Datasets:

HawkFranklin-Research
/

TCGA

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+acc_tcga_pan_can_atlas_2018/data_log2_cna.txt filter=lfs diff=lfs merge=lfs -text
+acc_tcga_pan_can_atlas_2018/data_methylation_hm27_hm450_merged.txt filter=lfs diff=lfs merge=lfs -text
+acc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt filter=lfs diff=lfs merge=lfs -text
+acc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt filter=lfs diff=lfs merge=lfs -text
+acc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem.txt filter=lfs diff=lfs merge=lfs -text
+acc_tcga_pan_can_atlas_2018/data_mutations.txt filter=lfs diff=lfs merge=lfs -text
+blca_tcga_pan_can_atlas_2018/data_cna.txt filter=lfs diff=lfs merge=lfs -text
+blca_tcga_pan_can_atlas_2018/data_log2_cna.txt filter=lfs diff=lfs merge=lfs -text
+blca_tcga_pan_can_atlas_2018/data_methylation_hm27_hm450_merged.txt filter=lfs diff=lfs merge=lfs -text
+blca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt filter=lfs diff=lfs merge=lfs -text
+blca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt filter=lfs diff=lfs merge=lfs -text
+blca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_normal_samples.txt filter=lfs diff=lfs merge=lfs -text
+blca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem.txt filter=lfs diff=lfs merge=lfs -text
+blca_tcga_pan_can_atlas_2018/data_mutations.txt filter=lfs diff=lfs merge=lfs -text
+brca_tcga_pan_can_atlas_2018/data_cna.txt filter=lfs diff=lfs merge=lfs -text
+brca_tcga_pan_can_atlas_2018/data_log2_cna.txt filter=lfs diff=lfs merge=lfs -text
+brca_tcga_pan_can_atlas_2018/data_methylation_hm27_hm450_merged.txt filter=lfs diff=lfs merge=lfs -text
+brca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt filter=lfs diff=lfs merge=lfs -text
+brca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt filter=lfs diff=lfs merge=lfs -text
+brca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_normal_samples.txt filter=lfs diff=lfs merge=lfs -text
+brca_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem.txt filter=lfs diff=lfs merge=lfs -text
+brca_tcga_pan_can_atlas_2018/data_mutations.txt filter=lfs diff=lfs merge=lfs -text
+brca_tcga_pan_can_atlas_2018/data_phosphoprotein_quantification.txt filter=lfs diff=lfs merge=lfs -text
+brca_tcga_pan_can_atlas_2018/normals/data_mrna_seq_v2_rsem_normal_samples_zscores_ref_normal_samples.txt filter=lfs diff=lfs merge=lfs -text
+brca_tcga_pan_can_atlas_2018/normals/data_mrna_seq_v2_rsem_normal_samples.txt filter=lfs diff=lfs merge=lfs -text
+cesc_tcga_pan_can_atlas_2018/data_cna.txt filter=lfs diff=lfs merge=lfs -text
+cesc_tcga_pan_can_atlas_2018/data_log2_cna.txt filter=lfs diff=lfs merge=lfs -text
+cesc_tcga_pan_can_atlas_2018/data_methylation_hm27_hm450_merged.txt filter=lfs diff=lfs merge=lfs -text
+cesc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt filter=lfs diff=lfs merge=lfs -text
+cesc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt filter=lfs diff=lfs merge=lfs -text
+cesc_tcga_pan_can_atlas_2018/data_mrna_seq_v2_rsem.txt filter=lfs diff=lfs merge=lfs -text
+cesc_tcga_pan_can_atlas_2018/data_mutations.txt filter=lfs diff=lfs merge=lfs -text
+chol_tcga_pan_can_atlas_2018/data_methylation_hm27_hm450_merged.txt filter=lfs diff=lfs merge=lfs -text

acc_tcga_pan_can_atlas_2018/LICENSE ADDED Viewed

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+ TCGA data are available under Broad Institute GDAC TCGA Analysis Pipeline License. The Cancer Genome Atlas Consortium is pleased to provide the research community with preliminary data prior to publication. Users are requested to carefully consider that these data are preliminary and have yet to be validated. Researchers are warned that the preliminary data have a significant uncertainty, are likely to change, and should be used with caution.

acc_tcga_pan_can_atlas_2018/README.md ADDED Viewed

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+## Improving PanCancer Atlas Data: (transformation steps for the new data types being added)
+### The Timeline/Treatment data:
+**Data Source**
+- GDAC Firehose: https://gdac.broadinstitute.org/
+- File Used: `Merge_Clinical.Level_1.20160128` (clin.merged.txt) for each cancer type.
+**Data Transformation**
+- The detailed transformation steps are listed in the Pull Request [here](https://github.com/cBioPortal/datahub/pull/1597)
+### The Genetic Ancestry data:
+**Data Source**
+- GDAC Firehose: https://gdc.cancer.gov/about-data/publications/CCG-AIM-2020
+- File Used: `Admixture_by_sample.txt` (Admix percent by sample) for each cancer type.
+### The Methylation data:
+**Data Source**
+- GDAC Firehose: https://gdc.cancer.gov/node/977
+- File Used: `jhu-usc.edu_PANCAN_HumanMethylation450.betaValue_whitelisted.tsv` (DNA methylation 450K only beta value data matrix) for each cancer type.
+**Data Transformation**
+ - The detailed transformation steps are listed in the Pull Request [here](https://github.com/cBioPortal/datahub/pull/1597)
+ - The meta info for the Infinium Illumina 450k probes used for this profile is under the folder "probe_meta" "probe_450k_mapinfo_PQ.txt" is the original download from Illumina.
+### Tumor Break Load (TBL):
+**Data Source**
+ - TBL scores based on Lakbir et al., 2024 (Manuscript in progress)
+ - Overview of TBL calculation for TCGA, from [Lakbir et al., Eur J Cancer 2024](https://pubmed.ncbi.nlm.nih.gov/36334560/)
+ - Data is provided as a sample-level clinical attribute labeled `Tumor Break Load`

acc_tcga_pan_can_atlas_2018/case_lists/cases_RNA_Seq_v2_mRNA.txt ADDED Viewed

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+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+stable_id: acc_tcga_pan_can_atlas_2018_rna_seq_v2_mrna
+case_list_name: Samples with mRNA data (RNA Seq V2)
+case_list_description: Samples with mRNA expression data (78 samples)
+case_list_category: all_cases_with_mrna_rnaseq_data
+case_list_ids: TCGA-OR-A5JY-01	TCGA-OR-A5JV-01	TCGA-OR-A5JC-01	TCGA-OR-A5J5-01	TCGA-OR-A5JB-01	TCGA-OR-A5JL-01	TCGA-OR-A5JA-01	TCGA-OR-A5LL-01	TCGA-OR-A5L9-01	TCGA-OR-A5L5-01	TCGA-OR-A5JJ-01	TCGA-OR-A5JI-01	TCGA-OR-A5JF-01	TCGA-OR-A5K0-01	TCGA-OR-A5J2-01	TCGA-OR-A5J1-01	TCGA-OR-A5JT-01	TCGA-OR-A5KY-01	TCGA-OR-A5JW-01	TCGA-OR-A5LP-01	TCGA-OR-A5K5-01	TCGA-OR-A5JP-01	TCGA-OR-A5LG-01	TCGA-OR-A5LM-01	TCGA-OR-A5JK-01	TCGA-OR-A5J8-01	TCGA-OR-A5LO-01	TCGA-PK-A5H9-01	TCGA-OR-A5JG-01	TCGA-OR-A5KW-01	TCGA-OR-A5LS-01	TCGA-OR-A5JS-01	TCGA-OR-A5JE-01	TCGA-OR-A5JR-01	TCGA-OR-A5JZ-01	TCGA-OR-A5JQ-01	TCGA-OR-A5K8-01	TCGA-PK-A5HB-01	TCGA-OR-A5JM-01	TCGA-PK-A5HA-01	TCGA-OR-A5K4-01	TCGA-PK-A5H8-01	TCGA-OR-A5KZ-01	TCGA-OR-A5KU-01	TCGA-OR-A5K3-01	TCGA-OR-A5K6-01	TCGA-OR-A5KO-01	TCGA-OR-A5JX-01	TCGA-OR-A5L8-01	TCGA-OU-A5PI-01	TCGA-OR-A5LJ-01	TCGA-OR-A5LB-01	TCGA-OR-A5K1-01	TCGA-OR-A5LK-01	TCGA-OR-A5K2-01	TCGA-OR-A5KX-01	TCGA-OR-A5LH-01	TCGA-OR-A5KT-01	TCGA-OR-A5L6-01	TCGA-OR-A5J9-01	TCGA-OR-A5J6-01	TCGA-PA-A5YG-01	TCGA-OR-A5KV-01	TCGA-OR-A5LE-01	TCGA-OR-A5LC-01	TCGA-OR-A5L3-01	TCGA-OR-A5LT-01	TCGA-P6-A5OF-01	TCGA-OR-A5J3-01	TCGA-OR-A5L4-01	TCGA-OR-A5LA-01	TCGA-OR-A5LR-01	TCGA-OR-A5JO-01	TCGA-OR-A5LN-01	TCGA-OR-A5LD-01	TCGA-OR-A5K9-01	TCGA-OR-A5J7-01	TCGA-OR-A5JD-01

acc_tcga_pan_can_atlas_2018/case_lists/cases_all.txt ADDED Viewed

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+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+stable_id: acc_tcga_pan_can_atlas_2018_all
+case_list_name: All samples
+case_list_description: All samples (92 samples)
+case_list_category: all_cases_in_study
+case_list_ids: TCGA-OR-A5LK-01	TCGA-OR-A5JV-01	TCGA-OR-A5JC-01	TCGA-OR-A5JB-01	TCGA-OR-A5JA-01	TCGA-OR-A5LL-01	TCGA-OR-A5OG-01	TCGA-OR-A5L5-01	TCGA-OR-A5LT-01	TCGA-OR-A5JW-01	TCGA-OR-A5K5-01	TCGA-OR-A5JP-01	TCGA-OR-A5LG-01	TCGA-OR-A5JK-01	TCGA-OR-A5J8-01	TCGA-OR-A5LO-01	TCGA-OR-A5KW-01	TCGA-OR-A5KP-01	TCGA-OR-A5JE-01	TCGA-PK-A5H8-01	TCGA-OR-A5LC-01	TCGA-PK-A5HB-01	TCGA-PK-A5HA-01	TCGA-OR-A5KU-01	TCGA-OR-A5K6-01	TCGA-OR-A5KB-01	TCGA-OR-A5LJ-01	TCGA-OR-A5L8-01	TCGA-OU-A5PI-01	TCGA-OR-A5K1-01	TCGA-OR-A5K2-01	TCGA-OR-A5KX-01	TCGA-OR-A5JZ-01	TCGA-OR-A5KT-01	TCGA-OR-A5J6-01	TCGA-OR-A5L1-01	TCGA-OR-A5KS-01	TCGA-OR-A5JJ-01	TCGA-OR-A5LF-01	TCGA-OR-A5L4-01	TCGA-PK-A5H9-01	TCGA-OR-A5LR-01	TCGA-OR-A5LN-01	TCGA-OR-A5K9-01	TCGA-OR-A5JD-01	TCGA-OR-A5JY-01	TCGA-OR-A5LD-01	TCGA-OR-A5J5-01	TCGA-OR-A5LP-01	TCGA-OR-A5JL-01	TCGA-OR-A5LS-01	TCGA-OR-A5L9-01	TCGA-P6-A5OF-01	TCGA-OR-A5JI-01	TCGA-OR-A5JF-01	TCGA-OR-A5K0-01	TCGA-OR-A5J2-01	TCGA-OR-A5J1-01	TCGA-OR-A5LI-01	TCGA-OR-A5KY-01	TCGA-OR-A5LE-01	TCGA-OR-A5LB-01	TCGA-OR-A5JU-01	TCGA-OR-A5LM-01	TCGA-OR-A5LA-01	TCGA-OR-A5JG-01	TCGA-OR-A5JR-01	TCGA-OR-A5JQ-01	TCGA-OR-A5K8-01	TCGA-OR-A5JM-01	TCGA-OR-A5K4-01	TCGA-OR-A5KZ-01	TCGA-OR-A5K3-01	TCGA-OR-A5KO-01	TCGA-OR-A5JX-01	TCGA-OR-A5J4-01	TCGA-OR-A5J3-01	TCGA-OR-A5L2-01	TCGA-OR-A5JH-01	TCGA-OR-A5LH-01	TCGA-OR-A5L6-01	TCGA-OR-A5J9-01	TCGA-PA-A5YG-01	TCGA-OR-A5KV-01	TCGA-OR-A5L3-01	TCGA-OR-A5JT-01	TCGA-PK-A5HC-01	TCGA-OR-A5JS-01	TCGA-OR-A5KQ-01	TCGA-OR-A5JO-01	TCGA-P6-A5OH-01	TCGA-OR-A5J7-01

acc_tcga_pan_can_atlas_2018/case_lists/cases_cna.txt ADDED Viewed

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+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+stable_id: acc_tcga_pan_can_atlas_2018_cna
+case_list_name: Samples with CNA data
+case_list_description: Samples with CNA data (89 samples)
+case_list_category: all_cases_with_cna_data
+case_list_ids: TCGA-OR-A5LK-01	TCGA-OR-A5JC-01	TCGA-OR-A5JB-01	TCGA-OR-A5JA-01	TCGA-OR-A5LL-01	TCGA-OR-A5L5-01	TCGA-OR-A5LT-01	TCGA-OR-A5JP-01	TCGA-OR-A5LG-01	TCGA-OR-A5J8-01	TCGA-OR-A5LO-01	TCGA-OR-A5JE-01	TCGA-OR-A5LC-01	TCGA-OR-A5KU-01	TCGA-OR-A5LJ-01	TCGA-OR-A5L8-01	TCGA-OR-A5KT-01	TCGA-OR-A5J6-01	TCGA-OR-A5L1-01	TCGA-OR-A5JJ-01	TCGA-OR-A5LF-01	TCGA-OR-A5L4-01	TCGA-PK-A5H9-01	TCGA-OR-A5LN-01	TCGA-OR-A5K9-01	TCGA-OR-A5JD-01	TCGA-OR-A5J5-01	TCGA-OR-A5LP-01	TCGA-OR-A5JL-01	TCGA-OR-A5LS-01	TCGA-OR-A5L9-01	TCGA-OR-A5JI-01	TCGA-OR-A5J2-01	TCGA-OR-A5J1-01	TCGA-OR-A5LI-01	TCGA-OR-A5KY-01	TCGA-OR-A5LB-01	TCGA-OR-A5LM-01	TCGA-OR-A5LA-01	TCGA-OR-A5K8-01	TCGA-OR-A5JM-01	TCGA-OR-A5KZ-01	TCGA-OR-A5J4-01	TCGA-OR-A5J3-01	TCGA-OR-A5L2-01	TCGA-OR-A5JH-01	TCGA-OR-A5L6-01	TCGA-PA-A5YG-01	TCGA-OR-A5KV-01	TCGA-PK-A5HC-01	TCGA-OR-A5KQ-01	TCGA-OR-A5JO-01	TCGA-P6-A5OH-01	TCGA-OR-A5J7-01	TCGA-OR-A5JV-01	TCGA-OR-A5JW-01	TCGA-OR-A5K5-01	TCGA-OR-A5JK-01	TCGA-OR-A5KW-01	TCGA-OR-A5KP-01	TCGA-PK-A5HB-01	TCGA-PK-A5HA-01	TCGA-OR-A5K6-01	TCGA-OR-A5KB-01	TCGA-OU-A5PI-01	TCGA-OR-A5K1-01	TCGA-OR-A5K2-01	TCGA-OR-A5KX-01	TCGA-OR-A5JZ-01	TCGA-OR-A5KS-01	TCGA-OR-A5LR-01	TCGA-OR-A5JY-01	TCGA-OR-A5LD-01	TCGA-OR-A5JF-01	TCGA-OR-A5K0-01	TCGA-OR-A5LE-01	TCGA-OR-A5JU-01	TCGA-OR-A5JG-01	TCGA-OR-A5JR-01	TCGA-OR-A5JQ-01	TCGA-OR-A5K4-01	TCGA-OR-A5K3-01	TCGA-OR-A5KO-01	TCGA-OR-A5JX-01	TCGA-OR-A5LH-01	TCGA-OR-A5J9-01	TCGA-OR-A5L3-01	TCGA-OR-A5JT-01	TCGA-OR-A5JS-01

acc_tcga_pan_can_atlas_2018/case_lists/cases_cnaseq.txt ADDED Viewed

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+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+stable_id: acc_tcga_pan_can_atlas_2018_cnaseq
+case_list_name: Samples with mutation and CNA data
+case_list_description: Samples with mutation and CNA data (89 samples)
+case_list_category: all_cases_with_mutation_and_cna_data
+case_list_ids: TCGA-OR-A5LK-01	TCGA-OR-A5JC-01	TCGA-OR-A5JB-01	TCGA-OR-A5JA-01	TCGA-OR-A5LL-01	TCGA-OR-A5L5-01	TCGA-OR-A5LT-01	TCGA-OR-A5JP-01	TCGA-OR-A5LG-01	TCGA-OR-A5J8-01	TCGA-OR-A5LO-01	TCGA-OR-A5JE-01	TCGA-OR-A5LC-01	TCGA-OR-A5KU-01	TCGA-OR-A5LJ-01	TCGA-OR-A5L8-01	TCGA-OR-A5KT-01	TCGA-OR-A5J6-01	TCGA-OR-A5L1-01	TCGA-OR-A5JJ-01	TCGA-OR-A5LF-01	TCGA-OR-A5L4-01	TCGA-PK-A5H9-01	TCGA-OR-A5LN-01	TCGA-OR-A5K9-01	TCGA-OR-A5JD-01	TCGA-OR-A5J5-01	TCGA-OR-A5LP-01	TCGA-OR-A5JL-01	TCGA-OR-A5LS-01	TCGA-OR-A5L9-01	TCGA-OR-A5JI-01	TCGA-OR-A5J2-01	TCGA-OR-A5J1-01	TCGA-OR-A5LI-01	TCGA-OR-A5KY-01	TCGA-OR-A5LB-01	TCGA-OR-A5LM-01	TCGA-OR-A5LA-01	TCGA-OR-A5K8-01	TCGA-OR-A5JM-01	TCGA-OR-A5KZ-01	TCGA-OR-A5J4-01	TCGA-OR-A5J3-01	TCGA-OR-A5L2-01	TCGA-OR-A5JH-01	TCGA-OR-A5L6-01	TCGA-PA-A5YG-01	TCGA-OR-A5KV-01	TCGA-PK-A5HC-01	TCGA-OR-A5KQ-01	TCGA-OR-A5JO-01	TCGA-P6-A5OH-01	TCGA-OR-A5J7-01	TCGA-OR-A5JV-01	TCGA-OR-A5JW-01	TCGA-OR-A5K5-01	TCGA-OR-A5JK-01	TCGA-OR-A5KW-01	TCGA-OR-A5KP-01	TCGA-PK-A5HB-01	TCGA-PK-A5HA-01	TCGA-OR-A5K6-01	TCGA-OR-A5KB-01	TCGA-OU-A5PI-01	TCGA-OR-A5K1-01	TCGA-OR-A5K2-01	TCGA-OR-A5KX-01	TCGA-OR-A5JZ-01	TCGA-OR-A5KS-01	TCGA-OR-A5LR-01	TCGA-OR-A5JY-01	TCGA-OR-A5LD-01	TCGA-OR-A5JF-01	TCGA-OR-A5K0-01	TCGA-OR-A5LE-01	TCGA-OR-A5JU-01	TCGA-OR-A5JG-01	TCGA-OR-A5JR-01	TCGA-OR-A5JQ-01	TCGA-OR-A5K4-01	TCGA-OR-A5K3-01	TCGA-OR-A5KO-01	TCGA-OR-A5JX-01	TCGA-OR-A5LH-01	TCGA-OR-A5J9-01	TCGA-OR-A5L3-01	TCGA-OR-A5JT-01	TCGA-OR-A5JS-01

acc_tcga_pan_can_atlas_2018/case_lists/cases_complete.txt ADDED Viewed

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+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+stable_id: acc_tcga_pan_can_atlas_2018_3way_complete
+case_list_name: Complete samples
+case_list_description: Samples with mutation, CNA and expression data (76 samples)
+case_list_category: all_cases_with_mutation_and_cna_and_mrna_data
+case_list_ids: TCGA-OR-A5LK-01	TCGA-OR-A5JV-01	TCGA-OR-A5JC-01	TCGA-OR-A5JQ-01	TCGA-OR-A5J5-01	TCGA-OR-A5JB-01	TCGA-OR-A5JL-01	TCGA-OR-A5JA-01	TCGA-OR-A5LL-01	TCGA-OR-A5L9-01	TCGA-OR-A5JX-01	TCGA-OR-A5L5-01	TCGA-OR-A5JI-01	TCGA-OR-A5LT-01	TCGA-OR-A5K0-01	TCGA-OR-A5J2-01	TCGA-OR-A5JY-01	TCGA-OR-A5J1-01	TCGA-OR-A5LH-01	TCGA-OR-A5KY-01	TCGA-OR-A5JW-01	TCGA-OR-A5LP-01	TCGA-OR-A5K5-01	TCGA-OR-A5JP-01	TCGA-OR-A5LG-01	TCGA-OR-A5LM-01	TCGA-OR-A5JK-01	TCGA-OR-A5J8-01	TCGA-OR-A5LO-01	TCGA-PK-A5H9-01	TCGA-OR-A5JG-01	TCGA-OR-A5KW-01	TCGA-OR-A5LS-01	TCGA-OR-A5JS-01	TCGA-OR-A5JE-01	TCGA-OR-A5LE-01	TCGA-OR-A5LC-01	TCGA-OR-A5K8-01	TCGA-PK-A5HB-01	TCGA-OR-A5JM-01	TCGA-PK-A5HA-01	TCGA-OR-A5K4-01	TCGA-OR-A5JR-01	TCGA-OR-A5KZ-01	TCGA-OR-A5KU-01	TCGA-OR-A5K3-01	TCGA-OR-A5K6-01	TCGA-OR-A5KO-01	TCGA-OR-A5LJ-01	TCGA-OR-A5L8-01	TCGA-OU-A5PI-01	TCGA-OR-A5J3-01	TCGA-OR-A5LB-01	TCGA-OR-A5K1-01	TCGA-OR-A5K2-01	TCGA-OR-A5KX-01	TCGA-OR-A5JZ-01	TCGA-OR-A5KT-01	TCGA-OR-A5L6-01	TCGA-OR-A5LD-01	TCGA-OR-A5J6-01	TCGA-PA-A5YG-01	TCGA-OR-A5KV-01	TCGA-OR-A5J9-01	TCGA-OR-A5JF-01	TCGA-OR-A5L3-01	TCGA-OR-A5JJ-01	TCGA-OR-A5JT-01	TCGA-OR-A5L4-01	TCGA-OR-A5LA-01	TCGA-OR-A5LR-01	TCGA-OR-A5JO-01	TCGA-OR-A5LN-01	TCGA-OR-A5K9-01	TCGA-OR-A5J7-01	TCGA-OR-A5JD-01

acc_tcga_pan_can_atlas_2018/case_lists/cases_log2CNA.txt ADDED Viewed

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+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+stable_id: acc_tcga_pan_can_atlas_2018_log2CNA
+case_list_name: Samples with log2 copy-number data
+case_list_description: Samples with log2 copy-number data (89 samples)
+case_list_category: all_cases_with_log2_cna_data
+case_list_ids: TCGA-OR-A5LK-01	TCGA-OR-A5JC-01	TCGA-OR-A5JB-01	TCGA-OR-A5JA-01	TCGA-OR-A5LL-01	TCGA-OR-A5L5-01	TCGA-OR-A5LT-01	TCGA-OR-A5JP-01	TCGA-OR-A5LG-01	TCGA-OR-A5J8-01	TCGA-OR-A5LO-01	TCGA-OR-A5JE-01	TCGA-OR-A5LC-01	TCGA-OR-A5KU-01	TCGA-OR-A5LJ-01	TCGA-OR-A5L8-01	TCGA-OR-A5KT-01	TCGA-OR-A5J6-01	TCGA-OR-A5L1-01	TCGA-OR-A5JJ-01	TCGA-OR-A5LF-01	TCGA-OR-A5L4-01	TCGA-PK-A5H9-01	TCGA-OR-A5LN-01	TCGA-OR-A5K9-01	TCGA-OR-A5JD-01	TCGA-OR-A5J5-01	TCGA-OR-A5LP-01	TCGA-OR-A5JL-01	TCGA-OR-A5LS-01	TCGA-OR-A5L9-01	TCGA-OR-A5JI-01	TCGA-OR-A5J2-01	TCGA-OR-A5J1-01	TCGA-OR-A5LI-01	TCGA-OR-A5KY-01	TCGA-OR-A5LB-01	TCGA-OR-A5LM-01	TCGA-OR-A5LA-01	TCGA-OR-A5K8-01	TCGA-OR-A5JM-01	TCGA-OR-A5KZ-01	TCGA-OR-A5J4-01	TCGA-OR-A5J3-01	TCGA-OR-A5L2-01	TCGA-OR-A5JH-01	TCGA-OR-A5L6-01	TCGA-PA-A5YG-01	TCGA-OR-A5KV-01	TCGA-PK-A5HC-01	TCGA-OR-A5KQ-01	TCGA-OR-A5JO-01	TCGA-P6-A5OH-01	TCGA-OR-A5J7-01	TCGA-OR-A5JV-01	TCGA-OR-A5JW-01	TCGA-OR-A5K5-01	TCGA-OR-A5JK-01	TCGA-OR-A5KW-01	TCGA-OR-A5KP-01	TCGA-PK-A5HB-01	TCGA-PK-A5HA-01	TCGA-OR-A5K6-01	TCGA-OR-A5KB-01	TCGA-OU-A5PI-01	TCGA-OR-A5K1-01	TCGA-OR-A5K2-01	TCGA-OR-A5KX-01	TCGA-OR-A5JZ-01	TCGA-OR-A5KS-01	TCGA-OR-A5LR-01	TCGA-OR-A5JY-01	TCGA-OR-A5LD-01	TCGA-OR-A5JF-01	TCGA-OR-A5K0-01	TCGA-OR-A5LE-01	TCGA-OR-A5JU-01	TCGA-OR-A5JG-01	TCGA-OR-A5JR-01	TCGA-OR-A5JQ-01	TCGA-OR-A5K4-01	TCGA-OR-A5K3-01	TCGA-OR-A5KO-01	TCGA-OR-A5JX-01	TCGA-OR-A5LH-01	TCGA-OR-A5J9-01	TCGA-OR-A5L3-01	TCGA-OR-A5JT-01	TCGA-OR-A5JS-01

acc_tcga_pan_can_atlas_2018/case_lists/cases_rppa.txt ADDED Viewed

	@@ -0,0 +1,6 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+stable_id: acc_tcga_pan_can_atlas_2018_rppa
+case_list_name: Samples with protein data (RPPA)
+case_list_description: Samples with protein data (RPPA) (45 samples)
+case_list_category: all_cases_with_rppa_data
+case_list_ids: TCGA-OR-A5JY-01	TCGA-OR-A5JV-01	TCGA-OR-A5LP-01	TCGA-OR-A5LD-01	TCGA-OR-A5JA-01	TCGA-OR-A5LL-01	TCGA-PK-A5HA-01	TCGA-OR-A5LT-01	TCGA-OR-A5K0-01	TCGA-OR-A5J2-01	TCGA-OR-A5LH-01	TCGA-OR-A5KY-01	TCGA-OR-A5JW-01	TCGA-OR-A5K5-01	TCGA-OR-A5JP-01	TCGA-OR-A5LG-01	TCGA-OR-A5LM-01	TCGA-OR-A5J8-01	TCGA-OR-A5LO-01	TCGA-OR-A5JS-01	TCGA-OR-A5KW-01	TCGA-OR-A5LS-01	TCGA-OR-A5JR-01	TCGA-OR-A5K8-01	TCGA-OR-A5K4-01	TCGA-PK-A5H8-01	TCGA-OR-A5KZ-01	TCGA-OR-A5KU-01	TCGA-OR-A5K3-01	TCGA-OR-A5K6-01	TCGA-OR-A5KO-01	TCGA-OR-A5LJ-01	TCGA-OU-A5PI-01	TCGA-OR-A5J3-01	TCGA-OR-A5K1-01	TCGA-OR-A5LK-01	TCGA-OR-A5KX-01	TCGA-OR-A5JZ-01	TCGA-OR-A5J9-01	TCGA-OR-A5J6-01	TCGA-PA-A5YG-01	TCGA-OR-A5JT-01	TCGA-PK-A5H9-01	TCGA-OR-A5LN-01	TCGA-OR-A5J7-01

acc_tcga_pan_can_atlas_2018/case_lists/cases_sequenced.txt ADDED Viewed

	@@ -0,0 +1,6 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+stable_id: acc_tcga_pan_can_atlas_2018_sequenced
+case_list_name: Samples with mutation data
+case_list_description: Samples with mutation data (91 samples)
+case_list_category: all_cases_with_mutation_data
+case_list_ids: TCGA-OR-A5LK-01	TCGA-OR-A5JV-01	TCGA-OR-A5JC-01	TCGA-OR-A5JB-01	TCGA-OR-A5JA-01	TCGA-OR-A5LL-01	TCGA-OR-A5L5-01	TCGA-OR-A5LT-01	TCGA-OR-A5JW-01	TCGA-OR-A5K5-01	TCGA-OR-A5JP-01	TCGA-OR-A5LG-01	TCGA-OR-A5JK-01	TCGA-OR-A5J8-01	TCGA-OR-A5LO-01	TCGA-OR-A5KW-01	TCGA-OR-A5KP-01	TCGA-OR-A5JE-01	TCGA-PK-A5H8-01	TCGA-OR-A5LC-01	TCGA-PK-A5HB-01	TCGA-OR-A5L9-01	TCGA-OR-A5KU-01	TCGA-OR-A5K6-01	TCGA-OR-A5KB-01	TCGA-OR-A5LJ-01	TCGA-OR-A5L8-01	TCGA-OU-A5PI-01	TCGA-OR-A5K1-01	TCGA-OR-A5K2-01	TCGA-OR-A5KX-01	TCGA-OR-A5JZ-01	TCGA-OR-A5KT-01	TCGA-OR-A5J6-01	TCGA-OR-A5L1-01	TCGA-OR-A5KS-01	TCGA-OR-A5JJ-01	TCGA-OR-A5LF-01	TCGA-OR-A5L4-01	TCGA-PK-A5H9-01	TCGA-OR-A5LR-01	TCGA-OR-A5LN-01	TCGA-OR-A5K9-01	TCGA-OR-A5JD-01	TCGA-OR-A5JY-01	TCGA-OR-A5LD-01	TCGA-OR-A5J5-01	TCGA-OR-A5LP-01	TCGA-OR-A5JL-01	TCGA-OR-A5LS-01	TCGA-PK-A5HA-01	TCGA-P6-A5OF-01	TCGA-OR-A5JI-01	TCGA-OR-A5JF-01	TCGA-OR-A5K0-01	TCGA-OR-A5J2-01	TCGA-OR-A5J1-01	TCGA-OR-A5LI-01	TCGA-OR-A5KY-01	TCGA-OR-A5LE-01	TCGA-OR-A5LB-01	TCGA-OR-A5JU-01	TCGA-OR-A5LM-01	TCGA-OR-A5LA-01	TCGA-OR-A5JG-01	TCGA-OR-A5JR-01	TCGA-OR-A5JQ-01	TCGA-OR-A5K8-01	TCGA-OR-A5JM-01	TCGA-OR-A5K4-01	TCGA-OR-A5KZ-01	TCGA-OR-A5K3-01	TCGA-OR-A5KO-01	TCGA-OR-A5JX-01	TCGA-OR-A5J4-01	TCGA-OR-A5J3-01	TCGA-OR-A5L2-01	TCGA-OR-A5JH-01	TCGA-OR-A5LH-01	TCGA-OR-A5L6-01	TCGA-OR-A5J9-01	TCGA-PA-A5YG-01	TCGA-OR-A5KV-01	TCGA-OR-A5L3-01	TCGA-OR-A5JT-01	TCGA-PK-A5HC-01	TCGA-OR-A5JS-01	TCGA-OR-A5KQ-01	TCGA-OR-A5JO-01	TCGA-P6-A5OH-01	TCGA-OR-A5J7-01

acc_tcga_pan_can_atlas_2018/case_lists/cases_sv.txt ADDED Viewed

	@@ -0,0 +1,6 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+stable_id: acc_tcga_pan_can_atlas_2018_sv
+case_list_name: Samples with SV data
+case_list_description: Samples with SV data
+case_list_category: all_cases_with_sv_data
+case_list_ids: TCGA-OR-A5LK-01	TCGA-OR-A5JV-01	TCGA-OR-A5JC-01	TCGA-OR-A5JB-01	TCGA-OR-A5JA-01	TCGA-OR-A5LL-01	TCGA-OR-A5L5-01	TCGA-OR-A5LT-01	TCGA-OR-A5JW-01	TCGA-OR-A5K5-01	TCGA-OR-A5JP-01	TCGA-OR-A5LG-01	TCGA-OR-A5JK-01	TCGA-OR-A5J8-01	TCGA-OR-A5LO-01	TCGA-OR-A5KW-01	TCGA-OR-A5KP-01	TCGA-OR-A5JE-01	TCGA-PK-A5H8-01	TCGA-OR-A5LC-01	TCGA-PK-A5HB-01	TCGA-OR-A5L9-01	TCGA-OR-A5KU-01	TCGA-OR-A5K6-01	TCGA-OR-A5KB-01	TCGA-OR-A5LJ-01	TCGA-OR-A5L8-01	TCGA-OU-A5PI-01	TCGA-OR-A5K1-01	TCGA-OR-A5K2-01	TCGA-OR-A5KX-01	TCGA-OR-A5JZ-01	TCGA-OR-A5KT-01	TCGA-OR-A5J6-01	TCGA-OR-A5L1-01	TCGA-OR-A5KS-01	TCGA-OR-A5JJ-01	TCGA-OR-A5LF-01	TCGA-OR-A5L4-01	TCGA-PK-A5H9-01	TCGA-OR-A5LR-01	TCGA-OR-A5LN-01	TCGA-OR-A5K9-01	TCGA-OR-A5JD-01	TCGA-OR-A5JY-01	TCGA-OR-A5LD-01	TCGA-OR-A5J5-01	TCGA-OR-A5LP-01	TCGA-OR-A5JL-01	TCGA-OR-A5LS-01	TCGA-PK-A5HA-01	TCGA-P6-A5OF-01	TCGA-OR-A5JI-01	TCGA-OR-A5JF-01	TCGA-OR-A5K0-01	TCGA-OR-A5J2-01	TCGA-OR-A5J1-01	TCGA-OR-A5LI-01	TCGA-OR-A5KY-01	TCGA-OR-A5LE-01	TCGA-OR-A5LB-01	TCGA-OR-A5JU-01	TCGA-OR-A5LM-01	TCGA-OR-A5LA-01	TCGA-OR-A5JG-01	TCGA-OR-A5JR-01	TCGA-OR-A5JQ-01	TCGA-OR-A5K8-01	TCGA-OR-A5JM-01	TCGA-OR-A5K4-01	TCGA-OR-A5KZ-01	TCGA-OR-A5K3-01	TCGA-OR-A5KO-01	TCGA-OR-A5JX-01	TCGA-OR-A5J4-01	TCGA-OR-A5J3-01	TCGA-OR-A5L2-01	TCGA-OR-A5JH-01	TCGA-OR-A5LH-01	TCGA-OR-A5L6-01	TCGA-OR-A5J9-01	TCGA-PA-A5YG-01	TCGA-OR-A5KV-01	TCGA-OR-A5L3-01	TCGA-OR-A5JT-01	TCGA-PK-A5HC-01	TCGA-OR-A5JS-01	TCGA-OR-A5KQ-01	TCGA-OR-A5JO-01	TCGA-P6-A5OH-01	TCGA-OR-A5J7-01

