File size: 4,726 Bytes
a76f68a | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 | """Assemble the reproduction bundle and register it as a Trackio artifact."""
from __future__ import annotations
import argparse
import json
import os
import shutil
EXCLUDE_DIRS = {"__pycache__", ".venv", ".cache", ".git", "node_modules"}
EXCLUDE_FILES = {".env", "ICML_token.txt"}
def copy_tree(src, dst):
os.makedirs(dst, exist_ok=True)
n = 0
for root, dirs, files in os.walk(src):
dirs[:] = [d for d in dirs if d not in EXCLUDE_DIRS]
rel = os.path.relpath(root, src)
target = os.path.join(dst, rel) if rel != "." else dst
os.makedirs(target, exist_ok=True)
for f in files:
if f in EXCLUDE_FILES or f.endswith((".pyc", ".pt")):
continue
shutil.copy2(os.path.join(root, f), os.path.join(target, f))
n += 1
return n
def prune_dashboard_page(root, project):
import shutil as sh
pages = os.path.join(root, ".trackio", "logbook", "pages")
page_dir = os.path.join(pages, project)
if os.path.isdir(page_dir):
sh.rmtree(page_dir)
print(f"removed stray sidebar page '{project}'")
# trackio.init() also drops an empty dashboard cell on whichever page was
# last active; the bundle run logs no metrics, so it renders as noise.
for page in ("executive-summary", "conclusion"):
page_md = os.path.join(pages, page, "page.md")
if os.path.isfile(page_md):
import re as _re
with open(page_md, encoding="utf-8") as f:
text = f.read()
chunks = _re.split(r"(?=\n---\n<!-- trackio-cell)", text)
kept_chunks = [c for c in chunks if '"type": "dashboard"' not in c]
if len(kept_chunks) != len(chunks):
with open(page_md, "w", encoding="utf-8") as f:
f.write("".join(kept_chunks).rstrip() + "\n")
print(f"removed stray dashboard cell from '{page}'")
index = os.path.join(pages, "index.md")
if os.path.isfile(index):
with open(index, encoding="utf-8") as f:
lines = f.readlines()
kept = [l for l in lines if f"(#/{project})" not in l]
if len(kept) != len(lines):
with open(index, "w", encoding="utf-8") as f:
f.writelines(kept)
print("removed its row from the index Pages table")
if __name__ == "__main__":
ap = argparse.ArgumentParser()
ap.add_argument("--root", default=os.path.expanduser("~/repro_spectral_flow_matching"))
ap.add_argument("--bundle", default=None)
ap.add_argument("--project", default="repro-spectral-flow-matching-stabilizing-stochastic-gflownets-via-frequency-domain-regularizatio")
args = ap.parse_args()
bundle = args.bundle or os.path.join(args.root, "repro_bundle")
if os.path.exists(bundle):
shutil.rmtree(bundle)
total = 0
for sub in ["src", "outputs", "figures", "poster"]:
s = os.path.join(args.root, sub)
if os.path.isdir(s):
total += copy_tree(s, os.path.join(bundle, sub))
for f in ["paper.md", "README_code.md"]:
p = os.path.join(args.root, f)
if os.path.exists(p):
shutil.copy2(p, os.path.join(bundle, f))
total += 1
manifest = {
"paper": "Spectral Flow Matching: Stabilizing Stochastic GFlowNets via Frequency-Domain Regularization",
"openreview_id": "QQRCqb2PDj",
"contents": {
"src/": "reimplementation: envs, ST-GFN + 10 baselines, analysis, diagnostics",
"outputs/": "raw per-run JSON (metrics + training curves), summary tables, diagnostics",
"figures/": "Plotly HTML figures with their raw CSV data",
"poster/": "posterly poster source, rendered PNG/PDF, poster_embed.html",
"paper.md": "OCR transcript of the paper used for the reimplementation",
},
"n_files": total,
}
with open(os.path.join(bundle, "MANIFEST.json"), "w") as f:
json.dump(manifest, f, indent=2)
print(f"bundle at {bundle} with {total} files")
try:
import trackio
trackio.init(project=args.project, name="repro-bundle", resume="allow")
trackio.log_artifact(bundle, name="repro-bundle", type="dataset")
trackio.finish()
print("registered trackio artifact 'repro-bundle'")
except Exception as exc:
print(f"trackio artifact registration skipped/failed: {type(exc).__name__}: {exc}")
# trackio.init() adds a dashboard page for the project to the logbook sidebar.
# The ICML profile requires exactly Executive summary / Claim N / Conclusion,
# so drop that page and its Pages-table row again.
prune_dashboard_page(args.root, args.project)
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