Datasets:

FelixOtt
/

industry_datasets

import numpy as np
from tqdm import tqdm


def getError(posx, posq, actualx, actualq):
    """ Calculates the position and rotation error """
    q1 = actualq / np.linalg.norm(actualq)
    q2 = posq / np.linalg.norm(posq)
    d = abs(np.sum(np.multiply(q1, q2)))
    theta = 2 * np.arccos(d) * 180 / np.pi
    errx = np.linalg.norm(actualx - posx)
    return errx, theta


# See https://answers.ros.org/question/388140/converting-a-rotation-matrix-to-quaternions-in-python/     ------------ #
def rotationMatrixToQuaternion(m):
    """ Takes a rotation matrix and converts it to the corresponding quaternions """
    t = np.matrix.trace(m)
    q = np.asarray([0.0, 0.0, 0.0, 0.0], dtype=np.float64)

    if t > 0:
        t = np.sqrt(t + 1)
        q[3] = 0.5 * t
        t = 0.5/t
        q[0] = (m[2, 1] - m[1, 2]) * t
        q[1] = (m[0, 2] - m[2, 0]) * t
        q[2] = (m[1, 0] - m[0, 1]) * t

    else:
        i = 0
        if m[1, 1] > m[0, 0]:
            i = 1
        if m[2, 2] > m[i, i]:
            i = 2
        j = (i+1) % 3
        k = (j+1) % 3

        t = np.sqrt(m[i, i] - m[j, j] - m[k, k] + 1)
        q[i] = 0.5 * t
        t = 0.5 / t
        q[3] = (m[k, j] - m[j, k]) * t
        q[j] = (m[j, i] + m[i, j]) * t
        q[k] = (m[k, i] + m[i, k]) * t

    return q
# ------------------------------------------------------------------------------------------------------------------- #


# See https://automaticaddison.com/how-to-convert-a-quaternion-to-a-rotation-matrix/     ---------------------------- #
def quaternion_rotation_matrix(Q):
    """
    Covert a quaternion into a full three-dimensional rotation matrix.
 
    Input
    :param Q: A 4 element array representing the quaternion (q0,q1,q2,q3) 
 
    Output
    :return: A 3x3 element matrix representing the full 3D rotation matrix. 
             This rotation matrix converts a point in the local reference 
             frame to a point in the global reference frame.
    """
    # Extract the values from Q
    q0 = Q[0]
    q1 = Q[1]
    q2 = Q[2]
    q3 = Q[3]
     
    # First row of the rotation matrix
    r00 = 2 * (q0 * q0 + q1 * q1) - 1
    r01 = 2 * (q1 * q2 - q0 * q3)
    r02 = 2 * (q1 * q3 + q0 * q2)
     
    # Second row of the rotation matrix
    r10 = 2 * (q1 * q2 + q0 * q3)
    r11 = 2 * (q0 * q0 + q2 * q2) - 1
    r12 = 2 * (q2 * q3 - q0 * q1)
     
    # Third row of the rotation matrix
    r20 = 2 * (q1 * q3 - q0 * q2)
    r21 = 2 * (q2 * q3 + q0 * q1)
    r22 = 2 * (q0 * q0 + q3 * q3) - 1
     
    # 3x3 rotation matrix
    rot_matrix = np.array([[r00, r01, r02],
                           [r10, r11, r12],
                           [r20, r21, r22]])
                            
    return rot_matrix
# ------------------------------------------------------------------------------------------------------------------- #