acc_tcga_pan_can_atlas_2018/data_armlevel_cna.txt ADDED Viewed

	@@ -0,0 +1,40 @@

+ENTITY_STABLE_ID	NAME	DESCRIPTION	TCGA-OR-A5J1-01	TCGA-OR-A5J2-01	TCGA-OR-A5J3-01	TCGA-OR-A5J4-01	TCGA-OR-A5J5-01	TCGA-OR-A5J6-01	TCGA-OR-A5J7-01	TCGA-OR-A5J8-01	TCGA-OR-A5J9-01	TCGA-OR-A5JA-01	TCGA-OR-A5JB-01	TCGA-OR-A5JC-01	TCGA-OR-A5JD-01	TCGA-OR-A5JE-01	TCGA-OR-A5JF-01	TCGA-OR-A5JG-01	TCGA-OR-A5JH-01	TCGA-OR-A5JI-01	TCGA-OR-A5JJ-01	TCGA-OR-A5JK-01	TCGA-OR-A5JL-01	TCGA-OR-A5JM-01	TCGA-OR-A5JO-01	TCGA-OR-A5JP-01	TCGA-OR-A5JQ-01	TCGA-OR-A5JR-01	TCGA-OR-A5JS-01	TCGA-OR-A5JT-01	TCGA-OR-A5JU-01	TCGA-OR-A5JV-01	TCGA-OR-A5JW-01	TCGA-OR-A5JX-01	TCGA-OR-A5JY-01	TCGA-OR-A5JZ-01	TCGA-OR-A5K0-01	TCGA-OR-A5K1-01	TCGA-OR-A5K2-01	TCGA-OR-A5K3-01	TCGA-OR-A5K4-01	TCGA-OR-A5K5-01	TCGA-OR-A5K6-01	TCGA-OR-A5K8-01	TCGA-OR-A5K9-01	TCGA-OR-A5KB-01	TCGA-OR-A5KO-01	TCGA-OR-A5KP-01	TCGA-OR-A5KQ-01	TCGA-OR-A5KS-01	TCGA-OR-A5KT-01	TCGA-OR-A5KU-01	TCGA-OR-A5KV-01	TCGA-OR-A5KW-01	TCGA-OR-A5KX-01	TCGA-OR-A5KY-01	TCGA-OR-A5KZ-01	TCGA-OR-A5L1-01	TCGA-OR-A5L2-01	TCGA-OR-A5L3-01	TCGA-OR-A5L4-01	TCGA-OR-A5L5-01	TCGA-OR-A5L6-01	TCGA-OR-A5L8-01	TCGA-OR-A5L9-01	TCGA-OR-A5LA-01	TCGA-OR-A5LB-01	TCGA-OR-A5LC-01	TCGA-OR-A5LD-01	TCGA-OR-A5LE-01	TCGA-OR-A5LF-01	TCGA-OR-A5LG-01	TCGA-OR-A5LH-01	TCGA-OR-A5LI-01	TCGA-OR-A5LJ-01	TCGA-OR-A5LK-01	TCGA-OR-A5LL-01	TCGA-OR-A5LM-01	TCGA-OR-A5LN-01	TCGA-OR-A5LO-01	TCGA-OR-A5LP-01	TCGA-OR-A5LR-01	TCGA-OR-A5LS-01	TCGA-OR-A5LT-01	TCGA-OU-A5PI-01	TCGA-P6-A5OF-01	TCGA-OR-A5OG-01	TCGA-P6-A5OH-01	TCGA-PA-A5YG-01	TCGA-PK-A5H8-01	TCGA-PK-A5H9-01	TCGA-PK-A5HA-01	TCGA-PK-A5HB-01	TCGA-PK-A5HC-01
+1p_status	1p	Copy number status of 1p	Unchanged	Unchanged	Unchanged	NA	Loss	Unchanged	Loss	Unchanged	Loss	Loss	Gain	Loss	Loss	NA	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Loss	NA	Loss	Loss	Loss	NA	Unchanged	NA	Unchanged	Unchanged	Unchanged	Unchanged	Loss	NA	Loss	Loss	Gain	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Loss	NA	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Loss	Loss	Loss	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Unchanged	Unchanged	NA	Unchanged	Loss	Unchanged	Unchanged
+1q_status	1q	Copy number status of 1q	Unchanged	Gain	Unchanged	Loss	Loss	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Gain	Unchanged	Loss	Loss	Loss	Unchanged	Gain	Unchanged	NA	Unchanged	NA	Loss	Unchanged	Gain	Loss	Unchanged	Unchanged	Loss	Loss	NA	Unchanged	NA	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Loss	Gain	Gain	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Gain	Unchanged	NA	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Loss	NA	Loss	Unchanged	Loss	Unchanged	Unchanged	Gain	Loss	Loss	NA	NA	Unchanged	Unchanged	NA	Unchanged	Unchanged	Unchanged	Unchanged
+2p_status	2p	Copy number status of 2p	Unchanged	Unchanged	Unchanged	Loss	Loss	Gain	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Gain	Unchanged	Loss	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Gain	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Loss	Loss	NA	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Loss	NA	Unchanged	Unchanged	Gain	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	NA	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Gain	Gain	Unchanged	Loss	Loss	Unchanged	Unchanged	Unchanged	Loss	Loss	Loss	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Gain	Unchanged	NA	Unchanged	Loss	Unchanged	Loss
+2q_status	2q	Copy number status of 2q	Unchanged	Unchanged	Unchanged	NA	Loss	Gain	NA	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Gain	Unchanged	Loss	Loss	Unchanged	Unchanged	Unchanged	Unchanged	NA	Unchanged	Gain	Loss	Unchanged	Unchanged	Loss	Gain	Loss	Loss	Loss	NA	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Loss	Unchanged	NA	Unchanged	Gain	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Loss	NA	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Gain	Gain	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Gain	Unchanged	NA	Unchanged	Loss	NA	Loss
+3p_status	3p	Copy number status of 3p	Unchanged	Gain	Unchanged	NA	Loss	Unchanged	Loss	Unchanged	Loss	Loss	Loss	Loss	Gain	Unchanged	Unchanged	Loss	NA	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Gain	Gain	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Loss	NA	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Gain	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Gain	Gain	Loss	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	NA	NA	Unchanged	Unchanged	NA	Unchanged	Unchanged	Loss	Unchanged
+3q_status	3q	Copy number status of 3q	Unchanged	Gain	Unchanged	Unchanged	Loss	Loss	NA	Unchanged	Loss	Loss	NA	Loss	Gain	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Gain	Gain	Loss	Unchanged	Unchanged	Loss	Unchanged	NA	Unchanged	NA	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Loss	Loss	Gain	NA	Loss	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	NA	Unchanged	Loss	Unchanged	NA	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Unchanged	Loss	Gain	Gain	Loss	Loss	Unchanged	Loss	Unchanged	Unchanged	Gain	Unchanged	Unchanged	NA	NA	NA	NA	NA	Unchanged	Unchanged	Loss	Loss
+4p_status	4p	Copy number status of 4p	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Gain	NA	Loss	Unchanged	Gain	Unchanged	Gain	Loss	Unchanged	Gain	Gain	Gain	Gain	Unchanged	Unchanged	NA	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Unchanged	NA	Unchanged	Unchanged	Unchanged	Loss	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Gain	NA	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Gain	Gain	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Gain	Loss	Unchanged	Gain	Unchanged	NA	Gain	Loss	Unchanged	Unchanged	Gain	Gain	Unchanged	NA	NA	Unchanged	Unchanged	NA	Unchanged	NA	Unchanged	Unchanged
+4q_status	4q	Copy number status of 4q	Unchanged	Unchanged	Unchanged	NA	Gain	Unchanged	Loss	Unchanged	Unchanged	NA	Loss	Unchanged	Gain	Unchanged	Gain	Loss	Unchanged	Gain	NA	Gain	Gain	Loss	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Unchanged	NA	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	NA	Unchanged	Unchanged	Gain	Gain	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Gain	Gain	Unchanged	Unchanged	NA	Gain	NA	Gain	Loss	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Unchanged	NA	Unchanged	Unchanged	NA	NA	Unchanged	Unchanged	NA	Unchanged	Unchanged	NA	NA
+5p_status	5p	Copy number status of 5p	Loss	Unchanged	Gain	Unchanged	Gain	Gain	NA	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Gain	Gain	Gain	Gain	Gain	NA	Gain	NA	Unchanged	Unchanged	Unchanged	Gain	Gain	Gain	Unchanged	Gain	NA	NA	Gain	Gain	Unchanged	Gain	NA	Gain	Gain	Gain	Unchanged	Gain	NA	Gain	Gain	Unchanged	Unchanged	Gain	Unchanged	Gain	Unchanged	NA	NA	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Gain	Gain	Gain	Gain	Gain	Gain	Gain	NA	Unchanged	Unchanged	NA	NA	Gain	Loss	Gain	Gain	Loss	Gain	Gain	Gain	Gain	Gain	Gain	Gain	Unchanged	NA	NA	Gain	Gain	NA	Unchanged	Unchanged	Unchanged	NA
+5q_status	5q	Copy number status of 5q	Unchanged	Unchanged	Gain	Unchanged	Gain	Gain	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Gain	Gain	Gain	Gain	Gain	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Loss	Gain	Unchanged	Gain	Gain	Gain	NA	NA	NA	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Unchanged	NA	Gain	Unchanged	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Loss	Unchanged	Gain	Gain	Gain	Gain	Gain	Gain	Gain	Gain	Unchanged	Unchanged	Gain	Unchanged	Gain	Loss	Gain	Gain	NA	Gain	Gain	Gain	Gain	Gain	Gain	Gain	Gain	NA	NA	Gain	Gain	NA	Unchanged	NA	Unchanged	Unchanged
+6p_status	6p	Copy number status of 6p	Unchanged	Unchanged	Unchanged	NA	Loss	Gain	Unchanged	NA	Loss	Gain	Unchanged	Gain	Loss	Gain	Unchanged	Loss	Loss	Unchanged	Unchanged	Unchanged	Gain	Gain	Unchanged	Unchanged	Loss	Unchanged	Gain	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	NA	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Gain	Gain	Unchanged	Unchanged	Loss	NA	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Loss	NA	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Unchanged	Loss	Unchanged	Gain	Unchanged	Unchanged	Gain	Loss	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Unchanged	Unchanged	NA	Unchanged	Unchanged	Unchanged	NA
+6q_status	6q	Copy number status of 6q	Unchanged	Unchanged	Unchanged	NA	Loss	Gain	Loss	NA	Loss	Gain	Loss	Gain	Loss	Gain	Unchanged	Loss	Loss	Unchanged	Unchanged	Unchanged	Gain	NA	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	NA	Unchanged	Gain	Gain	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Loss	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Gain	Loss	NA	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Gain	Loss	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Loss	Unchanged	NA	Unchanged	NA	Unchanged	Gain
+7p_status	7p	Copy number status of 7p	Unchanged	NA	Gain	Loss	Unchanged	Gain	Unchanged	Gain	Loss	Gain	Unchanged	Loss	Gain	Unchanged	Gain	Gain	Unchanged	Unchanged	Gain	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Gain	Unchanged	Unchanged	Gain	Unchanged	Gain	Gain	Unchanged	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	NA	Unchanged	Unchanged	Loss	Gain	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Gain	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Gain	Gain	NA	NA	Unchanged	Unchanged	Gain	Loss	Gain	Gain	Unchanged	Gain	Gain	Gain	Gain	Unchanged	Gain	Loss	Unchanged	NA	NA	Unchanged	Gain	NA	Unchanged	Unchanged	Unchanged	Unchanged
+7q_status	7q	Copy number status of 7q	Unchanged	Gain	Gain	Loss	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Loss	Gain	Loss	Gain	Gain	Unchanged	Unchanged	Gain	Gain	Gain	Loss	Unchanged	Unchanged	Unchanged	Gain	Gain	Unchanged	Unchanged	Gain	Unchanged	Gain	NA	Unchanged	Unchanged	Gain	Unchanged	Gain	Unchanged	NA	NA	Unchanged	Unchanged	Gain	Gain	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Gain	Gain	Unchanged	NA	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Gain	Gain	NA	Unchanged	Unchanged	Unchanged	Gain	Loss	Gain	Gain	Unchanged	Gain	Gain	NA	Gain	Unchanged	Gain	Loss	Unchanged	NA	NA	Unchanged	Gain	NA	Unchanged	Unchanged	Unchanged	NA
+8p_status	8p	Copy number status of 8p	Unchanged	Unchanged	Unchanged	NA	Unchanged	Gain	Loss	Unchanged	Gain	Loss	Loss	Gain	Gain	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Loss	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Unchanged	Gain	NA	Unchanged	Loss	Gain	Loss	Gain	Loss	Unchanged	Gain	NA	Unchanged	Unchanged	Gain	Loss	Unchanged	Gain	Unchanged	NA	Unchanged	Loss	NA	Unchanged	Gain	Gain	Gain	Unchanged	Gain	NA	Unchanged	Gain	Loss	Unchanged	Loss	Unchanged	Loss	Loss	Loss	Gain	Loss	Unchanged	Gain	Loss	Loss	Loss	NA	NA	Unchanged	Unchanged	NA	Unchanged	Unchanged	Loss	Loss
+8q_status	8q	Copy number status of 8q	Unchanged	Unchanged	Unchanged	NA	Unchanged	Gain	Loss	Unchanged	Gain	Loss	NA	Gain	Gain	Unchanged	NA	Loss	Unchanged	Unchanged	Gain	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Loss	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Unchanged	Gain	Gain	Unchanged	Loss	Gain	Gain	Gain	Loss	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Gain	Unchanged	Gain	Unchanged	Loss	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Gain	Unchanged	Gain	Unchanged	Unchanged	Loss	NA	Loss	NA	Loss	Gain	Loss	Unchanged	Gain	Loss	Loss	Loss	NA	NA	Unchanged	Unchanged	NA	Unchanged	Unchanged	Loss	Loss
+9p_status	9p	Copy number status of 9p	Unchanged	Unchanged	Unchanged	NA	Gain	Unchanged	Loss	Unchanged	Loss	NA	Unchanged	Loss	Gain	Unchanged	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Loss	Unchanged	Unchanged	Loss	Gain	NA	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Gain	NA	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Loss	Loss	NA	Unchanged	Unchanged	Gain	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Gain	Gain	Unchanged	NA	NA	Unchanged	Unchanged	NA	Unchanged	Unchanged	Unchanged	NA
+9q_status	9q	Copy number status of 9q	Unchanged	Unchanged	Unchanged	NA	Gain	Unchanged	Unchanged	Gain	Unchanged	Gain	Unchanged	Loss	Gain	Gain	Gain	Gain	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Unchanged	NA	Unchanged	Unchanged	Gain	Loss	Unchanged	NA	Unchanged	Unchanged	NA	Unchanged	NA	Unchanged	Gain	Unchanged	Unchanged	NA	Unchanged	Unchanged	Unchanged	Gain	Gain	Gain	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Gain	NA	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Gain	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Gain	Gain	Unchanged	NA	NA	NA	Unchanged	NA	Unchanged	Unchanged	Unchanged	Unchanged
+10p_status	10p	Copy number status of 10p	Unchanged	Gain	Unchanged	Loss	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Gain	NA	Gain	Loss	Loss	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Gain	Loss	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Gain	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Loss	NA	Unchanged	Loss	Unchanged	NA	Unchanged	Unchanged	Loss	Gain	Gain	Gain	NA	Loss	Unchanged	Unchanged	NA	Gain	Loss	Unchanged	Loss	Unchanged	Gain	Unchanged	Unchanged	Gain	Unchanged	Unchanged	NA	NA	Unchanged	Unchanged	NA	Unchanged	Unchanged	Unchanged	Loss
+10q_status	10q	Copy number status of 10q	Unchanged	Gain	Unchanged	Loss	Unchanged	Unchanged	NA	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Gain	Unchanged	Gain	Loss	Loss	Unchanged	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Gain	Loss	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	NA	NA	Gain	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Gain	Gain	Gain	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Gain	Loss	Unchanged	Loss	Unchanged	NA	Unchanged	Unchanged	Gain	Unchanged	Unchanged	NA	NA	NA	Unchanged	NA	Unchanged	Unchanged	Unchanged	Loss
+11p_status	11p	Copy number status of 11p	Unchanged	Unchanged	Unchanged	NA	Loss	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Gain	Loss	Unchanged	Loss	Loss	Loss	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Loss	Loss	Loss	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Gain	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Loss	Gain	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Gain	Unchanged	NA	Unchanged	Loss	Loss	Loss
+11q_status	11q	Copy number status of 11q	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	NA	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Unchanged	Unchanged	NA	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Loss	Loss	Loss	Loss	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Loss	Gain	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Unchanged	Unchanged	NA	Unchanged	Loss	Loss	Loss
+12p_status	12p	Copy number status of 12p	Unchanged	Gain	Gain	NA	Gain	Gain	Unchanged	NA	Gain	Gain	Unchanged	Gain	Gain	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Gain	Gain	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Gain	Gain	Unchanged	Gain	Loss	Gain	Unchanged	Gain	Gain	Loss	Gain	Gain	Gain	Gain	Gain	Gain	Gain	Unchanged	NA	NA	Unchanged	Gain	NA	Unchanged	Unchanged	Loss	Gain
+12q_status	12q	Copy number status of 12q	Unchanged	Gain	Gain	Gain	Gain	Gain	Gain	NA	Gain	Gain	NA	Gain	Gain	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Gain	NA	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Unchanged	Gain	NA	Gain	Unchanged	Gain	Gain	Gain	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Gain	NA	Gain	Unchanged	Gain	Gain	Gain	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Gain	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Gain	NA	Gain	Gain	NA	Gain	Gain	Gain	Gain	Unchanged	NA	NA	Unchanged	Gain	NA	Unchanged	Unchanged	Unchanged	NA
+13q_status	13q	Copy number status of 13q	Unchanged	Gain	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	NA	NA	Loss	Loss	Loss	Loss	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Unchanged	NA	Unchanged	NA	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Gain	Unchanged	Unchanged	Loss	Loss	Loss	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Gain	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Loss	Unchanged	NA	Unchanged	Loss	Loss	Loss
+14q_status	14q	Copy number status of 14q	Unchanged	Unchanged	Gain	Unchanged	Gain	Loss	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Loss	Gain	Unchanged	Gain	Loss	Unchanged	Gain	Unchanged	Gain	Loss	Unchanged	Gain	Loss	Unchanged	Gain	Loss	Unchanged	Loss	Unchanged	NA	NA	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	NA	Unchanged	NA	Gain	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	NA	Unchanged	Unchanged	Loss	NA	Unchanged	Gain	Unchanged	Loss	Gain	Unchanged	Loss	Gain	NA	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Gain	Unchanged	Unchanged	Gain	Loss	Unchanged	NA	NA	Unchanged	Unchanged	NA	Unchanged	Unchanged	Unchanged	Loss
+15q_status	15q	Copy number status of 15q	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Loss	NA	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Loss	Loss	Unchanged	Gain	Gain	Loss	Unchanged	NA	Loss	Unchanged	Gain	Loss	Unchanged	Loss	Unchanged	Gain	NA	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	NA	Unchanged	Loss	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Gain	Loss	Unchanged	Unchanged	Loss	Gain	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Gain	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Loss	Unchanged	NA	Unchanged	Loss	Unchanged	Loss
+16p_status	16p	Copy number status of 16p	Unchanged	Unchanged	Gain	Loss	Gain	Unchanged	Loss	Unchanged	Unchanged	Gain	Loss	Unchanged	Gain	Unchanged	Gain	Gain	Unchanged	Gain	Gain	Gain	Unchanged	NA	Unchanged	Unchanged	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Unchanged	Gain	Loss	Gain	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Loss	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Gain	NA	Gain	Gain	Unchanged	Gain	Unchanged	Unchanged	Gain	Unchanged	Loss	Unchanged	Gain	Unchanged	Loss	Gain	Gain	Gain	Unchanged	Unchanged	NA	NA	Unchanged	Gain	NA	Unchanged	Unchanged	Unchanged	Gain
+16q_status	16q	Copy number status of 16q	Unchanged	Unchanged	Gain	NA	Gain	Unchanged	Loss	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Gain	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Gain	Gain	Unchanged	Unchanged	Unchanged	Gain	Loss	Gain	Loss	Gain	Unchanged	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	NA	Gain	Unchanged	Unchanged	NA	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Gain	Gain	Gain	NA	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Gain	Unchanged	Gain	NA	Unchanged	Gain	NA	Unchanged	Loss	Unchanged	Loss	Unchanged	Gain	Unchanged	Unchanged	Gain	Gain	Gain	Unchanged	Unchanged	NA	NA	NA	Gain	NA	Unchanged	Unchanged	NA	NA
+17p_status	17p	Copy number status of 17p	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Loss	Loss	Loss	Loss	Gain	Loss	Unchanged	Loss	NA	Unchanged	Unchanged	Unchanged	Unchanged	NA	Unchanged	Loss	Unchanged	Unchanged	Gain	Loss	Unchanged	Loss	Loss	Unchanged	NA	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	NA	Loss	Unchanged	Unchanged	NA	Unchanged	Unchanged	Loss	NA	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Unchanged	NA	Unchanged	Loss	NA	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Gain	Loss	NA	NA	NA	Unchanged	NA	Unchanged	NA	Loss	Unchanged
+17q_status	17q	Copy number status of 17q	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Gain	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	NA	Unchanged	NA	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	NA	Unchanged	Unchanged	Unchanged	NA	Loss	Loss	Unchanged	Unchanged	NA	Unchanged	Loss	NA	NA	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Gain	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Unchanged	NA	Loss	Loss	NA	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Gain	Loss	NA	NA	NA	Unchanged	NA	Unchanged	NA	Loss	Loss
+18p_status	18p	Copy number status of 18p	Unchanged	Unchanged	Unchanged	Loss	Loss	Loss	Loss	Gain	Loss	Loss	Loss	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Loss	Loss	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Unchanged	Gain	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Loss	Loss	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Unchanged	Unchanged	NA	Unchanged	Loss	Loss	Unchanged
+18q_status	18q	Copy number status of 18q	Unchanged	Unchanged	Unchanged	Loss	Loss	Loss	Loss	Gain	Loss	Loss	Loss	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Unchanged	NA	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	NA	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Unchanged	Gain	Unchanged	Loss	NA	Unchanged	Unchanged	Unchanged	Loss	NA	Loss	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Unchanged	Unchanged	NA	Unchanged	Loss	Loss	NA
+19p_status	19p	Copy number status of 19p	Unchanged	Unchanged	Gain	NA	Gain	Gain	Gain	Unchanged	Gain	Gain	Loss	Gain	Gain	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Unchanged	Gain	Loss	Unchanged	NA	Unchanged	Gain	Unchanged	Unchanged	Gain	Unchanged	Gain	Gain	Unchanged	Gain	Unchanged	Unchanged	Gain	Loss	Gain	Gain	Unchanged	Loss	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Gain	Unchanged	Gain	Unchanged	Unchanged	Gain	Unchanged	Loss	Gain	Gain	Gain	Unchanged	Loss	Unchanged	Unchanged	Loss	NA	Gain	Unchanged	Gain	Gain	Gain	Gain	Unchanged	Gain	Gain	NA	NA	NA	NA	Gain	NA	Unchanged	Unchanged	Unchanged	Gain
+19q_status	19q	Copy number status of 19q	Loss	Unchanged	Gain	Gain	Gain	Gain	Gain	Unchanged	Gain	Gain	Unchanged	Gain	Gain	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Unchanged	NA	Unchanged	Gain	Unchanged	Unchanged	Gain	Loss	Unchanged	Unchanged	Unchanged	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Gain	Unchanged	Gain	Unchanged	Unchanged	Gain	Loss	Gain	Gain	Unchanged	Loss	NA	Gain	Unchanged	NA	Gain	Gain	Gain	Gain	NA	NA	Gain	Unchanged	Unchanged	Gain	NA	Loss	Gain	Gain	Gain	Unchanged	Loss	Unchanged	Unchanged	NA	Gain	Gain	NA	Gain	Unchanged	Gain	Gain	Unchanged	Gain	Gain	Unchanged	NA	NA	Gain	Gain	NA	Unchanged	Unchanged	Unchanged	Unchanged
+20p_status	20p	Copy number status of 20p	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Gain	Loss	Unchanged	Unchanged	Loss	Loss	Unchanged	Gain	Gain	Gain	Gain	Unchanged	Gain	NA	Gain	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Gain	Loss	Gain	Unchanged	Gain	Unchanged	Gain	Unchanged	Gain	Loss	Gain	Unchanged	Gain	Gain	Unchanged	Unchanged	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	NA	Unchanged	Gain	Unchanged	Unchanged	Gain	Gain	Gain	Gain	NA	Unchanged	Gain	Gain	Gain	Loss	Gain	Gain	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Gain	Unchanged	Gain	Gain	Loss	Gain	Gain	Unchanged	Gain	Unchanged	NA	NA	Gain	Gain	NA	Unchanged	Unchanged	Loss	Loss
+20q_status	20q	Copy number status of 20q	Unchanged	Gain	Unchanged	NA	Loss	Gain	Loss	Gain	Unchanged	Loss	Unchanged	Unchanged	Gain	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Unchanged	Gain	NA	Gain	Unchanged	Gain	Unchanged	Gain	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Loss	Unchanged	Gain	Unchanged	Unchanged	Gain	Gain	Gain	Gain	Gain	Unchanged	Gain	Gain	Gain	Loss	Gain	Gain	Gain	Gain	Unchanged	Unchanged	NA	Unchanged	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Gain	Loss	Gain	Gain	Unchanged	Gain	Unchanged	NA	NA	Gain	Gain	NA	Unchanged	Unchanged	Unchanged	Loss
+21q_status	21q	Copy number status of 21q	Unchanged	Unchanged	Gain	Loss	Loss	Gain	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Gain	Unchanged	Gain	Loss	Gain	Gain	Gain	Gain	Loss	Unchanged	NA	Loss	Unchanged	Gain	Loss	Unchanged	NA	Unchanged	Gain	Loss	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Gain	Gain	Unchanged	Gain	Unchanged	Loss	Unchanged	Gain	Unchanged	Gain	Gain	Gain	Unchanged	Gain	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Gain	Gain	Unchanged	Unchanged	Loss	Loss	NA	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Unchanged	Gain	NA	Unchanged	NA	NA	Unchanged	Unchanged	NA	Unchanged	Loss	Unchanged	Loss
+22q_status	22q	Copy number status of 22q		Unchanged	Unchanged	NA	Loss	Loss	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Loss	Loss	Unchanged	Loss	Loss	Loss	Gain	Unchanged	Unchanged	Unchanged	Unchanged	Loss	Loss	Loss	Gain	Loss	Loss	Loss	Loss	Loss	NA	Unchanged	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	Unchanged	Loss	Unchanged	Unchanged	Loss	Unchanged	Unchanged	Loss	Gain	Unchanged	Loss	Unchanged	Loss	Loss	Unchanged	Loss	Unchanged	Loss	NA	Unchanged	Loss	NA	Unchanged	Loss	Unchanged	Loss	Loss	Loss	Loss	Loss	Unchanged	Unchanged	Loss	Loss	Loss	NA	NA	Loss	Unchanged	NA	Unchanged	Loss	Unchanged	Loss

