1.5878187D-325F-4274-BE41-86BB2BA5F841.h5 b/brca/patches/TCGA-A2-A4S0-01Z-00-DX1.5878187D-325F-4274-BE41-86BB2BA5F841.h5 new file mode 100644 index 0000000000000000000000000000000000000000..710f91bd99ea51b57c6963f9fe14ddf190868d51 --- /dev/null +++ b/brca/patches/TCGA-A2-A4S0-01Z-00-DX1.5878187D-325F-4274-BE41-86BB2BA5F841.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:28e192704917bf38df146f27a61f22c83b63aeecf47e6be89768d8d57df63235 +size 863552 diff --git a/brca/patches/TCGA-A7-A0CJ-01Z-00-DX1.E26F2F62-D688-4373-BB7B-790A06734E49.h5 b/brca/patches/TCGA-A7-A0CJ-01Z-00-DX1.E26F2F62-D688-4373-BB7B-790A06734E49.h5 new file mode 100644 index 0000000000000000000000000000000000000000..7cdd7c15577ef7e9fcbfa7ae8bd935cb740d9b74 --- /dev/null +++ b/brca/patches/TCGA-A7-A0CJ-01Z-00-DX1.E26F2F62-D688-4373-BB7B-790A06734E49.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f6fbf2815639e845c661219755ab250177ef386a23baffc737c186bb4c2110cc +size 166224 diff --git a/brca/patches/TCGA-A7-A0DA-01Z-00-DX2.90C93176-C3C6-41B3-B34B-B16F1A1779E6.h5 b/brca/patches/TCGA-A7-A0DA-01Z-00-DX2.90C93176-C3C6-41B3-B34B-B16F1A1779E6.h5 new file mode 100644 index 0000000000000000000000000000000000000000..0364fec8c882f1721a909a66bb25a4cc2762ec07 --- /dev/null +++ b/brca/patches/TCGA-A7-A0DA-01Z-00-DX2.90C93176-C3C6-41B3-B34B-B16F1A1779E6.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:1faa24a664258db4287cef60dfbb01f3af9ae0d62f3b9d40b91ba33905672dbb +size 232456 diff --git a/brca/patches/TCGA-A7-A0DB-01Z-00-DX1.9CE855BC-0C37-43FB-8806-6625E176BE2E.h5 b/brca/patches/TCGA-A7-A0DB-01Z-00-DX1.9CE855BC-0C37-43FB-8806-6625E176BE2E.h5 new file mode 100644 index 0000000000000000000000000000000000000000..b74fd927996efe71e27f455e252e0a0b481f5fa7 --- /dev/null +++ b/brca/patches/TCGA-A7-A0DB-01Z-00-DX1.9CE855BC-0C37-43FB-8806-6625E176BE2E.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c4a5f76a7fc2094938e634f2d7da4d76b67d73db34ed52788cfc306f9352ff9c +size 324904 diff --git a/brca/patches/TCGA-A7-A13D-01Z-00-DX1.D206783C-FA6A-4B6A-B3AA-4132A2C9626B.h5 b/brca/patches/TCGA-A7-A13D-01Z-00-DX1.D206783C-FA6A-4B6A-B3AA-4132A2C9626B.h5 new file mode 100644 index 0000000000000000000000000000000000000000..a0bb1ee85496135ee84228710d39132a52c8ab99 --- /dev/null +++ b/brca/patches/TCGA-A7-A13D-01Z-00-DX1.D206783C-FA6A-4B6A-B3AA-4132A2C9626B.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:8afd85d4980d4b66c0eefe409a3590b186255c521aa9616957de870b4921bc2c +size 315784 diff --git a/brca/patches/TCGA-A7-A26E-01Z-00-DX1.BA4A7E28-0563-4C23-82D0-AB34A2E79AE3.h5 b/brca/patches/TCGA-A7-A26E-01Z-00-DX1.BA4A7E28-0563-4C23-82D0-AB34A2E79AE3.h5 new file mode 100644 index 0000000000000000000000000000000000000000..b45a64322827ee89b28bab16f72d11c5b7a3d4cc --- /dev/null +++ b/brca/patches/TCGA-A7-A26E-01Z-00-DX1.BA4A7E28-0563-4C23-82D0-AB34A2E79AE3.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:56419e65fe7d769279d565d4c96afeeb7955951c691b12b5c15a9b00d6267d7a +size 364760 diff --git a/brca/patches/TCGA-A7-A426-01Z-00-DX1.3058E873-9442-4872-80DA-E8A5B35054D2.h5 b/brca/patches/TCGA-A7-A426-01Z-00-DX1.3058E873-9442-4872-80DA-E8A5B35054D2.h5 new file mode 100644 index 0000000000000000000000000000000000000000..c59d42cd8ff60b6477eb872da6418f6923f9f2e3 --- /dev/null +++ b/brca/patches/TCGA-A7-A426-01Z-00-DX1.3058E873-9442-4872-80DA-E8A5B35054D2.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:098e080e689851a148b69849645eb76fe9db365681f52a904f7c9804b38198d5 +size 390992 diff --git a/brca/patches/TCGA-A7-A4SC-01Z-00-DX1.171E89D2-2D64-4C3F-A42C-B1167654858B.h5 b/brca/patches/TCGA-A7-A4SC-01Z-00-DX1.171E89D2-2D64-4C3F-A42C-B1167654858B.h5 new file mode 100644 index 0000000000000000000000000000000000000000..5740e37c76caa5779e587b17cea61c8347140bf0 --- /dev/null +++ b/brca/patches/TCGA-A7-A4SC-01Z-00-DX1.171E89D2-2D64-4C3F-A42C-B1167654858B.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b57186ba21c399058b2ad9b69e5b8c8bf2cccee25759f9532d77b713532c711a +size 274408 diff --git a/brca/patches/TCGA-A7-A6VV-01Z-00-DX1.07AE0E16-A883-4C86-BC74-4E13081175F2.h5 b/brca/patches/TCGA-A7-A6VV-01Z-00-DX1.07AE0E16-A883-4C86-BC74-4E13081175F2.h5 new file mode 100644 index 0000000000000000000000000000000000000000..26ceb96bdfbda59ba67e3739a0f8247563d155e7 --- /dev/null +++ b/brca/patches/TCGA-A7-A6VV-01Z-00-DX1.07AE0E16-A883-4C86-BC74-4E13081175F2.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:97e88234f47320e13968eee028ea91455739ec95c06a4b15da7e830394f43006 +size 315576 diff --git a/brca/patches/TCGA-A8-A08I-01Z-00-DX1.96A0065E-5430-40F6-835E-1A7238A79DDA.h5 b/brca/patches/TCGA-A8-A08I-01Z-00-DX1.96A0065E-5430-40F6-835E-1A7238A79DDA.h5 new file mode 100644 index 0000000000000000000000000000000000000000..2156a1203310459ce2b75021acc2b4cb8e9f3c09 --- /dev/null +++ b/brca/patches/TCGA-A8-A08I-01Z-00-DX1.96A0065E-5430-40F6-835E-1A7238A79DDA.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:74cb71cf9451beafc987e3cb86eb92de74131bd9080b135fac905f36ccae72e0 +size 163984 diff --git a/brca/patches/TCGA-A8-A09W-01Z-00-DX1.BF33B0F9-5786-4682-B59E-DCBD33D7BB03.h5 b/brca/patches/TCGA-A8-A09W-01Z-00-DX1.BF33B0F9-5786-4682-B59E-DCBD33D7BB03.h5 new file mode 100644 index 0000000000000000000000000000000000000000..bdcd81b75c2b2c7f2e008caa08022acab1c07cf1 --- /dev/null +++ b/brca/patches/TCGA-A8-A09W-01Z-00-DX1.BF33B0F9-5786-4682-B59E-DCBD33D7BB03.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cf6c561770197cd409809ac975cf2d5d4b72d45bd14be43074701eb335547e06 +size 183400 diff --git a/brca/patches/TCGA-AC-A3QP-01Z-00-DX1.4B97E53E-1069-40C5-A062-C988663B37DD.h5 b/brca/patches/TCGA-AC-A3QP-01Z-00-DX1.4B97E53E-1069-40C5-A062-C988663B37DD.h5 new file mode 100644 index 0000000000000000000000000000000000000000..70dd43a807d973a161b8d4b2300e910797b4c426 --- /dev/null +++ b/brca/patches/TCGA-AC-A3QP-01Z-00-DX1.4B97E53E-1069-40C5-A062-C988663B37DD.