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requirements.txt
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| 1 |
+
# Core dependencies
|
| 2 |
+
beautifulsoup4>=4.12.0
|
| 3 |
+
requests>=2.31.0
|
| 4 |
+
selenium==4.15.2
|
| 5 |
+
pandas>=2.0.0
|
| 6 |
+
huggingface-hub>=0.19.4
|
| 7 |
+
tqdm>=4.66.1
|
| 8 |
+
python-dotenv>=1.0.0
|
| 9 |
+
webdriver-manager==4.0.1
|
| 10 |
+
numpy==1.24.3
|
| 11 |
+
scipy==1.10.1
|
| 12 |
+
|
| 13 |
+
# Document processing
|
| 14 |
+
PyPDF2==3.0.1
|
| 15 |
+
python-docx>=0.8.11
|
| 16 |
+
markdown>=3.5.1
|
| 17 |
+
pdfplumber>=0.10.2
|
| 18 |
+
tabula-py>=2.8.0
|
| 19 |
+
openpyxl>=3.1.2
|
| 20 |
+
|
| 21 |
+
# Scientific formats
|
| 22 |
+
astropy>=5.3.0
|
| 23 |
+
h5py>=3.10.0
|
| 24 |
+
netCDF4>=1.6.5
|
| 25 |
+
cfgrib>=0.9.10
|
| 26 |
+
vtk>=9.3.0
|
| 27 |
+
PyMuPDF>=1.23.7 # fitz
|
| 28 |
+
|
| 29 |
+
# Data formats
|
| 30 |
+
msgpack>=1.0.7
|
| 31 |
+
PyYAML>=6.0.1
|
| 32 |
+
toml>=0.10.2
|
| 33 |
+
epub>=0.5.2
|
| 34 |
+
python-pptx>=0.6.21
|
| 35 |
+
|
| 36 |
+
# Image processing
|
| 37 |
+
Pillow>=10.1.0
|
| 38 |
+
pytesseract>=0.3.10
|
| 39 |
+
|
| 40 |
+
# Scientific APIs
|
| 41 |
+
arxiv>=1.4.8
|
| 42 |
+
ads>=0.12.3
|
| 43 |
+
astroquery>=0.4.6
|
| 44 |
+
crossref-commons>=0.0.7
|
| 45 |
+
doi2bib>=0.4.0
|
| 46 |
+
scholarly>=1.7.11
|
| 47 |
+
feedparser>=6.0.10
|
| 48 |
+
|
| 49 |
+
# Utilities
|
| 50 |
+
chardet>=5.2.0
|
| 51 |
+
latex2mathml>=3.76.0
|
| 52 |
+
nbformat>=5.9.2
|
| 53 |
+
nbconvert>=7.11.0
|
| 54 |
+
retry>=0.9.2
|
| 55 |
+
aiohttp>=3.9.1
|
| 56 |
+
asyncio>=3.4.3
|
| 57 |
+
tenacity>=8.2.3
|
| 58 |
+
|
| 59 |
+
# Core Machine Learning Dependencies
|
| 60 |
+
torch==2.1.2
|
| 61 |
+
torchvision==0.16.2
|
| 62 |
+
transformers==4.36.2
|
| 63 |
+
scibert==0.5.0
|
| 64 |
+
|
| 65 |
+
# Natural Language Processing
|
| 66 |
+
nltk==3.8.1
|
| 67 |
+
spacy==3.7.3
|
| 68 |
+
gensim==4.3.2
|
| 69 |
+
|
| 70 |
+
# Deep Learning and Embedding
|
| 71 |
+
sentence-transformers==2.3.1
|
| 72 |
+
allennlp==2.10.0
|
| 73 |
+
allennlp-models==2.10.0
|
| 74 |
+
|
| 75 |
+
# Knowledge Graph and Reasoning
|
| 76 |
+
networkx==3.2.1
|
| 77 |
+
rdflib==7.0.0
|
| 78 |
+
|
| 79 |
+
# Knowledge Integration Dependencies
|
| 80 |
+
networkx==3.2.1
|
| 81 |
+
pandas==2.1.4
|
| 82 |
+
transformers==4.36.2
|
| 83 |
+
deepset-transformers==0.4.0
|
| 84 |
+
|
| 85 |
+
# Performance and Optimization
|