acc_tcga_pan_can_atlas_2018/data_clinical_patient.txt ADDED Viewed

	@@ -0,0 +1,97 @@

+#Patient Identifier	Subtype	TCGA PanCanAtlas Cancer Type Acronym	Other Patient ID	Diagnosis Age	Sex	Neoplasm Disease Stage American Joint Committee on Cancer Code	American Joint Committee on Cancer Publication Version Type	Last Communication Contact from Initial Pathologic Diagnosis Date	Birth from Initial Pathologic Diagnosis Date	Last Alive Less Initial Pathologic Diagnosis Date Calculated Day Value	Ethnicity Category	Form completion date	Neoadjuvant Therapy Type Administered Prior To Resection Text	ICD-10 Classification	International Classification of Diseases for Oncology, Third Edition ICD-O-3 Histology Code	International Classification of Diseases for Oncology, Third Edition ICD-O-3 Site Code	Informed consent verified	New Neoplasm Event Post Initial Therapy Indicator	American Joint Committee on Cancer Metastasis Stage Code	Neoplasm Disease Lymph Node Stage American Joint Committee on Cancer Code	American Joint Committee on Cancer Tumor Stage Code	Person Neoplasm Cancer Status	Primary Lymph Node Presentation Assessment	Prior Diagnosis	Race Category	Radiation Therapy	Patient Weight	In PanCan Pathway Analysis	Overall Survival Status	Overall Survival (Months)	Disease-specific Survival status	Months of disease-specific survival	Disease Free Status	Disease Free (Months)	Progression Free Status	Progress Free Survival (Months)	Genetic Ancestry Label
+#Identifier to uniquely specify a patient.	Subtype	Text field to hold cancer type acronym used by TCGA PanCanAtlas.	Legacy DMP patient identifier (DMPnnnn)	Age at which a condition or disease was first diagnosed.	Sex	The extent of a cancer, especially whether the disease has spread from the original site to other parts of the body based on AJCC staging criteria.	The version or edition of the American Joint Committee on Cancer Cancer Staging Handbooks, a publication by the group formed for the purpose of developing a system of clinical staging for cancer that is acceptable to the American medical profession and is compatible with other accepted classifications.	Time interval from the date of last followup to the date of initial pathologic diagnosis, represented as a calculated number of days..	Time interval from a person's date of birth to the date of initial pathologic diagnosis, represented as a calculated number of days.	Time interval from the last day on which a person is known to be alive to the date of initial pathologic diagnosis, represented as a calculated number of days.	The text for reporting information about ethnicity.	Form completion date	Text term to describe the patient's history of neoadjuvant treatment and the kind of treatment given prior to resection of the tumor.	10th revision of the International Statistical Classification of Diseases and Related Health Problems.	The third edition of the International Classification of Diseases for Oncology, published in 2000, used principally in tumor and cancer registries for coding the site (topography) and the histology (morphology) of neoplasms._The study of the structure of the cells and their arrangement to constitute tissues and, finally, the association among these to form organs.  In pathology, the microscopic process of identifying normal and abnormal morphologic characteristics in tissues, by employing various cytochemical and immunocytochemical stains._A system of numbered categories for representation of data.	The third edition of the International Classification of Diseases for Oncology, published in 2000, used principally in tumor and cancer registries for coding the site (topography) and the histology (morphology) of neoplasms._The description of an anatomical region or of a body part._Named locations of, or within, the body._A system of numbered categories for representation of data.	Informed consent verified	Yes/No/Unknown indicator to identify whether a patient has had a new tumor event after initial treatment.	Code to represent the defined absence or presence of distant spread or metastases (M) to locations via vascular channels or lymphatics beyond the regional lymph nodes, using criteria established by the American Joint Committee on Cancer (AJCC).	The codes that represent the stage of cancer based on the nodes present (N stage) according to criteria based on multiple editions of the AJCC's Cancer Staging Manual.	Code of pathological T (primary tumor) to define the size or contiguous extension of the primary tumor (T), using staging criteria from the American Joint Committee on Cancer (AJCC).	Person neoplasm cancer status.	Primary lymph node presentation assessment.	Prior diagnosis.	The text for reporting information about race.	Radiation Therapy.	Weight measured in kilograms.	Patient Part of PanCan Pathway Analysis	Overall patient survival status.	Overall survival in months since initial diagonosis.	The time period usually begins at the time of diagnosis or at the start of treatment and ends at the time of death.	The time period (months) usually begins at the time of diagnosis or at the start of treatment and ends at the time of death.	Disease free status since initial treatment.	Disease free (months) since initial treatment.	Progression Free Status	Progress Free Survival (Months)	Genetic ancestries were determined using five different methods as described in Carrot-Zhang et al (2020). These consensus calls were created based on the ancestral population that received the majority of assignments for each patient.
+#STRING	STRING	STRING	STRING	NUMBER	STRING	STRING	STRING	NUMBER	NUMBER	NUMBER	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	NUMBER	STRING	STRING	NUMBER	STRING	NUMBER	STRING	NUMBER	STRING	NUMBER	STRING
+#1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	9	1	1	1	1	1	1	1	1
+PATIENT_ID	SUBTYPE	CANCER_TYPE_ACRONYM	OTHER_PATIENT_ID	AGE	SEX	AJCC_PATHOLOGIC_TUMOR_STAGE	AJCC_STAGING_EDITION	DAYS_LAST_FOLLOWUP	DAYS_TO_BIRTH	DAYS_TO_INITIAL_PATHOLOGIC_DIAGNOSIS	ETHNICITY	FORM_COMPLETION_DATE	HISTORY_NEOADJUVANT_TRTYN	ICD_10	ICD_O_3_HISTOLOGY	ICD_O_3_SITE	INFORMED_CONSENT_VERIFIED	NEW_TUMOR_EVENT_AFTER_INITIAL_TREATMENT	PATH_M_STAGE	PATH_N_STAGE	PATH_T_STAGE	PERSON_NEOPLASM_CANCER_STATUS	PRIMARY_LYMPH_NODE_PRESENTATION_ASSESSMENT	PRIOR_DX	RACE	RADIATION_THERAPY	WEIGHT	IN_PANCANPATHWAYS_FREEZE	OS_STATUS	OS_MONTHS	DSS_STATUS	DSS_MONTHS	DFS_STATUS	DFS_MONTHS	PFS_STATUS	PFS_MONTHS	GENETIC_ANCESTRY_LABEL
+TCGA-OR-A5J1	ACC	ACC	B3164F7B-C826-4E08-9EE6-8FF96D29B913	58	Male	STAGE II			-21496	0		4/2/14	No	C74.0	8370/1	C74.0	Yes	Yes		N0	T2	With Tumor		No	White	No		Yes	1:DECEASED	44.54745701	1:DEAD WITH TUMOR	44.54745701	1:Recurred/Progressed	24.78876944	1:PROGRESSION	24.78876944	EUR
+TCGA-OR-A5J2	ACC	ACC	8E7C2E31-D085-4B75-A970-162526DD07A0	44	Female	STAGE IV			-16090	0	Hispanic Or Latino	12/3/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T3	With Tumor	Yes	No	White	No		Yes	1:DECEASED	55.13364237	1:DEAD WITH TUMOR	55.13364237			1:PROGRESSION	9.50126574	EUR
+TCGA-OR-A5J3	ACC	ACC	DFD687BC-6E69-42F7-AF94-D17FC150D1A1	23	Female	STAGE III		2091	-8624	0	Hispanic Or Latino	12/2/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T3	With Tumor	Yes	No	White	No		Yes	0:LIVING	68.74445212	0:ALIVE OR DEAD TUMOR FREE	68.74445212	1:Recurred/Progressed	1.742446658	1:PROGRESSION	1.742446658	NA
+TCGA-OR-A5J4		ACC	5F3E2974-F1DF-47A2-8A8A-29BB525EEEF6	23	Female	STAGE IV			-8451	0	Hispanic Or Latino	12/2/13	No	C74.0	8370/3	C74.0	Yes	Yes		N1	T3	With Tumor	Yes	No	White	No		No	1:DECEASED	13.90669691	1:DEAD WITH TUMOR	13.90669691			1:PROGRESSION	4.142420357	NA
+TCGA-OR-A5J5	ACC	ACC	802DBD0D-EF07-4C91-AB8D-1DD39532E947	30	Male	STAGE III			-11171	0	Hispanic Or Latino	12/3/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T4	With Tumor	No	No	White	No		Yes	1:DECEASED	11.9998685	1:DEAD WITH TUMOR	11.9998685			1:PROGRESSION	1.643817602	NA
+TCGA-OR-A5J6	ACC	ACC	C8898B42-B704-45A0-9829-144B98F416E0	29	Female	STAGE II		2703	-10839	0	Hispanic Or Latino	12/3/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No	Black or African American	No		Yes	0:LIVING	88.86477956	0:ALIVE OR DEAD TUMOR FREE	88.86477956	0:DiseaseFree	88.86477956	0:CENSORED	88.86477956	AFR_ADMIX
+TCGA-OR-A5J7	ACC	ACC	075DBFD0-9CF4-4877-884F-AE858902C79E	30	Female	STAGE III			-11279	0	Hispanic Or Latino	12/2/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T3	With Tumor	Yes	No	White	No		Yes	1:DECEASED	16.1094125	1:DEAD WITH TUMOR	16.1094125			1:PROGRESSION	5.325969031	NA
+TCGA-OR-A5J8	ACC	ACC	08E0D412-D4D8-4D13-B792-A4DD0BD9EC2B	66	Male	STAGE III			-24266	0	Hispanic Or Latino	12/3/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T3	With Tumor	Yes	No	White	Yes		Yes	1:DECEASED	19.03540783	1:DEAD WITH TUMOR	19.03540783	1:Recurred/Progressed	17.42446658	1:PROGRESSION	17.42446658	EUR
+TCGA-OR-A5J9	ACC	ACC	A53E9117-0A49-40D8-AF40-7867370B671A	22	Female	STAGE II		1352	-8175	0	Hispanic Or Latino	12/3/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	With Tumor	No	No	White	No		Yes	0:LIVING	44.44882796	0:ALIVE OR DEAD TUMOR FREE	44.44882796	1:Recurred/Progressed	13.61080975	1:PROGRESSION	13.61080975	NA
+TCGA-OR-A5JA	ACC	ACC	48402D61-3A6B-4603-BFA0-B1A38A47D34D	53	Female	STAGE IV			-19436	0		9/17/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T4	With Tumor	No	No	White	No		Yes	1:DECEASED	30.31199658	1:DEAD WITH TUMOR	30.31199658			1:PROGRESSION	30.31199658	EUR
+TCGA-OR-A5JB	ACC	ACC	D63F2F1E-1970-445F-907B-23CF4D9EFD83	52	Male	STAGE IV			-19172	0		9/17/13	No	C74.0	8370/3	C74.0	Yes			N0	T4			No	White			Yes	1:DECEASED	18.11486997		18.11486997			0:CENSORED	18.11486997	EUR
+TCGA-OR-A5JC	ACC	ACC	BDFCD747-F6A2-42E2-BC9B-483112205FA8	37	Male				-13862	0		9/17/13	No	C74.0	8370/3	C74.0	Yes						No	No	White			Yes	1:DECEASED	57.53361607		57.53361607			0:CENSORED	57.53361607	EUR
+TCGA-OR-A5JD	ACC	ACC	240DCA72-76E0-4D57-978D-1242E6E7ED68	57	Female	STAGE II		3038	-20989	0		9/17/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free		No	White	No		Yes	0:LIVING	99.8783575	0:ALIVE OR DEAD TUMOR FREE	99.8783575	0:DiseaseFree	99.8783575	0:CENSORED	99.8783575	EUR
+TCGA-OR-A5JE	ACC	ACC	BAFE2638-4ADC-4957-9D62-D7EEBE5DD2F9	17	Female	STAGE I			-6455	0		9/17/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T1	With Tumor		No	White	No		Yes	1:DECEASED	69.20472104	1:DEAD WITH TUMOR	69.20472104			1:PROGRESSION	15.68201992	EUR
+TCGA-OR-A5JF	ACC	ACC	DAFB9844-1A5C-4AF8-B382-59C751942BB8	69	Female	STAGE II		2015	-25502	0		10/3/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free		No	White	Yes		Yes	0:LIVING	66.24584936	0:ALIVE OR DEAD TUMOR FREE	66.24584936	0:DiseaseFree	66.24584936	0:CENSORED	66.24584936	EUR_ADMIX
+TCGA-OR-A5JG	ACC	ACC	71892706-F8B6-44E6-8DE4-6CBB43F612E0	61	Male	STAGE IV			-22390	0		10/3/13	No	C74.0	8370/3	C74.0	Yes			N1	T4	With Tumor	Yes	No	White			Yes	1:DECEASED	17.78610645	1:DEAD WITH TUMOR	17.78610645			1:PROGRESSION	17.78610645	EUR
+TCGA-OR-A5JH		ACC	4F845FEA-E823-47D6-89FB-36EE478A43B8	32	Female	STAGE II		2110	-11994	0		2/6/14	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free		No	White	No		No	0:LIVING	69.3691028	0:ALIVE OR DEAD TUMOR FREE	69.3691028	0:DiseaseFree	69.3691028	0:CENSORED	69.3691028	EUR
+TCGA-OR-A5JI	ACC	ACC	B7ADB786-1F81-43CA-AC72-7243966CD439	22	Male	STAGE I		2331	-8177	0		9/18/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T1	Tumor Free	No	No	White	No		Yes	0:LIVING	76.63477661	0:ALIVE OR DEAD TUMOR FREE	76.63477661	0:DiseaseFree	76.63477661	0:CENSORED	76.63477661	EUR
+TCGA-OR-A5JJ	ACC	ACC	9EC86C06-E7A9-4EA6-B36D-6F832909054B	65	Male	STAGE IV		309	-24082	0		10/3/13	No	C74.0	8370/3	C74.0	Yes	No		N1	T4	With Tumor	Yes	No	White	No		Yes	1:DECEASED	16.1094125	1:DEAD WITH TUMOR	16.1094125			1:PROGRESSION	16.1094125	EUR
+TCGA-OR-A5JK	ACC	ACC	A477B55D-A591-482F-A554-D8EF7298C23D	49	Male	STAGE IV		1497	-18214	0		10/3/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T4	Tumor Free		No	White	Yes		Yes	0:LIVING	49.215899	0:ALIVE OR DEAD TUMOR FREE	49.215899			0:CENSORED	49.215899	EUR
+TCGA-OR-A5JL	ACC	ACC	0ACC28BC-D348-41DF-8F49-BC0332EB9BE4	36	Female	STAGE I		2056	-13155	0		9/18/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T1	Tumor Free	No	No	White	No		Yes	0:LIVING	67.59377979	0:ALIVE OR DEAD TUMOR FREE	67.59377979	0:DiseaseFree	67.59377979	0:CENSORED	67.59377979	NA
+TCGA-OR-A5JM	ACC	ACC	FB54458D-C373-46C2-841E-82663E13EFAA	25	Female	STAGE IV			-9359	0		10/3/13	Yes	C74.0	8370/3	C74.0	Yes	Yes		N0	T4	With Tumor		No	White	Yes		Yes	1:DECEASED	18.47650985	1:DEAD WITH TUMOR	18.47650985			1:PROGRESSION	2.367097347	EUR
+TCGA-OR-A5JO	ACC	ACC	4FBBBE43-3C0E-4475-BCF8-3745BD7195EB	26	Female	STAGE I		1194	-9547	0		9/18/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T1	Tumor Free	No	No	White	No		Yes	0:LIVING	39.25436434	0:ALIVE OR DEAD TUMOR FREE	39.25436434	0:DiseaseFree	39.25436434	0:CENSORED	39.25436434	EUR
+TCGA-OR-A5JP	ACC	ACC	0B73CBBA-5520-4610-B649-912D76114033	40	Male	STAGE II		464	-14667	0		4/2/14	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No	White	No		Yes	0:LIVING	15.25462735	0:ALIVE OR DEAD TUMOR FREE	15.25462735	0:DiseaseFree	15.25462735	0:CENSORED	15.25462735	EUR
+TCGA-OR-A5JQ	ACC	ACC	199560CB-15E5-4276-865A-7D44D47C856C	26	Female	STAGE II		1103	-9667	0		9/18/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No	White	No		Yes	0:LIVING	36.2626163	0:ALIVE OR DEAD TUMOR FREE	36.2626163	0:DiseaseFree	36.2626163	0:CENSORED	36.2626163	EUR
+TCGA-OR-A5JR	ACC	ACC	A19104D6-B6A6-4878-AF2C-783679070A05	45	Male	STAGE I		3688	-16604	0		9/9/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T1	Tumor Free	No	No	White	No		Yes	0:LIVING	121.2479863	0:ALIVE OR DEAD TUMOR FREE	121.2479863	0:DiseaseFree	121.2479863	0:CENSORED	121.2479863	EUR
+TCGA-OR-A5JS	ACC	ACC	82940E94-AC74-4A9B-9DA5-9E4B7D4D45C0	65	Female	STAGE II		383	-24017	0		9/9/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	With Tumor	No	No	White	Yes		Yes	0:LIVING	12.59164283	0:ALIVE OR DEAD TUMOR FREE	12.59164283			1:PROGRESSION	5.457474439	EUR
+TCGA-OR-A5JT	ACC	ACC	C0E1A036-BE4C-4FB5-BB50-E2431BE60ED4	65	Female	STAGE II		907	-23794	0		9/9/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	With Tumor	Yes	No	White	Yes		Yes	0:LIVING	29.8188513	0:ALIVE OR DEAD TUMOR FREE	29.8188513			0:CENSORED	29.8188513	EUR
+TCGA-OR-A5JU		ACC	CAC8EABA-9E40-4048-B8CC-87574F048D91	58	Female	STAGE III			-21292	0		2/6/14	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T3	With Tumor	No	No	White	Yes		No	1:DECEASED	9.50126574	1:DEAD WITH TUMOR	9.50126574			1:PROGRESSION	8.810862347	EUR
+TCGA-OR-A5JV	ACC	ACC	388B8788-A635-4BC9-9B73-D204B2256747	55	Male	STAGE II		2023	-20319	0		9/9/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	Yes	No	White	No		Yes	0:LIVING	66.50886018	0:ALIVE OR DEAD TUMOR FREE	66.50886018	0:DiseaseFree	66.50886018	1:PROGRESSION	31.33116349	EUR
+TCGA-OR-A5JW	ACC	ACC	63B7B596-CB55-41DC-B862-A6C3A058DFE2	47	Male	STAGE II		2202	-17513	0		9/9/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No	White	Yes		Yes	0:LIVING	72.39372719	0:ALIVE OR DEAD TUMOR FREE	72.39372719	0:DiseaseFree	72.39372719	0:CENSORED	72.39372719	EUR
+TCGA-OR-A5JX	ACC	ACC	42F69B2B-F3AA-4F4E-AC3A-149E14789927	50	Male	STAGE III		950	-18402	0		9/10/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T3	Tumor Free	Yes	No	White	Yes		Yes	0:LIVING	31.23253444	0:ALIVE OR DEAD TUMOR FREE	31.23253444			0:CENSORED	31.23253444	EUR
+TCGA-OR-A5JY	ACC	ACC	344F7EA4-2BD4-4F2D-89F2-9FC7F572A3D6	68	Female	STAGE IV			-25190	0		9/10/13	No	C74.0	8370/3	C74.0	Yes	Yes		N1	T4	With Tumor	Yes	No	White	Yes		Yes	1:DECEASED	18.14774633	1:DEAD WITH TUMOR	18.14774633			1:PROGRESSION	2.465726403	EUR
+TCGA-OR-A5JZ	ACC	ACC	94CDAC79-2B4E-483A-8F17-3E0C9BE589D0	60	Male	STAGE II		822	-22218	0		9/10/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	Tumor Free	No	No	White	Yes		Yes	0:LIVING	27.02436138	0:ALIVE OR DEAD TUMOR FREE	27.02436138			1:PROGRESSION	8.120458954	EUR
+TCGA-OR-A5K0	ACC	ACC	EDC62C30-CACC-457D-96BA-D05ED35432A3	69	Female	STAGE II		1029	-25400	0		9/16/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	With Tumor	No	Yes	White	No		Yes	0:LIVING	33.82976625	0:ALIVE OR DEAD TUMOR FREE	33.82976625			1:PROGRESSION	21.66551599	EUR
+TCGA-OR-A5K1	ACC	ACC	F8E77BB6-E521-4A6A-9CB4-4B58EE38CA7F	48	Male	STAGE II		3289	-17596	0		9/10/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	Tumor Free	No	No	White	No		Yes	0:LIVING	108.1303219	0:ALIVE OR DEAD TUMOR FREE	108.1303219	1:Recurred/Progressed	27.15586679	1:PROGRESSION	27.15586679	EUR
+TCGA-OR-A5K2	ACC	ACC	6D980941-219E-40A0-9B41-E84C3FB0BD1A	32	Female	STAGE III			-11970	0		9/10/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T4	With Tumor	Yes	No	White	Yes		Yes	1:DECEASED	32.67909393	1:DEAD WITH TUMOR	32.67909393			1:PROGRESSION	3.189006148	EUR
+TCGA-OR-A5K3	ACC	ACC	C72B973B-4719-46AB-AC99-05D14088D3BC	53	Male	STAGE II		3465	-19375	0		9/11/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No	White	No		Yes	0:LIVING	113.9165598	0:ALIVE OR DEAD TUMOR FREE	113.9165598	0:DiseaseFree	113.9165598	0:CENSORED	113.9165598	EUR
+TCGA-OR-A5K4	ACC	ACC	70F1569E-F8F5-4F1D-BF18-D0586B29077D	64	Female	STAGE III		1082	-23481	0		9/11/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T4	Tumor Free	No	No	White	Yes		Yes	0:LIVING	35.57221291	0:ALIVE OR DEAD TUMOR FREE	35.57221291	0:DiseaseFree	35.57221291	0:CENSORED	35.57221291	EUR
+TCGA-OR-A5K5	ACC	ACC	CF332DAA-F335-4AF1-81DE-CBFDAFB0F764	59	Female	STAGE III		253	-21907	0		9/11/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T3	With Tumor	Yes	No	White	Yes		Yes	1:DECEASED	16.37242332	1:DEAD WITH TUMOR	16.37242332			1:PROGRESSION	3.55064602	EUR
+TCGA-OR-A5K6	ACC	ACC	28153E3E-8515-4852-AAA0-247F86399F27	56	Female	STAGE II		1493	-20657	0	Not Hispanic Or Latino	10/8/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	With Tumor	No	No	White	No		Yes	0:LIVING	49.0843936	0:ALIVE OR DEAD TUMOR FREE	49.0843936	1:Recurred/Progressed	12.85465365	1:PROGRESSION	12.85465365	EUR
+TCGA-OR-A5K8	ACC	ACC	1AE9CD13-73EF-4B1A-A734-4C465C73BC8E	39	Male	STAGE II		749	-14435	0	Not Hispanic Or Latino	10/8/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No	White	No		Yes	0:LIVING	24.62438768	0:ALIVE OR DEAD TUMOR FREE	24.62438768	0:DiseaseFree	24.62438768	0:CENSORED	24.62438768	EUR
+TCGA-OR-A5K9	ACC	ACC	D890CBF7-41D8-4992-99C2-24C60C77B156	61	Female	STAGE II			-22596	0		9/11/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	With Tumor	No	No	White	No		Yes	1:DECEASED	11.3094651	1:DEAD WITH TUMOR	11.3094651			1:PROGRESSION	7.758819081	EUR
+TCGA-OR-A5KB		ACC	09454ED6-64BC-4A35-AF44-7C4344623D45	61	Female	STAGE II		741	-22550	0	Not Hispanic Or Latino	5/8/14	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	With Tumor	Yes	No	White	No		No	0:LIVING	24.36137686	0:ALIVE OR DEAD TUMOR FREE	24.36137686			1:PROGRESSION	7.035539337	EUR
+TCGA-OR-A5KO	ACC	ACC	B4B41A43-EE45-4AA3-ABF0-100DB752A6AC	39	Female	STAGE IV		1414	-14606	0	Not Hispanic Or Latino	11/5/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T4	With Tumor		No	White	No		Yes	0:LIVING	46.48716179	0:ALIVE OR DEAD TUMOR FREE	46.48716179			1:PROGRESSION	17.78610645	EUR
+TCGA-OR-A5KP		ACC	653F1D34-73E9-4216-B40B-E25C1CFC7943	45	Female	STAGE II		2777	-16702	0	Not Hispanic Or Latino	6/27/14	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	Tumor Free	Yes	Yes	White	No		No	0:LIVING	91.29762962	0:ALIVE OR DEAD TUMOR FREE	91.29762962	1:Recurred/Progressed	41.09544005	1:PROGRESSION	41.09544005	EUR
+TCGA-OR-A5KQ		ACC	A3383252-1161-4B65-8BAC-125A6EDA3D08	20	Female	STAGE II		2677	-7459	0	Not Hispanic Or Latino	6/26/14	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free		No	White	No		No	0:LIVING	88.00999441	0:ALIVE OR DEAD TUMOR FREE	88.00999441	0:DiseaseFree	88.00999441	0:CENSORED	88.00999441	EUR
+TCGA-OR-A5KS		ACC	11D8A9C2-14D8-4FC2-8388-386051E408B1	72	Male	STAGE II		2549	-26404	0	Not Hispanic Or Latino	6/26/14	No	C74.0	8370/1	C74.0	Yes	No		N0	T2	Tumor Free	No	No	White	No		No	0:LIVING	83.80182135	0:ALIVE OR DEAD TUMOR FREE	83.80182135	0:DiseaseFree	83.80182135	0:CENSORED	83.80182135	EUR
+TCGA-OR-A5KT	ACC	ACC	DE7F06AA-9638-4389-AC8E-711ADFA0F2A5	44	Female	STAGE I		2895	-16217	0	Not Hispanic Or Latino	4/2/14	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T1	Tumor Free		No	White	No		Yes	0:LIVING	95.17703916	0:ALIVE OR DEAD TUMOR FREE	95.17703916	1:Recurred/Progressed	69.00746293	1:PROGRESSION	69.00746293	EUR
+TCGA-OR-A5KU	ACC	ACC	424A497A-48B9-4507-B234-C4FD08C8ACAD	37	Female	STAGE II		4673	-13559	0	Not Hispanic Or Latino	11/5/13	No	C74.0	8370/1	C74.0	Yes	No		N0	T2	Tumor Free	Yes	No	White	No		Yes	0:LIVING	153.6311931	0:ALIVE OR DEAD TUMOR FREE	153.6311931	0:DiseaseFree	153.6311931	0:CENSORED	153.6311931	EUR
+TCGA-OR-A5KV	ACC	ACC	202F7A77-9E5A-4F12-8FFE-78AE5527A746	17	Female	STAGE III		3878	-6250	0	Not Hispanic Or Latino	11/5/13	No	C74.0	8370/3	C74.0	Yes	Yes		N1	T2	Tumor Free	Yes	No	White	Yes		Yes	0:LIVING	127.4944932	0:ALIVE OR DEAD TUMOR FREE	127.4944932	1:Recurred/Progressed	36.69000888	1:PROGRESSION	36.69000888	EUR
+TCGA-OR-A5KW	ACC	ACC	69F4F19C-08C8-4001-92A8-FED155C3B4FE	55	Female	STAGE III		2076	-20328	0	Not Hispanic Or Latino	11/7/13	No	C74.0	8370/3	C74.0	Yes	No		N1	T2	Tumor Free	Yes	No	White	Yes		Yes	0:LIVING	68.25130684	0:ALIVE OR DEAD TUMOR FREE	68.25130684	0:DiseaseFree	68.25130684	0:CENSORED	68.25130684	EUR
+TCGA-OR-A5KX	ACC	ACC	33C02ECE-911B-4F45-B410-9DF07E9B189E	25	Female	STAGE III		1364	-9298	0	Not Hispanic Or Latino	11/6/13	No	C74.0	8370/3	C74.0	Yes	Yes		N1	T2	With Tumor	Yes	No	White	No		Yes	0:LIVING	44.84334418	0:ALIVE OR DEAD TUMOR FREE	44.84334418			1:PROGRESSION	2.038333827	EUR
+TCGA-OR-A5KY	ACC	ACC	5F461197-15ED-43CF-9331-9E0EFC4622A4	23	Female	STAGE IV			-8745	0	Not Hispanic Or Latino	11/5/13	No	C74.0	8370/3	C74.0	Yes	Yes		N1	T4	With Tumor	Yes	No	White	No		Yes	1:DECEASED	12.85465365	1:DEAD WITH TUMOR	12.85465365			1:PROGRESSION	5.851990663	EUR
+TCGA-OR-A5KZ	ACC	ACC	99F86B57-3894-45C5-BFBE-C757C69A3050	42	Male	STAGE II			-15594	0	Not Hispanic Or Latino	11/7/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	With Tumor		No	White	No		Yes	1:DECEASED	4.109544005	1:DEAD WITH TUMOR	4.109544005			1:PROGRESSION	1.183548673	EUR
+TCGA-OR-A5L1		ACC	3ED33021-8EFD-420F-9A0B-E7420B586BCD	37	Female	STAGE II		1781	-13840	0	Not Hispanic Or Latino	6/27/14	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	With Tumor	No	No	White	No		No	0:LIVING	58.55278298	0:ALIVE OR DEAD TUMOR FREE	58.55278298	1:Recurred/Progressed	22.52030115	1:PROGRESSION	22.52030115	EUR
+TCGA-OR-A5L2		ACC	A26B6F97-FD7E-4B96-BDF5-9DF4F9233726	83	Female	STAGE II			-30535	0	Not Hispanic Or Latino	6/26/14	No	C74.0	8370/1	C74.0	Yes	No		N0	T2	Tumor Free	No	No	White	No		No	1:DECEASED	60.88700398	0:ALIVE OR DEAD TUMOR FREE	60.88700398	0:DiseaseFree	60.88700398	0:CENSORED	60.88700398	EUR
+TCGA-OR-A5L3	ACC	ACC	A9A57127-94D3-425F-A4C5-5CBCF24A9A35	67	Female	STAGE I		4628	-24763	0	Not Hispanic Or Latino	11/5/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T1	Tumor Free		No	White	No		Yes	0:LIVING	152.1517572	0:ALIVE OR DEAD TUMOR FREE	152.1517572	0:DiseaseFree	152.1517572	0:CENSORED	152.1517572	EUR
+TCGA-OR-A5L4	ACC	ACC	905368C2-BA60-4DDA-B32D-A51A203B5E4D	48	Female	STAGE III		967	-17819	0	Not Hispanic Or Latino	4/2/14	No	C74.0	8370/3	C74.0	Yes	No		N0	T4	Tumor Free		No	White	No		Yes	0:LIVING	31.79143242	0:ALIVE OR DEAD TUMOR FREE	31.79143242	0:DiseaseFree	31.79143242	0:CENSORED	31.79143242	EUR
+TCGA-OR-A5L5	ACC	ACC	2F04E760-8A64-49F2-A1D6-3D390604745C	77	Female	STAGE I		1317	-28270	0	Not Hispanic Or Latino	11/6/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T1	Tumor Free	No	Yes	White	No		Yes	0:LIVING	43.29815564	0:ALIVE OR DEAD TUMOR FREE	43.29815564	0:DiseaseFree	43.29815564	0:CENSORED	43.29815564	EUR
+TCGA-OR-A5L6	ACC	ACC	F13A3D5E-7F8E-4ACB-AD46-F6380A9443E8	60	Male	STAGE II		861	-22057	0	Not Hispanic Or Latino	11/5/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free		No	White	No		Yes	0:LIVING	28.30653911	0:ALIVE OR DEAD TUMOR FREE	28.30653911	0:DiseaseFree	28.30653911	0:CENSORED	28.30653911	EUR
+TCGA-OR-A5L8	ACC	ACC	5E086192-AB74-4AA3-BF6B-B34AB19995DB	36	Female	STAGE II		885	-13472	0	Not Hispanic Or Latino	11/4/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No	White	No		Yes	0:LIVING	29.09557156	0:ALIVE OR DEAD TUMOR FREE	29.09557156	0:DiseaseFree	29.09557156	0:CENSORED	29.09557156	EUR
+TCGA-OR-A5L9	ACC	ACC	C6312DE5-DD56-4025-80D1-DBDD8568D047	53	Female	STAGE II		871	-19526	0	Not Hispanic Or Latino	11/4/13	No	C74.0	8370/1	C74.0	Yes	No		N0	T2	Tumor Free	Yes	No	White	No		Yes	0:LIVING	28.63530263	0:ALIVE OR DEAD TUMOR FREE	28.63530263	0:DiseaseFree	28.63530263	0:CENSORED	28.63530263	EUR
+TCGA-OR-A5LA	ACC	ACC	E93CA89F-CA48-43CA-BF1C-ADC7491C0FE5	52	Female	STAGE II		719	-19242	0	Not Hispanic Or Latino	11/6/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No	White	No		Yes	0:LIVING	23.63809712	0:ALIVE OR DEAD TUMOR FREE	23.63809712	0:DiseaseFree	23.63809712	0:CENSORED	23.63809712	EUR
+TCGA-OR-A5LB	ACC	ACC	FB504E55-1859-48EE-AEC7-A3FCB082785E	59	Male	STAGE IV			-21565	0	Not Hispanic Or Latino	11/4/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T4	With Tumor	No	Yes	White	Yes		Yes	1:DECEASED	39.58312786	1:DEAD WITH TUMOR	39.58312786			1:PROGRESSION	20.0874511	EUR
+TCGA-OR-A5LC	ACC	ACC	F8954241-E541-406F-A09D-C3C987473732	71	Female	STAGE IV			-26084	0	Not Hispanic Or Latino	11/4/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T4	With Tumor		No	White	No		Yes	1:DECEASED	5.227339974	1:DEAD WITH TUMOR	5.227339974			1:PROGRESSION	1.643817602	EUR
+TCGA-OR-A5LD	ACC	ACC	D885B720-E813-4828-A731-B3CDCBD20687	52	Male	STAGE III			-19111	0	Not Hispanic Or Latino	11/7/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T4	With Tumor	No	No	White	No		Yes	1:DECEASED	39.35299339	1:DEAD WITH TUMOR	39.35299339			1:PROGRESSION	14.59710031	EUR
+TCGA-OR-A5LE	ACC	ACC	C4DD9501-C193-45FB-8535-A9D901520BDD	14	Male	STAGE II			-5383	0	Not Hispanic Or Latino	11/4/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	With Tumor	Yes	No	White	No		Yes	1:DECEASED	21.76414505	1:DEAD WITH TUMOR	21.76414505			1:PROGRESSION	8.712233291	EUR
+TCGA-OR-A5LF		ACC	7E61E3B8-C617-4A5F-AFDF-689521C9A670	74	Female	STAGE III			-27179	0	Not Hispanic Or Latino	6/27/14	No	C74.0	8370/3	C74.0	Yes	No		N0	T3	Tumor Free	No	No	White	No		No	1:DECEASED	14.62997666	0:ALIVE OR DEAD TUMOR FREE	14.62997666	0:DiseaseFree	14.62997666	0:CENSORED	14.62997666	EUR
+TCGA-OR-A5LG	ACC	ACC	FAD4B7E6-510C-4968-83DF-3140ED5A0549	46	Male	STAGE III		1589	-16875	0	Not Hispanic Or Latino	11/5/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T3	With Tumor	Yes	No	White	No		Yes	0:LIVING	52.24052339	0:ALIVE OR DEAD TUMOR FREE	52.24052339	1:Recurred/Progressed	45.79675839	1:PROGRESSION	45.79675839	EUR
+TCGA-OR-A5LH	ACC	ACC	CF327482-199B-4604-AC19-C8B68D91C5D9	36	Female	STAGE II			-13182	0	Not Hispanic Or Latino	11/5/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	With Tumor	No	No	White	No		Yes	1:DECEASED	78.41009962	1:DEAD WITH TUMOR	78.41009962			1:PROGRESSION	78.41009962	EUR
+TCGA-OR-A5LI		ACC	EC9C3EFE-AF61-4DEB-B047-DCF7EE735FD2	42	Female	STAGE IV			-15536	0	Not Hispanic Or Latino	6/26/14	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T4	With Tumor	No	No	White	No		No	1:DECEASED	14.33408949	1:DEAD WITH TUMOR	14.33408949			1:PROGRESSION	2.005457474	EUR
+TCGA-OR-A5LJ	ACC	ACC	FC83AB27-929E-4AD4-BA18-ABB0694F1E43	54	Female	STAGE IV			-20069	0	Not Hispanic Or Latino	11/7/13	No	C74.0	8370/3	C74.0	Yes	Yes		N1	T2	With Tumor	Yes	No	White	No		Yes	1:DECEASED	36.328369	1:DEAD WITH TUMOR	36.328369			1:PROGRESSION	3.2218825	EUR
+TCGA-OR-A5LK	ACC	ACC	9C87DCEE-D422-4DF1-82E1-3FA201473E31	62	Male	STAGE II		2740	-22919	0		11/27/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No		No		Yes	0:LIVING	90.08120459	0:ALIVE OR DEAD TUMOR FREE	90.08120459	0:DiseaseFree	90.08120459	0:CENSORED	90.08120459	EUR
+TCGA-OR-A5LL	ACC	ACC	0304B12D-7640-4150-A581-2EEA2B1F2AD5	75	Female	STAGE II			-27607	0		11/27/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	With Tumor	Yes	No		No		Yes	1:DECEASED	53.02955584	1:DEAD WITH TUMOR	53.02955584	1:Recurred/Progressed	7.002662985	1:PROGRESSION	7.002662985	EUR
+TCGA-OR-A5LM	ACC	ACC	E612EF6E-F3F2-44BE-AB15-8E4095687CD6	23	Male	STAGE II		1858	-8735	0		11/27/13	No	C74.0	8370/3	C74.0	Yes			N0	T2	Tumor Free	Yes	No		No		Yes	0:LIVING	61.08426209	0:ALIVE OR DEAD TUMOR FREE	61.08426209	0:DiseaseFree	61.08426209	0:CENSORED	61.08426209	EUR
+TCGA-OR-A5LN	ACC	ACC	56CDBBA2-327E-4ACD-A1EB-0F313A77834F	31	Female	STAGE II		2342	-11414	0		11/27/13	No	C74.0	8370/3	C74.0	Yes			N0	T2	Tumor Free	Yes	No		No		Yes	0:LIVING	76.99641648	0:ALIVE OR DEAD TUMOR FREE	76.99641648	0:DiseaseFree	76.99641648	0:CENSORED	76.99641648	AFR_ADMIX
+TCGA-OR-A5LO	ACC	ACC	1D5602A7-72E7-4DC6-B2DB-2F778FCBF475	61	Female	STAGE II		2102	-22370	0		11/27/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T2	With Tumor	Yes	No		No		Yes	1:DECEASED	79.06762666	1:DEAD WITH TUMOR	79.06762666	1:Recurred/Progressed	5.030081862	1:PROGRESSION	5.030081862	EUR
+TCGA-OR-A5LP	ACC	ACC	DFEF51C8-6050-4EBB-B25C-E74919397244	37	Female	STAGE II		1857	-13574	0		11/27/13	No	C74.0	8370/3	C74.0	Yes			N0	T2	Tumor Free	Yes	No		No		Yes	0:LIVING	61.05138574	0:ALIVE OR DEAD TUMOR FREE	61.05138574	0:DiseaseFree	61.05138574	0:CENSORED	61.05138574	EUR
+TCGA-OR-A5LR	ACC	ACC	723EB689-7B4F-4758-BCDF-426B12508935	30	Female	STAGE II		853	-11261	0		11/26/13	No	C74.0	8370/3	C74.0	Yes			N0	T2	Tumor Free	No	No		No		Yes	0:LIVING	28.04352829	0:ALIVE OR DEAD TUMOR FREE	28.04352829	0:DiseaseFree	28.04352829	0:CENSORED	28.04352829	EUR
+TCGA-OR-A5LS	ACC	ACC	F63946EC-DDCB-469A-8F5E-74366B7F419B	34	Female	STAGE II		1096	-12663	0		11/27/13	No	C74.0	8370/3	C74.0	Yes			N0	T2	Tumor Free	No	No		No		Yes	0:LIVING	36.03248184	0:ALIVE OR DEAD TUMOR FREE	36.03248184	0:DiseaseFree	36.03248184	0:CENSORED	36.03248184	EUR
+TCGA-OR-A5LT	ACC	ACC	15FB07AE-101C-4553-891D-539CEE89A5E9	57	Male	STAGE III		549	-21032	0		11/27/13	No	C74.0	8370/3	C74.0	Yes			N0	T3	Tumor Free	Yes	No		No		Yes	0:LIVING	18.04911727	0:ALIVE OR DEAD TUMOR FREE	18.04911727	0:DiseaseFree	18.04911727	0:CENSORED	18.04911727	EUR
+TCGA-OU-A5PI	ACC	ACC	A5BE4E42-CB6C-4E67-8547-45DBD058BB95	53	Female	STAGE IV		1171	-19492	0	Not Hispanic Or Latino	7/16/13	No	C74.0	8370/3	C74.0	Yes	Yes		N1	T2	With Tumor	Yes	No	White	No		Yes	0:LIVING	38.49820824	0:ALIVE OR DEAD TUMOR FREE	38.49820824			1:PROGRESSION	11.53959957	EUR
+TCGA-P6-A5OF		ACC	888A7158-2319-4563-849B-573705C72AB7	55	Female	STAGE III			-20106	0	Not Hispanic Or Latino	8/15/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T4	With Tumor	No	No	White	No		No	1:DECEASED	6.805404872	1:DEAD WITH TUMOR	6.805404872			1:PROGRESSION	4.701318342	EUR
+TCGA-OR-A5OG		ACC	0824B246-9FA2-4A8B-AD4C-1FFC7731BF7D	45	Female	STAGE IV			-16659	0	Not Hispanic Or Latino	8/15/13	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T4	With Tumor	Yes	Yes	White	No		No									EUR
+TCGA-P6-A5OH		ACC	92B67CA9-6C82-463E-9CC5-685A1D02EA3E	59	Female	STAGE IV			-21627	0	Not Hispanic Or Latino	3/25/14	No	C74.0	8370/3	C74.0	Yes	No		N0	T4	With Tumor		No	White	No		No	1:DECEASED	0	1:DEAD WITH TUMOR	0			1:PROGRESSION	0	EUR
+TCGA-PA-A5YG	ACC	ACC	8B3649E3-16E2-4044-8AB8-F4D28A87E513	51	Male	STAGE II		756	-18926	0	Not Hispanic Or Latino	4/7/14	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No	White	No		Yes	0:LIVING	24.85452214	0:ALIVE OR DEAD TUMOR FREE	24.85452214	0:DiseaseFree	24.85452214	0:CENSORED	24.85452214	EUR
+TCGA-PK-A5H8		ACC	42EF34CC-FFB4-432C-82BB-7AA56639FF51	42	Male	STAGE II		3623	-15373	0	Not Hispanic Or Latino	9/16/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No	White	No		No	0:LIVING	119.1110234	0:ALIVE OR DEAD TUMOR FREE	119.1110234	0:DiseaseFree	119.1110234	0:CENSORED	119.1110234	EUR
+TCGA-PK-A5H9	ACC	ACC	83E7B9F8-04A4-440F-AAFC-7A8E9DDFF284	27	Female	STAGE II		616	-10173	0	Not Hispanic Or Latino	9/16/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T2	Tumor Free	No	No	Asian	No		Yes	0:LIVING	20.25183286	0:ALIVE OR DEAD TUMOR FREE	20.25183286	0:DiseaseFree	20.25183286	0:CENSORED	20.25183286	EAS
+TCGA-PK-A5HA	ACC	ACC	5EB5EE1F-ECFF-4427-B717-B91380C043AE	63	Male	STAGE I		1201	-23345	0		9/16/13	No	C74.0	8370/3	C74.0	Yes	No		N0	T1	Tumor Free	Yes	No		No		Yes	0:LIVING	39.4844988	0:ALIVE OR DEAD TUMOR FREE	39.4844988	0:DiseaseFree	39.4844988	0:CENSORED	39.4844988	EUR
+TCGA-PK-A5HB	ACC	ACC	9A8EA017-0152-48B2-ACCB-D040DEB1C6B6	63	Male			1293	-23293	0		9/16/13	No	C74.0	8370/3	C74.0	Yes	Yes				With Tumor	Yes	Yes		Yes		Yes	0:LIVING	42.50912319	0:ALIVE OR DEAD TUMOR FREE	42.50912319			1:PROGRESSION	7.002662985	EUR
+TCGA-PK-A5HC		ACC	891B7A67-0A01-45F0-8A32-4A1B3E888F6C	44	Female	STAGE III		679	-16182	0	Not Hispanic Or Latino	3/13/14	No	C74.0	8370/3	C74.0	Yes	Yes		N0	T4	With Tumor	Yes	No	Asian	No		No	0:LIVING	22.32304304	0:ALIVE OR DEAD TUMOR FREE	22.32304304	1:Recurred/Progressed	4.306802117	1:PROGRESSION	4.306802117	EAS