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b376b1cd4209df9a5921c3386fae980632b1b94f8d0f64b50dc61edcb128b55c +size 262432 diff --git a/brca/patches/TCGA-AC-A62V-01Z-00-DX1.2D8994FD-58B8-43C1-B99D-AA964E7DFD60.h5 b/brca/patches/TCGA-AC-A62V-01Z-00-DX1.2D8994FD-58B8-43C1-B99D-AA964E7DFD60.h5 new file mode 100644 index 0000000000000000000000000000000000000000..c916df14e79895ed68014d53faf1965ebe8b5031 --- /dev/null +++ b/brca/patches/TCGA-AC-A62V-01Z-00-DX1.2D8994FD-58B8-43C1-B99D-AA964E7DFD60.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:57bc6cdd7b1fe4c837392a4d42f341770c9bdda19229fea8b0ff3e0d6809becd +size 84056 diff --git a/brca/patches/TCGA-AC-A6IW-01Z-00-DX1.C4514189-E64F-4603-8970-230FA2BB77FC.h5 b/brca/patches/TCGA-AC-A6IW-01Z-00-DX1.C4514189-E64F-4603-8970-230FA2BB77FC.h5 new file mode 100644 index 0000000000000000000000000000000000000000..bc57bb50c545573c348a9a274f2b7ede68c064af --- /dev/null +++ b/brca/patches/TCGA-AC-A6IW-01Z-00-DX1.C4514189-E64F-4603-8970-230FA2BB77FC.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:e9c244417a138254d093e13642bc46517165f6586071ae4f1902e28a9d2359fb +size 119928 diff --git a/brca/patches/TCGA-AC-A6IX-01Z-00-DX1.45B63C4F-9DC3-4CED-9DF9-0F86E647BEA3.h5 b/brca/patches/TCGA-AC-A6IX-01Z-00-DX1.45B63C4F-9DC3-4CED-9DF9-0F86E647BEA3.h5 new file mode 100644 index 0000000000000000000000000000000000000000..2166719f5b77673e7f4498f8425b7f8bf3516e83 --- /dev/null +++ b/brca/patches/TCGA-AC-A6IX-01Z-00-DX1.45B63C4F-9DC3-4CED-9DF9-0F86E647BEA3.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:15c8cea4f7b1d0edcd507cffbb16c4bd4ac5862712fdc52bb43fd63aabe629f6 +size 151664 diff --git a/brca/patches/TCGA-AC-A6NO-01Z-00-DX1.61B7F48C-6D6E-4C1B-B236-DD130ECBDA9D.h5 b/brca/patches/TCGA-AC-A6NO-01Z-00-DX1.61B7F48C-6D6E-4C1B-B236-DD130ECBDA9D.h5 new file mode 100644 index 0000000000000000000000000000000000000000..58f8238e43e5af9c0eff13f6f403dcf10a97876b --- /dev/null +++ b/brca/patches/TCGA-AC-A6NO-01Z-00-DX1.61B7F48C-6D6E-4C1B-B236-DD130ECBDA9D.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:082a7d11042203808d43bc1c2eb77065f0e9df5d5f65605be54c929facb0759a +size 158944 diff --git a/brca/patches/TCGA-AC-A8OQ-01Z-00-DX1.15946A44-711C-4765-AB46-5CFB7BD11E42.h5 b/brca/patches/TCGA-AC-A8OQ-01Z-00-DX1.15946A44-711C-4765-AB46-5CFB7BD11E42.h5 new file mode 100644 index 0000000000000000000000000000000000000000..70e5064098ba2a4700f5dec35cd8c6a35b79ecad --- /dev/null +++ b/brca/patches/TCGA-AC-A8OQ-01Z-00-DX1.15946A44-711C-4765-AB46-5CFB7BD11E42.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fa77316886c4c620938d454a65bdfa9d547cbbf8896f8a62e15c85e9aab61e44 +size 347312 diff --git a/brca/patches/TCGA-AC-A8OR-01Z-00-DX1.C9A35592-1E73-40D4-834A-46E3471D84A3.h5 b/brca/patches/TCGA-AC-A8OR-01Z-00-DX1.C9A35592-1E73-40D4-834A-46E3471D84A3.h5 new file mode 100644 index 0000000000000000000000000000000000000000..8a71dc103c939d26426ca05a8186b26c01dfa0c0 --- /dev/null +++ b/brca/patches/TCGA-AC-A8OR-01Z-00-DX1.C9A35592-1E73-40D4-834A-46E3471D84A3.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:42b954151560c65e9859fbdab973ff3518272e49b87f8466031d7b632a601f0a +size 88192 diff --git a/brca/patches/TCGA-AN-A046-01Z-00-DX1.C529B94F-AFE3-4701-BC98-5D6EDF7B82C0.h5 b/brca/patches/TCGA-AN-A046-01Z-00-DX1.C529B94F-AFE3-4701-BC98-5D6EDF7B82C0.h5 new file mode 100644 index 0000000000000000000000000000000000000000..14e52729c1e82832f7534732a4b8083da892a425 --- /dev/null +++ b/brca/patches/TCGA-AN-A046-01Z-00-DX1.C529B94F-AFE3-4701-BC98-5D6EDF7B82C0.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:3df7c0e53ef08518112c69b3f6c67c1d5ac06ee89f5644bb4fe290feae3436f7 +size 264048 diff --git a/brca/patches/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD.h5 b/brca/patches/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD.h5 new file mode 100644 index 0000000000000000000000000000000000000000..ec395953d8f3669d42cd0fc0f477d255e0160341 --- /dev/null +++ b/brca/patches/TCGA-AN-A0XO-01Z-00-DX1.204E554E-B1A8-41AD-8E39-62484DF4E3CD.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:dc593736d5b0f716cf0ea7e0a164ab657f2ef9feac0efe4ed16c1f3dbc462ff9 +size 347312 diff --git a/brca/patches/TCGA-AN-A0XW-01Z-00-DX1.811E11E7-FA67-46BB-9BC6-1FD0106B789D.h5 b/brca/patches/TCGA-AN-A0XW-01Z-00-DX1.811E11E7-FA67-46BB-9BC6-1FD0106B789D.h5 new file mode 100644 index 0000000000000000000000000000000000000000..9f1f1d6f4b4f18ec109f140c4ccc9653e51a8dd1 --- /dev/null +++ b/brca/patches/TCGA-AN-A0XW-01Z-00-DX1.811E11E7-FA67-46BB-9BC6-1FD0106B789D.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:519b567afa577a993b21a301cd195e9e373cb510a8dd2d1619502c7b7136715f +size 20656 diff --git a/brca/patches/TCGA-AO-A0J4-01Z-00-DX1.2EFC978E-8DF5-4254-9598-C0910B17C5C8.h5 b/brca/patches/TCGA-AO-A0J4-01Z-00-DX1.2EFC978E-8DF5-4254-9598-C0910B17C5C8.h5 new file mode 100644 index 0000000000000000000000000000000000000000..c03a97ba2b5e020059e4048aefffe100d14cd97d --- /dev/null +++ b/brca/patches/TCGA-AO-A0J4-01Z-00-DX1.2EFC978E-8DF5-4254-9598-C0910B17C5C8.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:5ed6147a6fdaf96e4765e013804ba0b51df2e236a3d2d91c17c0ecd2bb407977 +size 197960 diff --git a/brca/patches/TCGA-AO-A0J7-01Z-00-DX1.DBA7BA24-CEEF-4636-87BB-D12D8DF016A3.h5 b/brca/patches/TCGA-AO-A0J7-01Z-00-DX1.DBA7BA24-CEEF-4636-87BB-D12D8DF016A3.h5 new file mode 100644 index 0000000000000000000000000000000000000000..47a20d28336da445162a144c0ad76443104696ef --- /dev/null +++ b/brca/patches/TCGA-AO-A0J7-01Z-00-DX1.DBA7BA24-CEEF-4636-87BB-D12D8DF016A3.