Datasets:
Download depmap/manifest.json from EdisonScientific/EDB-Bio: direct link, hf CLI and curl.
- Browser
- Download file 1.21 kB
-
https://huggingface.co/datasets/EdisonScientific/EDB-Bio/resolve/main/depmap/manifest.json
- Command line
-
hf download hf://datasets/EdisonScientific/EDB-Bio/depmap/manifest.json
-
curl -L -o manifest.json https://huggingface.co/datasets/EdisonScientific/EDB-Bio/resolve/main/depmap/manifest.json
1.21 kB
| { | |
| "version": "v1", | |
| "n_records": 31997, | |
| "seed": 0, | |
| "n_genes": 2047, | |
| "n_cells": 1178, | |
| "n_lineages": 30, | |
| "label_counts": { | |
| "1": 16001, | |
| "0": 15996 | |
| }, | |
| "negative_type_counts": { | |
| "NaN": 16001, | |
| "inconclusive": 13609, | |
| "refuted": 2387 | |
| }, | |
| "sufficiency_counts": { | |
| "moderate": 10672, | |
| "rich": 10666, | |
| "poor": 10659 | |
| }, | |
| "ood_group_counts": { | |
| "iid": 27412, | |
| "gene": 3766, | |
| "lineage": 819 | |
| }, | |
| "split_counts": { | |
| "train": 29741, | |
| "val": 256, | |
| "test": 2000 | |
| }, | |
| "pool_size": 16, | |
| "mean_pool_len": 15.999312435540832, | |
| "params": { | |
| "out_dir": "ibis_data/depmap/episodes/v0.1.0-scaleup-32k", | |
| "depmap_dir": "ibis_data/raw/depmap/raw", | |
| "prism_dir": "ibis_data/raw/prism/raw", | |
| "n_episodes": 31997, | |
| "pool_size": 16, | |
| "relevant_fraction": 0.6, | |
| "frac_supported": 0.5, | |
| "frac_refuted_of_neg": 0.15, | |
| "frac_rich": 0.3333333333333333, | |
| "frac_poor": 0.3333333333333333, | |
| "rich_conclusive": 4, | |
| "moderate_conclusive": 1, | |
| "holdout_lineages": 3, | |
| "holdout_gene_frac": 0.12, | |
| "max_per_gene": 16, | |
| "selective_lo": 0.02, | |
| "selective_hi": 0.5, | |
| "test_size": 2000, | |
| "val_size": 256, | |
| "seed": 0 | |
| } | |
| } | |