acc_tcga_pan_can_atlas_2018/data_clinical_sample.txt ADDED Viewed

	@@ -0,0 +1,97 @@

+#Patient Identifier	Sample Identifier	Oncotree Code	Cancer Type	Cancer Type Detailed	Tumor Type	Neoplasm Histologic Grade	Tissue Prospective Collection Indicator	Tissue Retrospective Collection Indicator	Tissue Source Site Code	Tumor Disease Anatomic Site	Aneuploidy Score	Sample Type	MSI MANTIS Score	MSIsensor Score	Somatic Status	TMB (nonsynonymous)	Tissue Source Site	Tumor Break Load
+#Identifier to uniquely specify a patient.	A unique sample identifier.	Oncotree Code	Cancer Type	Cancer Type Detailed	Tumor Type	Numeric value to express the degree of abnormality of cancer cells, a measure of differentiation and aggressiveness.	Tissue prospective collection indicator.	Tissue retrospective collection indicator.	Tissue Source Site Code	Text term that describes the anatomic site of the tumor or disease.	Aneuploidy Score	The type of sample (i.e., normal, primary, met, recurrence).	MSI Score reported by MANTIS. The suggested thresholds are MSI: >0.6, Indeterminate: 0.4-0.6 and MSS: <0.4.	MSI Score reported by MSIsensor. The suggested thresholds are MSI: >10, Indeterminate: 4-10 and MSS: <10.	Somatic Status	TMB (nonsynonymous)	A Tissue Source Site collects samples (tissue, cell, or blood) and cliincal metadata which are then sent to tha Biospecimen Core Resource.	The sum of unbalanced somatic chromosomal breaks per tumor sample (Lakbir et al., Eur J Cancer 2022; Data from new manuscript in progress)
+#STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	NUMBER	STRING	NUMBER	NUMBER	STRING	NUMBER	STRING	NUMBER
+#1	1	1	1	1	1	1	1	1	1	1	1	9	9	9	1	1	1	1
+PATIENT_ID	SAMPLE_ID	ONCOTREE_CODE	CANCER_TYPE	CANCER_TYPE_DETAILED	TUMOR_TYPE	GRADE	TISSUE_PROSPECTIVE_COLLECTION_INDICATOR	TISSUE_RETROSPECTIVE_COLLECTION_INDICATOR	TISSUE_SOURCE_SITE_CODE	TUMOR_TISSUE_SITE	ANEUPLOIDY_SCORE	SAMPLE_TYPE	MSI_SCORE_MANTIS	MSI_SENSOR_SCORE	SOMATIC_STATUS	TMB_NONSYNONYMOUS	TISSUE_SOURCE_SITE	TBL_SCORE
+TCGA-OR-A5J1	TCGA-OR-A5J1-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	2	Primary	0.275	0	Matched	0.8	University of Michigan	421
+TCGA-OR-A5J2	TCGA-OR-A5J2-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	10	Primary	0.3236	1.57	Matched	0.966666667	University of Michigan	68
+TCGA-OR-A5J3	TCGA-OR-A5J3-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	12	Primary	0.3434	1.82	Matched	0.333333333	University of Michigan	7
+TCGA-OR-A5J4	TCGA-OR-A5J4-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	17	Primary	0.2997	0.45	Matched	3.866666667	University of Michigan	474
+TCGA-OR-A5J5	TCGA-OR-A5J5-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	33	Primary	0.5224	5.38	Matched	11.86666667	University of Michigan	36
+TCGA-OR-A5J6	TCGA-OR-A5J6-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	22	Primary	0.2894	0	Matched	1	University of Michigan	12
+TCGA-OR-A5J7	TCGA-OR-A5J7-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	24	Primary	0.294	0.79	Matched	1.6	University of Michigan	384
+TCGA-OR-A5J8	TCGA-OR-A5J8-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	7	Primary	0.3203	0.64	Matched	2.966666667	University of Michigan	186
+TCGA-OR-A5J9	TCGA-OR-A5J9-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	27	Primary	0.3173	0.9	Matched	1.033333333	University of Michigan	106
+TCGA-OR-A5JA	TCGA-OR-A5JA-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	33	Primary	0.307	0.72	Matched	15.76666667	University of Michigan	162
+TCGA-OR-A5JB	TCGA-OR-A5JB-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	13	Primary	0.2905	0.35	Matched	9.4	University of Michigan	84
+TCGA-OR-A5JC	TCGA-OR-A5JC-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	28	Primary	0.2978	0.56	Matched	0.9	University of Michigan	172
+TCGA-OR-A5JD	TCGA-OR-A5JD-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Oncocytic Type	NA	No	Yes	OR	Adrenal Gland	39	Primary	0.3003	0.46	Matched	0.866666667	University of Michigan	4
+TCGA-OR-A5JE	TCGA-OR-A5JE-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	21	Primary	0.2921	0	Matched	1.733333333	University of Michigan	177
+TCGA-OR-A5JF	TCGA-OR-A5JF-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	18	Primary	0.2854	0.91	Matched	2.2	University of Michigan	38
+TCGA-OR-A5JG	TCGA-OR-A5JG-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	39	Primary	0.3206	1.45	Matched	0.9	University of Michigan	23
+TCGA-OR-A5JH	TCGA-OR-A5JH-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Oncocytic Type	NA	No	Yes	OR	Adrenal Gland	19	Primary	0.2863	0.01	Matched	0.166666667	University of Michigan	22
+TCGA-OR-A5JI	TCGA-OR-A5JI-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	22	Primary	0.2816	0.01	Matched	0.4	University of Michigan	0
+TCGA-OR-A5JJ	TCGA-OR-A5JJ-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	17	Primary	0.3122	1	Matched	0.6	University of Michigan	31
+TCGA-OR-A5JK	TCGA-OR-A5JK-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	20	Primary	0.2953	0.49	Matched	0.866666667	University of Michigan	63
+TCGA-OR-A5JL	TCGA-OR-A5JL-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	14	Primary	0.3073	0.73	Matched	0.366666667	University of Michigan	19
+TCGA-OR-A5JM	TCGA-OR-A5JM-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	15	Primary	0.2903	0.21	Matched	2.066666667	University of Michigan	263
+TCGA-OR-A5JO	TCGA-OR-A5JO-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	0	Primary	0.2733	0.01	Matched	0.433333333	University of Michigan	1
+TCGA-OR-A5JP	TCGA-OR-A5JP-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	18	Primary	0.2717	0.2	Matched	2.166666667	University of Michigan	132
+TCGA-OR-A5JQ	TCGA-OR-A5JQ-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Myxoid Type	NA	No	Yes	OR	Adrenal Gland	17	Primary	0.2938	0.25	Matched	0.2	University of Michigan	10
+TCGA-OR-A5JR	TCGA-OR-A5JR-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	17	Primary	0.302	0.88	Matched	0.133333333	University of Michigan	46
+TCGA-OR-A5JS	TCGA-OR-A5JS-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	31	Primary	0.2867	0.22	Matched	1	University of Michigan	146
+TCGA-OR-A5JT	TCGA-OR-A5JT-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	37	Primary	0.3001	1.11	Matched	0.833333333	University of Michigan	59
+TCGA-OR-A5JU	TCGA-OR-A5JU-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	2	Primary	0.2846	0	Matched	0.8	University of Michigan	27
+TCGA-OR-A5JV	TCGA-OR-A5JV-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	31	Primary	0.3109	0	Matched	0.833333333	University of Michigan	88
+TCGA-OR-A5JW	TCGA-OR-A5JW-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	17	Primary	0.2811	0.64	Matched	0.9	University of Michigan	28
+TCGA-OR-A5JX	TCGA-OR-A5JX-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	25	Primary	0.2803	0.52	Matched	1.1	University of Michigan	149
+TCGA-OR-A5JY	TCGA-OR-A5JY-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	14	Primary	0.2929	0.49	Matched	2.333333333	University of Michigan	643
+TCGA-OR-A5JZ	TCGA-OR-A5JZ-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	9	Primary	0.3351	2.21	Matched	0.5	University of Michigan	66
+TCGA-OR-A5K0	TCGA-OR-A5K0-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	4	Primary	0.2871	0.29	Matched	1.666666667	University of Michigan	123
+TCGA-OR-A5K1	TCGA-OR-A5K1-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	12	Primary	0.3211	0.97	Matched	0.433333333	University of Michigan	6
+TCGA-OR-A5K2	TCGA-OR-A5K2-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	16	Primary	0.2649	0.03	Matched	1.466666667	University of Michigan	170
+TCGA-OR-A5K3	TCGA-OR-A5K3-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Oncocytic Type	NA	No	Yes	OR	Adrenal Gland	13	Primary	0.3292	1.36	Matched	0.5	University of Michigan	10
+TCGA-OR-A5K4	TCGA-OR-A5K4-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	12	Primary	0.3259	2.41	Matched	7.1	University of Michigan	20
+TCGA-OR-A5K5	TCGA-OR-A5K5-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	19	Primary	0.2862	0.19	Matched	3.833333333	University of Michigan	635
+TCGA-OR-A5K6	TCGA-OR-A5K6-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	Yes	No	OR	Adrenal Gland	3	Primary	0.2782	0.04	Matched	0.833333333	University of Michigan	75
+TCGA-OR-A5K8	TCGA-OR-A5K8-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	Yes	No	OR	Adrenal Gland	20	Primary	0.3147	1.19	Matched	0.833333333	University of Michigan	27
+TCGA-OR-A5K9	TCGA-OR-A5K9-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	17	Primary	0.2939	0.75	Matched	3.8	University of Michigan	172
+TCGA-OR-A5KB	TCGA-OR-A5KB-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	20	Primary	0.2825	0.07	Matched	62.06666667	University of Michigan	207
+TCGA-OR-A5KO	TCGA-OR-A5KO-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	18	Primary	0.3134	1.25	Matched	0.966666667	University of Michigan	191
+TCGA-OR-A5KP	TCGA-OR-A5KP-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	21	Primary	0.2917	0.04	Matched	2.066666667	University of Michigan	73
+TCGA-OR-A5KQ	TCGA-OR-A5KQ-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	1	Primary	0.2774	0	Matched	0.333333333	University of Michigan	6
+TCGA-OR-A5KS	TCGA-OR-A5KS-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	31	Primary	0.308	1.09	Matched	0.633333333	University of Michigan	198
+TCGA-OR-A5KT	TCGA-OR-A5KT-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	1	Primary	0.2777	0	Matched	0.833333333	University of Michigan	142
+TCGA-OR-A5KU	TCGA-OR-A5KU-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	32	Primary	0.2992	0.51	Matched	0.633333333	University of Michigan	24
+TCGA-OR-A5KV	TCGA-OR-A5KV-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	0	Primary	0.2864	0.17	Matched	0.633333333	University of Michigan	35
+TCGA-OR-A5KW	TCGA-OR-A5KW-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	14	Primary	0.3219	1.77	Matched	0.7	University of Michigan	76
+TCGA-OR-A5KX	TCGA-OR-A5KX-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	11	Primary	0.2824	0.17	Matched	1.2	University of Michigan	307
+TCGA-OR-A5KY	TCGA-OR-A5KY-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	16	Primary	0.3164	0.93	Matched	0.9	University of Michigan	152
+TCGA-OR-A5KZ	TCGA-OR-A5KZ-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	16	Primary	0.3314	1.69	Matched	0.933333333	University of Michigan	80
+TCGA-OR-A5L1	TCGA-OR-A5L1-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	31	Primary	0.3036	0.87	Matched	0.433333333	University of Michigan	22
+TCGA-OR-A5L2	TCGA-OR-A5L2-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	21	Primary	0.299	0.2	Matched	4.333333333	University of Michigan	317
+TCGA-OR-A5L3	TCGA-OR-A5L3-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	1	Primary	0.2855	0	Matched	0.666666667	University of Michigan	16
+TCGA-OR-A5L4	TCGA-OR-A5L4-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	37	Primary	0.3054	1.29	Matched	0.766666667	University of Michigan	14
+TCGA-OR-A5L5	TCGA-OR-A5L5-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	9	Primary	0.3006	0.22	Matched	0.3	University of Michigan	5
+TCGA-OR-A5L6	TCGA-OR-A5L6-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	21	Primary	0.332	2.35	Matched	1.233333333	University of Michigan	48
+TCGA-OR-A5L8	TCGA-OR-A5L8-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	29	Primary	0.3139	0.62	Matched	0.533333333	University of Michigan	7
+TCGA-OR-A5L9	TCGA-OR-A5L9-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	10	Primary	0.3164	0.66	Matched	0.233333333	University of Michigan	3
+TCGA-OR-A5LA	TCGA-OR-A5LA-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	39	Primary	0.2887	0.07	Matched	0.233333333	University of Michigan	2
+TCGA-OR-A5LB	TCGA-OR-A5LB-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	18	Primary	0.5276	5.16	Matched	7.533333333	University of Michigan	46
+TCGA-OR-A5LC	TCGA-OR-A5LC-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	26	Primary	0.293	0.4	Matched	1.466666667	University of Michigan	68
+TCGA-OR-A5LD	TCGA-OR-A5LD-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	16	Primary	0.2901	0.05	Matched	1.8	University of Michigan	112
+TCGA-OR-A5LE	TCGA-OR-A5LE-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	7	Primary	0.2826	0.05	Matched	0.733333333	University of Michigan	70
+TCGA-OR-A5LF	TCGA-OR-A5LF-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	34	Primary	0.3097	0.65	Matched	0.7	University of Michigan	111
+TCGA-OR-A5LG	TCGA-OR-A5LG-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	4	Primary	0.2858	0.22	Matched	0.6	University of Michigan	94
+TCGA-OR-A5LH	TCGA-OR-A5LH-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	8	Primary	0.3172	1.11	Matched	0.3	University of Michigan	14
+TCGA-OR-A5LI	TCGA-OR-A5LI-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	18	Primary	0.282	0.05	Matched	1.666666667	University of Michigan	512
+TCGA-OR-A5LJ	TCGA-OR-A5LJ-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	15	Primary	0.5156	6.52	Matched	13.46666667	University of Michigan	30
+TCGA-OR-A5LK	TCGA-OR-A5LK-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Oncocytic Type	NA	No	Yes	OR	Adrenal Gland	39	Primary	0.2888	0.24	Matched	1.333333333	University of Michigan	22
+TCGA-OR-A5LL	TCGA-OR-A5LL-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	10	Primary	0.2918	0.08	Matched	1.7	University of Michigan	213
+TCGA-OR-A5LM	TCGA-OR-A5LM-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	32	Primary	0.3249	1.28	Matched	0.8	University of Michigan	105
+TCGA-OR-A5LN	TCGA-OR-A5LN-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	26	Primary	0.2884	0	Matched	0.366666667	University of Michigan	9
+TCGA-OR-A5LO	TCGA-OR-A5LO-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	33	Primary	0.3213	1.44	Matched	2.066666667	University of Michigan	213
+TCGA-OR-A5LP	TCGA-OR-A5LP-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	12	Primary	0.3038	0.58	Matched	0.6	University of Michigan	3
+TCGA-OR-A5LR	TCGA-OR-A5LR-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	10	Primary	0.3141	1.33	Matched	0.366666667	University of Michigan	2
+TCGA-OR-A5LS	TCGA-OR-A5LS-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	36	Primary	0.313	0.88	Matched	0.366666667	University of Michigan	43
+TCGA-OR-A5LT	TCGA-OR-A5LT-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OR	Adrenal Gland	31	Primary	0.3294	1.29	Matched	0.733333333	University of Michigan	73
+TCGA-OU-A5PI	TCGA-OU-A5PI-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	OU	Adrenal Gland	19	Primary	0.3042	0.53	Matched	0.933333333	Roswell Park	111
+TCGA-P6-A5OF	TCGA-P6-A5OF-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	P6	Adrenal Gland		Primary	0.3193	0.87	Matched	0.933333333	Translational Genomics Research Institute
+TCGA-OR-A5OG	TCGA-OR-A5OG-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	P6	Adrenal Gland		Primary			Matched	NA	University of Michigan
+TCGA-P6-A5OH	TCGA-P6-A5OH-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	P6	Adrenal Gland	12	Primary	0.2952	0.02	Matched	4.2	Translational Genomics Research Institute	246
+TCGA-PA-A5YG	TCGA-PA-A5YG-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	Yes	No	PA	Adrenal Gland	12	Primary	0.2987	0.57	Matched	0.333333333	University of Minnesota	8
+TCGA-PK-A5H8	TCGA-PK-A5H8-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	PK	Adrenal Gland		Primary	0.3139	1.13	Matched	0.666666667	University Health Network
+TCGA-PK-A5H9	TCGA-PK-A5H9-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	PK	Adrenal Gland	0	Primary	0.2757	0	Matched	0.5	University Health Network	23
+TCGA-PK-A5HA	TCGA-PK-A5HA-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	PK	Adrenal Gland	11	Primary	0.3022	0.39	Matched	1.6	University Health Network	57
+TCGA-PK-A5HB	TCGA-PK-A5HB-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	PK	Adrenal Gland	13	Primary	0.4705	4.68	Matched	32.83333333	University Health Network	51
+TCGA-PK-A5HC	TCGA-PK-A5HC-01	ACC	Adrenocortical Carcinoma	Adrenocortical Carcinoma	Adrenocortical Carcinoma, Usual Type	NA	No	Yes	PK	Adrenal Gland	21	Primary	0.2995	0.56	Matched	1.833333333	University Health Network	232

acc_tcga_pan_can_atlas_2018/data_cna.txt ADDED Viewed

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acc_tcga_pan_can_atlas_2018/data_cna_hg19.seg ADDED Viewed

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acc_tcga_pan_can_atlas_2018/data_gene_panel_matrix.txt ADDED Viewed

	@@ -0,0 +1,93 @@

+SAMPLE_ID	mutations	gistic	structural_variants
+TCGA-OR-A5J1-01	WXS	WXS	WXS
+TCGA-OR-A5J2-01	WXS	WXS	WXS
+TCGA-OR-A5J3-01	WXS	WXS	WXS
+TCGA-OR-A5J4-01	WXS	WXS	WXS
+TCGA-OR-A5J5-01	WXS	WXS	WXS
+TCGA-OR-A5J6-01	WXS	WXS	WXS
+TCGA-OR-A5J7-01	WXS	WXS	WXS
+TCGA-OR-A5J8-01	WXS	WXS	WXS
+TCGA-OR-A5J9-01	WXS	WXS	WXS
+TCGA-OR-A5JA-01	WXS	WXS	WXS
+TCGA-OR-A5JB-01	WXS	WXS	WXS
+TCGA-OR-A5JC-01	WXS	WXS	WXS
+TCGA-OR-A5JD-01	WXS	WXS	WXS
+TCGA-OR-A5JE-01	WXS	WXS	WXS
+TCGA-OR-A5JF-01	WXS	WXS	WXS
+TCGA-OR-A5JG-01	WXS	WXS	WXS
+TCGA-OR-A5JH-01	WXS	WXS	WXS
+TCGA-OR-A5JI-01	WXS	WXS	WXS
+TCGA-OR-A5JJ-01	WXS	WXS	WXS
+TCGA-OR-A5JK-01	WXS	WXS	WXS
+TCGA-OR-A5JL-01	WXS	WXS	WXS
+TCGA-OR-A5JM-01	WXS	WXS	WXS
+TCGA-OR-A5JO-01	WXS	WXS	WXS
+TCGA-OR-A5JP-01	WXS	WXS	WXS
+TCGA-OR-A5JQ-01	WXS	WXS	WXS
+TCGA-OR-A5JR-01	WXS	WXS	WXS
+TCGA-OR-A5JS-01	WXS	WXS	WXS
+TCGA-OR-A5JT-01	WXS	WXS	WXS
+TCGA-OR-A5JU-01	WXS	WXS	WXS
+TCGA-OR-A5JV-01	WXS	WXS	WXS
+TCGA-OR-A5JW-01	WXS	WXS	WXS
+TCGA-OR-A5JX-01	WXS	WXS	WXS
+TCGA-OR-A5JY-01	WXS	WXS	WXS
+TCGA-OR-A5JZ-01	WXS	WXS	WXS
+TCGA-OR-A5K0-01	WXS	WXS	WXS
+TCGA-OR-A5K1-01	WXS	WXS	WXS
+TCGA-OR-A5K2-01	WXS	WXS	WXS
+TCGA-OR-A5K3-01	WXS	WXS	WXS
+TCGA-OR-A5K4-01	WXS	WXS	WXS
+TCGA-OR-A5K5-01	WXS	WXS	WXS
+TCGA-OR-A5K6-01	WXS	WXS	WXS
+TCGA-OR-A5K8-01	WXS	WXS	WXS
+TCGA-OR-A5K9-01	WXS	WXS	WXS
+TCGA-OR-A5KB-01	WXS	WXS	WXS
+TCGA-OR-A5KO-01	WXS	WXS	WXS
+TCGA-OR-A5KP-01	WXS	WXS	WXS
+TCGA-OR-A5KQ-01	WXS	WXS	WXS
+TCGA-OR-A5KS-01	WXS	WXS	WXS
+TCGA-OR-A5KT-01	WXS	WXS	WXS
+TCGA-OR-A5KU-01	WXS	WXS	WXS
+TCGA-OR-A5KV-01	WXS	WXS	WXS
+TCGA-OR-A5KW-01	WXS	WXS	WXS
+TCGA-OR-A5KX-01	WXS	WXS	WXS
+TCGA-OR-A5KY-01	WXS	WXS	WXS
+TCGA-OR-A5KZ-01	WXS	WXS	WXS
+TCGA-OR-A5L1-01	WXS	WXS	WXS
+TCGA-OR-A5L2-01	WXS	WXS	WXS
+TCGA-OR-A5L3-01	WXS	WXS	WXS
+TCGA-OR-A5L4-01	WXS	WXS	WXS
+TCGA-OR-A5L5-01	WXS	WXS	WXS
+TCGA-OR-A5L6-01	WXS	WXS	WXS
+TCGA-OR-A5L8-01	WXS	WXS	WXS
+TCGA-OR-A5L9-01	WXS	WXS	WXS
+TCGA-OR-A5LA-01	WXS	WXS	WXS
+TCGA-OR-A5LB-01	WXS	WXS	WXS
+TCGA-OR-A5LC-01	WXS	WXS	WXS
+TCGA-OR-A5LD-01	WXS	WXS	WXS
+TCGA-OR-A5LE-01	WXS	WXS	WXS
+TCGA-OR-A5LF-01	WXS	WXS	WXS
+TCGA-OR-A5LG-01	WXS	WXS	WXS
+TCGA-OR-A5LH-01	WXS	WXS	WXS
+TCGA-OR-A5LI-01	WXS	WXS	WXS
+TCGA-OR-A5LJ-01	WXS	WXS	WXS
+TCGA-OR-A5LK-01	WXS	WXS	WXS
+TCGA-OR-A5LL-01	WXS	WXS	WXS
+TCGA-OR-A5LM-01	WXS	WXS	WXS
+TCGA-OR-A5LN-01	WXS	WXS	WXS
+TCGA-OR-A5LO-01	WXS	WXS	WXS
+TCGA-OR-A5LP-01	WXS	WXS	WXS
+TCGA-OR-A5LR-01	WXS	WXS	WXS
+TCGA-OR-A5LS-01	WXS	WXS	WXS
+TCGA-OR-A5LT-01	WXS	WXS	WXS
+TCGA-OU-A5PI-01	WXS	WXS	WXS
+TCGA-P6-A5OF-01	WXS	NA	WXS
+TCGA-OR-A5OG-01	NA	NA	NA
+TCGA-P6-A5OH-01	WXS	WXS	WXS
+TCGA-PA-A5YG-01	WXS	WXS	WXS
+TCGA-PK-A5H8-01	WXS	NA	WXS
+TCGA-PK-A5H9-01	WXS	WXS	WXS
+TCGA-PK-A5HA-01	WXS	WXS	WXS
+TCGA-PK-A5HB-01	WXS	WXS	WXS
+TCGA-PK-A5HC-01	WXS	WXS	WXS

acc_tcga_pan_can_atlas_2018/data_genetic_ancestry.txt ADDED Viewed

	@@ -0,0 +1,6 @@

+ENTITY_STABLE_ID	NAME	TCGA-OR-A5LN-01	TCGA-OR-A5J1-01	TCGA-OR-A5J2-01	TCGA-OR-A5JB-01	TCGA-OR-A5JC-01	TCGA-OR-A5JD-01	TCGA-OR-A5JG-01	TCGA-OR-A5JH-01	TCGA-OR-A5JJ-01	TCGA-OR-A5JK-01	TCGA-OR-A5JP-01	TCGA-OR-A5JR-01	TCGA-OR-A5JS-01	TCGA-OR-A5JT-01	TCGA-OR-A5JU-01	TCGA-OR-A5JV-01	TCGA-OR-A5JW-01	TCGA-OR-A5JX-01	TCGA-OR-A5JY-01	TCGA-OR-A5JZ-01	TCGA-OR-A5K0-01	TCGA-OR-A5K1-01	TCGA-OR-A5K2-01	TCGA-OR-A5K3-01	TCGA-OR-A5K4-01	TCGA-OR-A5K5-01	TCGA-OR-A5K6-01	TCGA-OR-A5K8-01	TCGA-OR-A5K9-01	TCGA-OR-A5KB-01	TCGA-OR-A5KO-01	TCGA-OR-A5KP-01	TCGA-OR-A5KQ-01	TCGA-OR-A5KS-01	TCGA-OR-A5KT-01	TCGA-OR-A5KU-01	TCGA-OR-A5KW-01	TCGA-OR-A5KZ-01	TCGA-OR-A5L1-01	TCGA-OR-A5L2-01	TCGA-OR-A5L3-01	TCGA-OR-A5L4-01	TCGA-OR-A5L5-01	TCGA-OR-A5L6-01	TCGA-OR-A5L8-01	TCGA-OR-A5L9-01	TCGA-OR-A5LA-01	TCGA-OR-A5LB-01	TCGA-OR-A5LC-01	TCGA-OR-A5LD-01	TCGA-OR-A5LF-01	TCGA-OR-A5LG-01	TCGA-OR-A5LI-01	TCGA-OR-A5LJ-01	TCGA-OR-A5LK-01	TCGA-OR-A5LL-01	TCGA-OR-A5LP-01	TCGA-OR-A5LR-01	TCGA-OR-A5LS-01	TCGA-OR-A5LT-01	TCGA-P6-A5OF-01	TCGA-OR-A5OG-01	TCGA-P6-A5OH-01	TCGA-PA-A5YG-01	TCGA-PK-A5H8-01	TCGA-PK-A5HA-01	TCGA-PK-A5HB-01	TCGA-OR-A5J6-01	TCGA-OR-A5J8-01	TCGA-OR-A5JA-01	TCGA-OR-A5JE-01	TCGA-OR-A5JF-01	TCGA-OR-A5JI-01	TCGA-OR-A5JM-01	TCGA-OR-A5JO-01	TCGA-OR-A5JQ-01	TCGA-OR-A5KV-01	TCGA-OR-A5KX-01	TCGA-OR-A5KY-01	TCGA-OR-A5LE-01	TCGA-OR-A5LM-01	TCGA-PK-A5H9-01	TCGA-PK-A5HC-01	TCGA-OR-A5J9-01	TCGA-OR-A5J4-01	TCGA-OR-A5J3-01	TCGA-OR-A5J5-01
+EUR	Admixture % EUR	0.227574	0.972649	0.969359	0.878669	0.994499	0.973578	0.991851	0.951554	0.98409	0.995219	0.99996	0.99729	0.915292	0.977954	0.989433	0.983523	0.99996	0.984681	0.993045	0.999077	0.988061	0.999858	0.98982	0.998569	0.983651	0.981021	0.996985	0.952357	0.878303	0.991269	0.978565	0.983635	0.930217	0.98218	0.994144	0.991443	0.910151	0.968839	0.971917	0.98204	0.987079	0.986874	0.989237	0.973935	0.857593	0.952624	0.979601	0.962513	0.97586	0.992019	0.975907	0.949089	0.999655	0.982779	0.995745	0.947819	0.985457	0.873481	0.985297	0.781827	0.944127	0.915354	0.979543	0.98376	0.99996	0.92041	0.955726	0.372435	0.843486	0.782723	0.849099	0.639129	0.967328	0.99996	0.965	0.99995	0.991774	0.994835	0.918256	0.976752	0.981627	0.031722	0.069442	0.585706	0.722406	0.72755	0.734577
+AFR	Admixture % AFR	0.764389	0.021327	0.023423	0.091427	1.00E-05	0.02353	0.004376	0.033917	0.009471	0.002654	1.00E-05	1.00E-05	0.067486	0.019765	0.009158	0.009333	1.00E-05	0.014157	0.000806	1.00E-05	0.011909	1.00E-05	0.007415	1.00E-05	1.00E-05	1.00E-05	0.002179	0.031486	0.095075	0.006018	0.012569	0.013223	1.00E-05	0.008027	1.00E-05	0.004996	0.067428	0.021838	0.016643	0.014471	0.00783	0.006524	0.00828	0.018122	0.043628	0.033857	0.018343	0.022983	0.0175	0.006438	0.009346	0.037615	1.00E-05	0.00718	0.00202	0.043282	0.011574	0.103478	0.010255	0.192078	0.023012	0.053102	0.012845	0.008452	1.00E-05	0.012958	0.009639	0.53113	0.057177	0.107041	0.062474	1.00E-05	0.0249	1.00E-05	1.00E-05	1.00E-05	0.003767	0.003642	0.060811	0.003122	0.014941	0.020213	0.064858	0.281191	0.113839	0.111006	0.099139
+EAS	Admixture % EAS	0.007944	0.005063	1.00E-05	0.025695	1.00E-05	0.000731	1.00E-05	0.013256	1.00E-05	1.00E-05	1.00E-05	0.000756	0.017203	0.00226	1.00E-05	0.006069	1.00E-05	0.001143	1.00E-05	0.000893	1.00E-05	1.00E-05	0.001464	1.00E-05	0.008167	0.008488	1.00E-05	0.016136	0.023423	1.00E-05	0.008846	1.00E-05	0.01721	0.009527	0.002204	1.00E-05	0.02068	0.009303	0.006733	1.00E-05	1.00E-05	0.006583	0.002385	0.007922	0.03237	0.012266	0.000945	0.01021	0.005096	0.001523	0.006405	0.009026	1.00E-05	1.00E-05	1.00E-05	0.008698	0.00295	0.018117	0.004428	0.005446	1.10E-05	0.025244	0.001141	0.00595	1.00E-05	0.02131	1.00E-05	0.019975	1.00E-05	1.00E-05	0.007172	0.360841	0.005003	1.00E-05	0.032555	1.00E-05	0.00444	0.001503	0.019515	0.013926	0.00232	0.948045	0.86568	0.009943	0.022521	0.002319	0.00416
+AMR	Admixture % AMR	8.30E-05	0.000951	2.00E-05	0.004199	1.00E-05	0.002151	0.003753	0.001264	0.004695	1.00E-05	1.00E-05	0.001935	1.00E-05	1.00E-05	0.001389	0.001065	1.00E-05	1.00E-05	0.001939	1.00E-05	1.00E-05	0.000112	0.001291	1.00E-05	1.00E-05	0.003408	1.00E-05	1.00E-05	0.003188	0.002693	1.00E-05	1.00E-05	0.010231	0.000256	1.00E-05	1.40E-05	0.001731	1.00E-05	0.004696	0.003463	0.005071	1.00E-05	8.80E-05	1.00E-05	1.00E-05	0.001243	0.001102	0.004284	0.001534	1.00E-05	0.003663	0.00426	1.00E-05	0.001951	0.002215	0.000191	1.00E-05	0.004914	1.00E-05	1.00E-05	1.00E-05	0.00629	0.006461	0.001828	1.00E-05	0.045313	1.00E-05	0.076451	0.09131	1.00E-05	0.058715	1.00E-05	0.002759	1.00E-05	0.001093	1.00E-05	1.00E-05	1.00E-05	0.001408	0.00619	1.00E-05	1.00E-05	1.00E-05	0.123151	0.141224	0.159115	0.162115
+SAS	Admixture % SAS	1.00E-05	1.00E-05	0.007188	1.00E-05	0.005471	1.00E-05	1.00E-05	1.00E-05	0.001734	0.002107	1.00E-05	1.00E-05	1.00E-05	1.00E-05	1.00E-05	1.00E-05	1.00E-05	1.00E-05	0.0042	1.00E-05	1.00E-05	1.00E-05	1.00E-05	0.001401	0.008162	0.007073	0.000816	1.00E-05	1.00E-05	1.00E-05	1.00E-05	0.003122	0.042333	1.00E-05	0.003631	0.003537	1.00E-05	1.00E-05	1.00E-05	1.60E-05	1.00E-05	1.00E-05	1.00E-05	1.00E-05	0.066399	1.00E-05	1.00E-05	1.00E-05	1.00E-05	1.00E-05	0.004679	1.00E-05	0.000315	0.008079	1.00E-05	1.00E-05	1.00E-05	1.00E-05	1.00E-05	0.020639	0.03284	1.00E-05	1.00E-05	1.00E-05	1.00E-05	1.00E-05	0.034615	1.00E-05	0.008017	0.110217	0.022541	1.00E-05	1.00E-05	1.00E-05	0.001342	2.00E-05	1.00E-05	1.00E-05	1.00E-05	1.00E-05	0.001103	1.00E-05	1.00E-05	1.00E-05	1.00E-05	1.00E-05	1.00E-05

acc_tcga_pan_can_atlas_2018/data_log2_cna.txt ADDED Viewed

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1	+ RESOURCE_ID DISPLAY_NAME RESOURCE_TYPE DESCRIPTION OPEN_BY_DEFAULT PRIORITY
2	+ IDC_OHIF_V2 CT Scan PATIENT CT Scan TRUE 1