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:9ab26d06f6a55aa5cdc7a974d411c1631990501672db840ff7aa17ddd5d065ae +size 183400 diff --git a/brca/patches/TCGA-AO-A0JC-01Z-00-DX1.C8DD421B-9799-4FE7-9224-5EAC6ED1028E.h5 b/brca/patches/TCGA-AO-A0JC-01Z-00-DX1.C8DD421B-9799-4FE7-9224-5EAC6ED1028E.h5 new file mode 100644 index 0000000000000000000000000000000000000000..3a1dbbd12c3d5cbfbf23fb5db5334947974b4747 --- /dev/null +++ b/brca/patches/TCGA-AO-A0JC-01Z-00-DX1.C8DD421B-9799-4FE7-9224-5EAC6ED1028E.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:1e71ce3aa682c09cde032820eacf64aac05f170b3780fd734b7c4102b4ad2adb +size 318192 diff --git a/brca/patches/TCGA-AO-A12E-01Z-00-DX1.F2797928-26EC-4B28-BC50-432EB380624B.h5 b/brca/patches/TCGA-AO-A12E-01Z-00-DX1.F2797928-26EC-4B28-BC50-432EB380624B.h5 new file mode 100644 index 0000000000000000000000000000000000000000..eb9e6b28e235985690dfad7fbdf66ef000c73c31 --- /dev/null +++ b/brca/patches/TCGA-AO-A12E-01Z-00-DX1.F2797928-26EC-4B28-BC50-432EB380624B.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:778da3bcdc3a776fc1b2b06ad477a63d21c93bd275875126e0574fd36aab4d73 +size 119736 diff --git a/brca/patches/TCGA-AO-A1KQ-01Z-00-DX1.CAB7D9A5-7030-4A33-BE51-9B04D67A7676.h5 b/brca/patches/TCGA-AO-A1KQ-01Z-00-DX1.CAB7D9A5-7030-4A33-BE51-9B04D67A7676.h5 new file mode 100644 index 0000000000000000000000000000000000000000..bc94c808bb34c4346a9e7f82a717ea67801d42b7 --- /dev/null +++ b/brca/patches/TCGA-AO-A1KQ-01Z-00-DX1.CAB7D9A5-7030-4A33-BE51-9B04D67A7676.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:026de0cd0c2df099bb5970e34144df275b21d8cca3064ef44ffd5f5337afa431 +size 205240 diff --git a/brca/patches/TCGA-AQ-A04J-01Z-00-DX1.6A4E16D4-2696-4E5F-BCA8-708556FC3A8C.h5 b/brca/patches/TCGA-AQ-A04J-01Z-00-DX1.6A4E16D4-2696-4E5F-BCA8-708556FC3A8C.h5 new file mode 100644 index 0000000000000000000000000000000000000000..0789ae7174bccf7b352e56f06c9092b15997bb3e --- /dev/null +++ b/brca/patches/TCGA-AQ-A04J-01Z-00-DX1.6A4E16D4-2696-4E5F-BCA8-708556FC3A8C.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:17ef3f31f053fc5603541cbb86d9ac73f465a12f5c8d811aa57c10863a9e95a4 +size 662640 diff --git a/brca/patches/TCGA-AR-A0TP-01Z-00-DX1.58E6A3A6-D1D7-4AE5-87A5-E823F04CBB2F.h5 b/brca/patches/TCGA-AR-A0TP-01Z-00-DX1.58E6A3A6-D1D7-4AE5-87A5-E823F04CBB2F.h5 new file mode 100644 index 0000000000000000000000000000000000000000..0be4f093b76539faa748017056032a0c65bbc16a --- /dev/null +++ b/brca/patches/TCGA-AR-A0TP-01Z-00-DX1.58E6A3A6-D1D7-4AE5-87A5-E823F04CBB2F.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:13ecf2b4eb590ea77b78454c280e6fcf7d053140a7aa5e57d8b5dc27a96a0fd2 +size 723856 diff --git a/brca/patches/TCGA-AR-A0TT-01Z-00-DX1.127C2A4F-62AC-4E83-99DB-13519BD2949D.h5 b/brca/patches/TCGA-AR-A0TT-01Z-00-DX1.127C2A4F-62AC-4E83-99DB-13519BD2949D.h5 new file mode 100644 index 0000000000000000000000000000000000000000..a0079b39abaff98a3a19f3f3dfdc004c7ffef331 --- /dev/null +++ b/brca/patches/TCGA-AR-A0TT-01Z-00-DX1.127C2A4F-62AC-4E83-99DB-13519BD2949D.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:886e740b7259b6f73bbf1aebde5f93199972841aedbab8b0b12d916eabd298fb +size 606320 diff --git a/brca/patches/TCGA-AR-A0TY-01Z-00-DX1.089EB6B4-9921-441D-84F3-C64C97AFC3B4.h5 b/brca/patches/TCGA-AR-A0TY-01Z-00-DX1.089EB6B4-9921-441D-84F3-C64C97AFC3B4.h5 new file mode 100644 index 0000000000000000000000000000000000000000..67f26a18fda224e99386d4325eede3119794c1d8 --- /dev/null +++ b/brca/patches/TCGA-AR-A0TY-01Z-00-DX1.089EB6B4-9921-441D-84F3-C64C97AFC3B4.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:87fa1adf30f59b6e09ec5c1b069048b66f2030946345cde458c80213e5840517 +size 615760 diff --git a/brca/patches/TCGA-AR-A1AH-01Z-00-DX1.5D5D7774-77BB-4EA0-9E8E-A8D28F70A575.h5 b/brca/patches/TCGA-AR-A1AH-01Z-00-DX1.5D5D7774-77BB-4EA0-9E8E-A8D28F70A575.h5 new file mode 100644 index 0000000000000000000000000000000000000000..6d5b9bd9ff08a1b5a28c44f48f1a4febecf6ea6e --- /dev/null +++ b/brca/patches/TCGA-AR-A1AH-01Z-00-DX1.5D5D7774-77BB-4EA0-9E8E-A8D28F70A575.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c9d659209cec78af0af35655a664011a2e1d0d5897814cf6b2580f5da24a2ab2 +size 1072992 diff --git a/brca/patches/TCGA-AR-A1AQ-01Z-00-DX1.09D5D7FC-0FA8-4176-94B2-995F44D8ED4C.h5 b/brca/patches/TCGA-AR-A1AQ-01Z-00-DX1.09D5D7FC-0FA8-4176-94B2-995F44D8ED4C.h5 new file mode 100644 index 0000000000000000000000000000000000000000..f4a18633cf2c4636f7ff1538609a7f9cd035604b --- /dev/null +++ b/brca/patches/TCGA-AR-A1AQ-01Z-00-DX1.09D5D7FC-0FA8-4176-94B2-995F44D8ED4C.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b59a50bd099fa95053d1d8fd6df9eb24c588cfb9d6c8b0c0317dead0c9e7aae5 +size 469512 diff --git a/brca/patches/TCGA-AR-A1AU-01Z-00-DX1.F06647D1-E5A3-46FE-8537-01A10A08A4EC.h5 b/brca/patches/TCGA-AR-A1AU-01Z-00-DX1.F06647D1-E5A3-46FE-8537-01A10A08A4EC.h5 new file mode 100644 index 0000000000000000000000000000000000000000..76c5d9a185b02f084b5c4e475d885ae835f0c09e --- /dev/null +++ b/brca/patches/TCGA-AR-A1AU-01Z-00-DX1.F06647D1-E5A3-46FE-8537-01A10A08A4EC.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:43e548d8e90ad692d3bec4856b7deac806b03aa75348250090fb7f7c47f04e7b +size 1085088 diff --git a/brca/patches/TCGA-AR-A2LJ-01Z-00-DX1.9D6257FA-2767-4640-9252-9BE18BD9D158.h5 b/brca/patches/TCGA-AR-A2LJ-01Z-00-DX1.9D6257FA-2767-4640-9252-9BE18BD9D158.h5 new file mode 100644 index 0000000000000000000000000000000000000000..ddc333f5e348050d393aede81e47e870cbde1c37 --- /dev/null +++ b/brca/patches/TCGA-AR-A2LJ-01Z-00-DX1.9D6257FA-2767-4640-9252-9BE18BD9D158.