OpenPhase / peptide /configs /dataset_contract.yaml
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Add PhaseFlow training data packages (llps, dpr, peptide).
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package: PhaseFlow-Peptide
task: short-peptide 4x4 PSSI phase-diagram prediction and conditional sequence modelling
source_table: data/raw/phase_diagram_original_scale.csv
source_columns:
sequence: AminoAcidSequence
phase_grid:
- group_11
- group_12
- group_13
- group_14
- group_21
- group_22
- group_23
- group_24
- group_31
- group_32
- group_33
- group_34
- group_41
- group_42
- group_43
- group_44
source_rows: 280778
sequence_length_range: [5, 20]
missing_value_encoding: NaN
generated_missing_split_views: data/raw/by_missing/missing_<0-15>.csv
generation_script: scripts/prepare_missing_splits.py