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+PATIENT_ID	RESOURCE_ID	URL
+TCGA-OR-A5J1	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.49355557987400344027775686673704794205
+TCGA-OR-A5J2	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.196877316647058549027120300438839406015
+TCGA-OR-A5J3	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.203268631021621549653292041757811537627
+TCGA-OR-A5J4	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.256629725284310610447112920371460377305
+TCGA-OR-A5J5	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.75077065435121219006320202781920996622
+TCGA-OR-A5J6	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.98721121681104810483271126552313907950
+TCGA-OR-A5J7	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.134548710480892111073647197669187227305
+TCGA-OR-A5J8	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.307985184491966734072454841711376845020
+TCGA-OR-A5J9	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.13206824990435723199189428119153390447
+TCGA-OR-A5JA	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.78238397204873391805861062599334022748
+TCGA-OR-A5JB	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.53377664319959833825096755656378821023
+TCGA-OR-A5JC	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.42196028108209215272287103249203057397
+TCGA-OR-A5JD	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.180480012725779212646153134496645576001
+TCGA-OR-A5JE	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.140043875154576413583377825196164455544
+TCGA-OR-A5JF	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.221203897214500222542251948679593994380
+TCGA-OR-A5JG	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.162134817367886066855586982331694551757
+TCGA-OR-A5JH	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.302421287025833901283636506027681010488
+TCGA-OR-A5JI	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.111323478690903296084796039609517813517
+TCGA-OR-A5JJ	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.51084411756177815366444865553541421622
+TCGA-OR-A5JK	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.319233639370835768840352125797572062146
+TCGA-OR-A5JL	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.280552808609798256833732317429653124239
+TCGA-OR-A5JM	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.265158819963478662319509146538924864097
+TCGA-OR-A5JO	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.74442198035906906677219792181146139895
+TCGA-OR-A5JP	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.152717959318016541357499069670649918227
+TCGA-OR-A5JQ	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.182964975921518092122342154322622834991
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+TCGA-OR-A5JS	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.135083561872901226157280858892769543014
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+TCGA-OR-A5JU	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.234746315267249136909285988629382363651
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+TCGA-OR-A5K0	IDC_OHIF_V2	https://viewer.imaging.datacommons.cancer.gov/viewer/2.25.7204391966592705652903029140959505449
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acc_tcga_pan_can_atlas_2018/data_rppa.txt ADDED Viewed