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ce26200928c873a3e2c87b91a4270c25121bb2b5cf40633843d9a33430e5e7fc +size 912232 diff --git a/brca/patches/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38.h5 b/brca/patches/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38.h5 new file mode 100644 index 0000000000000000000000000000000000000000..0c255d125a23959e0e5605b6db2470c64edb5cd6 --- /dev/null +++ b/brca/patches/TCGA-B6-A0I2-01Z-00-DX1.885D2034-73B7-48AE-8343-631F89061C38.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6a8f2904cfff439c2eeeba3ad6ec746128ffa90bd991c32078c49a98e247b8e4 +size 642832 diff --git a/brca/patches/TCGA-B6-A0RM-01Z-00-DX1.31DE3E32-7996-4D30-BB5F-72C94409C940.h5 b/brca/patches/TCGA-B6-A0RM-01Z-00-DX1.31DE3E32-7996-4D30-BB5F-72C94409C940.h5 new file mode 100644 index 0000000000000000000000000000000000000000..325efa515b75270cabea7d9cbd537299aaec8b44 --- /dev/null +++ b/brca/patches/TCGA-B6-A0RM-01Z-00-DX1.31DE3E32-7996-4D30-BB5F-72C94409C940.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:86d202eecbd616e8ea935ead0f272407cd3d38bee45f14f9a9c9ae9b732ac894 +size 962808 diff --git a/brca/patches/TCGA-B6-A0WS-01Z-00-DX1.020ED7BF-9497-4F13-AA07-FE0E839F9A06.h5 b/brca/patches/TCGA-B6-A0WS-01Z-00-DX1.020ED7BF-9497-4F13-AA07-FE0E839F9A06.h5 new file mode 100644 index 0000000000000000000000000000000000000000..2410e810df231e5c4cbf790ec7e89448f3d19d8e --- /dev/null +++ b/brca/patches/TCGA-B6-A0WS-01Z-00-DX1.020ED7BF-9497-4F13-AA07-FE0E839F9A06.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:5837b00916b620cadaf65bacffba2c526770324bba3ec89e53cadf7c83517203 +size 809168 diff --git a/brca/patches/TCGA-B6-A0WZ-01Z-00-DX1.6CFB236E-36F5-43D6-8DE3-C4ECBD3C14C6.h5 b/brca/patches/TCGA-B6-A0WZ-01Z-00-DX1.6CFB236E-36F5-43D6-8DE3-C4ECBD3C14C6.h5 new file mode 100644 index 0000000000000000000000000000000000000000..fe2cbcdaa0df76927aee2f7e7b38d613902faa9a --- /dev/null +++ b/brca/patches/TCGA-B6-A0WZ-01Z-00-DX1.6CFB236E-36F5-43D6-8DE3-C4ECBD3C14C6.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a5b6b5e1c702fa722ed7d2b5297f949bd91c86d05cabb9acf7634d8955381a6d +size 557896 diff --git a/brca/patches/TCGA-B6-A1KF-01Z-00-DX1.2E08E830-4216-4CD0-9646-1F489300E11D.h5 b/brca/patches/TCGA-B6-A1KF-01Z-00-DX1.2E08E830-4216-4CD0-9646-1F489300E11D.h5 new file mode 100644 index 0000000000000000000000000000000000000000..d0b043e4ed4c30d498da9a65ed8bf2909af90441 --- /dev/null +++ b/brca/patches/TCGA-B6-A1KF-01Z-00-DX1.2E08E830-4216-4CD0-9646-1F489300E11D.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c2f4588ed9dc88134b89f8470653a82879d6fcd6c38f7610b5a77c530c4618c6 +size 935544 diff --git a/brca/patches/TCGA-BH-A0AW-01Z-00-DX1.9D50A0D2-B103-411C-831E-8520C3D50173.h5 b/brca/patches/TCGA-BH-A0AW-01Z-00-DX1.9D50A0D2-B103-411C-831E-8520C3D50173.h5 new file mode 100644 index 0000000000000000000000000000000000000000..bd043b77a23763513f79b3e93c61a7725efd8911 --- /dev/null +++ b/brca/patches/TCGA-BH-A0AW-01Z-00-DX1.9D50A0D2-B103-411C-831E-8520C3D50173.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:e1fe5d3dbc1fd03123ff2786fd0deba579ae3f432f6af94b329fb922150b5e14 +size 782672 diff --git a/brca/patches/TCGA-BH-A0BA-01Z-00-DX1.579E11C9-437C-4D49-8811-DD94D8454712.h5 b/brca/patches/TCGA-BH-A0BA-01Z-00-DX1.579E11C9-437C-4D49-8811-DD94D8454712.h5 new file mode 100644 index 0000000000000000000000000000000000000000..491f465ebd2d2236aeaf00a331fe556257cdc66b --- /dev/null +++ b/brca/patches/TCGA-BH-A0BA-01Z-00-DX1.579E11C9-437C-4D49-8811-DD94D8454712.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cbf640bf11fc6cf871310d89076a4d04e917d5ae7300e6be4dd349d5f729020c +size 1092368 diff --git a/brca/patches/TCGA-BH-A0BO-01Z-00-DX1.1A704471-FEB3-40F9-9838-3E347A18285F.h5 b/brca/patches/TCGA-BH-A0BO-01Z-00-DX1.1A704471-FEB3-40F9-9838-3E347A18285F.h5 new file mode 100644 index 0000000000000000000000000000000000000000..eb55c801fb23567a85f89f64273037f5bcc48b9e --- /dev/null +++ b/brca/patches/TCGA-BH-A0BO-01Z-00-DX1.1A704471-FEB3-40F9-9838-3E347A18285F.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c26792cb3f7fdcd886571bbf6a758050de57aa096fc8d81f67f71b5ee0b35a79 +size 213024 diff --git a/brca/patches/TCGA-BH-A0BQ-01Z-00-DX1.F5C6386B-BB2C-49DF-B3B8-6C4B80D060D4.h5 b/brca/patches/TCGA-BH-A0BQ-01Z-00-DX1.F5C6386B-BB2C-49DF-B3B8-6C4B80D060D4.h5 new file mode 100644 index 0000000000000000000000000000000000000000..fb5f1359dcaf9fbc048b1079de4093c0b71d881a --- /dev/null +++ b/brca/patches/TCGA-BH-A0BQ-01Z-00-DX1.F5C6386B-BB2C-49DF-B3B8-6C4B80D060D4.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fa024adbb6413aec0e2a3caab6d88ea98fd79a44038b8aa2f1c1c3671c21710f +size 1322880 diff --git a/brca/patches/TCGA-BH-A0C3-01Z-00-DX1.14D3210D-0CBE-4DCA-A986-A26AE5382502.h5 b/brca/patches/TCGA-BH-A0C3-01Z-00-DX1.14D3210D-0CBE-4DCA-A986-A26AE5382502.h5 new file mode 100644 index 0000000000000000000000000000000000000000..d1ed1f7eb3119c0ce4a3da18f5995a854a7e27b3 --- /dev/null +++ b/brca/patches/TCGA-BH-A0C3-01Z-00-DX1.14D3210D-0CBE-4DCA-A986-A26AE5382502.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:9d55b9ff3acd29a57e4c6c5dfc2d91cf40e2f71580424e20ab7df18bfabaedad +size 828584 diff --git a/brca/patches/TCGA-BH-A0DD-01Z-00-DX1.2242DD1F-0B7C-4B43-A7A9-8130D2BDEE78.h5 b/brca/patches/TCGA-BH-A0DD-01Z-00-DX1.2242DD1F-0B7C-4B43-A7A9-8130D2BDEE78.h5 new file mode 100644 index 0000000000000000000000000000000000000000..eeb42de65b3ecd18890b915372d91cb3a41c55dd --- /dev/null +++ b/brca/patches/TCGA-BH-A0DD-01Z-00-DX1.2242DD1F-0B7C-4B43-A7A9-8130D2BDEE78.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6c3234c6abffbcfabc2e90b69d593541fba6b8f1a3832d0805c8dda2b1123609 +size 843144 diff --git a/brca/patches/TCGA-BH-A0DS-01Z-00-DX1.38E82A1F-21B9-4B97-A304-15B886EA68A0.h5 b/brca/patches/TCGA-BH-A0DS-01Z-00-DX1.38E82A1F-21B9-4B97-A304-15B886EA68A0.h5 new file mode 100644 index 0000000000000000000000000000000000000000..72fd5ac8b58ba31cb9248477321bdf942c3a6783 --- /dev/null +++ b/brca/patches/TCGA-BH-A0DS-01Z-00-DX1.38E82A1F-21B9-4B97-A304-15B886EA68A0.