def get_training_data(dataset_abs, dataset_rel, backrot=False):
    """ Reads in the predicted absolute/relative pos/rotation data as well as the ground truth """
    print(dataset_abs, dataset_rel)
    fnames_abs = []
    lab_abs = []
    pred_abs = []
    # Read in the predicted absolute pos/rotation data and the ground truth
    with open(dataset_abs, "r") as f:
        for line in tqdm(f):
            fname = int(line.split(",")[0].split("frame_")[1].split(".png")[0])
            label = line.split("Label: ")[1].split(" Prediction")[0]
            pred = line.split("Prediction: ")[1].split("\n")[0]
            label_val = [float(x.split(": ")[1]) for x in label.split(", ")]
            pred_val = [float(x.split(": ")[1]) for x in pred.split(", ")]
            fnames_abs.append(fname)
            lab_abs.append(label_val)
            pred_abs.append(pred_val)
    lab_abs = np.array(lab_abs)
    pred_abs = np.array(pred_abs)
    fnames_rel = []
    lab_rel = []
    pred_rel = []
    # Read in the predicted relative pos/rotation data
    with open(dataset_rel, "r") as f:
        for line in tqdm(f):
            fname = int(line.split(",")[0].split("frame_")[1].split(".npy")[0])
            label = line.split("Label: ")[1].split(" Prediction")[0]
            pred = line.split("Prediction: ")[1].split("\n")[0]
            label_val = [float(x.split(": ")[1]) for x in label.split(", ")]
            pred_val = [float(x.split(": ")[1]) for x in pred.split(", ")]
            fnames_rel.append(fname)
            lab_rel.append(label_val)
            pred_rel.append(pred_val)
    lab_rel = np.array(lab_rel)
    pred_rel = np.array(pred_rel)
    abs_frames = []
    rel_frames = []
    abs_counter = 0
    rel_counter = 0
    # compares the names of the absolute and relative frames and ensures, that they are matched correctly
    while abs_counter < len(fnames_abs) and rel_counter < len(fnames_rel):
        if fnames_abs[abs_counter] == fnames_rel[rel_counter]:
            abs_frames.append(abs_counter)
            rel_frames.append(rel_counter)
            abs_counter += 1
            rel_counter += 1
        elif fnames_abs[abs_counter] > fnames_rel[rel_counter]:
            rel_counter += 1
        else:
            abs_counter += 1
    abs_frames = np.array(abs_frames)
    rel_frames = np.array(rel_frames)
    lab_abs = lab_abs[abs_frames]
    pred_abs = pred_abs[abs_frames]
    lab_rel = lab_rel[rel_frames]
    pred_rel = pred_rel[rel_frames]
    # if True, rotate the relative translation data from the perspective of the current image
    # back to the world coordinate
    if backrot:
        for i in range(len(pred_rel)):
            pred_rel[i][:3] = quaternion_rotation_matrix(pred_abs[i][-4:]).T @ pred_rel[i][:3]
    # Remove outside of area values at the beginning ---- #
    for j in range(2):
        if pred_abs[0, j] < -1 or pred_abs[0, j] > 46:
            pred_abs[0, j] = 0
    if pred_abs[0, 2] < -1 or pred_abs[0, 2] > 8:
        pred_abs[0, 2] = 0
    # Replace any outside of area values with the values of the previous step ---- #
    for i in range(len(pred_abs)):
        for j in range(2):
            if pred_abs[i, j] < -1 or pred_abs[i, j] > 46:
                pred_abs[i, j] = pred_abs[i - 1, j]
        if pred_abs[i, 2] < -1 or pred_abs[i, 2] > 8:
            pred_abs[i, 2] = pred_abs[i - 1, 2]
    # ---------------------------------- #
    # --- Check Error --- #
    # sanity check to see if the predicted values and ground truth values are aligned correctly
    errxs = []
    thetas = []
    for i in range(len(lab_abs)):
        posx = pred_abs[i][:3]
        posq = pred_abs[i][3:]
        actualx = lab_abs[i][:3]
        actualq = lab_abs[i][3:]
        errx, theta = getError(posx, posq, actualx, actualq)
        errxs.append(errx)
        thetas.append(theta)
    print(np.median(errxs), np.median(thetas))
    # ------------------- #
    return pred_abs, pred_rel, lab_abs, lab_rel