The diff for this file is too large to render. See raw diff

acc_tcga_pan_can_atlas_2018/data_rppa_zscores.txt ADDED Viewed

	@@ -0,0 +1,199 @@

+Composite.Element.REF	TCGA-OR-A5J2-01	TCGA-PA-A5YG-01	TCGA-OR-A5JV-01	TCGA-OR-A5JT-01	TCGA-OR-A5JR-01	TCGA-OR-A5JP-01	TCGA-OR-A5J6-01	TCGA-OR-A5J8-01	TCGA-OR-A5J3-01	TCGA-OR-A5J9-01	TCGA-OR-A5J7-01	TCGA-OR-A5K1-01	TCGA-OR-A5JY-01	TCGA-OR-A5JS-01	TCGA-OR-A5K6-01	TCGA-OR-A5K8-01	TCGA-OR-A5K3-01	TCGA-OR-A5JA-01	TCGA-OR-A5K0-01	TCGA-OR-A5K5-01	TCGA-OR-A5K4-01	TCGA-OR-A5JW-01	TCGA-OR-A5KU-01	TCGA-OR-A5KO-01	TCGA-OR-A5LS-01	TCGA-OR-A5LT-01	TCGA-OR-A5LG-01	TCGA-OR-A5LN-01	TCGA-OR-A5LO-01	TCGA-OR-A5LP-01	TCGA-OR-A5LK-01	TCGA-OR-A5LJ-01	TCGA-OR-A5LD-01	TCGA-OR-A5LL-01	TCGA-OR-A5LM-01	TCGA-OR-A5KZ-01	TCGA-OR-A5KY-01	TCGA-OR-A5KX-01	TCGA-OR-A5KW-01	TCGA-OR-A5LH-01	TCGA-PK-A5H8-01	TCGA-PK-A5HA-01	TCGA-OU-A5PI-01	TCGA-OR-A5JZ-01	TCGA-PK-A5H9-01
+YWHAE|14-3-3_epsilon	0.0789	-0.1705	2.4209	0.5761	1.3318	0.0205	-0.3851	-1.8296	-0.8504	0.5957	-0.2727	0.4092	0.7037	0.5869	0.1644	-0.3301	0.4915	-0.906	-1.1341	-1.4488	2.5833	-1.0705	-0.6848	-0.9958	0.2458	-0.33	-0.6097	0.8775	0.7314	0.3238	-0.5605	-0.8831	0.0225	-2.0974	1.1357	-0.4341	-0.4686	-1.5244	0.5412	1.1806	-0.1172	0.533	-0.6416	1.8752	0.3155
+EIF4EBP1|4E-BP1	1.5034	0.2049	0.9495	0.4453	-0.7301	0.173	0.5219	-0.1151	0.5778	-0.147	-0.4053	-1.5471	0.2911	1.0831	-0.2417	-0.6867	-0.1822	0.021	-1.5343	0.6733	0.5114	-1.9988	1.3643	1.4488	-0.3784	-0.6593	-0.3783	-0.8335	-0.584	0.2007	-0.9287	1.7083	-1.1794	-1.2217	-0.4593	3.6068	-0.1403	-0.2632	0.4101	-1.1294	0.3885	0.9769	-0.2117	-0.6422	-0.4624
+EIF4EBP1|4E-BP1_pS65	-0.0271	-1.3214	-0.5184	-0.6339	-0.551	0.0908	-0.9617	-0.3763	1.2564	2.323	-0.305	-0.1714	-0.817	0.2945	0.8437	1.2714	0.8365	0.2194	0.6449	1.0736	1.6118	-0.2514	0.4207	0.651	-0.3321	0.2755	0.0199	-1.1444	0.3934	-1.5763	-1.2048	-0.502	1.981	-1.4062	0.0638	0.3328	0.3709	2.3065	0.0662	-1.9212	-0.8537	0.4258	-0.3786	-1.5838	-0.9357
+EIF4EBP1|4E-BP1_pT37T46	-0.7907	-0.6029	-1.9507	0.5917	-0.5288	-0.1122	-0.9032	1.2868	2.0477	0.567	-0.0401	0.9703	-1.1397	0.4967	0.4919	0.4124	-1.6414	1.1058	0.3434	0.8209	-1.4645	0.2985	2.7667	2.0801	-1.9651	0.3024	0.1825	-0.135	-1.6876	-0.6517	0.0007	-0.0054	0.399	-0.1343	-0.8309	-0.538	0.2281	-0.3936	0.5251	-0.9633	-0.5164	0.3464	0.2208	-0.1581	0.6686
+TP53BP1|53BP1	-0.1278	-1.8768	-0.5897	-1.001	0.5625	-0.551	-1.4884	-0.2406	-0.2203	1.5275	-1.3592	0.5326	-0.2219	0.876	0.797	0.3472	-0.4722	1.8104	0.7463	-0.6494	0.2855	-0.2157	-2.5158	0.2083	-0.5907	-1.0919	0.0144	0.9177	1.342	-0.7938	-0.5392	0.4967	-0.4286	0.8763	1.7753	1.8124	-0.6487	0.4397	2.0723	-0.4718	0.4418	-0.0045	-0.0153	-1.3958	-0.3718
+ACACA ACACB|ACC_pS79	-1.3089	-0.8481	-0.8606	-1.6218	0.4036	0.4246	-0.214	-1.3678	0.8271	-0.4651	2.0038	1.2736	-0.3752	-0.9815	0.9291	0.4042	0.236	1.2281	-0.7817	0.8718	0.6471	0.9833	-1.4195	0.3954	-0.91	0.1824	-0.0081	0.6598	-2.0195	-0.1828	-0.6374	0.3854	-0.2729	-0.2441	1.2848	-0.4211	2.1467	-0.2939	1.6894	1.3211	-1.1849	-1.5297	-0.6466	-0.2696	0.5674
+ACACA|ACC1	-0.3527	-1.9233	-0.527	-2.2536	-0.0478	0.2062	-1.0005	-1.0632	0.901	-0.5224	2.0561	0.6793	0.6221	-0.6809	0.5465	-0.178	0.1924	0.8917	-0.8246	0.9316	1.2342	-0.5185	-1.2692	-0.0464	0.1036	0.0299	-0.2922	0.3368	-1.2628	-0.6873	-0.9553	0.2101	-0.0484	0.2283	1.0253	2.2409	1.8021	0.2397	1.509	0.6729	-1.0487	-1.8894	-0.3893	0.7305	0.391
+AKT1 AKT2 AKT3|Akt	-0.7271	-1.0364	-1.2508	-1.0558	0.2786	1.4438	-2.3823	-0.9145	2.1502	1.1186	-0.8381	0.5749	-1.6778	-0.0517	1.0542	0.013	-1.3726	-0.502	2.1744	-0.4268	0.1461	1.5919	-0.7778	0.6244	1.1952	0.9232	0.0494	-0.3099	-0.2117	-0.4927	-0.1424	-0.3115	1.2701	0.6838	-1.4252	-0.7627	0.2362	0.4667	1.0126	-0.0535	-0.7153	-0.7136	0.7958	-0.0661	0.4154
+AKT1 AKT2 AKT3|Akt_pS473	-0.6836	-0.2179	-1.4888	-0.3268	0.8395	1.2444	-0.3311	0.6833	1.6841	-0.9162	0.2236	2.5397	-1.2905	-0.4945	0.1265	-0.1306	-0.8409	0.5812	-0.7406	2.5095	-0.7692	0.5037	-0.0185	1.0278	-1.3352	1.2188	0.6731	0.6196	-0.4711	-0.4114	0.2555	-1.2561	-0.995	-0.2472	-0.8977	-1.7166	-0.1074	-0.9169	0.8523	-0.0869	-0.7867	-0.8704	0.2785	0.8273	1.6592
+AKT1 AKT2 AKT3|Akt_pT308	-0.7399	-0.3675	-1.1591	-0.2122	1.5095	1.5987	-0.4605	0.6176	1.7053	-0.8078	-0.7141	2.9055	-0.9429	0.4293	-0.0215	0.6415	-0.6483	-0.3626	-0.2936	2.3101	-0.8293	-0.1433	-0.0668	0.7639	-1.3269	0.8624	0.8641	0.6803	-0.5678	-0.9337	0.7015	-1.6007	-0.8596	0.1139	-1.1315	-1.3913	-0.4154	-0.5863	-0.2134	-0.7911	-0.291	-0.3321	0.3192	0.6327	1.5547
+PRKAA1|AMPK_alpha	-1.2212	-2.4698	-0.2892	-0.7534	0.1294	0.6317	-2.2898	-0.5977	0.4664	1.805	-1.0377	0.8056	1.3511	-0.457	0.3467	0.2157	0.7514	-0.1662	-0.1146	-0.0415	1.46	1.69	-1.3314	-0.4606	-0.8884	1.1005	0.4	0.1505	-0.2128	0.0434	-1.0184	0.5428	0.6883	-0.9151	0.9659	-0.5239	-0.1149	-1.4931	0.8718	0.0526	0.1951	-0.3099	-0.9596	0.7557	2.2465
+PRKAA1|AMPK_pT172	0.0962	-0.7498	0.3803	-0.155	-0.3048	0.8615	-0.5417	-0.7485	-0.7475	1.3542	-0.1085	0.4433	-0.2974	-3.1105	0.9057	0.1564	0.1721	-0.0286	0.7574	0.2937	-3.606	1.235	-0.3346	0.6614	0.0087	0.5693	-0.2185	0.2971	-0.508	0.4918	-0.1589	1.0039	-2.5656	0.9379	0.8693	-0.6094	-0.0455	0.1361	0.96	1.0816	-0.2006	0.4225	0.3872	-0.1545	0.7116
+AR|AR	0.013	-0.2305	-0.5722	1.093	1.8178	-0.9332	-1.3301	0.5665	1.672	0.0472	-0.8834	-0.0568	-1.0258	0.168	-0.4692	0.6585	-0.4781	-0.6921	-0.6117	-0.5713	1.4182	-0.1276	-0.0788	2.1118	-0.2993	3.3918	-0.9471	-0.3989	-0.6737	0.2602	1.5062	0.0557	0.5021	-1.9966	-0.7546	0.2782	-0.2869	-0.6594	-0.7348	-0.2632	-0.0189	-0.4686	0.514	0.7118	-1.2233
+ASNS|ASNS	2.7368	0.7704	-0.2264	-0.0951	-0.5519	0.8532	1.1873	2.6578	0.25	-1.4665	0.7834	0.3897	1.22	-1.1773	-0.0414	-0.2298	0.3245	0.3504	-1.8016	-0.8381	-1.3138	-1.4313	-0.1484	-0.1888	-0.0013	-1.0695	-0.3544	-0.6839	0.3809	0.8534	0.2011	1.2781	-1.0143	-0.9676	1.3907	0.2173	-0.158	-0.6021	0.1868	1.5131	-0.946	-0.6313	-0.3713	-0.2319	-1.0027
+ATM|ATM	-0.0778	-1.2873	0.3615	-0.4533	-0.3256	-0.3777	0.0101	-0.1045	0.4177	-0.0452	-0.182	0.6411	-0.1996	-0.3778	0.5011	0.8253	-0.1196	-0.7477	0.4405	1.5457	-3.1564	-0.0893	-0.8246	0.5047	-0.5851	-2.9546	1.0372	0.3515	0.0067	-1.112	0.1606	-0.2577	1.7894	0.9537	-0.884	2.4719	0.6455	-0.0294	0.6274	-0.492	-0.2986	-0.3448	0.5234	-0.1555	1.6675
+BAK1|Bak	0.6266	0.4892	0.1986	0.7288	-0.0472	-0.5653	1.2176	-2.2117	-1.5425	-0.2667	0.8113	-0.3417	0.2258	0.4642	-0.528	-0.0115	0.8389	-0.5671	-0.8882	-1.5434	2.1439	-1.1887	0.4578	-1.41	0.3542	-1.0071	0.2552	0.8547	-0.5972	1.0827	0.4902	0.4922	0.471	-1.848	-0.0427	2.6816	-0.8217	-0.0328	-0.9065	0.0799	0.4076	1.1117	-0.1571	1.2892	-1.2479
+BAX|Bax	-0.6653	-0.4784	0.5445	-0.6193	0.1419	-0.2159	-0.6883	-1.5679	0.796	-0.396	-1.1801	-0.1026	-0.1253	1.4251	0.0366	0.1802	0.8489	-0.3733	0.0764	0.4082	-0.2677	-1.5018	-0.2567	-0.4603	-0.487	0.5881	-0.1657	-0.375	0.038	-0.1705	-0.8476	-0.7393	2.284	-3.0539	-0.0513	0.5484	-0.6862	0.8581	1.6747	-0.7737	2.6768	1.734	0.0089	0.9255	0.4547
+BCL2|Bcl-2	0.3412	1.9762	1.4224	0.8233	0.4178	-0.6087	1.981	0.3512	-0.8903	0.2384	-0.4132	-0.1992	-0.176	-1.1545	0.2757	-0.2718	0.809	-0.6173	-0.8012	-1.9486	-0.3049	-0.8415	-1.0927	-2.2039	0.8436	-1.0136	0.2737	0.5967	-0.1224	1.5851	0.7499	-0.9707	0.2774	-1.2581	-0.2311	-0.1683	-0.8764	-0.1216	-1.1345	0.9747	-0.3509	0.2414	0.6297	0.2874	2.6758
+BCL2L1|Bcl-xL	3.1193	-0.4708	-0.4329	-0.5983	0.0793	-0.7336	-2.6673	-0.8139	-1.9743	0.9545	-1.1399	0.2391	-0.3139	-0.4037	-0.1745	0.8834	0.1275	-0.04	0.1699	0.8983	1.005	1.5251	0.7986	0.14	-1.2657	-0.1272	0.0887	0.015	0.2292	0.4839	0.686	1.7913	-0.3077	-1.2296	-0.1432	-0.4598	-0.0852	-0.4082	-0.3772	-0.9718	0.8598	-1.1725	1.7848	0.2943	0.138
+BECN1|Beclin	1.0862	1.512	1.0868	-0.5198	0.4428	-0.3544	1.0124	-2.0095	-0.34	1.428	-0.0993	-0.2039	-1.1685	-1.0684	-0.6561	-0.0213	0.4367	-0.6657	-1.0811	-0.8518	0.1006	-0.738	-1.0085	-0.7576	1.2915	0.1264	0.5518	0.0582	0.2876	1.3727	0.0745	-0.0391	1.89	-1.5543	0.6183	-1.2844	-0.8537	1.1606	-1.0365	3.0503	-0.2552	-0.3102	-0.1034	-0.0988	-0.508
+CTNNB1|beta-Catenin	-0.4246	-1.2688	-1.468	-1.8914	-1.4237	0.3185	-0.9302	-0.7258	0.9492	1.1809	-0.3254	0.0264	1.4844	-1.1204	-0.7734	0.9437	-0.6375	0.3332	2.2931	1.0851	-0.8827	1.085	0.3689	1.5511	0.2759	0.2275	1.1455	-0.299	0.1896	-0.6334	-0.526	1.3852	0.4816	1.1262	0.055	-0.3582	0.5374	0.219	0.7453	-1.625	-0.9259	-1.7846	0.7746	-1.0499	0.2913
+BID|Bid	0.9556	-2.0074	-0.8408	1.4272	-1.0556	0.3491	-1.6333	0.5099	-0.9301	0.7753	-0.8916	-0.7189	0.4008	-0.472	0.9027	-0.8411	-1.0442	-0.6736	-0.2715	1.0419	0.2196	-0.8686	2.2103	-0.4978	0.3326	-0.3364	-1.1131	-0.1075	0.5228	-1.2354	0.369	0.8645	2.033	-0.2199	-0.0881	2.2436	-0.9589	1.7377	-0.6573	0.0018	-0.6405	1.1762	0.2644	0.1863	-0.4203
+BCL2L11|Bim	2.4599	-0.0231	3.1198	-0.8756	-0.0598	-1.2316	0.7698	-0.0779	-0.8372	0.3123	-0.1317	-1.309	-1.0654	0.3729	0.5808	-0.3712	1.045	0.455	-1.2663	-0.8223	-1.1755	-0.1305	1.5163	-1.0605	-0.5559	0.1611	0.4754	0.0637	-0.1438	0.2211	1.3798	1.4919	-0.3639	1.5074	-0.3702	-1.2835	-0.7697	0.3729	0.6204	0.2252	-0.8299	0.1841	-0.2377	-1.2279	-1.1146
+JUN|c-Jun_pS73	-0.4048	0.431	-0.0611	-0.0254	-0.3081	0.1814	0.941	2.5111	0.4613	0.2361	0.2718	0.3592	-0.7167	-2.1573	-0.2547	0.9661	-0.1159	1.5721	-0.2245	-0.1895	-1.4732	0.038	0.7399	2.5893	-0.9204	0.6045	-0.3238	-0.7882	-1.0198	0.5879	-0.157	-0.5881	-0.1988	-1.9115	-0.7734	-0.8087	-0.5331	-1.0199	0.4516	-0.3175	-0.3424	1.6436	-0.6375	2.2175	-0.532
+KIT|c-Kit	-0.2277	0.0422	0.6174	-0.5903	-0.8507	-0.8178	-0.162	-1.0757	1.4691	-0.1571	0.5104	-0.9732	0.1789	-0.8131	-0.6124	-0.6078	0.5126	-0.3199	2.0466	-0.2091	-0.5301	-0.4129	-0.0788	0.5225	1.7039	-0.8384	0.539	-0.7554	-0.4699	-0.5875	-0.0875	-0.7652	-0.7092	-0.3006	2.0174	4.2511	-0.4614	0.1123	1.2142	-0.2426	-0.8392	-0.5118	0.135	-0.377	-0.4883
+MET|c-Met_pY1235	0.9108	-0.4027	-0.0924	1.2549	-0.0516	-0.9318	-1.9354	-1.9388	-1.1453	0.7561	-1.0229	-0.6303	-0.472	1.2231	0.9297	0.1252	0.0342	-1.3751	0.0892	-0.1371	2.7029	-0.28	0.0261	-0.4719	0.4616	-0.2381	-0.8473	0.1888	0.6916	1.2156	0.17	0.7839	1.0692	-1.6302	-0.2937	2.3394	-0.3266	0.6119	-0.0382	0.8286	-0.0762	0.3889	-0.4451	0.0037	-2.0226
+MYC|c-Myc	0.6999	1.7087	1.663	1.1289	-0.0619	-0.0384	1.3662	0.0351	-1.0817	0.7498	0.4606	0.6039	-0.0176	-0.4093	-0.1428	-0.2442	1.5976	-1.7104	0.3022	-1.3998	0.8143	-1.2829	-0.3172	-1.8438	-0.0983	-0.9186	0.176	-0.2382	-0.1381	2.3875	-0.0058	0.2362	2.187	-1.7736	-0.8084	-0.327	-0.9761	-0.855	-0.5735	-0.2174	-0.0967	0.1914	-1.3913	0.0871	0.5724
+RAF1|C-Raf	1.2835	-1.8591	-0.3708	0.276	-0.6144	-0.5943	-2.0777	0.4622	0.1193	0.1767	-0.4824	-1.9044	-0.1553	0.5811	1.1515	-1.6111	-0.8025	-0.3909	1.9149	1.1179	0.661	-0.217	-0.0142	1.2465	0.598	0.2324	-0.8383	-0.5916	1.3026	-0.5602	0.7172	0.1294	-1.6158	-0.5789	1.0037	2.9084	0.3627	-0.0228	0.1215	-0.8284	-0.5542	0.8967	-0.1239	-0.2281	-0.2273
+RAF1|C-Raf_pS338	1.3007	-0.2297	0.3809	2.6219	-0.3979	-0.6338	-0.3606	3.0182	-1.0149	0.9751	-0.8879	-0.6144	0.7028	-0.0674	0.4719	-0.3377	-0.3038	-0.3803	-0.3298	0.4392	0.2972	-0.7662	2.1428	-0.7828	0.0616	-1.4092	-0.0849	0.6391	0.6585	0.6465	0.1939	-0.3562	0.3618	-2.3619	-0.1611	0.0551	-1.7236	-0.2039	-0.2234	0.8163	-0.8849	0.7124	-0.538	-0.2065	-1.2351
+CASP7|Caspase-7_cleavedD198	0.8197	0.2853	-0.0731	1.3835	-0.4262	-0.4212	0.9676	1.1163	-0.984	0.3958	-0.319	-0.8033	1.7509	-0.6407	-0.4922	-0.4413	-0.644	-1.1201	-1.1583	-0.0302	-0.8938	-1.5698	1.6085	-1.774	0.0145	-0.8781	-0.3816	0.6143	-0.061	0.3314	0.4679	2.0885	1.8367	-1.8361	-0.1336	2.0417	-1.4261	1.206	-0.8595	0.3443	-0.5626	0.2202	-0.0942	0.5903	-0.0596
+CAV1|Caveolin-1	1.5306	-0.6867	-1.1002	0.3966	-0.7718	-0.1128	0.3101	0.398	-1.0457	1.3162	0.8766	-1.2371	-0.0936	-0.9517	1.0031	-0.5046	-0.6837	0.081	-2.1436	-0.0643	0.8843	1.2546	-0.0693	-0.1776	1.0278	-2.1785	0.1263	0.6656	0.1974	-0.1929	0.5826	1.0785	-0.1602	-0.4677	-1.6199	-1.0832	-0.2954	1.2075	0.1422	-1.4945	0.403	1.1672	2.4653	-0.9659	0.9866
+PECAM1|CD31	0.978	2.3422	1.3761	0.192	0.6203	-0.0063	2.4564	-2.2457	-0.7626	0.4041	-0.2749	0.5373	0.1876	-0.7438	-0.2529	0.1895	1.0277	-0.5934	-1.2866	-1.087	-0.0799	-0.6731	-1.0655	-1.5498	0.7083	-0.9746	0.7135	0.4421	0.2753	1.7891	0.3191	-0.9944	-0.2546	-1.5484	-0.2455	-1.5588	-0.8561	-0.1805	-0.6785	1.0971	0.2227	0.7279	0.2164	0.5304	0.5596
+ITGA2|CD49b	0.3836	0.7009	0.2464	0.2371	-0.1118	-0.9334	0.0762	-2.5129	0.0395	-0.7093	0.0125	-0.5816	2.3146	1.3529	1.5333	-0.6382	-0.6109	-0.5088	-0.4939	-0.4084	-0.3943	1.1142	0.1992	-1.2344	0.7005	-0.6155	0.3578	-0.2856	-0.1681	0.1452	-0.2826	2.6029	-0.5663	2.4743	-0.1488	-0.2629	-0.2433	-1.4065	-1.3771	0.2328	-0.1652	-0.8009	1.2297	0.602	-1.0949
+CDK1|CDK1	0.7152	2.0889	1.8486	0.5169	-0.0289	0.3166	3.1037	-0.9873	-0.8932	-0.2315	0.4838	-0.1152	0.0447	-1.4874	-0.6311	0.1067	0.5077	-0.3819	-0.7853	-1.5685	-0.3985	-1.34	-0.8029	0.5432	0.4148	-1.2982	0.7678	-0.3999	-0.1287	1.9226	-0.3501	0.3203	1.6673	-1.7764	-0.6741	-0.0263	-0.3321	-0.3661	-0.7629	0.7216	-0.1322	0.0679	-1.0042	0.2249	0.5199
+CHEK1|Chk1	0.0239	1.7578	0.7506	-0.18	0.2087	0.2481	2.1365	0.2359	-1.4479	-0.3043	0.0787	0.1319	0.2132	-0.6901	-1.4695	-0.0828	0.5162	-0.2458	-1.5975	-0.0331	0.4169	-1.006	-1.9433	0.3327	0.0299	-0.5338	0.5776	-0.5576	-0.164	1.5935	-0.3074	0.0471	1.9102	-1.9474	-0.1846	3.1693	-0.3301	0.2544	-0.8	0.5381	0.0784	0.0871	-1.0799	0.1346	-0.5657
+CHEK1|Chk1_pS345	-1.5828	0.4492	1.0541	1.7302	0.986	-0.076	0.9855	-2.4439	-0.5965	-0.3028	-0.3475	1.3814	-0.9699	-1.8726	-0.6379	1.28	1.279	0.6646	-1.2197	-0.5641	-0.3908	1.2826	-0.491	0.2388	-1.0861	0.9241	0.6696	-0.0517	-1.4305	0.5805	0.3082	1.0772	-1.0213	-1.4368	1.0871	0.5483	0.1483	-0.7012	-0.173	0.6111	0.788	1.2771	-0.9117	-0.3472	-0.696
+CHEK2|Chk2	-0.8054	1.3002	0.912	1.812	-0.0354	0.2244	-0.2645	-0.7988	0.1669	-1.2816	-0.7487	1.2352	-1.1578	-0.2244	0.18	-0.1097	0.1949	0.9421	-0.3882	0.2568	-0.2472	-1.3208	-1.5685	0.4453	-0.8408	-0.5677	0.043	-0.9476	0.1006	0.0732	-0.2074	1.2426	0.4585	-2.3381	-0.8318	3.1458	1.3782	0.8592	0.0412	1.0862	-0.1229	-0.2824	-1.0072	1.0631	-1.0645
+CHEK2|Chk2_pT68	0.6315	1.4191	0.5782	0.8538	-0.0986	-0.4763	2.1576	0.8492	-0.3625	0.0807	-0.6263	-0.225	-0.1373	-0.941	-1.0788	-0.519	0.18	-0.3047	-0.895	-1.2641	-0.4495	-1.0955	0.3372	-1.088	0.6983	-0.5194	-0.2124	-0.1083	0.2182	1.1308	0.3652	1.9945	0.2228	-3.4129	0.0431	2.2489	-0.7172	0.6188	-1.2552	1.113	-0.384	0.8591	-0.2125	0.1091	-0.3257
+BIRC2 |cIAP	0.0547	-0.2275	1.2568	1.3106	1.7126	-0.2534	-0.9051	-1.8443	-1.0867	-0.363	-0.4497	0.816	-1.7143	-1.7253	-0.9926	0.4743	1.4251	-0.2576	-0.1617	-0.8882	1.8203	-0.6283	-1.3648	-0.3719	0.7248	0.0939	-0.625	0.2533	-0.1008	2.5657	0.8878	-0.1326	0.123	-1.1307	0.4811	-0.628	-0.1117	-1.2019	-0.761	0.4386	1.0053	1.376	0.1034	1.0254	-0.0228
+CLDN7|Claudin-7	-0.1017	1.533	0.7451	0.1713	0.4359	0.0424	2.1916	-2.9124	-0.7543	0.7928	0.1728	-0.4631	-0.1451	-0.2826	0.4148	0.9695	-0.1172	0.1152	-1.5865	0.6439	1.3929	-0.2726	-0.9097	0.9932	0.2318	-0.8993	0.2489	-0.2542	-0.5049	1.7552	0.1882	-0.1263	0.7961	-1.5984	-1.0997	-1.8957	-0.415	-0.001	0.4881	1.4602	0.1645	1.0155	-1.6294	-0.5949	-0.3988
+COL6A1|Collagen_VI	0.468	-1.9479	1.3966	3.5245	-0.0155	-1.7281	-1.1031	1.1119	0.2415	-0.4165	0.05	-1.4958	1.6043	0.8934	0.3066	-0.6363	0.6684	-0.3974	-1.1798	0.3444	0.488	-1.2934	0.8194	0.1575	0.65	-1.3843	-0.0499	-0.913	-0.3501	-1.2302	0.153	-0.3566	0.4773	0.4105	0.8919	-0.3121	-0.2733	-0.2261	0.1766	0.1543	-0.0931	-0.2768	1.1768	0.7791	-1.265
+CCNB1|Cyclin_B1	0.1878	-0.225	-0.5122	-1.146	-0.4783	0.5212	0.0363	0.43	-0.6113	-0.8495	0.4274	-0.4656	0.4201	0.6189	-0.8923	0.039	-0.188	1.3073	0.0444	0.2808	0.1336	-1.1165	-1.4587	3.6077	-0.1488	0.0606	-0.0565	-0.8973	0.4245	-0.1905	-0.7203	2.0064	1.7475	-1.532	0.3752	2.5045	0.7717	-1.0388	0.0032	-0.5504	-0.3373	-0.2698	-0.3238	-0.9054	-1.034
+CCND1|Cyclin_D1	0.5211	-0.4665	-1.1117	0.938	0.164	-0.386	-0.4914	0.5574	-0.8007	-0.5548	0.0516	-0.0096	3.6966	1.2341	0.2072	-0.5344	-0.987	-1.1229	0.5199	0.3221	-0.3384	-1.2316	1.2585	-0.2924	-0.4074	-0.0369	-0.272	0.3648	-0.0754	-0.1849	1.3473	0.8081	-0.07	-0.5414	-0.9307	-0.0252	-0.8216	1.0436	-0.708	0.3149	0.0443	0.2439	-3.051	-0.0577	1.8718
+CCNE1|Cyclin_E1	-0.8004	-1.5591	0.4084	-1.5906	-0.9474	0.598	-0.853	-1.7221	-0.4396	0.8984	0.4211	0.0737	-0.3708	1.1915	-0.6708	0.4475	0.6928	1.4584	0.0136	0.4977	1.9836	-0.6294	-0.2768	0.8108	-0.0717	-0.1647	-0.6274	-1.5289	1.7323	-1.148	-1.2192	0.3226	1.282	-1.6544	0.9068	0.5659	0.9316	1.1545	-0.3973	-0.8295	1.9494	-1.0151	-0.4749	0.8066	-0.1558
+PARK7|DJ-1	-0.8728	-0.3775	-0.8652	-0.3474	-0.8137	0.0221	0.7502	-2.3348	0.6412	-1.0757	-0.1042	0.5261	-1.3189	1.514	-0.0287	-0.3639	0.511	0.1988	1.4113	-0.9521	2.4615	-0.0944	-1.2726	-0.2595	0.1762	-0.8606	0.6292	-0.0102	0.1833	1.1408	-0.7002	-0.034	0.404	2.9967	0.8359	-0.8176	1.2171	-1.591	0.3544	0.1339	0.2571	-1.2942	-0.3298	0.2102	0.1439
+DVL3|Dvl3	0.3463	-0.1509	-0.226	-1.4459	-1.1102	1.328	-0.4325	-0.1002	-0.2372	1.1686	0.6087	-1.6952	0.7931	-1.8669	-0.601	-0.2904	-0.3731	0.0948	0.2937	1.3181	-1.7701	-0.45	-0.5158	1.3489	0.995	-0.8981	0.5001	-0.6678	1.4174	0.4908	-0.3099	1.9211	2.6122	-1.3866	0.6416	0.2011	0.8559	0.6427	-0.3815	-0.4834	-0.1941	-0.3604	0.6439	-1.6276	-0.6474
+CDH1|E-Cadherin	0.2353	2.2954	0.3274	-0.235	0.542	0.5481	2.356	-1.7489	-0.6534	-0.5416	-0.1203	0.7081	-0.4905	-1.214	-0.846	0.4874	0.7875	-0.4006	-0.9571	-1.1806	-0.32	-0.3351	-1.0873	-1.209	0.2276	-0.27	0.9998	0.3363	0.1364	1.8382	0.3597	-0.7004	-0.3099	-0.8752	-0.3485	-1.0374	-0.5122	0.1875	-1.032	0.7125	0.2361	0.8996	-0.8224	-0.0918	3.1181
+EEF2|eEF2	-0.432	-1.2634	-0.7457	-1.8701	-0.7424	1.6583	-1.6344	-1.4076	0.285	0.4791	-0.0402	-0.5499	-0.6039	1.1391	-0.1643	0.7469	0.3088	0.4024	-0.2246	2.4042	0.7524	-0.4409	-0.9262	0.526	-0.1726	0.1442	0.1768	-0.7092	0.7389	-0.2135	-0.8904	1.0096	0.8633	-0.7457	0.6786	2.3003	0.5497	-1.4099	1.4899	-0.2209	1.6778	-0.1989	-1.3148	-1.0109	-0.3991
+EEF2K|eEF2K	-1.333	-0.3214	-0.9983	-1.0906	0.635	-1.0869	-0.9193	-1.4016	2.4532	-0.1746	0.4635	0.5011	-1.5465	-0.467	0.1379	1.3917	0.168	0.2349	0.0919	-0.5786	0.6808	0.8382	-0.8959	1.7341	0.7132	0.1176	0.4258	-0.2497	1.8488	0.1379	-0.8779	-0.3394	-0.1481	-0.9464	1.6762	0.1231	0.6954	0.1243	2.1407	-1.0603	-0.7886	-1.019	0.958	-1.4385	-0.6097
+EGFR|EGFR	-0.8147	0.112	-0.8481	-0.3994	-0.4312	-1.2241	-0.1159	-0.6712	1.1394	-0.8421	0.7306	-0.7504	0.124	-0.0666	-0.7182	1.1345	-0.937	2.1381	-1.8063	-0.1729	-0.8014	2.208	-0.1933	0.3957	0.9389	-0.5734	0.2683	-0.4794	1.0449	0.3402	-0.3874	-0.255	-0.9486	2.6429	0.3549	0.876	-0.0114	-0.247	2.1245	-0.4136	0.9698	-0.7182	-0.1025	-0.77	-1.8432
+EGFR|EGFR_pY1068	-0.5208	1.7708	-0.266	-0.3285	-0.0324	0.4347	2.3871	-0.5614	-0.1797	-0.9393	0.1046	-0.2074	-0.2025	-1.2647	-1.1367	0.4902	0.0908	2.7282	-1.8052	-0.3208	-1.101	0.4668	-0.6081	-0.1273	0.1594	-0.1044	0.667	-0.4917	0.5762	1.3272	-0.2126	-0.3422	-0.754	0.7599	-0.2916	-1.0324	0.0462	0.0831	2.2704	0.6713	-0.0487	0.1583	-2.6822	-0.1766	0.546
+EGFR|EGFR_pY1173	0.1193	-0.2282	0.4057	1.2697	0.0289	-0.1628	-0.0273	-0.8578	-0.5711	0.4003	-0.1035	-0.0719	-0.3525	0.3413	0.7321	-0.0135	-0.1453	0.0748	-0.4216	-0.3831	1.2652	-0.4876	1.4328	-0.3818	0.1528	0.0656	-0.3943	0.0001	0.4808	0.536	0.4799	0.5658	-0.2297	0.1448	0.1159	0.8783	-0.7926	0.1291	0.5375	1.0144	0.2469	0.7554	-5.5676	0.0296	-1.0107
+EIF4E|eIF4E	0.2615	-1.4082	0.9466	0.5243	0.7237	-0.5012	-0.5795	0.2817	0.542	1.3803	-0.1149	-1.2006	-0.6849	-0.5475	0.6139	-0.5996	-0.8602	0.7505	-1.6938	-0.1708	2.0888	0.0324	0.5136	1.0938	0.4948	0.9206	-0.8906	-0.5464	0.8917	-0.5255	-0.0517	-0.5945	-4.1536	0.2743	1.375	0.3199	0.0045	-0.6794	1.1649	0.6783	-0.3598	-0.0654	0.0756	0.2248	0.0508
+ESR1|ER-alpha	0.6115	2.2242	0.2311	0.0767	0.414	0.585	2.6861	-0.7663	-1.6513	-0.6149	-0.4906	0.1948	-0.4209	-1.2086	-0.507	0.0807	0.327	-0.8152	-1.3302	-1.1516	-1.0565	-0.1048	-0.1006	-1.9553	0.3213	-0.3786	1.0529	0.4543	0.1827	1.6276	1.4499	-0.8215	0.6288	-0.7652	-0.5013	0.0549	-1.2762	1.4499	-1.4307	0.8663	-0.0476	1.1079	0.1922	-0.4106	0.9854
+ESR1|ER-alpha_pS118	0.3218	1.178	1.2145	-0.2185	0.4482	-0.4914	1.4741	-2.082	-0.173	0.517	-1.4225	0.296	-0.0955	1.2127	0.1299	0.9416	-0.039	-0.9981	-0.9975	-1.1292	1.5679	-0.4759	-1.1325	-2.1755	0.0355	0.8226	0.3617	0.276	0.2971	1.4883	0.0943	-0.538	0.6331	-2.6341	0.5984	0.8746	-0.8644	1.0732	-0.3508	1.1194	0.5708	0.528	-0.2782	-0.5346	-1.4439
+MAPK1|ERK2	1.1977	-1.2382	-0.5956	-0.6881	-1.2653	-0.1444	-0.8708	0.0587	-0.3901	-0.2754	-0.7032	-0.8959	1.7909	2.3559	1.8733	-0.5278	-0.6716	-0.1406	1.4237	0.5841	0.5082	-0.626	-1.0939	0.0584	-0.7215	-0.4975	0.4352	-0.6406	0.3742	-0.892	-0.7575	1.1095	1.1513	2.1795	-0.8971	0.8235	1.4144	-0.5773	1.089	-0.1396	-1.3297	-0.9729	0.6593	-1.2812	-0.2533
+FN1|Fibronectin	1.1847	-1.5489	-0.9324	0.2528	-2.1494	-0.1464	-1.2307	2.0126	-0.2429	0.1943	-0.2273	-0.5136	0.6261	0.1505	-0.0471	-0.2437	0.315	1.6467	-0.7005	0.8332	-0.9159	-0.737	1.2515	0.3287	0.3296	-1.2374	-1.0894	-1.9278	0.6305	-0.0846	-0.4586	0.469	0.8738	0.0508	-1.1138	1.1079	0.7821	2.292	0.3645	-1.6935	-0.4179	-0.1529	1.2034	0.9934	-0.0816
+FOXO3|FOXO3a	0.6894	2.385	0.8598	0.999	0.6043	0.1771	2.8239	-0.2556	-1.1238	-0.3524	-0.5233	0.2546	-0.1572	-1.2535	-0.6861	0.3039	1.0983	-0.8583	-0.9995	-1.9027	-0.5611	-0.5847	-0.632	-1.7727	0.5802	-0.2186	1.3181	0.6302	-0.2413	1.9539	0.4533	-1.1797	-0.1789	-0.7585	-0.3731	0.0961	-0.5945	-0.1115	-1.6174	1.0206	-0.3651	0.8284	-0.4403	0.4066	0.2591
+GAB2|GAB2	1.032	-0.909	0.6583	-0.485	-0.7176	-0.1033	-0.2365	1.4854	-1.0559	1.2792	2.4305	-1.0399	0.0496	0.3439	-0.6015	-1.1991	-0.5778	-0.5601	0.6423	0.9992	-1.1475	-0.2477	0.8959	0.5938	0.2547	0.1637	-0.4478	-0.3556	1.6668	-0.0956	-0.116	0.9647	-0.7108	-1.9786	-0.4848	-1.2255	0.5532	1.6791	-0.613	-0.8829	-1.1117	1.0695	0.8833	-2.0107	1.2688
+GATA3|GATA3	1.7833	1.6339	-0.2165	-0.2901	-0.3299	1.8864	1.7562	-1.598	-1.0028	1.9792	1.7786	0.6611	-0.6682	-0.4553	-0.79	0.5969	0.6293	-0.8484	-1.1292	0.5298	-0.6225	-0.7718	-1.0974	-1.2988	-0.2221	-0.6843	1.1302	0.6227	-0.6522	1.4419	-0.3956	0.9143	1.2035	-1.1084	-0.7955	-0.9958	-0.7271	0.6414	-0.7116	-0.2705	-0.5896	-0.4284	-0.6197	-0.4759	0.6069
+GSK3A GSK3B|GSK3-alpha-beta	0.0929	-2.2226	0.4272	-1.4782	-0.4628	0.3126	-2.444	-0.8196	0.7087	1.9084	0.5361	-1.0511	-0.9263	0.6852	0.5114	0.0562	0.3255	0.5421	-0.5199	1.7227	1.0647	-0.9019	-0.5893	1.6548	-0.0847	0.8923	0.3342	-0.5799	-0.4988	-0.6211	-1.1991	1.2213	1.7009	-0.3913	0.1799	1.477	1.1915	-0.5065	-0.5463	-1.1564	0.5885	0.3172	-0.0036	-0.876	-0.572
+GSK3A GSK3B|GSK3-alpha-beta_pS21_S9	-1.5638	-0.4943	-1.2581	-0.4866	0.6657	0.7712	-0.3035	-0.4973	1.4166	-0.1759	0.8826	0.9523	-1.0828	-0.3062	0.6162	0.7458	-0.2399	1.2313	-0.3527	0.8113	-0.8816	0.9305	-0.5967	1.7351	-1.0644	1.6117	1.7518	0.2646	-1.0002	-0.9405	-0.0581	-1.6128	-1.9627	1.3067	0.1631	-2.2703	1.1811	-0.8197	0.2275	-0.6876	0.0247	0.5888	0.1394	-0.2109	0.8486
+ERBB2|HER2	0.5346	0.248	-0.8592	-0.087	-0.3133	-0.9764	0.3736	1.7879	-0.5371	0.3158	-2.1948	-0.5642	-0.6948	-0.916	0.0723	-0.3408	0.3266	0.3023	0.2748	-1.768	-0.3965	-1.0717	1.3759	-0.6221	0.5016	-0.5622	0.6551	-0.8932	-0.61	0.8941	-0.4744	-0.6215	0.7371	0.2667	0.0167	-1.6694	-0.1046	-0.076	-0.104	0.8598	0.3107	-0.0392	2.6974	0.8185	3.1269
+ERBB2|HER2_pY1248	-0.4709	2.084	0.8859	0.0638	0.0373	-0.0602	3.2709	0.1482	-0.4877	-1.0261	-0.2998	-0.5304	0.0982	-1.6688	-1.0327	0.1571	0.1374	2.2038	-1.4622	-0.7615	-0.574	-0.5433	0.3074	-0.9999	0.2576	-0.7271	0.6309	-0.8059	0.085	1.6374	-0.291	-0.6164	-0.8282	-0.0664	-0.7528	-1.0676	-0.3691	-0.483	1.4315	0.9904	-0.6228	0.2694	-0.3765	0.6765	1.5518
+ERBB3|HER3	-0.6224	0.0923	-0.2282	-0.6235	-0.6274	-0.6922	0.8118	0.3826	0.0774	-0.273	0.2294	-0.6349	1.475	-1.0863	-0.7402	-0.4259	1.793	-0.4102	-0.3491	-0.3567	-0.3391	-0.7301	-0.1065	-0.9012	2.4844	-1.0696	-0.2021	-0.1962	0.1138	-0.2018	-0.3508	-0.5105	-0.2858	-1.038	1.3697	0.4541	-0.9684	-0.2347	-0.7879	1.9324	-0.091	-0.4256	-0.3795	0.7414	3.9313
+ERBB3|HER3_pY1298	-0.2725	-0.2727	-0.2665	0.9038	0.1568	-1.7706	0.1887	-1.3655	-0.8668	-1.3714	-0.4096	0.0566	0.144	0.9224	-0.595	-1.208	-0.3354	0.2731	0.2331	0.4228	1.5322	-0.1418	0.7103	2.6169	-0.6411	-0.534	-0.029	-0.1413	-1.7627	1.7202	0.2204	0.3461	-0.4075	-1.2971	-1.0407	0.0668	-1.2208	-0.2033	1.5577	0.7992	1.2098	0.9649	-0.6593	-0.5999	2.3668
+HSPA1A|HSP70	0.7642	-0.6491	0.0205	0.7382	-0.735	-0.2941	0.2117	2.4026	-1.5972	-0.3248	-1.3831	-0.1773	2.2489	-0.6857	-0.2919	-1.1092	-0.1844	-1.0404	1.1434	-0.6521	-0.7619	-1.3877	0.508	-1.1821	1.3351	0.7107	-0.6171	0.2421	1.186	-0.4529	1.9425	-0.734	0.6572	-1.1516	-0.444	0.77	-1.7003	1.4266	0.0424	0.9241	-0.7717	0.9602	-0.0905	-0.0245	0.2082
+IGFBP2|IGFBP2	-0.4847	-0.2049	-0.2711	-0.24	-0.6328	2.8353	0.9529	0.7281	-0.6832	-0.7174	0.1828	-0.4968	0.3314	-1.0427	-0.6441	-0.475	-0.3045	0.458	0.6683	-0.0897	0.7141	-0.7867	2.9741	-0.0868	-0.401	-1.1868	0.3763	-0.8122	0.0902	-0.27	-0.2301	-0.2824	0.2377	-0.1449	-0.5663	0.987	-0.9132	3.6569	-0.2941	0.1349	-0.5277	-0.0238	-1.0396	-0.4552	-1.0203
+INPP4B|INPP4B	2.5987	1.8762	2.7689	0.7465	0.1552	0.0987	1.812	-1.4713	-0.7558	0.4693	-0.5181	-0.1305	-0.2306	-0.6651	-0.3262	-0.4949	0.3625	-0.68	0.4465	-0.7063	2.0095	-1.2304	0.2636	-1.2684	-0.0472	-1.0321	0.1902	-0.237	0.2064	1.6442	0.0051	-0.3843	-0.5341	-1.5108	-0.2863	-1.1691	-0.8962	-0.373	-0.9431	0.3096	-0.6427	0.1498	0.2502	-0.095	0.2655
+IRS1|IRS1	0.2495	0.0948	0.0011	0.1319	-0.3015	-1.7098	-0.8407	-0.2384	1.1574	-0.1541	1.6321	-1.1404	-0.4459	2.2544	0.5786	-0.7786	0.8152	-1.8056	-1.3054	-1.1656	-0.34	0.6917	-0.0178	1.164	0.187	0.0788	0.6114	-0.4359	0.2857	0.7101	-0.4854	2.1067	-0.2403	3.0588	-0.1743	0.213	-0.4179	-1.3148	-1.3054	-0.1265	0.4388	-0.3427	0.13	-1.0775	-0.4263
+MAPK8|JNK_pT183_Y185	0.0534	1.7821	0.5515	1.1873	-0.7999	-1.1536	1.8892	0.5076	-1.3095	-0.1926	-0.1027	0.3036	-0.5769	-1.7329	-0.7546	-0.2883	0.0328	0.0086	0.3708	-0.7984	-1.055	1.4388	-0.2695	0.6917	-0.2693	0.7357	-0.2641	0.1748	-0.2602	0.9242	0.275	-1.6129	-0.4678	-2.8008	0.2009	0.238	-0.9211	-0.0309	-0.7144	0.1847	-0.3437	0.611	0.3596	2.6724	1.5254
+MAPK9|JNK2	-0.3892	-0.7863	0.2872	-0.315	0.1974	-0.2251	-0.9745	-2.9921	-0.142	-0.766	-0.0963	0.1225	0.2781	-0.0483	-0.4513	0.6994	0.9422	-0.5015	-0.6301	-0.2678	0.1251	3.1935	-0.3729	0.9793	0.528	1.0494	-0.3844	-0.6108	0.7364	0.1829	0.4748	0.6581	-2.2246	0.4326	0.945	-1.386	-0.1977	-1.9632	0.475	1.1436	1.5253	-0.2691	0.2597	0.8621	-0.1031
+XRCC5|Ku80	0.5513	-0.3614	-0.8292	-1.6396	-1.4763	0.166	0.4075	-2.0398	-0.1328	0.8799	-0.4341	0.2271	0.32	-0.2308	1.2484	0.2263	-0.8911	0.2069	0.0476	1.4444	-0.8744	-0.3111	-1.7629	-1.0143	-0.3966	-0.7159	0.6763	-0.6656	0.7837	-0.0013	-0.044	2.4486	1.8353	0.7814	-0.8891	2.8517	0.4016	0.1048	0.1049	0.0732	0.5273	-0.2765	0.1392	-1.5123	0.046
+LCK|Lck	0.4406	0.6534	1.5801	2.0896	0.8618	0.1198	0.243	1.9399	-1.5913	-0.8708	-1.6442	-0.1637	0.3054	0.5381	0.2912	-1.1018	-0.7907	-1.0505	-0.8758	-0.9706	-0.1698	-1.2954	0.3902	-0.8535	0.409	-0.9724	-0.1844	1.3741	-1.2049	0.4607	1.6701	0.1694	0.1732	-0.2724	0.2818	-0.3396	-1.884	1.2126	-1.5461	0.9916	-0.1353	0.0544	0.8124	1.4157	-0.5606
+STK11|LKB1	-0.0983	-2.3039	1.6341	0.7084	-1.4026	-0.3925	-2.2532	0.649	-1.1757	1.401	-0.8868	-0.7874	-0.2459	0.1013	0.2348	-0.3038	0.8642	-0.9075	0.186	-1.2196	1.5198	-0.7874	1.4365	-0.7874	1.7366	0.5514	-0.5753	-0.3999	0.8651	-0.2202	-0.0099	-0.8832	1.2002	0.5697	0.839	1.8519	-0.5056	0.8122	-0.6825	0.3598	0.0494	0.1749	-0.0336	0.5574	-1.4403
+MAPK1 MAPK3|MAPK_pT202_Y204	0.0685	0.6145	-0.2604	0.6518	-0.4556	-0.4558	1.3763	4.7123	0.0895	-0.4708	0.3298	-0.2388	0.8293	-0.8454	-0.6999	-0.395	0.051	1.0341	-1.2374	0.533	-0.8256	1.7131	1.644	-0.99	-0.1509	-0.9577	-0.0897	-0.5609	0.1291	0.4434	-0.1355	-0.7855	-0.68	-1.2147	-0.2074	-1.0934	-0.0485	-0.6083	-0.4729	0.419	-0.6712	0.5316	-0.4053	-0.1139	-0.1004
+MAP2K1|MEK1	0.4623	-0.9164	0.3764	-0.8141	-1.3283	0.0739	0.2031	0.67	1.2139	0.008	0.8243	-2.1841	2.1506	-0.0422	-0.16	-0.5878	0.8075	0.9924	-1.4929	0.3597	-0.0679	0.6968	1.286	0.0918	0.874	0.4134	-0.2656	-1.7955	1.4526	-0.0303	-0.8681	0.5346	-2.7304	0.2783	1.0599	-0.5064	1.5104	-1.9628	-0.1955	-0.0471	-0.5691	-0.03	0.0602	0.1056	0.0891
+MAP2K1|MEK1_pS217_S221	0.741	-2.023	-0.2258	2.1404	-0.5711	-1.089	-1.7715	3.4921	-0.4953	0.3958	-1.0042	0.0314	-0.2425	0.2485	0.5764	-0.7752	-0.3778	-0.6594	-0.6515	0.6103	1.1084	0.3374	2.1003	-0.5456	-0.2069	-0.4591	-1.0318	0.0358	0.1908	-0.2129	0.1101	-0.627	0.9087	-1.1828	0.1364	0.8942	-0.5305	0.9129	-0.1651	0.7329	-0.7238	0.8447	0.3065	-0.2499	-1.0335
+ERRFI1|MIG-6	0.5935	1.5432	-1.0436	-0.8471	0.2603	0.9072	1.0465	-3.4977	-0.2127	1.5203	-1.1379	0.8233	-0.7611	0.3022	-0.3629	0.8917	0.5554	-0.1437	2.1753	-0.3209	0.1874	-0.9062	-1.931	-0.9928	-0.3031	-0.0426	1.0381	-0.4271	-0.1276	0.7187	-0.9273	-0.3136	0.8237	0.3305	-0.4596	1.2707	-0.0659	1.0817	0.6159	-0.5154	0.4079	-0.2182	-0.8707	0.4119	-1.0766
+MRE11A|Mre11	0.8614	0.2456	1.382	2.1053	-0.1014	-0.6071	1.2571	0.5151	-1.5827	-0.2046	-0.8149	-0.4599	0.3	-0.3112	0.2756	-0.4426	-0.1076	-1.2709	-1.0693	-1.4964	0.5973	-1.1139	2.1879	-1.6663	1.2569	-0.6368	-0.1738	-0.4038	-0.1275	0.4818	0.6248	-0.5832	1.3512	-1.6536	0.2603	1.4218	-1.344	1.3185	-0.7454	0.9816	-0.7352	1.0477	-0.3851	0.4261	-0.8608
+MTOR|mTOR	-0.1082	-2.6438	-0.9677	-1.3486	0.2748	1.7968	-1.5676	-0.0563	-0.1883	1.6519	0.9222	0.683	-0.1259	-0.7336	1.564	0.3452	0.2459	0.3897	1.7194	-0.0211	1.1348	0.446	-1.8745	-2.2587	0.3068	0.9924	-0.6024	0.3238	0.6222	-0.8254	-0.1918	0.4016	1.5881	-0.3632	0.5268	0.429	-0.0703	-0.9335	-1.0376	0.142	0.7317	-0.6253	-0.3339	-0.1408	-0.2196
+MTOR|mTOR_pS2448	-1.0194	0.2486	-1.0514	-0.7811	0.6323	0.8572	0.9838	-0.2059	0.9014	-0.6458	0.7887	2.3599	-0.4617	-1.1139	0.042	0.8522	-0.6119	0.7263	-1.4023	0.2511	-1.1685	2.1382	-0.9879	-0.9576	-0.055	0.342	1.2578	0.8415	-0.7205	0.7734	1.0987	-0.1678	-0.9253	0.2487	0.1875	-2.2701	-0.8452	-1.8223	-0.1882	2.0069	-0.196	-0.6737	0.3707	0.1078	0.2549
+CDH2|N-Cadherin	-0.2559	0.1285	-0.288	1.4951	1.1794	-0.5715	-0.2573	0.3877	-1.4804	-0.6831	-1.5667	0.9656	2.0614	0.6548	-0.0488	-0.9245	0.0024	-1.9349	1.9739	1.1021	-0.6044	0.807	1.2341	-2.011	0.0578	-0.4379	0.9167	0.6008	-1.3302	0.2568	1.5445	0.2102	-0.0324	0.6862	-0.0939	0.0513	-1.6854	-0.4201	-1.9202	0.7611	-0.176	0.2003	-0.2559	-0.2857	-0.0135
+NFKB1|NF-kB-p65_pS536	0.1827	0.4936	-1.165	1.6401	0.1877	0.0571	0.1065	0.7683	0.7913	-0.7341	1.3307	-0.4956	-0.3058	-1.1353	-1.0117	-0.3502	-0.5956	-0.7041	0.5101	-0.8028	-1.4335	0.8279	0.4251	-0.7992	-0.8186	0.8715	0.4102	0.2909	-0.9298	-0.1723	0.6586	-1.405	-0.9781	2.3149	-0.0198	-0.53	-1.1315	0.2824	-1.5942	-0.1695	-0.7607	2.5457	-0.2273	1.7922	1.7822
+NF2|NF2	-0.349	-0.0424	-0.641	-0.6529	-1.3296	-0.0424	-0.8234	-0.9085	-0.0653	-0.8285	-1.766	0.3452	-2.357	0.5509	1.8279	0.3818	0.2954	-0.4355	1.878	-1.1246	0.0816	-0.1036	-0.9426	-1.0035	-0.1938	-0.0424	0.0746	0.6536	0.5326	0.2638	1.5716	1.9027	2.3352	1.2002	-0.9945	0.5088	-0.2669	-0.2299	-0.6398	0.9747	-0.2422	-0.1253	0.1933	-1.0689	1.6479
+NOTCH1|Notch1	0.1776	0.5072	0.6101	0.7162	-0.4608	-0.9333	1.4162	1.5409	0.3125	0.9568	-0.8066	-1.0421	-0.9002	-1.3397	-0.1243	0.0341	-0.3432	-0.9969	-1.2814	-1.965	-0.2685	-0.3753	-0.446	-0.9642	1.5764	-0.1798	0.2956	-0.7541	0.495	0.5551	0.6522	0.1107	-0.6526	-0.623	-0.0864	0.1405	-0.3882	-0.6265	-1.2928	0.2239	-0.3029	3.3066	2.2075	-0.0466	1.3651
+CDH3|P-Cadherin	0.2299	1.4863	3.0409	0.0364	0.0872	-0.0207	2.0965	-2.127	-0.711	-0.5311	0.1992	-0.2911	1.9596	0.6001	-0.7819	-0.1971	0.3343	-0.7359	2.33	-1.0335	-0.2595	-0.7667	-0.2174	-1.4463	0.42	-1.1018	0.2118	-0.1892	-0.1853	1.0606	-0.0787	-0.3673	-0.41	-1.0466	-0.0834	-0.1998	-0.7681	1.3364	-1.0756	0.5492	0.2919	-0.2403	-0.7276	-0.2022	-0.4752
+CDKN1B|p27	0.6707	-0.4515	0.6325	-0.6394	-0.1647	-1.2503	-0.2994	-2.2257	-0.9566	-0.4551	-0.0475	0.2126	-1.2247	1.133	0.023	-0.6038	1.0499	-0.342	0.4142	-2.1616	3.7048	-0.893	-0.3325	-0.0101	-0.497	-0.1143	0.9383	1.0599	0.8683	-0.6492	2.2883	0.0363	-0.1161	0.0529	-0.4645	0.5674	-0.533	0.4619	-0.8216	-0.365	0.3184	0.2598	-0.4237	0.8896	0.4606
+CDKN1B|p27_pT157	0.6423	1.5264	1.7663	1.7352	0.256	-0.3075	2.6788	-2.4408	-0.7422	0.6391	-0.5268	0.1311	-0.144	-0.1177	0.2653	-0.3901	1.1792	-0.8625	-1.0621	-0.9472	0.7786	-1.0439	-0.1087	-1.327	0.3626	-0.9551	1.1529	-0.4826	0.3879	1.635	0.1378	-0.2036	0.224	-1.7795	-0.5585	-0.3572	-0.5701	-0.4773	-0.5695	1.1171	-0.0821	1.0895	-0.9789	-0.1842	-0.4859
+MAPK14|p38_MAPK	1.5216	-2.018	1.2759	-0.3611	-0.883	-0.553	-1.624	-0.5853	0.144	0.6488	-0.2866	-0.1456	-1.844	-0.8125	2.7216	-0.8533	-1.143	0.3513	1.0968	1.3227	-0.4598	-0.0806	-0.7713	0.987	0.674	-0.8954	-0.0666	0.5512	0.0451	-1.8445	0.3293	-0.6471	1.4016	-0.6017	1.4552	-0.6561	-0.0566	1.0004	-0.2784	-0.0289	0.0668	0.6249	0.3013	-0.3666	1.3437
+MAPK14|p38_pT180_Y182	-1.0072	-0.242	-0.8146	0.6445	-0.1466	0.5898	-0.5277	1.4618	0.17	-0.4637	-0.2525	1.4501	-0.9603	-1.9933	2.9549	-0.0974	-1.0743	1.0643	0.4728	0.7797	-1.6	1.3743	-0.3355	1.2767	-1.247	0.717	0.4602	0.0731	-1.1732	-0.648	0.3603	-1.5217	-0.5961	0.4732	-0.779	-1.2096	0.6313	-0.3653	0.7296	-0.2987	-0.9911	-0.373	0.6617	1.1479	1.2244
+TP53|p53	0.1123	2.2997	1.21	0.0921	0.3771	0.2016	2.8755	-2.222	-0.8833	-0.1654	0.2942	0.3466	-0.104	-1.1518	-0.9299	0.2317	1.0449	-0.66	-0.9616	-1.6709	0.103	-0.6529	-0.9468	-1.4077	0.7305	-0.4617	1.0666	0.2703	0.1403	1.8187	0.2634	-0.7131	0.0467	-1.7346	0.0112	0.0879	0.2497	0.0085	-1.3783	1.1301	0.263	0.638	-0.4317	0.4638	0.0983
+RPS6KB1|p70S6K	0.0935	-2.5441	0.1089	-0.7539	-0.3313	0.6877	-1.4462	-0.224	0.8451	1.1423	0.0506	-0.7816	-1.1737	-0.9339	1.6448	-0.2967	1.8498	-0.3906	1.3093	1.1025	-0.6763	-0.5576	0.0711	-0.5795	-0.1256	2.1524	-0.8491	0.4772	1.6756	-0.7056	-0.9625	-0.5419	1.1765	0.5812	2.0321	-0.1945	0.1664	-0.1033	0.8638	-0.2999	-0.1184	-0.7005	-0.8932	-1.0484	-0.7982
+RPS6KB1|p70S6K_pT389	-0.357	1.7385	0.5303	0.062	1.7831	0.0894	2.3871	-0.613	-0.9304	-0.694	-0.0178	1.8928	-0.3001	-1.9962	-0.8407	-0.0256	1.1108	0.1025	-1.5358	-1.222	-0.0942	-0.4454	-0.1104	-1.3055	0.1502	0.9489	0.4873	1.2612	-0.0772	1.5131	0.3435	-1.0486	-0.0163	-0.8313	-0.0805	-1.4475	-1.1888	0.6225	-1.1117	0.9849	0.4453	1.2186	-0.76	-0.4733	-0.1484
+RPS6KA1|p90RSK_pT359_S363	0.3973	1.4752	0.1501	1.6046	-0.1389	-0.0105	1.9371	0.3293	0.3949	1.6909	0.4799	-0.0212	0.7761	-1.2056	-0.9911	0.1321	-0.5811	-0.7853	-1.3254	-1.0454	-1.5385	0.1249	0.9168	-1.6844	0.5252	-1.2335	-0.2578	0.3572	-0.1463	0.7912	0.8121	-0.3393	0.0855	-1.8356	-0.5423	-0.4565	-1.0478	1.2076	-1.0192	2.7107	-0.8436	0.9136	-0.4286	-0.1345	-0.1997
+SERPINE1|PAI-1	-0.3942	-0.6112	-0.5628	-0.1045	-0.94	-0.9145	-0.0669	1.4472	0.5251	-0.838	-0.3446	-1.0784	3.1273	-0.0018	0.1557	1.4427	-0.2423	1.7895	1.4469	0.1216	-0.874	-0.8145	2.4005	0.3032	-0.6035	-1.1039	0.0331	-0.9059	-0.4656	-0.2818	-0.8575	0.5724	-0.6804	-0.5951	-0.3447	1.4662	-0.5664	-0.2938	1.7544	0.6036	-0.6053	-0.8705	-0.8092	0.4847	-0.903