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a5a52fc3d4895e4ab696b43364e0081da0420384a6c608303ef028ed82968514 +size 553384 diff --git a/brca/patches/TCGA-BH-A0EB-01Z-00-DX1.70D7BBA0-214D-4D1A-933C-7CFCDA5416A3.h5 b/brca/patches/TCGA-BH-A0EB-01Z-00-DX1.70D7BBA0-214D-4D1A-933C-7CFCDA5416A3.h5 new file mode 100644 index 0000000000000000000000000000000000000000..e54cdc9587fab152734136b23873c0be0955d88b --- /dev/null +++ b/brca/patches/TCGA-BH-A0EB-01Z-00-DX1.70D7BBA0-214D-4D1A-933C-7CFCDA5416A3.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cc0cc427c3b1bf4c6818c3f1b24dfcd37742fe1db1a8a97a355035bb09cb2db7 +size 1226592 diff --git a/brca/patches/TCGA-BH-A0H9-01Z-00-DX1.8AE869C6-5C78-4D52-AC8B-5B6FD5FD91AA.h5 b/brca/patches/TCGA-BH-A0H9-01Z-00-DX1.8AE869C6-5C78-4D52-AC8B-5B6FD5FD91AA.h5 new file mode 100644 index 0000000000000000000000000000000000000000..beb066f3cf86f1cc0e6b53b70f08a4d7fa816e3b --- /dev/null +++ b/brca/patches/TCGA-BH-A0H9-01Z-00-DX1.8AE869C6-5C78-4D52-AC8B-5B6FD5FD91AA.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:20f25f890438e70ee91c6b2a5ec60d18354e144b8432d52480afdf55ace48c0a +size 875256 diff --git a/brca/patches/TCGA-BH-A0HK-01Z-00-DX1.019036F5-647A-4EC4-8479-F2C100291AEF.h5 b/brca/patches/TCGA-BH-A0HK-01Z-00-DX1.019036F5-647A-4EC4-8479-F2C100291AEF.h5 new file mode 100644 index 0000000000000000000000000000000000000000..334d965385d01e8a5aa69b0be172e05d38ef4f8a --- /dev/null +++ b/brca/patches/TCGA-BH-A0HK-01Z-00-DX1.019036F5-647A-4EC4-8479-F2C100291AEF.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d50d85c04f758f837dd6ec3d776ba71b36ebfeabb6c433ad0e6e43ba32c8788d +size 1607992 diff --git a/brca/patches/TCGA-BH-A5IZ-01Z-00-DX1.6C871030-82E1-463E-A67B-976A5F3DCDB2.h5 b/brca/patches/TCGA-BH-A5IZ-01Z-00-DX1.6C871030-82E1-463E-A67B-976A5F3DCDB2.h5 new file mode 100644 index 0000000000000000000000000000000000000000..45027ce7928bf8824f37de7576b26b7e614dcfd1 --- /dev/null +++ b/brca/patches/TCGA-BH-A5IZ-01Z-00-DX1.6C871030-82E1-463E-A67B-976A5F3DCDB2.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:1a1f495443b2db4e5c2b3aabcda01ff60904dfebbbdc57fde44d9ebf11ffa344 +size 1040840 diff --git a/brca/patches/TCGA-C8-A12T-01Z-00-DX1.EF628C26-C570-4D15-A0C0-58B2CC40ABFC.h5 b/brca/patches/TCGA-C8-A12T-01Z-00-DX1.EF628C26-C570-4D15-A0C0-58B2CC40ABFC.h5 new file mode 100644 index 0000000000000000000000000000000000000000..1f2f705be0148a02ca097992fa26861455416d39 --- /dev/null +++ b/brca/patches/TCGA-C8-A12T-01Z-00-DX1.EF628C26-C570-4D15-A0C0-58B2CC40ABFC.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:44d511fbe262b89bacee322db0c5b4ea608da41f7fcf288bda0aa966579aa041 +size 807208 diff --git a/brca/patches/TCGA-C8-A12X-01Z-00-DX1.2967579D-40AE-4425-BE81-5109713C16B4.h5 b/brca/patches/TCGA-C8-A12X-01Z-00-DX1.2967579D-40AE-4425-BE81-5109713C16B4.h5 new file mode 100644 index 0000000000000000000000000000000000000000..90dbac6ffe02af77469f5d8a55fc5b7b8ce114f4 --- /dev/null +++ b/brca/patches/TCGA-C8-A12X-01Z-00-DX1.2967579D-40AE-4425-BE81-5109713C16B4.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:818b757fcf1829f887ff0ece7606a601e57af3b8c134664afb9af2ab1b0290db +size 554904 diff --git a/brca/patches/TCGA-C8-A135-01Z-00-DX1.B69A605E-B577-4F43-9471-2C95312B05D9.h5 b/brca/patches/TCGA-C8-A135-01Z-00-DX1.B69A605E-B577-4F43-9471-2C95312B05D9.h5 new file mode 100644 index 0000000000000000000000000000000000000000..c6ccdbfd34e73bfce19b43c1a1b2f78aabdd336a --- /dev/null +++ b/brca/patches/TCGA-C8-A135-01Z-00-DX1.B69A605E-B577-4F43-9471-2C95312B05D9.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:105d22107571a83b3dab99ec0b885b293d60f2d8b7d7920d44599dea7f831486 +size 892056 diff --git a/brca/patches/TCGA-C8-A273-01Z-00-DX1.6E5D581F-DF80-478D-82D1-6D6525EED1B5.h5 b/brca/patches/TCGA-C8-A273-01Z-00-DX1.6E5D581F-DF80-478D-82D1-6D6525EED1B5.h5 new file mode 100644 index 0000000000000000000000000000000000000000..ef344bbfc252343da00edf187b1e306afe9d9854 --- /dev/null +++ b/brca/patches/TCGA-C8-A273-01Z-00-DX1.6E5D581F-DF80-478D-82D1-6D6525EED1B5.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:8ae77a32e4cbd6da4f0e2ad3ecbb47ad34aed4a3af144b2e2793f0cdd7f5ef83 +size 543664 diff --git a/brca/patches/TCGA-C8-A8HQ-01Z-00-DX1.A08190B5-F17E-4057-9DBD-B2F34CAEAFDC.h5 b/brca/patches/TCGA-C8-A8HQ-01Z-00-DX1.A08190B5-F17E-4057-9DBD-B2F34CAEAFDC.h5 new file mode 100644 index 0000000000000000000000000000000000000000..b5523e8589b8e4d762d6d5ca767462ec4d45f779 --- /dev/null +++ b/brca/patches/TCGA-C8-A8HQ-01Z-00-DX1.A08190B5-F17E-4057-9DBD-B2F34CAEAFDC.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:4be1324dcb1da7fcba38ccf60495f484ff3a7b02008192286499309101e7b9d8 +size 652728 diff --git a/brca/patches/TCGA-C8-A8HR-01Z-00-DX1.8E841CA8-1CE2-4242-AC5A-3247075CF8F4.h5 b/brca/patches/TCGA-C8-A8HR-01Z-00-DX1.8E841CA8-1CE2-4242-AC5A-3247075CF8F4.h5 new file mode 100644 index 0000000000000000000000000000000000000000..19f3462ecfb919b462258c0e77d008c1c07e36d1 --- /dev/null +++ b/brca/patches/TCGA-C8-A8HR-01Z-00-DX1.8E841CA8-1CE2-4242-AC5A-3247075CF8F4.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:50805083ab8d32f8190ec6c7c6fd27c957fb6117e840248e9eb7b583842a8b29 +size 350472 diff --git a/brca/patches/TCGA-D8-A1J8-01Z-00-DX1.EADAB43A-87C6-47FA-9120-25B69E23366D.h5 b/brca/patches/TCGA-D8-A1J8-01Z-00-DX1.EADAB43A-87C6-47FA-9120-25B69E23366D.h5 new file mode 100644 index 0000000000000000000000000000000000000000..e0fb521eee49dad9b10cc90c02b2f410fc5ce0d6 --- /dev/null +++ b/brca/patches/TCGA-D8-A1J8-01Z-00-DX1.EADAB43A-87C6-47FA-9120-25B69E23366D.