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ddefb60 | 1 | {"application": "software-mentions", "version": "0.9.0-SNAPSHOT", "revision": "54efbc6", "date": "2026-10-14T14:47+0000", "md5": "7509E1586443B9132834238ADE37B697", "biblio": {"doi": "10.1038/s41540-026-00743-x", "title": "Cell trajectory inference based on schr\u00f6dinger problem and a mechanistic model of stochastic gene expression", "authors": "Cl\u00e9mence Fourni\u00e9, Elias Ventre, Ulysse Herbach, Aymeric Baradat, Olivier Gandrillon, Fabien Crauste"}, "mentions": [{"type": "software", "software-type": "implicit", "software-name": {"rawForm": "codes", "normalizedForm": "codes", "offsetStart": 11, "offsetEnd": 16}, "language": {"rawForm": "python", "normalizedForm": "python", "offsetStart": 4, "offsetEnd": 10}, "context": "All python codes are available at https://github.com/fourniecl/inference_trajectories_PDMP.", "mentionContextAttributes": {"used": {"value": false, "score": 0.000265657901763916}, "created": {"value": false, "score": 9.894371032714844e-06}, 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