Datasets:
Upload 4 files
Browse files
README.md
CHANGED
|
@@ -1,5 +1,7 @@
|
|
| 1 |
---
|
| 2 |
license: cc-by-4.0
|
|
|
|
|
|
|
| 3 |
tags:
|
| 4 |
- chemistry
|
| 5 |
- smiles
|
|
@@ -13,9 +15,9 @@ size_categories:
|
|
| 13 |
|
| 14 |
This dataset is derived from the [Druglike molecule datasets for drug discovery](https://zenodo.org/records/7547717) dataset and has been canonicalized using RDKit (2024.9.4) to ensure structural consistency.
|
| 15 |
|
| 16 |
-
To enhance molecular diversity, 33% of the dataset was randomly sampled and augmented using RDKit’s `Chem.MolToRandomSmilesVect` function, following an approach similar to NVIDIA's *molmim* method for SMILES augmentation.
|
| 17 |
|
| 18 |
### Dataset Overview:
|
| 19 |
- **Source:** [](https://doi.org/10.5281/zenodo.7547717)
|
| 20 |
- **Canonicalization:** RDKit (2024.9.4)
|
| 21 |
-
- **Augmentation:** Random SMILES generation for 33% of the original dataset
|
|
|
|
| 1 |
---
|
| 2 |
license: cc-by-4.0
|
| 3 |
+
task_categories:
|
| 4 |
+
- feature-extraction
|
| 5 |
tags:
|
| 6 |
- chemistry
|
| 7 |
- smiles
|
|
|
|
| 15 |
|
| 16 |
This dataset is derived from the [Druglike molecule datasets for drug discovery](https://zenodo.org/records/7547717) dataset and has been canonicalized using RDKit (2024.9.4) to ensure structural consistency.
|
| 17 |
|
| 18 |
+
To enhance molecular diversity, 33% of the dataset was randomly sampled and augmented using RDKit’s `Chem.MolToRandomSmilesVect` function, following an approach similar to NVIDIA's *molmim* method for SMILES augmentation.
|
| 19 |
|
| 20 |
### Dataset Overview:
|
| 21 |
- **Source:** [](https://doi.org/10.5281/zenodo.7547717)
|
| 22 |
- **Canonicalization:** RDKit (2024.9.4)
|
| 23 |
+
- **Augmentation:** Random SMILES generation for 33% of the original dataset
|
test_druglike_QED-Pfizer_13M_less_than_128_tokens.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:dfe8b9a64bff9b43f5b08117b2d8e6145783425467d15ba3f0e01f00046da308
|
| 3 |
+
size 16667534
|
train_druglike_QED-Pfizer_13M_less_than_128_tokens.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:043fde6bf67e6689bbf5a5577652db2a51b01d92cc0efd82da1455c4ab7fa4b6
|
| 3 |
+
size 317468972
|
val_druglike_QED-Pfizer_13M_less_than_128_tokens.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:103c4b7fd5be34654780c1ce8840bd0564df8f3279445eaa4fa795ea44000f59
|
| 3 |
+
size 37529829
|