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:02c5afacec42b4773ad1154fd307510e151d7c5cdb077c4fe5c596b140c10186 +size 948624 diff --git a/brca/patches/TCGA-D8-A1JL-01Z-00-DX1.FE3F0C6B-F98A-4036-BF9A-25A8CC66B1FD.h5 b/brca/patches/TCGA-D8-A1JL-01Z-00-DX1.FE3F0C6B-F98A-4036-BF9A-25A8CC66B1FD.h5 new file mode 100644 index 0000000000000000000000000000000000000000..da9e0a3516b5f98b9f58366284296ef4dab19df3 --- /dev/null +++ b/brca/patches/TCGA-D8-A1JL-01Z-00-DX1.FE3F0C6B-F98A-4036-BF9A-25A8CC66B1FD.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c9afe89a6ea878d68406b81de00e3ea2402f92108a5f6a312c8793f17ea4bcb4 +size 1622552 diff --git a/brca/patches/TCGA-D8-A1JU-01Z-00-DX1.355D93B4-E69E-417C-B3D1-3E1AAF1E02FE.h5 b/brca/patches/TCGA-D8-A1JU-01Z-00-DX1.355D93B4-E69E-417C-B3D1-3E1AAF1E02FE.h5 new file mode 100644 index 0000000000000000000000000000000000000000..49657c39daed5a97dcf924891de645364503d205 --- /dev/null +++ b/brca/patches/TCGA-D8-A1JU-01Z-00-DX1.355D93B4-E69E-417C-B3D1-3E1AAF1E02FE.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:72190f4b76a0d2236507c7c6352b899b06e9100eb55540d363a2dbead477bd2c +size 555280 diff --git a/brca/patches/TCGA-D8-A1XV-01Z-00-DX1.D0D78B02-2A0D-4107-8083-D2FE1D3F1207.h5 b/brca/patches/TCGA-D8-A1XV-01Z-00-DX1.D0D78B02-2A0D-4107-8083-D2FE1D3F1207.h5 new file mode 100644 index 0000000000000000000000000000000000000000..d75e51068921a8a739a874bf420307c39ffdbf0d --- /dev/null +++ b/brca/patches/TCGA-D8-A1XV-01Z-00-DX1.D0D78B02-2A0D-4107-8083-D2FE1D3F1207.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:9c5c961a8b996a6a13f82bde6779125e399b82626de465192bea61d56c87bcf1 +size 796848 diff --git a/brca/patches/TCGA-D8-A1XZ-01Z-00-DX1.8E51A61D-B01C-4A52-8F5D-44D2ABCA46FC.h5 b/brca/patches/TCGA-D8-A1XZ-01Z-00-DX1.8E51A61D-B01C-4A52-8F5D-44D2ABCA46FC.h5 new file mode 100644 index 0000000000000000000000000000000000000000..ee6bc1b1aa4551734f76245a5ac954fd96385b7e --- /dev/null +++ b/brca/patches/TCGA-D8-A1XZ-01Z-00-DX1.8E51A61D-B01C-4A52-8F5D-44D2ABCA46FC.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:0babf819d57afe07bf5fb108d9fc4627effbc0067e3539a850e7d6390722d4a4 +size 672856 diff --git a/brca/patches/TCGA-D8-A27R-01Z-00-DX2.31F47D8F-DFD7-42AE-BBBA-7DBBA12FA97D.h5 b/brca/patches/TCGA-D8-A27R-01Z-00-DX2.31F47D8F-DFD7-42AE-BBBA-7DBBA12FA97D.h5 new file mode 100644 index 0000000000000000000000000000000000000000..c2df06de2c2a707e34bebfb72836296a8982d80f --- /dev/null +++ b/brca/patches/TCGA-D8-A27R-01Z-00-DX2.31F47D8F-DFD7-42AE-BBBA-7DBBA12FA97D.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:e495a0eddc3afd4fc33fa95ac4c6fa6cc5ffd27d7a918c9e06b3b48c8ae86b46 +size 1148560 diff --git a/brca/patches/TCGA-D8-A3Z6-01Z-00-DX1.4076A770-5901-4325-85C3-AF7B192272F5.h5 b/brca/patches/TCGA-D8-A3Z6-01Z-00-DX1.4076A770-5901-4325-85C3-AF7B192272F5.h5 new file mode 100644 index 0000000000000000000000000000000000000000..3834af6c60bef186d8071cf679230edf5d9afb0f --- /dev/null +++ b/brca/patches/TCGA-D8-A3Z6-01Z-00-DX1.4076A770-5901-4325-85C3-AF7B192272F5.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fa543e463a767b6f4f2ea53dc203be9da09114441b10d2c4daa67e658d213a37 +size 620992 diff --git a/brca/patches/TCGA-E2-A10C-01Z-00-DX1.29A2B20B-29C6-4491-ADAB-0584C772EF25.h5 b/brca/patches/TCGA-E2-A10C-01Z-00-DX1.29A2B20B-29C6-4491-ADAB-0584C772EF25.h5 new file mode 100644 index 0000000000000000000000000000000000000000..d424becfdac0548c0e854456e5a338f1a1e927c1 --- /dev/null +++ b/brca/patches/TCGA-E2-A10C-01Z-00-DX1.29A2B20B-29C6-4491-ADAB-0584C772EF25.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:677fa42131755f19581a88a5d73c4054f044f881c8d0454c53db72faada05477 +size 621392 diff --git a/brca/patches/TCGA-E2-A14P-01Z-00-DX1.663B02FF-C64B-41A6-8685-FD61CD76F9C6.h5 b/brca/patches/TCGA-E2-A14P-01Z-00-DX1.663B02FF-C64B-41A6-8685-FD61CD76F9C6.h5 new file mode 100644 index 0000000000000000000000000000000000000000..ace9f73311809458a5310138a466a657a029394b --- /dev/null +++ b/brca/patches/TCGA-E2-A14P-01Z-00-DX1.663B02FF-C64B-41A6-8685-FD61CD76F9C6.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:2c28969e3f062d59d171851617b01cee3ca7b05436ddf85f63ecd765ddfc93cc +size 877496 diff --git a/brca/patches/TCGA-E2-A155-01Z-00-DX1.A5AF232A-61BB-4FDC-ABF9-2FE9BA461BDC.h5 b/brca/patches/TCGA-E2-A155-01Z-00-DX1.A5AF232A-61BB-4FDC-ABF9-2FE9BA461BDC.h5 new file mode 100644 index 0000000000000000000000000000000000000000..02632aaf4ad6dc2a0a3f0215e018d491893251c9 --- /dev/null +++ b/brca/patches/TCGA-E2-A155-01Z-00-DX1.A5AF232A-61BB-4FDC-ABF9-2FE9BA461BDC.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6c0f807a9f970b35cac6c7d146d21abf910588f543abb8f2d60ae06f622b8ae2 +size 910184 diff --git a/brca/patches/TCGA-E2-A15P-01Z-00-DX1.4C7F95DC-B319-4A78-8F34-8CB9166EA6A8.h5 b/brca/patches/TCGA-E2-A15P-01Z-00-DX1.4C7F95DC-B319-4A78-8F34-8CB9166EA6A8.h5 new file mode 100644 index 0000000000000000000000000000000000000000..f37b914bb90a74d6afa557c71196ae575c70142c --- /dev/null +++ b/brca/patches/TCGA-E2-A15P-01Z-00-DX1.4C7F95DC-B319-4A78-8F34-8CB9166EA6A8.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:1970cf7e4058dac471b6b94b1adeb15d8f43e9f0e49bcc3182d236d62b69f792 +size 550784 diff --git a/brca/patches/TCGA-E2-A15S-01Z-00-DX1.77CFA95F-F1AE-41BD-BAF8-BCA6F0DFA3A3.h5 b/brca/patches/TCGA-E2-A15S-01Z-00-DX1.77CFA95F-F1AE-41BD-BAF8-BCA6F0DFA3A3.h5 new file mode 100644 index 0000000000000000000000000000000000000000..725a40db48c4d0dcd14e85a031d46ee4278c9c8a --- /dev/null +++ b/brca/patches/TCGA-E2-A15S-01Z-00-DX1.77CFA95F-F1AE-41BD-BAF8-BCA6F0DFA3A3.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:46a4f3f593c3a115c64220a67b20b95902f3f16e63accfa43b5a78428d2b4fb7 +size 923792 diff --git a/brca/patches/TCGA-E2-A15T-01Z-00-DX1.23913E37-53A8-4E11-9B64-CDD016F6D87A.h5 b/brca/patches/TCGA-E2-A15T-01Z-00-DX1.23913E37-53A8-4E11-9B64-CDD016F6D87A.h5 new file mode 100644 index 0000000000000000000000000000000000000000..2c3a27a83b648e78dace36383ffc651ea38e1a94 --- /dev/null +++ b/brca/patches/TCGA-E2-A15T-01Z-00-DX1.23913E37-53A8-4E11-9B64-CDD016F6D87A.