File size: 949 Bytes
95d9557 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 | model:
dim: 256
depth: 6
heads: 8
dim_head: 32
vocab_size: 32
phase_dim: 16
max_seq_len: 32
dropout: 0.1
use_set_encoder: false
diffusion_type: flow_matching
num_timesteps: 1000
beta_schedule: cosine
use_ot_coupling: false
use_quadratic_weighting: true
training:
batch_size: 2048
lr: 0.0008
weight_decay: 0.01
epochs: 200
warmup_steps: 1000
flow_loss_weight: 32.0
lm_loss_weight: 0.0
max_grad_norm: 1.0
use_amp: true
early_stopping_patience: 20
save_every: 20
sampling:
method: euler
ode_steps: 20
sampling_steps: 50
use_ddim: true
temperature: 1.0
data:
# The best source experiment used the complete data range. This value is
# read by the peptide training workflow unless --threshold overrides it.
missing_threshold: 15
train_ratio: 0.9
val_ratio: 0.05
num_workers: 4
# Optional explicit splits. Leave null to split from --data_path.
val_path: null
test_path: null
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