def limited_gen_data(pred_abs, pred_rel, gt_abs, gt_rel, time_size):
    """ Yields the input/ground truth data in batches of size 1. Can be used for evaluating the test dataset"""
    indices = range(1, len(pred_abs) + 1)
    for i in indices:
        if i >= time_size:
            input_data = np.concatenate([pred_abs[i - time_size: i], pred_rel[i - time_size: i]], axis=1)
        else:
            input_data = np.zeros((time_size, 14))
            input_data[-i:] = np.concatenate([pred_abs[:i], pred_rel[:i]], axis=1)
        output_data_x = gt_abs[i-1, :3]
        output_data_q = gt_abs[i-1, 3:]
        yield input_data, output_data_x, output_data_q


def gen_data(pred_abs, pred_rel, gt_abs, gt_rel, time_size):
    """ Data generator that randomly shuffles the training data and yields them as single elements. """
    while True:
        indices = list(range(1, len(pred_abs) + 1))
        np.random.shuffle(indices)
        for i in indices:
            if i >= time_size:
                input_data = np.concatenate([pred_abs[i - time_size: i], pred_rel[i - time_size: i]], axis=1)
            else:
                input_data = np.zeros((time_size, 14))
                input_data[-i:] = np.concatenate([pred_abs[:i], pred_rel[:i]], axis=1)
            output_data_x = gt_abs[i-1, :3]
            output_data_q = gt_abs[i-1, 3:]
            yield input_data, output_data_x, output_data_q
            

def gen_data_batch(pred_abs, pred_rel, gt_abs, gt_rel, batchSize, time_size):
    """ Uses the gen_data and yields batches of the size batchSize. """
    data_gen = gen_data(pred_abs, pred_rel, gt_abs, gt_rel, time_size)
    while True:
        image_batch = []
        pose_x_batch = []
        pose_q_batch = []
        for _ in range(batchSize):
            image, pose_x, pose_q = next(data_gen)
            image_batch.append(image)
            pose_x_batch.append(pose_x)
            pose_q_batch.append(pose_q)
        yield np.asarray(image_batch).astype("float32"),\
            np.concatenate([pose_x_batch, pose_q_batch], axis=1).astype("float32")

	import numpy as np
	from tqdm import tqdm


	def getError(posx, posq, actualx, actualq):
	""" Calculates the position and rotation error """
	q1 = actualq / np.linalg.norm(actualq)
	q2 = posq / np.linalg.norm(posq)
	d = abs(np.sum(np.multiply(q1, q2)))
	theta = 2 * np.arccos(d) * 180 / np.pi
	errx = np.linalg.norm(actualx - posx)
	return errx, theta


	# See https://answers.ros.org/question/388140/converting-a-rotation-matrix-to-quaternions-in-python/ ------------ #
	def rotationMatrixToQuaternion(m):
	""" Takes a rotation matrix and converts it to the corresponding quaternions """
	t = np.matrix.trace(m)
	q = np.asarray([0.0, 0.0, 0.0, 0.0], dtype=np.float64)

	if t > 0:
	t = np.sqrt(t + 1)
	q[3] = 0.5 * t
	t = 0.5/t
	q[0] = (m[2, 1] - m[1, 2]) * t
	q[1] = (m[0, 2] - m[2, 0]) * t
	q[2] = (m[1, 0] - m[0, 1]) * t

	else:
	i = 0
	if m[1, 1] > m[0, 0]:
	i = 1
	if m[2, 2] > m[i, i]:
	i = 2
	j = (i+1) % 3
	k = (j+1) % 3

	t = np.sqrt(m[i, i] - m[j, j] - m[k, k] + 1)
	q[i] = 0.5 * t
	t = 0.5 / t
	q[3] = (m[k, j] - m[j, k]) * t
	q[j] = (m[j, i] + m[i, j]) * t
	q[k] = (m[k, i] + m[i, k]) * t

	return q
	# ------------------------------------------------------------------------------------------------------------------- #


	# See https://automaticaddison.com/how-to-convert-a-quaternion-to-a-rotation-matrix/ ---------------------------- #
	def quaternion_rotation_matrix(Q):
	"""
	Covert a quaternion into a full three-dimensional rotation matrix.