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:e29a11bc9a8fdf8db51a0dc26d28fb8bc09552f844aeb99e04d2e2bd19720318 +size 1236488 diff --git a/brca/patches/TCGA-E2-A1BC-01Z-00-DX1.FD19F2F8-497F-4D7D-97C6-271DC6B75173.h5 b/brca/patches/TCGA-E2-A1BC-01Z-00-DX1.FD19F2F8-497F-4D7D-97C6-271DC6B75173.h5 new file mode 100644 index 0000000000000000000000000000000000000000..7846414f0f46bdf0a4774375098d5328bde84d57 --- /dev/null +++ b/brca/patches/TCGA-E2-A1BC-01Z-00-DX1.FD19F2F8-497F-4D7D-97C6-271DC6B75173.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b9ec5b40830f5a135de42decb951715a79ab6661aa5b909d046666a660e75351 +size 941256 diff --git a/brca/patches/TCGA-E2-A1LA-01Z-00-DX1.AE49E943-B830-4ED9-B09E-E499441BC2EC.h5 b/brca/patches/TCGA-E2-A1LA-01Z-00-DX1.AE49E943-B830-4ED9-B09E-E499441BC2EC.h5 new file mode 100644 index 0000000000000000000000000000000000000000..320b2d84c219e97c90db49f8f1c9acfa5bcf30aa --- /dev/null +++ b/brca/patches/TCGA-E2-A1LA-01Z-00-DX1.AE49E943-B830-4ED9-B09E-E499441BC2EC.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cb1e5fda3885ceedf7bd52fc3210086a79012ec8352e6d9469813ae936a3368a +size 867600 diff --git a/brca/patches/TCGA-E2-A2P6-01Z-00-DX1.9D8060AA-881F-49FF-AEF5-B40A3625A44A.h5 b/brca/patches/TCGA-E2-A2P6-01Z-00-DX1.9D8060AA-881F-49FF-AEF5-B40A3625A44A.h5 new file mode 100644 index 0000000000000000000000000000000000000000..2869f4c67e49a2a223dd680a6cf06aaefb2c8425 --- /dev/null +++ b/brca/patches/TCGA-E2-A2P6-01Z-00-DX1.9D8060AA-881F-49FF-AEF5-B40A3625A44A.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d099f446ec797ae284b0d55cb8a8a697f801a89422f5b26b3af2a21812b6a9cd +size 1036176 diff --git a/brca/patches/TCGA-E9-A1N4-01Z-00-DX1.71c8d4a5-ec99-4012-9fe2-ddb3349ad5bc.h5 b/brca/patches/TCGA-E9-A1N4-01Z-00-DX1.71c8d4a5-ec99-4012-9fe2-ddb3349ad5bc.h5 new file mode 100644 index 0000000000000000000000000000000000000000..6d3d3b27a0bd288bc4bf470d9b3f8959de097f56 --- /dev/null +++ b/brca/patches/TCGA-E9-A1N4-01Z-00-DX1.71c8d4a5-ec99-4012-9fe2-ddb3349ad5bc.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:2306b34d8fa8936fd35af625af141e4a5ea5c7d9a022a1b195e3ba279ade7019 +size 680296 diff --git a/brca/patches/TCGA-E9-A1R0-01Z-00-DX1.187C58EA-132E-4B3C-BAD0-7F59101D5C4D.h5 b/brca/patches/TCGA-E9-A1R0-01Z-00-DX1.187C58EA-132E-4B3C-BAD0-7F59101D5C4D.h5 new file mode 100644 index 0000000000000000000000000000000000000000..ad16afb1d2705857afe213618788dde017f2bc77 --- /dev/null +++ b/brca/patches/TCGA-E9-A1R0-01Z-00-DX1.187C58EA-132E-4B3C-BAD0-7F59101D5C4D.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:097f4b3927a8412b33b6b4c8b738bb0dbf9428253d9eb3f3defde30d0956adc8 +size 520928 diff --git a/brca/patches/TCGA-E9-A1R2-01Z-00-DX1.5529C856-4F4F-4F17-94A2-5CEF94A940EB.h5 b/brca/patches/TCGA-E9-A1R2-01Z-00-DX1.5529C856-4F4F-4F17-94A2-5CEF94A940EB.h5 new file mode 100644 index 0000000000000000000000000000000000000000..270bd4b0395ef4232df9f3a0b4137c2de18c37fb --- /dev/null +++ b/brca/patches/TCGA-E9-A1R2-01Z-00-DX1.5529C856-4F4F-4F17-94A2-5CEF94A940EB.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f73ccb5e82314b79c6fcf8b0d0846e74f839016053302d4224d6e6b9d739d5df +size 608768 diff --git a/brca/patches/TCGA-E9-A22B-01Z-00-DX1.01692f98-bd7c-4b02-990c-53560276baa0.h5 b/brca/patches/TCGA-E9-A22B-01Z-00-DX1.01692f98-bd7c-4b02-990c-53560276baa0.h5 new file mode 100644 index 0000000000000000000000000000000000000000..0c2ef008ee199e730db0cd8fe39d6c68de15c6cf --- /dev/null +++ b/brca/patches/TCGA-E9-A22B-01Z-00-DX1.01692f98-bd7c-4b02-990c-53560276baa0.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b30cc839dd681ffd8026cdd271f03c15c0b2cdb12e88b179933c8b74be8c633a +size 636024 diff --git a/brca/patches/TCGA-E9-A22G-01Z-00-DX1.2b47e321-7910-40ec-ad1c-c4e08ed26334.h5 b/brca/patches/TCGA-E9-A22G-01Z-00-DX1.2b47e321-7910-40ec-ad1c-c4e08ed26334.h5 new file mode 100644 index 0000000000000000000000000000000000000000..4782eb8ea43059e31d6e528a6dbd16d730868a1f --- /dev/null +++ b/brca/patches/TCGA-E9-A22G-01Z-00-DX1.2b47e321-7910-40ec-ad1c-c4e08ed26334.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:4a15fd12b17eca1ed90a9859e330c549ce95c48f179f2b02531fa28be865a913 +size 846152 diff --git a/brca/patches/TCGA-E9-A3HO-01Z-00-DX1.8C897764-4CD4-40DE-9F8B-7F1BE5FF89C7.h5 b/brca/patches/TCGA-E9-A3HO-01Z-00-DX1.8C897764-4CD4-40DE-9F8B-7F1BE5FF89C7.h5 new file mode 100644 index 0000000000000000000000000000000000000000..8a6adcb475a9995dc9309568331a572ef8f290a0 --- /dev/null +++ b/brca/patches/TCGA-E9-A3HO-01Z-00-DX1.8C897764-4CD4-40DE-9F8B-7F1BE5FF89C7.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:95932446072559fc4e96aa0bd01ce2f894f81e8a31905608293db16b177c0b7c +size 790392 diff --git a/brca/patches/TCGA-EW-A1J1-01Z-00-DX1.FFC2D5DB-E6D0-4143-A1E7-0A2027846C8C.h5 b/brca/patches/TCGA-EW-A1J1-01Z-00-DX1.FFC2D5DB-E6D0-4143-A1E7-0A2027846C8C.h5 new file mode 100644 index 0000000000000000000000000000000000000000..2357bb47d7d0e35bf9b2414273a16af2512aefa7 --- /dev/null +++ b/brca/patches/TCGA-EW-A1J1-01Z-00-DX1.FFC2D5DB-E6D0-4143-A1E7-0A2027846C8C.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:cfb87bdbdad3ae016f5f7bf39006a057fade56543802fd647152bb34b88a195e +size 1014384 diff --git a/brca/patches/TCGA-EW-A1J6-01Z-00-DX1.F668E978-13B6-4284-9522-37C65C57A21A.h5 b/brca/patches/TCGA-EW-A1J6-01Z-00-DX1.F668E978-13B6-4284-9522-37C65C57A21A.h5 new file mode 100644 index 0000000000000000000000000000000000000000..02e43d91d890ec298b8b28779ec18d4ac124ee10 --- /dev/null +++ b/brca/patches/TCGA-EW-A1J6-01Z-00-DX1.F668E978-13B6-4284-9522-37C65C57A21A.