| 86 |
+
numba==0.58.1
|
| 87 |
+
cupy==12.2.0 # GPU acceleration
|
| 88 |
+
faiss-cpu==1.7.4
|
| 89 |
+
|
| 90 |
+
# Performance Metrics and Evaluation
|
| 91 |
+
scikit-learn==1.3.2
|
| 92 |
+
numpy==1.24.3
|
| 93 |
+
|
| 94 |
+
# Logging and Monitoring
|
| 95 |
+
structlog==24.1.0
|
| 96 |
+
python-json-logger==2.0.7
|
| 97 |
+
|
| 98 |
+
# Testing and Validation
|
| 99 |
+
pytest==7.4.4
|
| 100 |
+
pytest-asyncio==0.23.2
|
| 101 |
+
pytest-cov==4.1.0
|
| 102 |
+
|
| 103 |
+
# Configuration Management
|
| 104 |
+
pyyaml==6.0.1
|
| 105 |
+
hydra-core==1.3.2
|
| 106 |
+
|
| 107 |
+
# Development and Debugging
|
| 108 |
+
ipython==8.18.1
|
| 109 |
+
jupyter==1.0.0
|
| 110 |
+
|
| 111 |
+
# Optional: Visualization
|
| 112 |
+
matplotlib==3.7.2
|
| 113 |
+
seaborn==0.12.2
|
| 114 |
+
|
| 115 |
+
# Optional: Advanced NLP
|
| 116 |
+
spacy-transformers==1.2.5
|
| 117 |
+
stanza==1.5.0
|
| 118 |
+
|
| 119 |
+
# Optional: Quantum-Inspired Computing
|
| 120 |
+
pennylane==0.33.0
|
| 121 |
+
qiskit==0.43.0
|
| 122 |
+
|
| 123 |
+
# Experimental: AI Reasoning
|
| 124 |
+
sympy==1.12
|
| 125 |
+
z3-solver==4.12.2
|
| 126 |
+
|
| 127 |
+
# Experimental: Explainable AI
|
| 128 |
+
shap==0.43.0
|
| 129 |
+
lime==0.2.0.1
|
| 130 |
+
|
| 131 |
+
# Optional: GPU Support
|
| 132 |
+
--extra-index-url https://download.pytorch.org/whl/cu118
|
| 133 |
+
torch==2.1.2+cu118 # Optional CUDA version
|
| 134 |
+
|
| 135 |
+
# Meta-Learning and Few-Shot Learning
|
| 136 |
+
higher==0.2.0
|
| 137 |
+
learn2learn==0.2.1
|
| 138 |
+
higher-order-layers==0.1.3
|
| 139 |
+
|
| 140 |
+
# Advanced Fine-Tuning and Optimization
|
| 141 |
+
torch-optimizer==0.3.0
|
| 142 |
+
pytorch-lightning==2.1.2
|
| 143 |
+
|
| 144 |
+
# Natural Language Interface Dependencies
|
| 145 |
+
spacy==3.7.2
|
| 146 |
+
langdetect==1.0.9
|
| 147 |
+
dash==2.14.2
|
| 148 |
+
plotly==5.18.0
|
| 149 |
+
dash-core-components==2.0.0
|
| 150 |
+
dash-html-components==2.0.0
|
| 151 |
+
|
| 152 |
+
# Multilingual NLP Models
|
| 153 |
+
https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-3.7.0/en_core_web_sm-3.7.0-py3-none-any.whl
|
| 154 |
+
https://github.com/explosion/spacy-models/releases/download/es_core_news_sm-3.7.0/es_core_news_sm-3.7.0-py3-none-any.whl
|
| 155 |
+
https://github.com/explosion/spacy-models/releases/download/fr_core_news_sm-3.7.0/fr_core_news_sm-3.7.0-py3-none-any.whl
