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+ ---
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+ task_categories:
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+ - image-feature-extraction
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+ language:
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+ - en
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+ tags:
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+ - medical
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+ pretty_name: FlowOak
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+ size_categories:
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+ - 1K<n<10K
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+ ---
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+ 🧠 MRI Knee Dataset (Single-Coil)
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+ Dataset Name
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+
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+ FLowOak/mri_knee
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+
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+ 📌 Dataset Summary
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+
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+ FLowOak/mri_knee is a single-coil knee MRI dataset provided in HDF5 (.h5) format, intended for research in accelerated MRI reconstruction, compressed sensing, and deep learning–based image reconstruction.
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+
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+ This dataset is derived from the fastMRI initiative and adapted for single-coil reconstruction experiments, making it suitable for lightweight models, NAS-based architectures, and academic research where computational resources are limited.
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+
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+ 📚 Credits & Acknowledgements
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+
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+ ⚠️ Important Credit Notice
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+
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+ This dataset is based on data from the fastMRI dataset, a large-scale open dataset released by Facebook AI Research (FAIR) and NYU Langone Health.
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+
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+ Original Dataset:
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+
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+ fastMRI: An Open Dataset for Accelerated MRI
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+
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+ Authors: Zbontar et al.
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+
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+ Website: https://fastmri.org
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+
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+ License: fastMRI Data License
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+
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+ If you use FLowOak/mri_knee in your research, you must also cite fastMRI in addition to this dataset.
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+
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+ 📖 Recommended Citation
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+ Cite this dataset:
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+ @misc{flowoak_mri_knee,
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+ title={MRI Knee Dataset (Single-Coil)},
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+ author={FLowOak},
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+ year={2025},
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+ publisher={Hugging Face},
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+ howpublished={\url{https://huggingface.co/datasets/FLowOak/mri_knee}}
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+ }
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+
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+ Also cite fastMRI:
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+ @article{zbontar2018fastmri,
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+ title={fastMRI: An Open Dataset and Benchmarks for Accelerated MRI},
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+ author={Zbontar, Jure and Knoll, Florian and Sriram, Anuroop and others},
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+ journal={arXiv preprint arXiv:1811.08839},
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+ year={2018}
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+ }
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+
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+ 🧩 Dataset Structure
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+
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+ File format: .h5 (HDF5)
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+
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+ Imaging modality: MRI (Knee)
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+
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+ Acquisition: Single-coil
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+
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+ Domain: k-space and/or image domain (depending on file)
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+
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+ Resolution: Typically centered and cropped (e.g., 320×320)
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+
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+ ℹ️ The dataset does not currently expose predefined splits (train/validation/test) in the Hugging Face viewer. Users are expected to manage splits manually.
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+
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+ 📦 Expected HDF5 Contents
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+
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+ Each .h5 file may contain one or more of the following keys:
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+
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+ Key Description
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+ kspace Complex-valued undersampled k-space
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+ reconstruction_rss / image Reference image (if available)
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+ mask Sampling mask (optional)
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+
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+ ⚠️ Users should inspect each file using h5py to confirm exact structure.
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+
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+ 🚀 Intended Use
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+
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+ This dataset is intended for research and educational purposes only, including:
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+
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+ Single-coil MRI reconstruction
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+
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+ Compressed sensing MRI
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+
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+ Neural Architecture Search (NAS) for MRI
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+
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+ Image-domain and k-space domain reconstruction
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+
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+ Evaluation using PSNR, SSIM, NMSE
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+
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+ 🧪 Example Usage
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+ import h5py
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+
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+ with h5py.File("sample.h5", "r") as f:
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+ print(list(f.keys()))
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+ kspace = f["kspace"][()]
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+
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+ ⚙️ Preprocessing Recommendations
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+
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+ Convert complex data into real + imaginary channels
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+
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+ Normalize magnitude values
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+ Apply FFT/IFFT for domain conversion
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+
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+ Generate Cartesian or variable-density masks if not provided
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+
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+ ⚠️ Limitations
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+
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+ Single-coil only (not multi-coil clinical reconstruction)
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+
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+ No built-in Hugging Face dataset splits
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+ Requires custom data loading logic
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+
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+ Derived from fastMRI, so original fastMRI license terms apply
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+
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+ 🧾 License
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+
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+ This dataset follows the same usage restrictions as fastMRI.
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+ Please refer to the original fastMRI license:
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+
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+ 👉 https://fastmri.org/licensing/
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+
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+ ✅ Final Note
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+ This dataset is not a replacement for fastMRI, but a processed derivative designed to simplify single-coil MRI reconstruction research.