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b04ef5b0cd6ec19f8f67fe5590c09a62bbd0ee72c01f56cd505f11c460953efe +size 758368 diff --git a/brca/patches/TCGA-EW-A1OW-01Z-00-DX1.97888686-EBB6-4B13-AB5D-452F475E865B.h5 b/brca/patches/TCGA-EW-A1OW-01Z-00-DX1.97888686-EBB6-4B13-AB5D-452F475E865B.h5 new file mode 100644 index 0000000000000000000000000000000000000000..26971b21cfd6142d9e6c6b2a78eac424537934f3 --- /dev/null +++ b/brca/patches/TCGA-EW-A1OW-01Z-00-DX1.97888686-EBB6-4B13-AB5D-452F475E865B.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:68aefdf77a2e2cff83cf4acb3859a4993ba3c5b2cf35e9a5e1c0687cb8a33e42 +size 808832 diff --git a/brca/patches/TCGA-EW-A1PB-01Z-00-DX1.B2E9B88F-C371-4821-9B7B-8A63BB120D95.h5 b/brca/patches/TCGA-EW-A1PB-01Z-00-DX1.B2E9B88F-C371-4821-9B7B-8A63BB120D95.h5 new file mode 100644 index 0000000000000000000000000000000000000000..9bbb537602b8f4c0755461304097e84b1ef1c552 --- /dev/null +++ b/brca/patches/TCGA-EW-A1PB-01Z-00-DX1.B2E9B88F-C371-4821-9B7B-8A63BB120D95.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c1985ee30434f947fa60df3f4b7002f2c121311635b8cb83194288421021fdb7 +size 1014384 diff --git a/brca/patches/TCGA-EW-A1PC-01Z-00-DX1.45369705-AD49-419F-A0F0-EC51473BBAB9.h5 b/brca/patches/TCGA-EW-A1PC-01Z-00-DX1.45369705-AD49-419F-A0F0-EC51473BBAB9.h5 new file mode 100644 index 0000000000000000000000000000000000000000..19b8bb342fb9f6d044c933b482aa8253be9fd268 --- /dev/null +++ b/brca/patches/TCGA-EW-A1PC-01Z-00-DX1.45369705-AD49-419F-A0F0-EC51473BBAB9.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:042db76fd1641a37cb05eb15286f1b5854f5cae6898961327c1929fc4bb038c8 +size 1495608 diff --git a/brca/patches/TCGA-GM-A2DF-01Z-00-DX1.CD0BE6D7-2DB3-4193-84CC-F9BE7BF18CC2.h5 b/brca/patches/TCGA-GM-A2DF-01Z-00-DX1.CD0BE6D7-2DB3-4193-84CC-F9BE7BF18CC2.h5 new file mode 100644 index 0000000000000000000000000000000000000000..72e2e4bdb9283b48292a89a9392c3fa2f5d9d20a --- /dev/null +++ b/brca/patches/TCGA-GM-A2DF-01Z-00-DX1.CD0BE6D7-2DB3-4193-84CC-F9BE7BF18CC2.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6f32e1b7aca39de909d5ea34935ab598dfd3f1625b1a759acdc4ac5b91e1610d +size 807160 diff --git a/brca/patches/TCGA-GM-A3NY-01Z-00-DX1.BEED8B8F-5A1B-4CE2-BB5D-A7ED40551AE4.h5 b/brca/patches/TCGA-GM-A3NY-01Z-00-DX1.BEED8B8F-5A1B-4CE2-BB5D-A7ED40551AE4.h5 new file mode 100644 index 0000000000000000000000000000000000000000..460a87fb1f1c0ecf9707c48fb5f818a07167cb47 --- /dev/null +++ b/brca/patches/TCGA-GM-A3NY-01Z-00-DX1.BEED8B8F-5A1B-4CE2-BB5D-A7ED40551AE4.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:51d6620be7e3d010b1a45951ea722d6ad97e22f5a8b1e933e5ae39fb6eade1fa +size 548352 diff --git a/brca/patches/TCGA-LD-A66U-01Z-00-DX1.AEC25C62-0519-47ED-A85B-2A964BA2BA87.h5 b/brca/patches/TCGA-LD-A66U-01Z-00-DX1.AEC25C62-0519-47ED-A85B-2A964BA2BA87.h5 new file mode 100644 index 0000000000000000000000000000000000000000..ea14b4ba7bff45c06ff81a76fdf0bd3e67137728 --- /dev/null +++ b/brca/patches/TCGA-LD-A66U-01Z-00-DX1.AEC25C62-0519-47ED-A85B-2A964BA2BA87.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a46c794239ce6f745cb61382e42c9d9d6d43405c32b786e7cc0566b747c240da +size 706304 diff --git a/brca/patches/TCGA-OL-A5RZ-01Z-00-DX1.6394C05E-1C34-4F4B-8859-F5E961E7EFF9.h5 b/brca/patches/TCGA-OL-A5RZ-01Z-00-DX1.6394C05E-1C34-4F4B-8859-F5E961E7EFF9.h5 new file mode 100644 index 0000000000000000000000000000000000000000..2f4a12e443eb8e1315eff231fb45259088dbc474 --- /dev/null +++ b/brca/patches/TCGA-OL-A5RZ-01Z-00-DX1.6394C05E-1C34-4F4B-8859-F5E961E7EFF9.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:2bf62c9711a25f10139bbb2d4b56f4e4ca053e7beb03c4567ca2f49d87269417 +size 88192 diff --git a/brca/patches/TCGA-PE-A5DC-01Z-00-DX1.8E6953AD-C14A-43F5-B062-E31AB13C7BDF.h5 b/brca/patches/TCGA-PE-A5DC-01Z-00-DX1.8E6953AD-C14A-43F5-B062-E31AB13C7BDF.h5 new file mode 100644 index 0000000000000000000000000000000000000000..c2574e2dfa111f4bc7f6d253bbc1de17ce7c6a16 --- /dev/null +++ b/brca/patches/TCGA-PE-A5DC-01Z-00-DX1.8E6953AD-C14A-43F5-B062-E31AB13C7BDF.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:2465bb7fd58274d126b2cc9cacdc390bb50c4d383b27d3170a61118f38e7ed49 +size 403504 diff --git a/brca/patches/TCGA-S3-AA12-01Z-00-DX1.2A991B9F-E7E6-410B-B0BF-635E3CC40C7E.h5 b/brca/patches/TCGA-S3-AA12-01Z-00-DX1.2A991B9F-E7E6-410B-B0BF-635E3CC40C7E.h5 new file mode 100644 index 0000000000000000000000000000000000000000..3a6dbbdece44340e15b8ec99554cb0221e036b5f --- /dev/null +++ b/brca/patches/TCGA-S3-AA12-01Z-00-DX1.2A991B9F-E7E6-410B-B0BF-635E3CC40C7E.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:475833eca6ee04eeecedb94d65a623814d53b71b162adb9c06ba38da10ad8dec +size 1232544 diff --git a/brca/patches/TCGA-S3-AA14-01Z-00-DX1.000A865F-19E6-4018-9352-BFA54EF0CE31.h5 b/brca/patches/TCGA-S3-AA14-01Z-00-DX1.000A865F-19E6-4018-9352-BFA54EF0CE31.h5 new file mode 100644 index 0000000000000000000000000000000000000000..5290ff6d98485a12991adf32a4057f892f235b32 --- /dev/null +++ b/brca/patches/TCGA-S3-AA14-01Z-00-DX1.000A865F-19E6-4018-9352-BFA54EF0CE31.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:723d76c9460e7112d5f4fc851b3c33593e3382192ad45fb6436ce1e0e681046a +size 1197472 diff --git a/brca/patches/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35.h5 b/brca/patches/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35.h5 new file mode 100644 index 0000000000000000000000000000000000000000..8095b260db74e13e356ab85d7e3bc3afb2eefbd9 --- /dev/null +++ b/brca/patches/TCGA-WT-AB44-01Z-00-DX1.B6ECEA7C-DA26-4B34-88CE-6834631DFA35.h5 @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:e6f83d024ba7173a974356199320b1feba79a3d89d241b87fac3fd600c6cb169 +size 281224