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The dataset generation failed
Error code: DatasetGenerationError
Exception: CastError
Message: Couldn't cast
image: list<item: string>
child 0, item: string
conversations: list<item: struct<from: string, value: string>>
child 0, item: struct<from: string, value: string>
child 0, from: string
child 1, value: string
modality: string
reason: string
title: string
pmcid: string
caption: string
to
{'pmcid': Value('string'), 'title': Value('string'), 'conversations': List({'from': Value('string'), 'value': Value('string')}), 'reason': Value('string'), 'caption': Value('string'), 'image': List(Value('string'))}
because column names don't match
Traceback: Traceback (most recent call last):
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1872, in _prepare_split_single
for key, table in generator:
^^^^^^^^^
File "/usr/local/lib/python3.12/site-packages/datasets/packaged_modules/json/json.py", line 289, in _generate_tables
self._cast_table(pa_table, json_field_paths=json_field_paths),
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.12/site-packages/datasets/packaged_modules/json/json.py", line 124, in _cast_table
pa_table = table_cast(pa_table, self.info.features.arrow_schema)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2272, in table_cast
return cast_table_to_schema(table, schema)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2218, in cast_table_to_schema
raise CastError(
datasets.table.CastError: Couldn't cast
image: list<item: string>
child 0, item: string
conversations: list<item: struct<from: string, value: string>>
child 0, item: struct<from: string, value: string>
child 0, from: string
child 1, value: string
modality: string
reason: string
title: string
pmcid: string
caption: string
to
{'pmcid': Value('string'), 'title': Value('string'), 'conversations': List({'from': Value('string'), 'value': Value('string')}), 'reason': Value('string'), 'caption': Value('string'), 'image': List(Value('string'))}
because column names don't match
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1347, in compute_config_parquet_and_info_response
parquet_operations = convert_to_parquet(builder)
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 980, in convert_to_parquet
builder.download_and_prepare(
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 884, in download_and_prepare
self._download_and_prepare(
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 947, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1739, in _prepare_split
for job_id, done, content in self._prepare_split_single(
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1922, in _prepare_split_single
raise DatasetGenerationError("An error occurred while generating the dataset") from e
datasets.exceptions.DatasetGenerationError: An error occurred while generating the datasetNeed help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
pmcid string | title string | conversations list | reason string | caption string | image list |
|---|---|---|---|---|---|
PMC11585666 | Multimodal imaging findings of multiple evanescent white dot syndrome in COVID-19 patients | [{"from":"human","value":"A 20-year-old otherwise healthy man presented with a 3-day history of blur(...TRUNCATED) | "Initial consideration of toxoplasmosis was prompted by the retinal lesions but negative serology fo(...TRUNCATED) | "Figure 1: Color fundus photography demonstrates a normal dilated fundus exam of the right eye (A) b(...TRUNCATED) | ["/9j/4AAQSkZJRgABAQAAAQABAAD/2wBDAAIBAQEBAQIBAQECAgICAgQDAgICAgUEBAMEBgUGBgYFBgYGBwkIBgcJBwYGCAsICQ(...TRUNCATED) |
PMC7310602 | Novel REEP6 gene mutation associated with autosomal recessive retinitis pigmentosa | [{"from":"human","value":"A 33-year-old Cameroonian man was referred for evaluation of nyctalopia th(...TRUNCATED) | "The fundus examination revealed attenuated retinal vessels and intra-retinal bone spicule pigmentar(...TRUNCATED) | "Figure 1: Segregation analysis of the REEP6 variant in a pedigree indicates the proband with an arr(...TRUNCATED) | ["/9j/4AAQSkZJRgABAQAAAQABAAD/2wBDAAIBAQEBAQIBAQECAgICAgQDAgICAgUEBAMEBgUGBgYFBgYGBwkIBgcJBwYGCAsICQ(...TRUNCATED) |