|
| 156 |
+
|
| 157 |
+
# Advanced Semantic Understanding
|
| 158 |
+
transformers==4.36.2
|
| 159 |
+
torch-nlp==0.2.0
|
| 160 |
+
sentence-transformers==2.3.1
|
| 161 |
+
bart-large-mnli==0.1.0
|
| 162 |
+
|
| 163 |
+
# Personalized Interaction
|
| 164 |
+
scikit-learn==1.3.2
|
| 165 |
+
scipy==1.11.4
|
| 166 |
+
|
| 167 |
+
# Distributed Knowledge Graph Dependencies
|
| 168 |
+
ray[default]==2.9.0
|
| 169 |
+
dask==2024.1.0
|
| 170 |
+
distributed==2024.1.0
|
| 171 |
+
networkx==3.2.1
|
| 172 |
+
|
| 173 |
+
# Quantum-Inspired Computation
|
| 174 |
+
numpy==1.26.2
|
| 175 |
+
scipy==1.11.4
|
| 176 |
+
scikit-learn==1.3.2
|
| 177 |
+
|
| 178 |
+
# Advanced Reasoning Dependencies
|
| 179 |
+
scipy==1.11.4
|
| 180 |
+
networkx==3.2.1
|
| 181 |
+
|
| 182 |
+
# Probabilistic Reasoning
|
| 183 |
+
pomegranate==0.14.7
|
| 184 |
+
pgmpy==0.1.23
|
| 185 |
+
|
| 186 |
+
# Hypothesis Generation
|
| 187 |
+
numpy==1.26.2
|
| 188 |
+
scikit-learn==1.3.2
|
| 189 |
+
|
| 190 |
+
# Meta-Cognitive Reasoning Dependencies
|
| 191 |
+
numpy==1.26.2
|
| 192 |
+
scipy==1.11.4
|
| 193 |
+
|
| 194 |
+
# Cognitive Modeling
|
| 195 |
+
pymc3==3.11.4
|
| 196 |
+
arviz==0.17.1
|
| 197 |
+
|
| 198 |
+
# Advanced Probabilistic Reasoning
|
| 199 |
+
probables==0.5.6
|
| 200 |
+
pyro-ppl==1.8.4
|
| 201 |
+
|
| 202 |
+
# Visualization Dependencies
|
| 203 |
+
matplotlib==3.8.2
|
| 204 |
+
networkx==3.2.1
|
| 205 |
+
|
| 206 |
+
# Explainable AI
|
| 207 |
+
shap==0.43.0
|
| 208 |
+
lime==0.2.0.1
|
| 209 |
+
|
| 210 |
+
# Advanced Visualization
|
| 211 |
+
plotly==5.18.0
|
| 212 |
+
seaborn==0.13.1
|
| 213 |
+
|
| 214 |
+
# Semantic Understanding
|
| 215 |
+
transformers==4.36.2
|
| 216 |
+
sentence-transformers==2.3.1
|
| 217 |
+
|
| 218 |
+
# Advanced Language Models
|
| 219 |
+
flair==0.12.2
|
| 220 |
+
stanza==1.6.0
|
| 221 |
+
|
| 222 |
+
# Multilingual Support
|
| 223 |
+
polyglot==16.7.4
|
| 224 |
+
langdetect==1.0.9
|
| 225 |
+
|
| 226 |
+
# Research Generation Dependencies
|
| 227 |
+
scikit-learn==1.3.2
|
| 228 |
+
scipy==1.11.4
|
| 229 |
+
|
| 230 |
+
# Research Analytics
|
| 231 |
+
bibliopixel==3.1.0
|
| 232 |
+
scholarly==0.7.2
|
| 233 |
+
|
| 234 |
+
# Bibliometric Analysis
|
| 235 |
+
pybtex==0.24.0
|
| 236 |
+
habanero==0.8.0
|
| 237 |
+
|
| 238 |
+
# Research Trend Analysis
|
| 239 |
+
altmetric==1.0.3
|
| 240 |
+
crossref-commons==0.4.7
|