+PXN|Paxillin	-0.5447	-1.1376	0.5439	-0.3083	0.2289	-0.732	-1.2507	0.2243	1.539	-1.2277	0.1919	0.5927	0.2795	-1.5787	-0.5717	-0.5839	0.6893	0.5519	0.7379	1.1472	1.0205	-0.7214	-0.6804	-0.8552	-0.6891	0.0233	-0.3884	0.4375	0.6754	0.2667	0.0343	-1.3249	-1.3308	0.3016	3.3083	-0.8258	-1.9741	-1.2859	1.0317	0.157	1.4953	1.0608	0.9813	0.593	-0.1019
+PCNA|PCNA	-0.6912	0.365	1.3551	-0.6095	-0.4096	-0.2894	0.641	-1.8271	-0.4914	-0.5327	-0.6145	-0.3222	0.3918	1.3271	-0.4862	0.4619	0.8253	0.2015	-0.9912	-1.2592	1.5192	-1.0829	-1.363	-0.0067	0.6324	-0.8106	0.2547	-0.4816	0.2178	0.9881	-0.8087	0.3531	1.2262	-1.5815	0.8447	3.19	-0.0974	-1.0431	-0.2995	0.5246	1.8577	-0.0813	0.4776	0.2363	-1.7107
+PDK1|PDK1_pS241	-0.1315	-1.5627	0.7605	-0.4553	1.2887	0.9085	-1.9687	-1.2677	1.0471	-0.1105	-2.5449	1.5028	-2.0711	-0.4535	0.4749	0.8765	0.7793	-0.3308	-0.0639	-0.1203	0.8932	0.1512	-0.7395	1.5787	-0.2963	-0.5849	-0.9525	-0.3102	-0.3564	-0.4011	-1.1721	-1.5707	0.7608	1.2964	0.2428	0.3898	0.7883	0.8538	1.033	0.128	1.6065	0.3776	-0.3715	0.5617	-0.4639
+PEA15|PEA15	1.7189	-0.7672	0.2017	-0.0126	-0.7402	-0.7755	-1.078	-0.1662	-0.5253	-0.3515	-0.3753	-0.0258	0.9396	2.0792	1.7486	0.0343	-0.7063	-0.1403	0.8744	0.4558	-0.0216	-0.8817	0.3651	-0.8364	-1.0802	-0.3534	0.485	-0.2261	-0.4788	-0.7809	-0.5415	0.8068	0.1857	4.1331	-0.4409	0.0466	0.3948	-1.1101	0.9935	-0.1903	-0.1839	-1.0857	0.5914	-1.3603	-0.8187
+PIK3CA |PI3K-p110-alpha	0.587	-0.6836	0.0234	-1.2448	0.0429	0.7818	-0.9313	-1.3164	-0.5461	1.8294	0.6715	-1.2042	-1.7942	0.4302	0.4199	0.8763	0.0242	0.3067	-1.5516	0.2611	1.1293	0.0283	-1.3299	2.9006	1.5091	1.6364	0.4778	0.4287	-1.0939	-0.3282	-0.4565	-0.5317	1.4109	0.3052	-0.2116	0.0239	-0.5585	0.1007	-0.2703	-1.2935	0.0843	0.3964	0.7731	-1.814	-0.299
+PRKCA |PKC-alpha	-1.0481	0.1401	0.565	0.4095	2.193	0.5296	0.7295	-0.7925	-0.6052	-0.4954	-0.1334	2.0318	-0.1303	-0.5578	-1.1246	-0.192	1.6708	0.7171	-1.0764	-1.6683	1.8286	-0.7178	-0.3153	-1.2431	-0.886	1.7541	-0.6095	1.7462	-0.4743	0.7095	-0.5311	-1.1383	-0.4297	0.6338	0.0573	-1.6119	-1.1023	0.6128	-0.5889	0.1996	1.1053	1.1044	-0.8447	-0.276	-0.1451
+PRKCA |PKC-alpha_pS657	-1.5632	-0.0723	0.4742	0.2471	1.624	0.7886	0.8118	-0.311	-0.2592	-0.665	0.0041	1.5363	-0.2867	-1.2073	-1.2895	0.0266	1.3057	0.9649	-0.9692	-2.0757	0.8827	-0.4659	0.08	-0.9192	-1.2716	1.6359	-0.6519	1.6798	-0.4949	0.7839	-0.207	-1.3673	0.0321	1.1677	0.2673	-2.0257	-1.2846	1.0555	-0.263	0.3147	1.1121	1.3634	-0.7316	0.0541	0.1694
+PRKCD|PKC-delta_pS664	-0.2748	0.0591	0.476	-0.1776	2.5128	0.2869	1.0724	-1.2586	-0.6234	-0.0722	-0.6303	2.2113	-0.3358	-1.0941	-0.411	0.0018	1.5483	0.6907	-1.1223	-1.1038	0.4162	-0.1617	-0.8817	-0.8297	-0.9036	2.0285	-0.0785	2.0404	-1.0075	0.5403	-0.3724	-1.4597	0.0232	0.4694	0.0403	-1.5833	-1.2662	0.4523	-0.667	0.3745	0.8169	1.3675	-0.8883	0.2069	-0.4319
+PGR|PR	0.6908	1.1989	1.4456	0.3122	0.06	-0.4179	2.0654	-2.3191	-1.0652	0.5994	-0.1848	-0.4451	-0.3615	-0.712	-0.1967	-0.1897	0.7126	-1.0466	-1.0	-0.7392	0.6986	-0.6585	-0.534	-1.2846	0.5499	-0.921	0.3821	0.2936	0.3523	1.0586	0.1685	-0.4781	3.2271	-2.1445	0.1636	-0.1243	-0.1663	1.3718	-0.9082	0.9843	0.2689	0.4753	-0.2531	-0.1535	-0.7757
+AKT1S1|PRAS40_pT246	-1.0374	-1.3388	-1.0021	0.2933	0.6339	1.0195	-1.0618	-0.113	1.4664	0.466	-0.1825	2.8723	-2.2449	-1.0862	-0.1944	0.5192	-0.36	0.367	0.064	0.6462	-0.1475	0.3141	-0.6864	1.2949	-1.8033	0.8514	0.5852	-0.5006	-0.8853	-1.588	-0.4996	-0.9405	-0.3692	0.3773	-0.3164	0.1263	0.9014	0.1268	1.0351	-1.0238	0.2508	-0.2449	0.0372	1.9578	1.4205
+PTEN|PTEN	0.8723	-1.1741	-0.7416	-0.2315	-0.6347	2.6844	-1.1059	0.1089	0.735	2.0988	0.9705	-0.9216	-1.6429	-1.2157	1.0674	0.7225	-0.6695	-0.4131	-0.8238	-0.1188	-0.9537	1.2819	-1.3498	0.0546	1.1026	0.8873	0.9843	-0.4568	-0.5568	-0.7697	-0.7845	0.1024	0.3198	1.0083	0.2078	0.0226	0.8589	-0.319	0.4946	-1.9619	-0.6794	-0.299	1.2689	-1.0596	1.0296
+RAD50|Rad50	-0.3442	-1.6999	-0.4384	-0.4122	-0.2907	-2.6923	-2.1705	-1.2476	0.858	0.1741	-0.024	-1.2052	1.7065	0.1747	-0.2215	-0.7742	0.0609	0.5616	1.5399	1.3253	1.2031	-0.666	-0.7514	-0.0441	-0.242	-0.8205	0.2593	-0.165	-0.1203	-0.8286	-0.8615	1.0373	1.0104	-0.1874	-0.0535	1.2887	0.2068	1.4057	0.8114	0.5372	2.2375	-0.8125	0.0784	0.7636	-0.1669
+RAD51|Rad51	0.8352	0.8423	-0.6513	1.5972	-0.2224	-0.5035	1.0784	1.7831	-1.3699	-0.2046	-0.9903	-0.0924	0.8221	-1.6332	-0.6748	-0.7616	-0.1786	-0.8476	-0.6218	-0.7422	-1.0938	-1.4333	2.1233	-1.3966	0.8172	-0.1375	-0.6242	0.6656	0.1548	0.2961	1.1342	-0.5855	0.4382	-1.4423	0.4242	1.1584	-1.6436	1.7317	-1.0768	0.8592	-0.6114	1.1843	0.4491	0.5327	0.612
+RB1|Rb_pS807_S811	-0.7068	0.2027	1.2395	0.0802	-0.0005	-0.0714	0.4178	2.1114	-0.0755	-0.302	0.1585	0.055	0.7108	-2.0564	-0.3833	0.8294	-0.5512	1.6962	3.1971	-0.1344	-0.7497	-0.7447	0.6875	0.0049	-1.073	2.0584	0.4405	-0.5699	-1.1907	-0.2676	-0.4878	-1.0651	-0.412	-1.3063	-0.6682	-1.0517	1.9472	0.4654	-0.3797	-0.2651	-0.4426	0.2454	-0.6201	-0.3421	-0.6303
+RPS6|S6	-0.2218	-2.9658	-0.1699	-1.2267	-0.4007	1.5485	-1.3114	0.042	1.0935	0.2257	0.0508	0.2137	-2.3519	1.3436	0.8882	0.5284	-0.5057	0.9054	-0.2382	0.6501	0.3417	0.4267	-1.1383	2.4067	0.3304	0.2593	0.2842	-0.4053	0.3425	-0.6489	-0.7285	0.4208	1.9761	-0.1886	0.8768	0.8977	-0.1194	-0.4364	0.3539	-0.424	0.1824	-0.3905	-0.0027	-1.0958	-1.619
+RPS6|S6_pS235_S236	-0.6635	0.0018	-0.9832	0.0248	-0.4916	-0.1402	1.0969	2.4992	2.462	-0.2224	0.6205	1.1141	0.1662	0.5374	0.4978	0.2443	-0.9901	1.6825	-0.4545	-0.5341	-1.1057	-0.2226	-0.3944	0.6974	-0.9897	-1.0735	0.7472	0.0854	-1.6606	0.0693	-0.3809	-1.3361	-1.1112	1.3919	2.0855	0.0092	-1.0897	-1.6337	0.0028	0.7865	-0.6117	-0.4827	0.7806	-0.8062	-0.225
+RPS6|S6_pS240_S244	-0.7604	-0.0349	-1.3105	-0.1486	-0.0522	0.3872	1.0927	1.8517	1.7814	-0.6393	0.6826	1.9628	-0.1416	0.5129	0.4176	0.2882	-1.0564	2.1117	-1.383	-0.3014	0.0057	-0.1015	-0.4703	1.1842	-1.1237	-0.2859	0.5147	-0.4064	-1.722	-0.0176	-0.4158	-1.1295	-0.6138	0.1519	2.6944	-0.7339	-0.9911	-1.4813	0.1358	0.925	-0.1432	-0.7096	0.4185	-1.0507	0.1058
+SHC1|Shc_pY317	0.8534	0.9911	1.3464	-0.7488	-0.6797	1.4081	1.4618	-1.6587	-0.7009	0.0066	0.5438	-0.4374	-1.0561	-0.5957	0.376	0.0036	0.0661	0.1972	-1.0444	0.253	-0.2316	0.1218	-1.5396	-1.5772	0.6336	-1.7929	0.8187	0.6148	-0.07	1.3413	-0.7557	0.3552	0.2369	3.6824	-0.6506	-0.989	0.0037	-1.1157	-0.4933	0.4749	0.6371	0.5089	-0.5049	-0.0783	-0.216
+SMAD1|Smad1	0.6049	-0.8168	0.7707	0.3389	-0.4673	-0.6686	-0.6038	0.8716	-0.9719	2.8833	-1.2652	-0.2031	-2.1083	-0.9385	0.2104	-0.5887	-0.6357	-0.6481	0.7937	-1.3096	0.5632	-0.0028	-1.3673	-0.0038	0.1527	-0.1862	0.347	1.1076	1.3233	0.0179	-0.1997	0.144	1.3225	-1.2544	-0.1945	2.2183	-0.8836	1.2064	-0.9419	-0.1924	-0.2989	0.5412	0.9603	-1.1293	1.5025
+SMAD3|Smad3	0.5289	-1.786	0.5145	1.9122	0.378	-1.1416	-2.7801	-0.5152	-1.0397	1.1119	-1.0543	-0.4181	0.2414	0.7345	-0.1043	-0.8281	-0.5214	-0.9719	-0.0923	0.592	1.971	-0.2511	0.9096	-0.4935	-0.2165	-0.9239	-0.9774	-0.2478	0.7976	0.4299	1.5553	1.1678	1.3279	0.7175	0.4572	1.8484	-1.0759	-0.0813	-0.7305	-0.7634	0.3816	0.8387	0.0686	-0.6007	-0.8696
+SMAD4|Smad4	0.9269	2.2616	1.032	1.254	-0.2638	-0.5508	2.2225	-2.1547	-1.2316	0.5534	-0.2486	0.1364	0.1557	-1.397	-0.2994	0.1167	1.3093	-0.4486	0.048	-0.9576	0.0128	-0.9267	-0.9982	-2.2825	0.9576	-1.2036	0.6318	0.0961	0.3083	2.2178	-0.4218	-0.5595	0.2141	-0.983	-0.365	0.2057	-0.4923	0.3058	-0.2997	1.3105	-0.2105	-0.1948	-0.5498	0.7461	0.0167
+SRC|Src	0.9458	-1.2139	-0.4755	-0.6988	-0.6041	-0.7578	-1.7722	-1.3793	-0.1971	1.4781	-1.3469	-0.7118	-1.4823	1.6081	0.7003	0.9628	-1.3365	-1.8589	-1.2957	-0.3508	0.6949	-0.1459	0.534	-0.1657	0.4858	0.5897	-0.3065	0.8848	0.232	-0.0753	-0.5862	0.1867	0.9857	1.1957	2.0301	1.9125	0.2782	1.6366	-0.4525	-0.5114	0.1758	-1.1481	0.5212	0.5904	0.2441
+SRC|Src_pY416	-0.5981	0.8894	0.2452	-0.2252	-0.4014	-0.1434	1.4435	0.0589	-0.448	-0.9507	-0.854	-0.0395	-0.3931	-0.2254	-0.4861	0.5445	-0.2329	0.398	-1.4548	-0.6046	-0.2929	-0.2628	-0.3704	-0.6759	0.0003	-0.7758	-0.047	-0.6575	-0.1468	0.4629	-0.1999	0.4264	-0.2045	-0.6765	-0.867	-0.7008	-0.1731	0.0068	0.4654	0.593	-0.4534	0.9473	-0.4613	2.8026	4.7381
+SRC|Src_pY527	-0.1747	0.1797	-1.2373	-1.3143	-0.293	1.7256	-0.0931	2.0924	-0.4379	0.0318	0.029	-0.0965	-1.0049	-0.0082	1.4934	-0.0086	-1.3912	-0.5406	-1.6731	1.1749	-1.7481	0.6477	0.4116	0.4772	-1.468	0.0668	0.6449	0.6315	-0.2873	-1.0178	-0.0123	-0.3497	-0.0973	0.0813	-0.8351	-0.4194	0.5	0.9083	0.1496	0.0366	-1.4634	-0.3016	0.649	1.1175	3.2248
+STAT3|STAT3_pY705	1.6534	0.3182	0.5691	1.7571	-0.7338	-0.3355	1.1827	0.3136	1.2327	2.1205	-1.1229	0.6243	-0.3253	-1.9257	1.07	0.041	-0.6386	0.4049	1.9106	-0.2543	-2.1981	-1.0285	-1.07	-1.1592	-1.3662	-0.5335	0.9129	-0.5342	-1.432	-0.195	0.4173	-0.3176	-0.8855	-0.3637	-0.2826	-0.7979	-0.1518	-0.0955	0.2654	0.3483	-0.7515	0.3733	1.2018	0.6816	1.1001
+STAT5A|STAT5-alpha	0.5714	0.2488	1.8522	0.5846	0.9258	-0.3856	-0.1383	-0.245	-0.5325	0.4792	-0.4298	0.2607	-1.7577	-1.6394	1.1319	-0.4838	0.2791	-0.9354	-2.5578	0.0804	1.4688	-0.301	-1.2718	-0.0484	-0.2628	0.8831	0.4226	1.627	-1.4056	-0.1394	0.45	0.1887	-1.7214	1.3293	0.6595	1.7487	-1.5792	0.1575	-0.9652	0.9385	-0.0925	0.4812	-0.1018	-0.7782	1.004
+STMN1|Stathmin	1.0483	-0.3802	0.8625	2.4357	-0.3583	-0.9464	-0.4502	1.2308	-0.8556	0.1957	-0.4052	-0.5234	0.5326	0.0886	-0.3674	-1.4223	-0.3995	-0.9916	-0.9158	-0.7288	0.757	-1.7834	1.8489	-0.584	0.5597	-0.5842	-1.1225	-0.2391	0.3936	0.1146	0.3895	0.0192	2.118	-1.6578	0.622	1.8064	-0.7477	1.0257	-1.0472	0.4937	-0.9061	1.0987	0.6838	0.4456	-1.3538
+SYK|Syk	-0.4136	0.357	1.9168	1.6579	0.2392	-0.9819	-0.1639	1.9055	-0.4741	-0.8816	-0.6637	-0.4473	0.2811	-1.3268	0.9433	-0.8713	-0.5851	-1.001	3.6614	-0.2382	-0.7978	-0.3792	-0.1727	-1.1955	-0.53	-0.9852	0.2908	0.9742	-1.1685	0.0306	1.4305	-0.0015	-1.363	-0.0884	-0.3293	-0.8575	-0.5426	-0.2241	0.2027	0.1896	0.0875	1.0601	1.1825	0.2521	0.0211
+TSC2|Tuberin	0.7191	-2.3899	1.0364	-1.2571	-0.5915	1.5512	-1.8033	0.0361	0.334	1.5999	0.4682	-0.9603	-1.1767	-1.6984	1.234	1.1477	0.3355	0.9987	0.1558	0.0739	-0.0073	0.2713	-2.1518	1.5466	0.4291	0.6558	-0.028	-0.0191	-0.4199	-0.9907	-1.1437	0.0255	0.7392	1.5617	-0.246	1.1724	0.8078	-0.2292	-0.645	-0.7101	-0.2565	0.6144	0.2626	-1.1411	0.0887
+KDR|VEGFR2	-0.3451	-1.5556	-1.0388	-1.0503	-0.1567	-1.2843	0.8724	-0.7488	0.1924	-1.2882	0.3664	-0.1387	0.9753	1.4634	-0.0135	-0.554	0.2221	1.6972	1.9669	0.125	-0.1219	-0.5016	-1.1657	1.2594	-0.0189	0.7217	1.3356	-0.9833	-2.1101	-0.8811	-0.3573	0.5198	-1.9929	1.4354	-0.8195	0.5322	-0.7392	0.3562	0.074	-0.5621	1.2715	0.0889	0.6065	0.7341	1.6113
+XRCC1|XRCC1	0.4915	0.5521	1.5309	-0.2362	-0.0398	-0.4315	1.7467	-2.8342	-1.2075	1.7395	-0.993	-0.5248	0.6067	-1.0356	-0.2869	0.3723	0.088	-0.1601	-0.2779	-0.772	0.2849	-1.913	-1.1433	-0.762	0.8022	-1.2598	0.0825	-0.1276	0.1156	1.0711	0.0839	0.3783	1.5724	-1.0446	0.6394	2.456	-0.1828	0.6057	-0.6744	0.9983	0.5603	0.3085	0.1	-0.2026	-1.0772
+YAP1|YAP	0.7067	-0.2417	0.9414	2.6487	-1.2233	-0.4964	-0.2623	1.8765	0.6474	-0.6336	0.3487	-1.2515	0.4374	0.6742	0.5991	-0.8007	0.1012	-1.1395	-0.0337	0.4609	0.8595	-1.7747	1.5307	-1.7408	-0.2677	-1.6009	0.8526	-1.1205	0.7668	0.7061	-1.4868	-0.4554	1.5679	1.3634	-0.4943	0.3417	0.5741	-0.1546	0.2962	-0.4125	-0.8007	-1.3783	-0.144	0.1388	-0.5263
+YAP1|YAP_pS127	0.9434	-0.2079	-2.0057	0.6134	-1.3773	0.9563	-0.6262	0.287	0.6044	-0.736	0.7293	-0.4838	-0.5683	1.6388	0.3238	-0.8517	-0.9733	0.2212	-0.0571	1.2243	-0.1362	-0.106	1.231	0.4916	-2.5349	0.0778	1.9486	-0.4589	0.1352	-0.4542	-0.8147	-0.8267	0.8174	1.0162	-0.6642	-0.575	1.6915	0.0455	0.9827	-1.9548	-0.4283	-1.2646	0.4015	0.1486	1.5764
+YBX1|YB-1	-0.4464	-0.473	-0.1761	-0.7494	0.2577	-0.015	-2.6027	-1.6572	-0.6075	1.181	-0.5728	-0.9444	0.8677	0.8314	-0.458	-0.535	0.4324	-0.2197	-1.1837	0.841	1.9882	1.5758	0.9546	0.3435	0.3189	-1.2073	-0.9216	-0.2676	0.4182	1.0669	0.0457	0.7301	-0.398	0.0184	-0.4271	2.3306	1.2992	-1.1211	-0.1313	-2.1318	1.033	-0.4837	0.4205	0.7603	0.0152
+YBX1|YB-1_pS102	-0.2691	-0.7586	-0.318	2.2704	1.3163	0.0312	-0.588	2.9831	1.3002	0.8501	-0.2669	2.76	-0.4847	-0.845	-0.0513	0.0574	-1.1492	0.483	-1.322	0.8619	1.6779	-0.4686	0.52	0.0541	-0.5453	0.1677	-0.1681	-0.3952	-1.4785	-0.9351	-0.6756	-0.9313	0.937	-0.9862	-1.0312	-0.5646	-0.4947	-0.4177	0.0414	0.3456	-0.4542	0.053	-0.8992	-0.0882	-0.124
+EIF4EBP1|4E-BP1_pT70	0.6641	-0.4304	-0.7627	2.3682	-0.005	0.3798	-0.4766	1.0593	0.3055	0.165	-0.561	0.149	0.4254	1.4944	-0.1911	-0.9037	-0.7507	-1.1012	-0.382	0.0921	0.2287	-1.6066	3.1583	1.0341	-0.7045	-0.0257	-0.5209	-0.4257	-0.6959	-0.6946	0.162	0.3855	0.9591	-2.8004	-0.3888	0.5537	-0.5402	1.4308	-0.4539	-0.8784	-0.847	0.9639	0.4793	-0.7898	0.4789
+ARAF|A-Raf_pS299	0.0159	0.7733	0.4216	-0.4687	0.9603	-0.7125	0.5228	-0.6208	0.4512	-0.7098	-0.1976	1.0093	-1.0704	-1.3168	-0.9743	0.4445	0.187	-0.4019	-1.4824	-1.3071	3.0585	-0.0214	-1.2641	-0.85	0.6324	0.4994	-0.0627	-0.2242	0.1752	0.6796	0.5283	-1.2534	-0.5357	-0.9238	2.4878	-0.943	0.5024	-0.1174	0.3716	0.2012	0.1006	-0.6644	0.1266	2.7504	-0.7775
+ANXA7|Annexin_VII	1.7028	0.4991	0.3995	0.067	-0.6424	-0.5346	1.7466	-1.5643	0.195	0.6034	0.5398	-1.1845	0.412	1.3954	0.4637	0.7427	0.9506	-0.956	-0.6707	-1.3821	-0.1313	-0.1075	-1.8438	-2.1916	2.0272	-0.6243	1.6533	-0.8129	1.0412	-0.2299	-1.2045	0.4927	-0.3432	0.582	0.1061	-1.3895	0.2465	-0.6796	-0.5627	0.0579	-1.111	0.6246	1.0754	1.0489	-0.5069
+ARID1A|ARID1A	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
+BRAF|B-Raf	-0.3665	-1.187	0.5059	-1.3465	0.4453	-0.804	-1.6377	-0.0636	1.2023	1.3178	-0.5174	0.0879	-0.0121	-0.1303	-0.9206	0.4684	0.9978	0.7796	-1.4358	0.1897	-0.0049	0.385	-1.4597	1.396	1.567	-0.3204	-0.7009	0.0606	1.2024	-0.3449	0.0116	-1.1371	-2.1909	-0.7486	2.7456	-0.8128	0.2487	-0.7622	1.3273	1.1125	0.8576	0.2454	0.2746	-1.0581	0.5331
+BAD|Bad_pS112	-0.7909	-0.4706	-1.1619	0.1761	0.0676	1.2583	0.2536	0.7168	0.3845	0.2787	1.5869	1.5141	-1.4407	0.6269	1.1779	0.6141	-0.6499	1.0976	-0.4836	-0.5646	-1.09	0.4082	-0.3813	0.2224	-2.281	2.0582	1.5666	0.3324	-1.9184	-0.7563	0.347	-0.6123	-0.0017	2.0276	-1.0411	-1.8333	0.6223	-0.3433	0.0661	-0.7605	-0.9244	-0.0369	-0.3998	0.4285	0.1101
+BAP1|Bap1-c-4	0.5933	0.1748	1.1027	-1.3644	-0.2282	1.0378	0.256	-0.3934	-0.577	1.5759	0.7808	-0.1557	-0.7425	0.7739	0.3943	-0.3582	-0.4321	-0.0903	1.7129	0.1199	1.0524	-1.3785	-3.282	-0.4004	0.5055	-0.9491	0.2041	-0.6215	0.5888	0.2905	-1.0916	1.2692	-0.0024	-1.0866	-0.3562	3.0445	0.2233	0.797	-0.6514	-0.6787	0.1867	-0.3756	-0.8423	-0.6112	-0.0149
+BRCA2|BRCA2	0.9164	1.077	1.0337	1.4144	0.0048	-0.8775	2.4056	-0.0928	-1.2106	0.1911	-1.269	-0.219	1.0575	-0.2337	-1.3364	-0.5374	0.518	-0.2764	-0.5412	-1.1633	-0.1843	-1.5551	0.6402	-2.2498	0.8435	-1.266	0.7597	0.46	0.1581	1.1145	0.484	-0.1423	0.2054	-1.5112	-0.382	1.2169	-1.6819	1.0857	-1.1342	0.9904	-0.4416	0.8243	0.1087	1.1006	-0.3049
+MS4A1|CD20	1.5531	1.6969	0.4127	-0.5109	0.5136	-0.5066	1.7338	-2.2598	-0.9703	1.7416	-0.427	-0.4857	-0.4433	-0.0353	-0.0645	-0.3022	0.2148	-0.7768	-0.8155	0.3425	0.7434	-0.5087	0.1976	-2.2204	-0.2255	-0.4173	0.4306	1.4212	0.128	1.6147	0.0014	0.4786	1.6151	-2.0726	-0.6495	1.1375	-0.6223	0.9451	-0.7923	0.7331	0.0947	-0.0579	-0.9726	-0.5442	-1.0688
+CCNE2|Cyclin_E2	0.3336	0.0997	0.1642	-0.8748	-0.0248	-0.2797	-0.2245	-1.104	-0.4058	1.1394	0.2291	-0.3044	-0.2938	0.4806	0.1927	0.1805	-0.0521	-0.1207	0.2958	0.2582	0.9362	-0.2728	-1.1201	0.4821	0.0522	-0.6084	0.2988	0.4788	0.0422	0.3421	-0.6425	1.8282	0.0582	-0.9969	-0.2219	4.278	-0.0694	0.0158	0.1139	0.1377	0.3369	0.108	-3.5465	-0.8307	-0.8892
+ETS1|ETS-1	1.5402	0.4151	0.5489	0.8501	0.6515	-1.1557	-0.7009	-0.5131	-1.5054	0.4458	-1.1571	-0.1017	1.785	0.5316	-0.4915	-0.2851	-0.3424	-1.4557	-1.1342	0.4392	0.8808	-0.0769	1.7183	-1.6149	-0.4132	-0.6385	-0.5913	0.8364	-0.4106	1.4856	0.9744	1.4473	1.9382	-2.0718	-0.3329	0.1574	-1.2847	0.2424	-1.091	0.8218	0.9822	0.1847	0.0379	-0.419	-1.1271
+EIF4G1|eIF4G	0.9391	-0.2009	1.1611	-1.0662	0.7467	0.6545	-1.3319	0.2326	-0.0216	1.8441	0.2234	-1.6096	-0.1789	-1.2578	0.1651	-1.771	0.1605	0.2328	-0.2424	1.907	1.2044	0.2187	-0.6021	1.3558	1.2856	0.0502	-1.7735	-0.3004	0.992	0.0354	-0.315	-0.7086	-2.394	-0.8589	1.1923	0.8103	0.4444	-1.2327	-0.1792	-1.5424	0.3954	0.7899	0.153	-0.2782	0.6711
+FASN|FASN	-0.1662	-1.1676	-0.6293	-1.4286	-0.4823	2.2629	-0.2923	-1.0102	0.6916	0.567	0.9688	-0.6375	1.2525	0.4272	2.6645	-0.4182	-0.0874	0.7824	-0.7349	1.8024	0.3989	-0.2841	-0.4959	0.2022	-0.3753	-0.2831	0.0648	-0.474	0.8207	-0.9423	-1.5133	-0.4951	1.0051	-1.718	0.7679	0.9137	1.7488	-0.7359	0.8328	0.3197	-0.7015	-1.1486	-0.2484	-1.4348	-0.589
+FOXO3|FOXO3a_pS318_S321	-0.6074	0.7317	-0.8237	-0.0379	-0.6755	1.7835	1.2537	-1.5113	-0.4619	0.5998	0.8395	1.2947	-1.2608	-0.7463	0.044	0.8963	-0.3703	-0.4016	-0.7929	-0.7459	-0.5421	-0.0686	-0.826	-0.414	-0.2623	-0.917	1.036	-0.2223	-1.0674	0.0735	0.0829	-1.2442	2.5743	-0.0291	0.416	-2.518	1.5736	-0.5257	-0.2973	0.3755	-0.169	1.142	0.889	-0.1596	2.0921
+FOXM1|FoxM1	0.8855	1.2623	0.0083	-0.2539	-0.1429	0.6835	1.4767	1.3482	-1.4167	-0.8933	-0.0293	0.2313	-0.302	-1.51	-1.2577	-0.0031	0.1235	1.1724	0.506	-0.7449	-0.8544	-1.3236	-1.07	1.3549	0.0395	-0.2	0.108	-0.6614	-0.4773	0.9896	-0.3785	2.3251	1.301	-1.6938	-0.2386	2.8894	0.3734	-0.5827	-0.9255	0.2943	-0.326	-0.0589	-1.0468	-0.1217	-0.86
+G6PD|G6PD	-0.2876	0.0508	0.5478	1.7355	2.0894	0.8858	-0.1036	-1.4236	-0.5366	0.7136	-0.3945	1.6452	2.5941	1.9178	-0.8375	0.4619	0.3226	-0.742	-1.3092	-0.1687	2.3958	-0.8479	-0.3318	-0.5111	-0.4307	-0.6751	-0.1846	-0.0171	-0.6372	0.001	0.2534	-0.9362	-0.4905	-1.3452	0.1958	-0.3644	-0.953	-0.9574	-0.8313	0.2278	0.3791	-0.3987	-0.6572	1.1308	-1.1754
+GAPDH|GAPDH	-0.3786	-1.1838	-0.0334	-1.2541	-0.2761	-0.468	-1.4636	-1.4618	1.5805	-0.738	0.5359	-0.1865	-0.1761	1.2033	0.0492	0.3138	0.5764	1.356	0.1242	0.2123	1.3714	0.4782	0.4629	-0.8878	0.2624	1.5128	-0.9522	-0.7196	0.5298	-0.3083	-1.1726	0.6525	-0.5832	-0.5993	0.6315	-0.7213	3.3946	-0.9866	1.4625	-0.4654	0.3456	-0.7141	-0.5639	0.9141	-1.6757
+GSK3A GSK3B|GSK3_pS9	-1.0734	-0.4229	-1.0364	-0.1839	0.9401	0.4606	-0.4905	0.8383	0.9803	-0.0184	0.1524	1.5974	-1.1679	-0.3165	1.1516	0.1291	-0.7998	0.9541	-0.8876	1.8991	-1.0997	0.4257	-0.9355	1.6527	-1.7759	1.1541	1.5597	0.3902	-1.3741	-0.9909	-0.0128	-1.4798	-0.4404	0.9212	-1.3858	-1.784	1.111	-0.3728	0.5998	-0.6311	-0.8418	0.6196	0.5846	0.2448	1.1554
+NRG1|Heregulin	-0.0013	0.2584	0.3607	3.7167	-0.6602	-0.7643	1.1056	-1.4686	-0.6807	0.3169	-0.5892	-0.8163	0.3177	-0.2133	-0.5519	-0.4968	0.593	-0.9188	-0.1698	-0.5253	-0.0771	-0.9619	0.0724	-0.9951	0.2841	-0.425	0.2645	-0.4915	0.4218	0.3533	0.1411	-0.109	-0.1348	-1.1509	0.0203	2.9864	-1.1155	2.691	-0.4864	-0.1178	0.2294	-0.3229	0.3676	0.4451	-0.7019
+MYH11|MYH11	2.6456	1.0825	-0.3995	0.2244	-0.8174	0.1372	1.2289	-1.7972	-1.2947	1.243	0.4438	0.2893	-0.6394	-0.8335	0.6869	-0.1235	0.0702	1.3138	-0.3858	-0.8337	-0.9783	-0.0398	-0.2249	-0.301	-0.8565	-0.6405	0.9479	-0.2785	0.7266	1.4488	1.4477	2.0343	0.1753	-1.5265	-0.9656	-1.1509	-1.502	0.2853	-1.0554	-0.5955	0.2189	-0.3625	0.7395	-0.9593	1.172
+MYH9|Myosin-IIa-pS1943	0.5133	-0.9042	-1.1973	0.3197	-1.6176	1.2672	-0.3355	0.4345	-0.0821	-1.4461	-0.8454	0.1959	-0.7217	1.6051	1.2715	-0.084	-0.7456	1.9214	2.0143	0.5554	-0.4124	0.1197	-0.374	0.7456	-0.34	-0.7801	0.1798	-0.0567	0.6064	-0.226	-0.2401	-0.1098	0.8475	-1.4107	-1.5659	-0.5463	0.9085	-1.3001	-0.5394	0.1348	-2.2351	0.4064	1.2228	0.896	1.9503
+NRAS|N-Ras	-0.0175	1.8895	1.836	1.1693	0.5602	-0.0968	2.2592	-1.9393	-0.4963	0.2837	-0.3214	-0.106	0.0551	-0.946	-0.3738	0.0805	1.1807	-0.868	-1.353	-1.7897	0.9491	-0.6966	-0.8138	-1.7501	0.7983	-0.798	0.7984	-0.2357	0.2784	1.8725	0.492	-0.6382	0.2737	-1.0558	0.0117	-1.346	-0.5558	-0.4318	-0.4818	1.5984	0.2989	0.5575	-0.7073	0.5839	-0.0083
+NDRG1|NDRG1_pT346	-1.3103	-0.3102	-1.399	1.3983	0.2432	-0.076	-0.2476	0.5299	1.2272	-1.7233	1.0069	0.071	0.856	-0.4775	-0.6576	-0.1579	-0.5641	2.3392	-0.1565	0.0744	-1.313	-0.0312	1.5904	0.4307	-1.6929	1.5989	0.0161	0.5166	-1.0961	-0.507	-0.4402	-0.0851	-1.5374	-0.1664	-0.7552	-1.5893	1.296	0.3292	2.1018	-0.7845	0.3673	-0.2018	-0.3314	1.2791	0.3394
+CDKN1A|p21	-0.5612	-0.1811	-2.3718	0.7513	0.8688	1.1449	-0.6646	-1.1265	0.9264	-0.3241	-0.9308	0.9813	-0.1345	0.1703	0.6455	1.1899	-1.6435	0.5106	-0.8827	-0.1363	0.8062	-0.0707	1.2914	1.0321	-1.614	1.0351	1.4001	-0.3278	-0.6759	-1.5696	1.1391	-1.4747	-0.158	-0.6232	-1.3967	-1.5054	1.0158	-0.0741	0.6048	0.3581	0.2185	0.755	-0.872	1.492	0.9821
+CDKN1B|p27_pT198	0.8595	0.1856	1.8981	2.0739	-0.3874	-0.06	1.0307	-0.7208	-0.4839	1.911	1.0718	-0.4863	-0.5982	-0.4468	0.6863	-0.8423	0.1174	-0.7909	-0.1048	-0.6282	1.5118	-2.5379	0.7686	-0.5778	1.0248	-1.6366	0.4845	-0.4468	-0.2061	0.5252	-0.6671	0.1743	2.3392	0.0486	-0.6215	0.7649	-0.8895	0.2607	-0.4429	-0.4468	-0.9413	0.1369	-1.023	-0.4468	-1.4401
+RPS6KA1|p90RSK	-0.5213	0.2365	0.9892	-1.1325	-1.1796	-0.4407	0.2836	-1.5802	1.4298	2.0453	0.0809	-0.7577	1.2766	1.2593	1.7518	-0.6978	-0.6168	-0.5436	2.3511	0.1653	-0.9137	1.1139	-2.1574	-0.6112	0.9204	-0.2994	-0.6248	-0.5852	0.2888	-0.2022	-0.2369	1.0862	0.3855	-0.3722	-1.0194	1.0838	0.3988	0.3578	-0.4505	1.2543	-0.909	-0.7967	-0.0504	-1.3083	-0.7516
+PDCD4|PDCD4	-0.7961	-0.5592	-0.3969	-0.3911	-0.4667	-1.1944	-0.3326	0.419	0.6711	0.3607	-0.4689	1.1426	-1.1354	0.0788	1.3273	1.8056	-0.8734	1.5352	0.1454	-1.0669	-0.9211	0.0332	-1.0341	2.1255	-1.65	-0.5798	2.5121	-0.9404	-1.0414	-1.3073	0.7844	0.2386	-0.0292	0.8599	-0.8978	-1.3361	0.272	-1.1354	1.4934	0.6765	0.1789	0.2606	1.0397	-0.031	0.6247
+PDK1|PDK1	0.1504	-1.1	0.6706	-0.4901	0.9993	0.7293	-1.7217	-2.3356	0.7247	-0.2091	-2.5198	0.7263	-0.9358	-0.1215	0.2371	1.0725	1.1483	-0.7857	-0.6303	-0.1879	2.053	-0.0349	-1.0948	1.1978	-0.1419	-0.5386	-0.6774	-0.727	-0.3806	0.8967	-1.2849	-1.1813	0.0048	0.7733	0.4184	0.6783	0.5527	0.2942	0.8377	0.7629	2.1459	0.646	-0.4285	0.5895	-0.7823
+PEA15|PEA15_pS116	-0.6816	-1.3156	-1.1015	-0.0348	0.2937	-0.0163	-1.9802	-0.6295	-1.3298	-0.1238	-0.5608	-0.2448	1.9137	1.7825	0.3222	0.4452	-1.0425	-0.4309	-0.3125	1.1444	-0.3077	2.6365	1.7911	0.0139	-0.8533	-0.2768	-0.1287	0.2368	-0.3184	-0.5879	0.5051	1.48	0.2123	0.8902	-0.6529	1.2277	-0.8857	-0.2413	-0.7045	0.0257	2.1585	-0.6305	-0.0919	-1.4033	-0.192
+PIK3R1 PIK3R2|PI3K-p85	0.8848	-1.1447	0.9507	0.2925	0.4066	-1.0817	-1.4995	0.7232	-0.4577	0.1981	-1.0048	-0.5847	-1.1234	-0.6197	-0.1755	0.8329	0.1835	-0.7323	-1.3249	-1.7172	0.8814	1.0552	-0.4798	2.6174	0.4462	2.1432	0.7775	0.3203	-1.6812	-0.7401	0.3812	-1.1001	-0.3664	1.1147	0.5984	-1.4871	-0.3796	0.7301	0.8017	-1.21	1.1035	-0.1315	1.1356	0.2717	0.1914
+PRKCB|PKC-pan_BetaII_pS660	-0.5985	-0.9022	0.0005	-0.1652	2.0953	-0.0734	-0.1084	-0.37	1.0151	-0.8096	-0.4862	2.3243	-0.4036	-1.0406	1.4265	-0.1198	1.1229	0.9098	-0.4182	-0.5978	-0.1067	0.8443	-0.7555	0.0663	-1.6252	1.9944	-0.0453	1.4084	-1.6946	-0.1773	-0.4896	-1.5028	0.1044	1.5633	-0.1205	-2.2956	0.0914	-0.1097	-0.0057	0.0966	0.5218	0.8168	-0.967	-0.9071	0.4941
+PRDX1|PRDX1	0.835	1.8192	2.0446	0.8019	0.9184	-0.011	1.9996	-2.2874	-0.7755	0.6366	-0.1527	0.1393	-0.1337	0.4781	-1.0282	-0.2487	0.9673	-0.5616	-0.4123	-1.9588	1.3518	-0.4548	-1.1054	-1.6881	0.4559	-0.2093	0.6092	0.1817	-0.3376	1.8733	0.345	-0.38	-0.4064	-1.0584	0.0624	-1.6435	-0.7861	-0.2388	-0.6074	1.1961	0.5663	0.4225	-0.7612	0.023	-0.4803
+RAB11A RAB11B|Rab11	-0.6496	0.9822	-0.2414	2.5622	0.2163	-0.2915	0.5902	-2.5498	-0.8602	-0.4038	-0.3222	-0.0316	1.491	0.3986	0.7713	-0.4104	0.1265	-1.5033	-1.2313	-0.4897	0.2489	-0.1787	2.859	-0.8761	0.3481	-1.0081	0.361	-0.8513	0.1626	0.1326	0.8916	0.2441	-0.7738	-0.8011	0.4041	-0.5748	-1.4021	-0.799	-0.6565	1.1545	0.0722	0.7769	0.021	0.3392	1.7522
+RAB25|Rab25	0.4905	1.9959	1.2512	-0.0206	0.1004	0.1403	3.1103	-2.2414	-1.1417	0.0084	-0.0762	0.1878	-0.1084	-1.0905	-1.119	0.0352	0.473	-0.4053	-0.584	-1.0729	-0.3187	-0.8356	-1.0194	-1.7297	0.5691	-0.7676	0.9749	0.4968	0.5556	1.7858	1.3469	-0.5991	-0.1418	-1.4156	0.1614	-0.8826	-0.5284	0.5184	-0.6715	0.8888	-0.0307	0.5147	-0.0668	0.1281	1.1344
+RPTOR|Raptor	0.4264	-1.5403	-0.0457	-0.7391	0.0845	1.0846	-1.601	-1.1475	-1.1533	1.4853	0.0043	-0.1824	0.4758	-0.318	0.9447	-0.5346	0.0301	-0.788	1.2883	0.0528	0.5801	-0.6568	3.8849	-0.9266	-0.4786	0.2392	-0.9678	-0.0039	0.2014	-0.6098	-0.56	1.4458	2.4873	-0.0913	-0.2987	0.1787	-0.7287	-0.2626	-0.2323	-0.393	0.3611	0.6939	-0.45	-0.6872	-0.552
+RBM15|RBM15	0.1043	-1.4302	-0.9391	-1.1597	-0.4556	1.4347	-1.3035	-0.0105	0.0917	1.5125	0.4512	-0.1875	-1.0531	-1.5141	1.0465	0.3007	-1.2348	0.7787	0.9627	1.3647	-1.0873	-0.0795	-0.8964	1.3253	-0.8472	-0.0918	0.159	-0.205	0.0356	-1.0299	-0.7252	1.2381	2.1417	0.1185	-0.347	2.4659	0.7491	1.5169	0.2302	-1.3346	0.0181	-0.2308	-0.2034	-0.9852	-0.6945
+RICTOR|Rictor	1.9756	-0.1657	0.8229	-0.7767	-0.0689	0.8615	-0.1845	0.0016	-0.6555	1.4184	-0.1146	-0.277	-1.0578	-1.4023	0.9216	-0.1641	-0.0292	0.5041	-0.8885	0.5427	0.0065	1.7297	-2.7857	-0.5598	-0.8184	1.5231	0.3634	0.4132	1.2833	1.2737	0.5916	1.4392	-1.2089	-0.646	0.6419	-1.6173	-0.0863	-0.7518	-1.1167	0.6787	0.097	-1.3236	1.0212	-0.9705	-0.441
+RICTOR|Rictor_pT1135	-0.2733	-1.6699	-0.532	1.8431	0.2006	-0.292	-1.6035	1.2867	0.8345	0.1413	-0.3757	1.4935	0.2377	-0.5363	0.6995	-0.5084	-1.1799	-0.4768	-0.328	0.2479	0.0561	2.3499	3.2685	-0.9847	-0.9868	1.499	-0.5205	0.698	-0.7169	-0.9519	0.5879	-0.1086	-0.8437	-1.1399	-0.5461	-0.8131	-0.0848	-0.369	-0.0565	0.2618	-0.2927	0.8173	-0.1322	0.6827	-0.8829
+SCD1|SCD1	0.1236	1.8746	1.1057	0.0273	0.9141	0.1738	2.0989	-3.3047	-0.5813	0.0022	0.1213	0.7957	0.0231	0.1746	-0.3843	0.3469	1.0738	-0.0742	-1.7691	-0.2147	1.4623	-0.2269	-1.4633	-1.122	0.3889	-0.6981	1.2646	-0.2237	0.0339	1.5021	-0.1642	-0.7971	-0.3266	-1.535	-0.2356	-0.4427	0.5266	-0.7396	-0.9985	1.3335	0.4846	0.2495	-0.8777	0.3952	-0.3177
+SRSF1|SF2	0.687	1.3915	1.4801	-0.6849	-0.3845	-0.6087	1.7807	-1.9138	-1.1462	-0.3735	0.4643	-0.4417	0.7569	-0.8251	-1.1879	0.1645	1.7341	-0.6695	-0.2981	-1.1156	0.8934	-0.5834	1.4547	-2.0339	0.867	-0.9651	0.5479	-0.2243	0.3629	2.212	-0.0487	-0.1426	-0.2007	-1.3867	-0.0942	-0.3299	0.4333	-0.5701	-0.9314	2.2227	-0.0805	0.1005	-0.5603	0.1355	0.1126
+WWTR1|TAZ	0.8656	-1.6999	0.5221	1.945	-0.3966	-0.6235	-1.1146	1.3391	-1.356	-0.5524	0.0117	-0.3953	0.1903	0.2865	1.4795	-0.966	-0.4164	-2.0392	-0.2114	0.9639	0.4204	-1.2271	1.1735	-0.3788	0.203	-0.7789	0.306	-0.2718	-0.3639	-0.6291	0.1465	0.9082	1.3318	1.4462	-1.0706	2.9203	-0.8498	0.0631	-0.6921	-0.1441	-1.0016	-0.4896	1.0177	0.5293	-0.401
+TIGAR|TIGAR	1.0075	-1.5984	-1.1935	0.7353	-1.2695	-0.2504	-3.2493	0.964	0.1689	-0.1966	-0.195	-1.0353	0.975	1.6397	0.2642	-0.5206	-0.9431	-0.6682	0.1351	0.8967	-0.5039	-0.4656	2.413	-0.6493	0.6088	0.1646	-0.8839	-0.1962	0.7476	-1.0844	0.2214	0.2504	0.7356	-0.549	0.3619	2.5065	-0.5065	0.065	-0.0493	-0.3622	0.5034	0.165	1.0845	0.0683	-0.3123
+TGM2|Transglutaminase	-0.1838	-0.4496	3.9671	2.9232	0.1839	-0.6886	-0.0007	-1.0568	-0.301	-0.2029	-0.7976	0.6093	0.7475	0.6589	-0.0703	-0.9015	-0.4957	-0.7491	0.1177	-0.2275	0.4416	-0.623	2.8924	-0.6931	-0.4148	-0.554	-0.7006	-0.444	-0.2234	0.0291	-0.1734	-0.22	-0.0543	-0.6715	-0.0854	1.1583	-0.1358	-0.8419	-0.2727	-0.4081	-0.2864	-0.0606	-0.4624	0.6352	-0.9137
+TFRC|TFRC	-0.8071	-0.9564	0.6068	-1.0669	-0.1093	-0.0299	-0.7081	0.3063	-0.5247	-1.5601	0.461	-0.5712	2.236	1.1646	-0.6559	-0.4358	-0.8187	1.0651	-0.6758	1.4548	0.8348	-0.5892	-0.953	1.5542	-1.0602	-1.0706	1.1891	0.3652	-0.1692	-0.4743	-0.6157	2.7773	0.0549	0.6561	-0.5848	1.3787	1.6069	-1.2262	0.5447	-1.1897	-0.0193	-0.9372	-0.3856	-0.6151	0.5537
+TSC1|TSC1	1.2981	-2.0179	0.5927	-0.8691	-1.4449	0.6323	-1.2874	1.3379	-1.1754	1.1119	0.8045	-1.1511	0.5802	-0.1355	1.1051	-0.4801	-0.2388	-0.0412	1.7942	1.1728	0.2965	-1.3265	-1.4756	0.7076	0.0614	-0.4055	0.3882	-0.1698	-0.3463	-0.7249	-1.2022	0.7287	2.1019	0.6523	-0.6024	1.4199	-0.0062	-0.478	-0.7723	-1.3987	0.6843	-0.3989	0.7479	-1.1448	1.075
+TSC2|Tuberin_pT1462	-0.628	-1.9774	-0.113	0.5751	0.9005	0.3421	-1.3828	-0.3681	1.226	0.2133	-0.6114	0.6839	-1.7879	-0.7606	1.0238	1.1318	-0.3998	1.4217	-0.6653	0.1172	0.0736	0.2986	-0.0135	1.8546	-0.8551	0.9287	1.1867	0.2218	-0.7816	-1.1509	-0.1221	-1.6192	-0.4248	2.0462	-1.4601	-0.9052	0.876	-0.3595	-0.0322	-0.3876	-0.9472	0.9703	-0.8865	0.6217	1.9261
+VHL|VHL	0.5726	2.158	0.5949	0.3126	0.5392	0.1682	2.2484	-3.2024	-0.8755	-0.6409	-0.6815	0.4014	-0.1064	-0.899	-0.7864	0.2635	0.6303	0.8582	-1.1413	-1.6331	-0.3623	-0.385	-1.1373	0.2154	0.3234	-0.6252	1.2634	0.1727	-0.2394	1.8211	0.0644	-0.4467	-0.1715	-1.0741	-0.2868	1.0463	-0.6834	-0.1967	-0.8817	0.9031	1.549	0.4093	-0.9044	0.4371	0.4085
+XBP1|XBP1	0.9066	1.8459	1.1031	0.0442	0.9588	0.3648	2.2981	-2.87	-1.1714	0.68	-0.4501	0.3343	-0.6242	-0.9876	-0.5679	-0.0682	0.6351	-0.8499	-1.3094	-0.2505	0.94	-0.7246	0.0047	-1.3379	0.0136	-0.2049	0.6257	0.6872	-0.0539	1.473	0.2614	0.1021	1.3158	-1.7261	-0.8469	-1.3463	-0.7097	0.5718	-0.9587	1.5273	0.3015	0.0166	-0.2828	0.5732	-0.2438
+TUBA1B|Acetyl-a-Tubulin-Lys40	0.1241	-1.2151	-0.1875	0.4452	0.7868	0.7146	1.06	-0.279	-0.2408	-0.061	-0.2367	-0.6042	0.6786	0.8287	-0.6285	-1.1589	-0.6381	-0.2877	0.0212	1.283	2.6334	-0.3272	-1.3335	-0.5435	1.5489	0.357	-1.1033	1.0994	-1.5105	-0.2348	0.884	-1.037	-0.6357	1.2096	-0.2073	-0.7337	-1.5779	0.8031	-2.1359	1.594	0.5722	0.6175	-1.5451	1.1813	0.0201
+SQSTM1|p62-LCK-ligand	0.6489	0.8091	0.8781	0.33	0.6484	0.1024	-0.9478	0.7539	0.2306	-1.2663	1.0062	-0.5062	0.5413	0.1872	-1.3394	-0.5089	0.242	-0.9525	-0.8096	-0.1624	-0.1698	-1.6965	-1.3846	-0.1508	0.374	1.124	0.69	1.3531	0.4164	1.9208	1.0211	1.0758	-0.4892	0.5115	-0.3364	-1.1417	-0.5633	0.3578	-0.8759	0.097	-1.4183	2.8292	-0.8764	-0.1833	-2.3697
+YWHAB|14-3-3_beta	1.2969	1.0242	2.2615	1.2227	0.1869	-0.7074	1.0013	-1.7215	-1.6558	0.1041	-0.7691	0.526	0.1608	0.6045	-0.4048	-0.0137	1.1348	-1.5681	-1.8722	-1.1324	1.7654	-0.4559	0.2989	-2.1742	0.2671	-0.3614	0.5045	0.3738	-0.3543	1.2575	0.2542	-0.6975	1.1649	-1.0287	0.0905	-0.7019	-0.6088	0.5673	-1.285	0.3915	0.1699	0.8329	-0.1947	0.9127	-0.6678
+YWHAZ|14-3-3_zeta	0.2316	-2.2685	0.1202	-0.482	0.1601	-0.755	-0.8411	-1.1898	0.0721	0.6146	0.4093	-0.272	-0.3998	2.091	0.118	-1.2688	-1.613	0.5824	-1.0008	0.8821	1.9394	-1.0268	-0.2956	1.632	-1.5665	-1.0308	0.3714	0.1498	0.779	-1.1568	-0.389	2.1281	0.3422	-0.0923	-0.0725	0.4542	0.4347	-0.3499	0.7759	0.0582	0.1277	1.9941	-0.485	1.0391	-0.9508
+ACVRL1|ACVRL1	0.567	-0.7621	2.2464	1.4054	-0.2117	-1.2752	0.9681	0.7415	0.223	-0.0313	-0.3992	-0.6584	0.2608	1.0896	0.0009	-1.1413	-0.054	-0.5345	1.2624	0.2884	1.1712	-2.4505	1.4295	-2.991	-0.3005	-1.2941	0.3713	0.5767	0.2434	0.5339	0.1161	-1.0323	1.1457	-1.2972	-0.1522	0.0195	-0.6252	0.9167	-0.8489	0.692	-0.8633	0.1807	-0.0829	0.6888	-0.133
+DIRAS3|DIRAS3	0.4534	1.5448	1.5001	0.8749	0.2518	0.145	1.8828	-1.8081	-0.7702	0.7969	-0.0621	-0.6473	0.0535	-1.0097	-0.3834	-0.0506	1.2284	-0.3217	-0.7159	-1.7308	-0.3798	-1.0045	-1.0271	-1.0078	1.3341	-0.5179	0.3526	0.3178	0.5577	0.9538	0.5087	-0.5649	0.5269	-3.3074	0.1325	1.5169	-0.6611	0.2942	-1.0271	1.4072	-0.0751	0.3317	-0.0142	0.1956	-0.0747
+ANXA1|Annexin-1	0.0291	1.0176	0.498	2.9821	0.5896	-0.5281	1.6108	0.5862	-0.6446	-0.8581	-1.0727	0.3582	1.6235	-1.571	-0.8991	-0.2778	0.4055	0.8928	-1.9645	-0.4202	0.1912	-0.1779	0.3623	-1.2215	-0.3234	1.8456	0.2794	0.0973	-0.617	1.5286	0.6625	-0.9769	-0.804	-0.783	-0.5882	-1.6753	-0.6261	-0.78	-0.0299	0.2422	-0.4301	-0.1388	0.5856	1.4848	-0.4646
+PREX1|PREX1	-1.1483	0.269	1.4038	0.0777	0.4303	-1.1008	1.7274	-0.275	-1.1587	-0.6256	-0.4418	0.95	-0.9426	-2.1424	0.3227	1.1014	0.5377	0.1199	-0.8138	-0.3108	-0.1886	-0.5884	-1.8831	-1.3091	-0.813	1.1512	0.0645	0.8762	0.1131	1.3619	0.3787	-0.3154	0.9348	-1.5	1.1327	-1.1901	-1.3581	2.6865	0.3181	0.4361	0.4891	0.17	0.0334	0.5821	0.4374
+ERCC1|ERCC1	-0.2214	0.1308	-0.138	-0.9838	0.2101	-0.8326	-0.9247	-1.9835	1.6498	1.3173	-0.2234	0.185	-1.6099	0.0698	0.0248	0.8722	0.0173	0.579	-0.3099	0.8328	0.5153	0.6855	-2.1628	1.5502	1.1275	1.0168	-0.0868	-0.7649	-0.3405	0.2022	-1.2758	-2.6628	-0.2203	1.3898	0.5686	-0.0173	0.3031	0.6769	1.5125	-1.2898	1.3733	-0.6005	0.5515	-0.0433	-0.6702
+MSH2|MSH2	0.401	0.3899	-0.1145	-0.8905	-0.3679	0.4567	0.5557	-0.4797	0.2599	0.7567	0.5591	0.1731	0.374	-0.5288	0.1158	0.1069	0.1224	0.306	1.0292	0.3523	-1.0188	-1.1947	-1.5864	1.803	0.2204	-0.7841	-0.5013	-0.5329	1.6438	0.2828	-1.2362	-3.162	1.782	-1.5507	-0.0937	2.8927	0.4511	-0.0422	0.3742	0.1684	0.8198	-0.8528	-0.4543	-0.2812	-0.724
+MSH6|MSH6	0.5368	-0.8689	-0.787	-1.1923	-0.5128	0.6809	-0.3596	-0.1269	0.04	0.31	1.0065	-0.0002	1.1227	0.5182	0.2045	-0.1549	-0.0867	0.4679	1.5894	1.3268	-2.0529	-0.8436	-1.1671	1.7115	-0.1106	-0.5751	-0.66	-0.8471	1.5742	-0.5705	-1.1456	-1.9081	1.052	-1.1773	-0.1267	2.9274	0.708	-0.4145	0.2862	-0.2259	1.5608	-0.8257	-0.0555	-0.3533	-0.4746
+DIABLO|Smac	1.0906	0.8588	0.4954	1.8294	1.6491	0.1073	-1.2204	-1.5674	-0.8366	0.8573	-2.1486	0.5734	-0.5846	-0.2835	-0.8432	-0.1901	0.75	-0.7872	-0.5514	-0.2348	1.244	-0.614	0.1168	-1.6822	-0.0476	0.3546	-1.1272	1.4149	-1.0298	0.4617	0.3681	-1.3879	-0.0233	-1.4968	0.8309	-0.8702	0.1912	-0.0134	-0.4818	1.2111	1.0199	1.4091	0.1408	1.7869	-0.7393
+ADAR|ADAR1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
+CTNNA1|alpha-Catenin	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
+NKX2-1|TTF1	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
+CASP3|Caspase-3	0.4478	-2.6634	-0.4006	0.0564	0.1006	0.714	-1.3639	0.6779	-1.0567	1.1802	0.216	-0.6183	-0.0693	-0.9806	0.9889	-0.1382	-1.7251	-1.3722	0.866	1.5992	0.1334	0.5454	0.616	0.7972	-1.7318	0.1235	-0.1823	0.0091	0.8312	-2.0216	-0.8313	1.0136	1.7637	-0.5781	0.611	1.7975	0.9592	0.6606	1.0019	-0.6861	-0.2855	-0.4877	0.3785	-0.5363	-0.3598
+CASP9|Caspase-9	-1.1494	-1.4902	-1.2377	-0.4473	-1.3402	0.0539	-0.8549	0.1473	0.803	0.7233	1.9546	-0.0707	-0.0325	-1.4859	0.7461	-0.5567	-0.0138	1.5866	1.9246	2.7388	-0.3251	-0.3994	-0.3159	-0.0628	-0.7319	-0.1875	-0.0475	-0.219	-0.1854	-0.8214	-0.7233	1.019	1.6329	0.3359	0.3003	0.6401	2.2121	-0.9874	0.5447	-0.2286	-0.6603	-1.0337	-0.4526	-0.8366	-0.4654
+PARP1|PARP1	1.1775	-1.6249	-0.4132	-0.3701	-0.7913	0.3408	-1.0256	0.9831	-0.4496	-0.1024	-0.0391	-0.2272	-0.1589	0.2586	0.836	-0.8618	-1.2223	0.4337	2.4445	0.9826	0.0995	-2.0082	-0.5202	0.2409	-0.2539	-0.6523	-0.3936	-0.541	-0.371	-1.2365	-0.4097	2.3573	1.5098	0.0059	-0.8701	2.0209	-0.9696	-0.0651	0.1515	-0.6337	0.6222	-0.0903	-0.3554	-0.2016	2.3937
+COPS5|JAB1	0.5996	1.9157	1.5887	1.1461	0.4464	0.3132	2.5152	-3.4254	-0.3087	0.1566	-0.3975	0.0923	0.2202	-0.6352	-0.5831	-0.0424	0.8839	-0.1037	-0.6915	-1.4205	0.2407	-0.6251	-1.6338	-1.192	0.6374	-0.4758	0.9959	0.2233	0.3481	1.4977	0.0704	-0.5503	0.0747	-1.2219	0.3671	-1.4542	-0.1841	-0.28	-0.6737	0.9026	0.0931	0.2799	-0.2188	0.5093	-0.0005

