Upload 2 files
Browse files
README.md
ADDED
|
@@ -0,0 +1,31 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
---
|
| 2 |
+
tags:
|
| 3 |
+
- chemistry
|
| 4 |
+
- smiles
|
| 5 |
+
- molecules
|
| 6 |
+
- cheminformatics
|
| 7 |
+
- classification
|
| 8 |
+
pretty_name: Cocrystal Classification
|
| 9 |
+
size_categories:
|
| 10 |
+
- 1K<n<10K
|
| 11 |
+
---
|
| 12 |
+
|
| 13 |
+
# Cocrystal Classification
|
| 14 |
+
|
| 15 |
+
Binary classification dataset for predicting cocrystal formation given two small molecules represented as SMILES.
|
| 16 |
+
|
| 17 |
+
For single‑sequence encoder models (e.g., BERT‑style), we provide `smiles_concat`, which concatenates `smiles_a` and `smiles_b` with a period separator: `smiles_a.smiles_b`. For Bi-encoder and Cross‑encoder models, use the provided `smiles_a` and `smiles_b` fields directly.
|
| 18 |
+
|
| 19 |
+
## Source
|
| 20 |
+
- Original dataset page: https://sites.google.com/view/medardemswahili/publications-awards#h.kcrgyq3r642s
|
| 21 |
+
|
| 22 |
+
## Data fields
|
| 23 |
+
- `smiles_a` (string): Active Pharmaceutical Ingredient (API) SMILES. Unmodified from the source.
|
| 24 |
+
- `smiles_b` (string): Coformer SMILES. Unmodified from the source.
|
| 25 |
+
- `smiles_concat` (string): Concatenation of `smiles_a` and `smiles_b` with a period, for encoder models.
|
| 26 |
+
- `label` (int): Binary class, {0: None, 1: Cocrystal}.
|
| 27 |
+
|
| 28 |
+
## Citation
|
| 29 |
+
Mswahili, M.E.; Lee, M.-J.; Martin, G.L.; Kim, J.; Kim, P.; Choi, G.J.; Jeong, Y.-S. Cocrystal Prediction Using Machine Learning Models and Descriptors. Applied Sciences, 2021, 11, 1323. https://doi.org/10.3390/app11031323
|
| 30 |
+
|
| 31 |
+
Please cite the authors above if you use this dataset.
|