	Input
	:param Q: A 4 element array representing the quaternion (q0,q1,q2,q3)

	Output
	:return: A 3x3 element matrix representing the full 3D rotation matrix.
	This rotation matrix converts a point in the local reference
	frame to a point in the global reference frame.
	"""
	# Extract the values from Q
	q0 = Q[0]
	q1 = Q[1]
	q2 = Q[2]
	q3 = Q[3]

	# First row of the rotation matrix
	r00 = 2 * (q0 * q0 + q1 * q1) - 1
	r01 = 2 * (q1 * q2 - q0 * q3)
	r02 = 2 * (q1 * q3 + q0 * q2)

	# Second row of the rotation matrix
	r10 = 2 * (q1 * q2 + q0 * q3)
	r11 = 2 * (q0 * q0 + q2 * q2) - 1
	r12 = 2 * (q2 * q3 - q0 * q1)

	# Third row of the rotation matrix
	r20 = 2 * (q1 * q3 - q0 * q2)
	r21 = 2 * (q2 * q3 + q0 * q1)
	r22 = 2 * (q0 * q0 + q3 * q3) - 1

	# 3x3 rotation matrix
	rot_matrix = np.array([[r00, r01, r02],
	[r10, r11, r12],
	[r20, r21, r22]])

	return rot_matrix
	# ------------------------------------------------------------------------------------------------------------------- #


	def get_training_data(dataset_abs, dataset_rel, backrot=False):
	""" Reads in the predicted absolute/relative pos/rotation data as well as the ground truth """
	print(dataset_abs, dataset_rel)
	fnames_abs = []
	lab_abs = []
	pred_abs = []
	# Read in the predicted absolute pos/rotation data and the ground truth
	with open(dataset_abs, "r") as f:
	for line in tqdm(f):
	fname = int(line.split(",")[0].split("frame_")[1].split(".png")[0])
	label = line.split("Label: ")[1].split(" Prediction")[0]
	pred = line.split("Prediction: ")[1].split("\n")[0]
	label_val = [float(x.split(": ")[1]) for x in label.split(", ")]
	pred_val = [float(x.split(": ")[1]) for x in pred.split(", ")]
	fnames_abs.append(fname)
	lab_abs.append(label_val)
	pred_abs.append(pred_val)
	lab_abs = np.array(lab_abs)
	pred_abs = np.array(pred_abs)
	fnames_rel = []
	lab_rel = []
	pred_rel = []
	# Read in the predicted relative pos/rotation data
	with open(dataset_rel, "r") as f:
	for line in tqdm(f):
	fname = int(line.split(",")[0].split("frame_")[1].split(".npy")[0])
	label = line.split("Label: ")[1].split(" Prediction")[0]
	pred = line.split("Prediction: ")[1].split("\n")[0]
	label_val = [float(x.split(": ")[1]) for x in label.split(", ")]
	pred_val = [float(x.split(": ")[1]) for x in pred.split(", ")]
	fnames_rel.append(fname)
	lab_rel.append(label_val)
	pred_rel.append(pred_val)
	lab_rel = np.array(lab_rel)
	pred_rel = np.array(pred_rel)
	abs_frames = []
	rel_frames = []
	abs_counter = 0
	rel_counter = 0
	# compares the names of the absolute and relative frames and ensures, that they are matched correctly
	while abs_counter < len(fnames_abs) and rel_counter < len(fnames_rel):
	if fnames_abs[abs_counter] == fnames_rel[rel_counter]:
	abs_frames.append(abs_counter)
	rel_frames.append(rel_counter)
	abs_counter += 1
	rel_counter += 1
	elif fnames_abs[abs_counter] > fnames_rel[rel_counter]:
	rel_counter += 1
	else:
	abs_counter += 1
	abs_frames = np.array(abs_frames)
	rel_frames = np.array(rel_frames)
	lab_abs = lab_abs[abs_frames]
	pred_abs = pred_abs[abs_frames]
	lab_rel = lab_rel[rel_frames]
	pred_rel = pred_rel[rel_frames]
	# if True, rotate the relative translation data from the perspective of the current image
	# back to the world coordinate
	if backrot:
	for i in range(len(pred_rel)):
	pred_rel[i][:3] = quaternion_rotation_matrix(pred_abs[i][-4:]).T @ pred_rel[i][:3]
	# Remove outside of area values at the beginning ---- #
	for j in range(2):
	if pred_abs[0, j] < -1 or pred_abs[0, j] > 46:
	pred_abs[0, j] = 0
	if pred_abs[0, 2] < -1 or pred_abs[0, 2] > 8:
	pred_abs[0, 2] = 0
	# Replace any outside of area values with the values of the previous step ---- #
	for i in range(len(pred_abs)):
	for j in range(2):
	if pred_abs[i, j] < -1 or pred_abs[i, j] > 46:
	pred_abs[i, j] = pred_abs[i - 1, j]
	if pred_abs[i, 2] < -1 or pred_abs[i, 2] > 8:
	pred_abs[i, 2] = pred_abs[i - 1, 2]
	# ---------------------------------- #
	# --- Check Error --- #
	# sanity check to see if the predicted values and ground truth values are aligned correctly
	errxs = []
	thetas = []
	for i in range(len(lab_abs)):
	posx = pred_abs[i][:3]
	posq = pred_abs[i][3:]
	actualx = lab_abs[i][:3]
	actualq = lab_abs[i][3:]
	errx, theta = getError(posx, posq, actualx, actualq)
	errxs.append(errx)
	thetas.append(theta)
	print(np.median(errxs), np.median(thetas))
	# ------------------- #
	return pred_abs, pred_rel, lab_abs, lab_rel