PMC3364437 | "Sequential Intrastromal Corneal Ring Implantation and Cataract Surgery in a Severe Keratoconus Pati(...TRUNCATED) | [{"from":"human","value":"A 49-year-old man was referred to our clinic in September 2008 with blurre(...TRUNCATED) | "The markedly steepened central cornea and extremely elevated KISA% on topography are diagnostic of (...TRUNCATED) | "Figure 1: Preoperative and postoperative corneal topographies obtained with the CT-1000 (Shin-Nippo(...TRUNCATED) | ["/9j/4AAQSkZJRgABAQAAAQABAAD/2wBDAAIBAQEBAQIBAQECAgICAgQDAgICAgUEBAMEBgUGBgYFBgYGBwkIBgcJBwYGCAsICQ(...TRUNCATED) |
PMC3952380 | "Symmetrical Chorioretinal Colobomata with Craniovertebral Junction Anomalies in CHARGE Syndrome - A(...TRUNCATED) | [{"from":"human","value":"A 27-year-old woman presented with poor vision in both eyes and inability (...TRUNCATED) | "A diagnosis of CHARGE syndrome was arrived at by satisfying three major criteria prelisted by Blake(...TRUNCATED) | "Figure 1: Standard lateral-view photographs of the ears in a 27-year-old female with poor vision an(...TRUNCATED) | ["/9j/4AAQSkZJRgABAQAAAQABAAD/2wBDAAIBAQEBAQIBAQECAgICAgQDAgICAgUEBAMEBgUGBgYFBgYGBwkIBgcJBwYGCAsICQ(...TRUNCATED) |
PMC6766141 | Vogt–Koyanagi–Harada Syndrome in a Ugandan: Diagnostic and Therapeutic Challenges | [{"from":"human","value":"A 28-year-old HIV-negative Ugandan woman with no known chronic illness pre(...TRUNCATED) | "Infectious causes such as tuberculosis or syphilis and systemic autoimmune conditions are unlikely (...TRUNCATED) | "Figure 1: Multiple, symmetrical, chalk-white, sharply demarcated, nonscaly patches on both sides of(...TRUNCATED) | ["/9j/4AAQSkZJRgABAQAAAQABAAD/2wBDAAIBAQEBAQIBAQECAgICAgQDAgICAgUEBAMEBgUGBgYFBgYGBwkIBgcJBwYGCAsICQ(...TRUNCATED) |
PMC11557478 | Von Hippel-Lindau disease with ocular and multiple systemic findings | [{"from":"human","value":"A woman in her late 30s visited the outpatient department with a 6-month h(...TRUNCATED) | "The characteristic bilateral optic nerve head and peripheral retinal haemangioblastomas are strongl(...TRUNCATED) | "Figure 1: Fundus of the left eye showing blurred disc margins (papilloedema) with optic nerve head (...TRUNCATED) | ["/9j/4AAQSkZJRgABAQAAAQABAAD/2wBDAAIBAQEBAQIBAQECAgICAgQDAgICAgUEBAMEBgUGBgYFBgYGBwkIBgcJBwYGCAsICQ(...TRUNCATED) |
PMC11003551 | Multimodal Imaging of an Idiopathic Vascularized Epiretinal Membrane: A Case Report | [{"from":"human","value":"A 70-year-old man with no history of diabetes or hypertension and no ocula(...TRUNCATED) | "In this patient proliferative diabetic retinopathy was unlikely as he was non-diabetic and no areas(...TRUNCATED) | "Figure 1: Panels A and B multicolor imaging shows a semi-translucent membrane in the superior tempo(...TRUNCATED) | ["/9j/4AAQSkZJRgABAQAAAQABAAD/2wBDAAIBAQEBAQIBAQECAgICAgQDAgICAgUEBAMEBgUGBgYFBgYGBwkIBgcJBwYGCAsICQ(...TRUNCATED) |
PMC11101700 | "Fluctuating hypermetropia due to intraocular lens displacement caused by iris pigment epithelial cy(...TRUNCATED) | [{"from":"human","value":"A 66-year-old man presented with blurred vision in his left eye following (...TRUNCATED) | "Anterior segment optical coherence tomography demonstrates internal lucency, supporting a cystic st(...TRUNCATED) | "Figure 1: Slit lamp photographs of the left eye including low magnification (A) and high magnificat(...TRUNCATED) | ["/9j/4AAQSkZJRgABAQAAAQABAAD/2wBDAAIBAQEBAQIBAQECAgICAgQDAgICAgUEBAMEBgUGBgYFBgYGBwkIBgcJBwYGCAsICQ(...TRUNCATED) |
PMC3849312 | Free-floating Vitreous Cyst in an Adult Male | [{"from":"human","value":"A 50-year-old man was referred in December 2010 for a floating mass in his(...TRUNCATED) | "An acquired cyst was considered unlikely since he did not have any systemic disorder or history of (...TRUNCATED) | "Figure 1: Indirect ophthalmoscopy and posterior segment biomicroscopy of the right eye show a singl(...TRUNCATED) | ["/9j/4AAQSkZJRgABAQAAAQABAAD/2wBDAAIBAQEBAQIBAQECAgICAgQDAgICAgUEBAMEBgUGBgYFBgYGBwkIBgcJBwYGCAsICQ(...TRUNCATED) |
PMC10163424 | Corneal squamous neoplasia: masquerades and management outcomes at a rural eyecare centre | [{"from":"human","value":"A woman in her 20s presented to our rural eye centre with redness and wate(...TRUNCATED) | "Initially herpetic keratitis was considered given the epithelial lesion and redness but was exclude(...TRUNCATED) | "Figure 1A: Slit-lamp image of the right eye showing a congested eye and a temporal epithelial lesio(...TRUNCATED) | ["/9j/4AAQSkZJRgABAQAAAQABAAD/2wBDAAIBAQEBAQIBAQECAgICAgQDAgICAgUEBAMEBgUGBgYFBgYGBwkIBgcJBwYGCAsICQ(...TRUNCATED) |
End of preview.