#!/usr/bin/env python3 """ Load CVE-KGRAG chunks into Qdrant with dense (transformer) + sparse (BM25) vectors. Standalone — does not require the upstream CVE-KGRAG codebase. Creates four collections: cve_chunks, mitre_techniques, capec_patterns, cwe_entries. Each point carries a named "dense" vector (640-dim by default, microsoft/harrier-oss-v1-270m) and a named "sparse" vector encoded from bm25/vocab.json. Resumes from checkpoint at /bm25/qdrant_checkpoint.json so you can re-run after an interruption without re-encoding everything. Usage: python load_qdrant.py --kb-dir ./data/knowledge_base \ --qdrant-url http://localhost:6333 \ --model microsoft/harrier-oss-v1-270m """ from __future__ import annotations import argparse import json import logging import math import re import sys import uuid from collections import Counter from pathlib import Path from typing import Any, Dict, Iterable, List, Tuple from qdrant_client import QdrantClient from qdrant_client.models import ( Distance, PointStruct, SparseIndexParams, SparseVector, SparseVectorParams, VectorParams, ) from sentence_transformers import SentenceTransformer from tqdm import tqdm logging.basicConfig(level=logging.INFO, format="%(asctime)s - %(levelname)s - %(message)s") log = logging.getLogger("load_qdrant") COLLECTIONS = { "cve": "cve_chunks", "mitre": "mitre_techniques", "capec": "capec_patterns", "cwe": "cwe_entries", } CHUNK_FILES = { "cve": "rag_exports/cve_chunks.json", "mitre": "rag_exports/mitre_chunks.json", "capec": "rag_exports/capec_chunks.json", "cwe": "rag_exports/cwe_chunks.json", } DENSE = "dense" SPARSE = "sparse" TOKEN_RE = re.compile(r"[a-z0-9][a-z0-9_-]*", re.IGNORECASE) K1 = 1.5 B = 0.75 def tokenize(text: str) -> List[str]: return [t.lower() for t in TOKEN_RE.findall(text or "")] def point_uuid(chunk_id: str) -> str: return str(uuid.uuid5(uuid.NAMESPACE_URL, chunk_id)) class SparseEncoder: """BM25-weighted sparse vectors using the prebuilt vocab.json.""" def __init__(self, vocab_path: Path, avgdl: float = 200.0) -> None: with vocab_path.open("r", encoding="utf-8") as f: raw = json.load(f) self.token_to_id = {t: int(v["id"]) for t, v in raw.items()} self.idf = {int(v["id"]): float(v["idf"]) for v in raw.values()} self.avgdl = avgdl def encode(self, text: str) -> SparseVector: tokens = tokenize(text) dl = len(tokens) or 1 tf = Counter(tokens) indices: List[int] = [] values: List[float] = [] for tok, count in tf.items(): tid = self.token_to_id.get(tok) if tid is None: continue num = count * (K1 + 1) den = count + K1 * (1 - B + B * dl / self.avgdl) indices.append(tid) values.append(self.idf[tid] * num / den) return SparseVector(indices=indices, values=values) def ensure_collections(client: QdrantClient, dense_dim: int) -> None: existing = {c.name for c in client.get_collections().collections} for name in COLLECTIONS.values(): if name in existing: log.info(f" {name} already exists") continue client.create_collection( collection_name=name, vectors_config={DENSE: VectorParams(size=dense_dim, distance=Distance.COSINE)}, sparse_vectors_config={SPARSE: SparseVectorParams(index=SparseIndexParams())}, ) log.info(f" created {name}") def sanitize_payload(p: Dict[str, Any]) -> Dict[str, Any]: """Qdrant indexes scalars and flat lists fine; nested dicts become JSON strings.""" out: Dict[str, Any] = {} for k, v in p.items(): if isinstance(v, (str, int, float, bool)) or v is None: out[k] = v elif isinstance(v, list) and all(isinstance(x, (str, int, float, bool)) for x in v): out[k] = v else: out[k] = json.dumps(v, ensure_ascii=False) return out def upsert_collection( client: QdrantClient, collection: str, chunks: List[Dict[str, Any]], dense_model: SentenceTransformer, sparse: SparseEncoder, *, batch: int = 2000, resume_from: int = 0, ) -> int: total = len(chunks) log.info(f" → {collection}: {total - resume_from:,} / {total:,} chunks to encode") for start in tqdm(range(resume_from, total, batch), desc=collection): end = min(start + batch, total) slab = chunks[start:end] texts = [c["text"] for c in slab] dense = dense_model.encode(texts, batch_size=128, show_progress_bar=False, convert_to_numpy=True, normalize_embeddings=True) points = [] for c, d in zip(slab, dense): points.append(PointStruct( id=point_uuid(c["id"]), vector={ DENSE: d.tolist(), SPARSE: sparse.encode(c["text"]), }, payload={**sanitize_payload(c.get("payload") or {}), "chunk_id": c["id"]}, )) client.upsert(collection_name=collection, points=points) yield end def load_chunks(path: Path) -> List[Dict[str, Any]]: with path.open("r", encoding="utf-8") as f: return json.load(f) def main() -> int: p = argparse.ArgumentParser(description=__doc__) p.add_argument("--kb-dir", required=True, type=Path, help="Knowledge-base root (containing rag_exports/ and bm25/)") p.add_argument("--qdrant-url", default="http://localhost:6333") p.add_argument("--qdrant-api-key", default=None) p.add_argument("--model", default="microsoft/harrier-oss-v1-270m", help="HF sentence-transformers model for dense vectors") p.add_argument("--device", default=None, help="cuda|cpu (auto if omitted)") p.add_argument("--batch", type=int, default=2000) p.add_argument("--recreate", action="store_true", help="Drop and recreate collections before loading") args = p.parse_args() if not (args.kb_dir / "rag_exports").is_dir(): log.error(f"--kb-dir missing rag_exports/: {args.kb_dir}") return 2 log.info(f"Loading dense model: {args.model}") dense_model = SentenceTransformer(args.model, device=args.device) dense_dim = dense_model.get_sentence_embedding_dimension() log.info(f" dim={dense_dim}") log.info("Loading sparse encoder") sparse = SparseEncoder(args.kb_dir / "bm25" / "vocab.json") client = QdrantClient(url=args.qdrant_url, api_key=args.qdrant_api_key, timeout=60) if args.recreate: log.info("Recreating collections") for name in COLLECTIONS.values(): try: client.delete_collection(name) except Exception: pass ensure_collections(client, dense_dim) ckpt_path = args.kb_dir / "bm25" / "qdrant_checkpoint.json" ckpt: Dict[str, int] = {} if ckpt_path.exists(): ckpt = json.loads(ckpt_path.read_text()) log.info(f"Resuming from checkpoint: {ckpt}") for key, rel in CHUNK_FILES.items(): path = args.kb_dir / rel if not path.exists(): log.warning(f" {path} missing, skipping {key}") continue chunks = load_chunks(path) col = COLLECTIONS[key] resume = ckpt.get(col, 0) if not args.recreate else 0 if resume >= len(chunks): log.info(f" {col}: already complete ({resume:,}/{len(chunks):,})") continue for done in upsert_collection( client, col, chunks, dense_model, sparse, batch=args.batch, resume_from=resume, ): ckpt[col] = done ckpt_path.write_text(json.dumps(ckpt)) log.info(f" {col}: complete") log.info("Done. Counts:") for name in COLLECTIONS.values(): info = client.get_collection(name) log.info(f" {name}: {info.points_count:,} points") return 0 if __name__ == "__main__": sys.exit(main())