	def limited_gen_data(pred_abs, pred_rel, gt_abs, gt_rel, time_size):
	""" Yields the input/ground truth data in batches of size 1. Can be used for evaluating the test dataset"""
	indices = range(1, len(pred_abs) + 1)
	for i in indices:
	if i >= time_size:
	input_data = np.concatenate([pred_abs[i - time_size: i], pred_rel[i - time_size: i]], axis=1)
	else:
	input_data = np.zeros((time_size, 14))
	input_data[-i:] = np.concatenate([pred_abs[:i], pred_rel[:i]], axis=1)
	output_data_x = gt_abs[i-1, :3]
	output_data_q = gt_abs[i-1, 3:]
	yield input_data, output_data_x, output_data_q


	def gen_data(pred_abs, pred_rel, gt_abs, gt_rel, time_size):
	""" Data generator that randomly shuffles the training data and yields them as single elements. """
	while True:
	indices = list(range(1, len(pred_abs) + 1))
	np.random.shuffle(indices)
	for i in indices:
	if i >= time_size:
	input_data = np.concatenate([pred_abs[i - time_size: i], pred_rel[i - time_size: i]], axis=1)
	else:
	input_data = np.zeros((time_size, 14))
	input_data[-i:] = np.concatenate([pred_abs[:i], pred_rel[:i]], axis=1)
	output_data_x = gt_abs[i-1, :3]
	output_data_q = gt_abs[i-1, 3:]
	yield input_data, output_data_x, output_data_q


	def gen_data_batch(pred_abs, pred_rel, gt_abs, gt_rel, batchSize, time_size):
	""" Uses the gen_data and yields batches of the size batchSize. """
	data_gen = gen_data(pred_abs, pred_rel, gt_abs, gt_rel, time_size)
	while True:
	image_batch = []
	pose_x_batch = []
	pose_q_batch = []
	for _ in range(batchSize):
	image, pose_x, pose_q = next(data_gen)
	image_batch.append(image)
	pose_x_batch.append(pose_x)
	pose_q_batch.append(pose_q)
	yield np.asarray(image_batch).astype("float32"),\
	np.concatenate([pose_x_batch, pose_q_batch], axis=1).astype("float32")