acc_tcga_pan_can_atlas_2018/data_sv.txt ADDED Viewed

	@@ -0,0 +1,262 @@

+Sample_Id	Site1_Hugo_Symbol	Site1_Chromosome	Site1_Position	Site2_Hugo_Symbol	Site2_Chromosome	Site2_Position	Site2_Effect_On_Frame	NCBI_Build	Tumor_Split_Read_Count	Tumor_Paired_End_Read_Count	SV_Status	Event_Info
+TCGA-OR-A5J1-01	RHOF	12	121801707	HEXDC	17	82440997		GRCh37	51	268	SOMATIC	RHOF-HEXDC fusion
+TCGA-OR-A5J1-01	PRLR	5	35230268	CLPTM1L	5	1318453		GRCh37	22	103	SOMATIC	PRLR-CLPTM1L fusion
+TCGA-OR-A5J1-01	KCTD5	16	2697997	TSC2	16	2086193	in-frame	GRCh37	24	59	SOMATIC	KCTD5-TSC2 fusion
+TCGA-OR-A5J1-01	NCAPD2	12	6494154	MRPL48	11	73805027		GRCh37	23	51	SOMATIC	NCAPD2-MRPL48 fusion
+TCGA-OR-A5J1-01	DAB2	5	39392365	ARSB	5	78969192	in-frame	GRCh37	13	59	SOMATIC	DAB2-ARSB fusion
+TCGA-OR-A5J1-01	TBCA	5	77708242	ARSB	5	78839426	frameshift	GRCh37	5	16	SOMATIC	TBCA-ARSB fusion
+TCGA-OR-A5J1-01	DAB2	5	39424804	COL4A3BP	5	75459181		GRCh37	4	18	SOMATIC	DAB2-COL4A3BP fusion
+TCGA-OR-A5J1-01	TBCD	17	82884202	GLIPR2	9	36147786	frameshift	GRCh37	3	15	SOMATIC	TBCD-GLIPR2 fusion
+TCGA-OR-A5J1-01	C9	5	39424804	COL4A3BP	5	75459181		GRCh37	4	10	SOMATIC	C9-COL4A3BP fusion
+TCGA-OR-A5J1-01	CWC27	5	64885546	PLPP1	5	55426039	frameshift	GRCh37	5	5	SOMATIC	CWC27-PLPP1 fusion
+TCGA-OR-A5J1-01	DYNC1I1	7	95869998	ASB4	7	95495758	in-frame	GRCh37	4	9	SOMATIC	DYNC1I1-ASB4 fusion
+TCGA-OR-A5J1-01	UIMC1	5	176943335	DBN1	5	177468899	frameshift	GRCh37	3	13	SOMATIC	UIMC1-DBN1 fusion
+TCGA-OR-A5J1-01	KMT2A	11	118482495	ATP5L	11	118431024	in-frame	GRCh37	2	15	SOMATIC	KMT2A-ATP5L fusion
+TCGA-OR-A5J1-01	MIER3	5	56935428	KIF2A	5	62385484	in-frame	GRCh37	3	9	SOMATIC	MIER3-KIF2A fusion
+TCGA-OR-A5J1-01	RBM14	11	66618561	BBS1	11	66515540		GRCh37	1	17	SOMATIC	RBM14-BBS1 fusion
+TCGA-OR-A5J1-01	HNRNPUL1	19	41268345	CLIP3	19	36032766		GRCh37	1	11	SOMATIC	HNRNPUL1-CLIP3 fusion
+TCGA-OR-A5J1-01	NRG4	15	76009200	SCNN1D	1	1290477	frameshift	GRCh37	1	9	SOMATIC	NRG4-SCNN1D fusion
+TCGA-OR-A5J1-01	TNPO1	5	72816752	MEF2C	5	88761328	in-frame	GRCh37	2	3	SOMATIC	TNPO1-MEF2C fusion
+TCGA-OR-A5J1-01	PAPD4	5	79613075	GPBP1	5	57175448		GRCh37	1	5	SOMATIC	PAPD4-GPBP1 fusion
+TCGA-OR-A5J1-01	GIGYF2	2	232794944	HSCB	22	28751241	frameshift	GRCh37	1	3	SOMATIC	GIGYF2-HSCB fusion
+TCGA-OR-A5J2-01	ASXL2	2	25806229	PPWD1	5	65576879	in-frame	GRCh37	2	17	SOMATIC	ASXL2-PPWD1 fusion
+TCGA-OR-A5J2-01	AJAP1	1	4655454	CYTH3	7	6190531	frameshift	GRCh37	1	13	SOMATIC	AJAP1-CYTH3 fusion
+TCGA-OR-A5J3-01	ASB4	7	95536550	DYNC1I1	7	95804721		GRCh37	1	1	SOMATIC	ASB4-DYNC1I1 fusion
+TCGA-OR-A5J7-01	KIF1B	1	10232434	FAM58A	X	153596187	in-frame	GRCh37	50	448	SOMATIC	KIF1B-FAM58A fusion
+TCGA-OR-A5J7-01	FLVCR2	14	75579641	BATF	14	75546462	in-frame	GRCh37	49	328	SOMATIC	FLVCR2-BATF fusion
+TCGA-OR-A5J7-01	PRX	19	40398620	BLVRB	19	40448046	frameshift	GRCh37	54	162	SOMATIC	PRX-BLVRB fusion
+TCGA-OR-A5J7-01	PDXK	21	43758542	RRP1B	21	43694893		GRCh37	32	131	SOMATIC	PDXK-RRP1B fusion
+TCGA-OR-A5J7-01	ASPSCR1	17	81985607	HGS	17	81700467	frameshift	GRCh37	25	93	SOMATIC	ASPSCR1-HGS fusion
+TCGA-OR-A5J7-01	SCMH1	1	41033983	CA6	1	8949263	in-frame	GRCh37	19	82	SOMATIC	SCMH1-CA6 fusion
+TCGA-OR-A5J7-01	MAPKAPK5	12	111842769	ALDH2	12	111803859	in-frame	GRCh37	9	57	SOMATIC	MAPKAPK5-ALDH2 fusion
+TCGA-OR-A5J7-01	PEBP1	12	118139551	DENND4B	1	153936188	frameshift	GRCh37	4	76	SOMATIC	PEBP1-DENND4B fusion
+TCGA-OR-A5J7-01	NFE2L1	17	48048462	NPEPPS	17	47596353		GRCh37	10	41	SOMATIC	NFE2L1-NPEPPS fusion
+TCGA-OR-A5J7-01	NR5A1	9	124500090	NR6A1	9	124524873	frameshift	GRCh37	5	43	SOMATIC	NR5A1-NR6A1 fusion
+TCGA-OR-A5J7-01	CSNK1G1	15	64355988	CS	12	56286645		GRCh37	4	42	SOMATIC	CSNK1G1-CS fusion
+TCGA-OR-A5J7-01	GTF2I	7	74658068	FLAD1	1	154988105		GRCh37	7	28	SOMATIC	GTF2I-FLAD1 fusion
+TCGA-OR-A5J7-01	KDM4B	19	5047669	CCDC94	19	4247119		GRCh37	8	23	SOMATIC	KDM4B-CCDC94 fusion
+TCGA-OR-A5J7-01	SBNO2	19	1168694	TULP2	19	48889631		GRCh37	5	34	SOMATIC	SBNO2-TULP2 fusion
+TCGA-OR-A5J7-01	TMEM87B	2	112081118	PVT1	8	127890589		GRCh37	5	24	SOMATIC	TMEM87B-PVT1 fusion
+TCGA-OR-A5J7-01	PGAP1	2	196885424	HSPD1	2	197497392	in-frame	GRCh37	5	16	SOMATIC	PGAP1-HSPD1 fusion
+TCGA-OR-A5J7-01	RCOR1	14	102681978	PPP2R5C	14	101856686	in-frame	GRCh37	3	21	SOMATIC	RCOR1-PPP2R5C fusion
+TCGA-OR-A5J7-01	MAP4	3	47928228	ENPP7P14	16	5111430		GRCh37	5	10	SOMATIC	MAP4-ENPP7P14 fusion
+TCGA-OR-A5J7-01	NDEL1	17	8454887	KCNB1	20	49310799		GRCh37	2	17	SOMATIC	NDEL1-KCNB1 fusion
+TCGA-OR-A5J7-01	ELMSAN1	14	73787102	ALDH6A1	14	74075017		GRCh37	2	13	SOMATIC	ELMSAN1-ALDH6A1 fusion
+TCGA-OR-A5J7-01	EXOSC10	1	11079711	MTOR	1	11130777	in-frame	GRCh37	2	9	SOMATIC	EXOSC10-MTOR fusion
+TCGA-OR-A5J7-01	PVT1	8	127794734	MERTK	2	111965191		GRCh37	2	9	SOMATIC	PVT1-MERTK fusion
+TCGA-OR-A5J7-01	AS3MT	10	102890678	SUFU	10	102597140	in-frame	GRCh37	2	7	SOMATIC	AS3MT-SUFU fusion
+TCGA-OR-A5J8-01	AARS2	6	44310994	SPATS1	6	44360446	in-frame	GRCh37	184	1079	SOMATIC	AARS2-SPATS1 fusion
+TCGA-OR-A5J8-01	EIF4H	7	74174442	AARS2	6	44312263	frameshift	GRCh37	118	449	SOMATIC	EIF4H-AARS2 fusion
+TCGA-OR-A5J8-01	CAPRIN1	11	34090678	CD151	11	838133	in-frame	GRCh37	8	65	SOMATIC	CAPRIN1-CD151 fusion
+TCGA-OR-A5J8-01	NFKBIE	6	44262560	FBXO9	6	53071057	in-frame	GRCh37	1	15	SOMATIC	NFKBIE-FBXO9 fusion
+TCGA-OR-A5J8-01	RNF185	22	31192702	SMTN	22	31095303	in-frame	GRCh37	1	6	SOMATIC	RNF185-SMTN fusion
+TCGA-OR-A5J8-01	DDR2	1	162655374	ATF6	1	161958446		GRCh37	1	3	SOMATIC	DDR2-ATF6 fusion
+TCGA-OR-A5J9-01	PPP2R5C	14	101810036	PRKD1	14	29599817	frameshift	GRCh37	2	33	SOMATIC	PPP2R5C-PRKD1 fusion
+TCGA-OR-A5J9-01	ITPKA	15	41494416	NUSAP1	15	41342386	in-frame	GRCh37	2	13	SOMATIC	ITPKA-NUSAP1 fusion
+TCGA-OR-A5J9-01	NCS1	9	130172727	GPR107	9	130127483	frameshift	GRCh37	3	9	SOMATIC	NCS1-GPR107 fusion
+TCGA-OR-A5J9-01	RAD51B	14	67887204	BAZ1A	14	34758846	frameshift	GRCh37	2	3	SOMATIC	RAD51B-BAZ1A fusion
+TCGA-OR-A5JA-01	HELLPAR	12	102315490	NTN4	12	95683711		GRCh37	3	19	SOMATIC	HELLPAR-NTN4 fusion
+TCGA-OR-A5JA-01	PAH	12	102894735	METAP2	12	95512801	in-frame	GRCh37	4	10	SOMATIC	PAH-METAP2 fusion
+TCGA-OR-A5JA-01	VCP	9	35072337	ATOSB	9	35108737		GRCh37	5	6	SOMATIC	VCP-ATOSB fusion
+TCGA-OR-A5JA-01	NTN4	12	95682707	PAH	12	102894918	frameshift	GRCh37	2	16	SOMATIC	NTN4-PAH fusion
+TCGA-OR-A5JA-01	MIAT	22	26657654	CRYBA4	22	26630340		GRCh37	2	11	SOMATIC	MIAT-CRYBA4 fusion
+TCGA-OR-A5JA-01	SLC44A2	19	10635515	LDLR	19	11131281	in-frame	GRCh37	1	6	SOMATIC	SLC44A2-LDLR fusion
+TCGA-OR-A5JA-01	FRS2	12	69470530	NTN4	12	95670146		GRCh37	1	4	SOMATIC	FRS2-NTN4 fusion
+TCGA-OR-A5JB-01	ST3GAL3	1	43707693	EBNA1BP2	1	43261918		GRCh37	6	5	SOMATIC	ST3GAL3-EBNA1BP2 fusion
+TCGA-OR-A5JC-01	FAM19A4	3	68880730	LMOD3	3	69122409		GRCh37	3	9	SOMATIC	FAM19A4-LMOD3 fusion
+TCGA-OR-A5JC-01	PPP2R5E	14	63415140	XRCC3	14	103711567		GRCh37	3	1	SOMATIC	PPP2R5E-XRCC3 fusion
+TCGA-OR-A5JC-01	HERC1	15	63664470	DAPK2	15	63983754	frameshift	GRCh37	1	3	SOMATIC	HERC1-DAPK2 fusion
+TCGA-OR-A5JD-01	MALAT1	11	65502076	FAM166A	9	137245222		GRCh37	15	79	SOMATIC	MALAT1-FAM166A fusion
+TCGA-OR-A5JE-01	SETX	9	132354917	RAB14	9	121193419		GRCh37	7	18	SOMATIC	SETX-RAB14 fusion
+TCGA-OR-A5JE-01	SLC12A4	16	67957742	DPEP2	16	67999748		GRCh37	1	19	SOMATIC	SLC12A4-DPEP2 fusion
+TCGA-OR-A5JF-01	SNHG19	16	2155143	USP49	6	41799938		GRCh37	155	856	SOMATIC	SNHG19-USP49 fusion
+TCGA-OR-A5JF-01	FAM96B	16	66933614	CYFIP1	15	22932340	frameshift	GRCh37	1	2	SOMATIC	FAM96B-CYFIP1 fusion
+TCGA-OR-A5JK-01	JADE2	5	134526011	UBE2B	5	134390225		GRCh37	3	29	SOMATIC	JADE2-UBE2B fusion
+TCGA-OR-A5JK-01	ZBTB38	3	141369946	CHCT1	17	60431181		GRCh37	2	15	SOMATIC	ZBTB38-CHCT1 fusion
+TCGA-OR-A5JK-01	MEG3	14	100845533	DLK1	14	100728396		GRCh37	1	1	SOMATIC	MEG3-DLK1 fusion
+TCGA-OR-A5JL-01	GTF2A1	14	81220489	POMT2	14	77302943	frameshift	GRCh37	12	38	SOMATIC	GTF2A1-POMT2 fusion
+TCGA-OR-A5JL-01	ANO2	12	5732517	GALNT8	12	4850740		GRCh37	7	12	SOMATIC	ANO2-GALNT8 fusion
+TCGA-OR-A5JM-01	TAF6L	11	62771490	PCYT1A	3	196242640		GRCh37	12	21	SOMATIC	TAF6L-PCYT1A fusion
+TCGA-OR-A5JM-01	SCARB2	4	76213427	SGMS1	10	50344345		GRCh37	3	15	SOMATIC	SCARB2-SGMS1 fusion
+TCGA-OR-A5JM-01	LIN7A	12	80811465	R3HDM2	12	57310463		GRCh37	3	1	SOMATIC	LIN7A-R3HDM2 fusion
+TCGA-OR-A5JM-01	KIF5A	12	57567618	DTX1	12	113077424	frameshift	GRCh37	1	6	SOMATIC	KIF5A-DTX1 fusion
+TCGA-OR-A5JM-01	WBP1L	10	102816267	DLK1	14	100728421		GRCh37	1000	1000	SOMATIC	WBP1L-DLK1 fusion
+TCGA-OR-A5JO-01	TMLHE	X	155524456	VBP1	X	155208874		GRCh37	1	13	SOMATIC	TMLHE-VBP1 fusion
+TCGA-OR-A5JP-01	LDLR	19	11089615	ZGLP1	19	10308391	frameshift	GRCh37	421	7675	SOMATIC	LDLR-ZGLP1 fusion
+TCGA-OR-A5JP-01	PEG3	19	56836070	DENR	12	122767588		GRCh37	35	260	SOMATIC	PEG3-DENR fusion
+TCGA-OR-A5JP-01	ZIM2	19	56836070	DENR	12	122767588		GRCh37	35	260	SOMATIC	ZIM2-DENR fusion
+TCGA-OR-A5JP-01	ARMC9	2	231198698	BLVRB	19	40451492		GRCh37	40	215	SOMATIC	ARMC9-BLVRB fusion
+TCGA-OR-A5JP-01	SCAMP4	19	1918990	COX8A	11	63976225	frameshift	GRCh37	10	287	SOMATIC	SCAMP4-COX8A fusion
+TCGA-OR-A5JP-01	MYLIP	6	16130747	OR5V1	6	29356277		GRCh37	7	74	SOMATIC	MYLIP-OR5V1 fusion
+TCGA-OR-A5JP-01	ZC3H4	19	47110895	ARHGAP35	19	46987989		GRCh37	7	46	SOMATIC	ZC3H4-ARHGAP35 fusion
+TCGA-OR-A5JP-01	LAPTM4B	8	97776108	ARMC9	2	231355798	frameshift	GRCh37	7	14	SOMATIC	LAPTM4B-ARMC9 fusion
+TCGA-OR-A5JP-01	QSOX2	9	136245476	CTU2	16	88714860	frameshift	GRCh37	4	25	SOMATIC	QSOX2-CTU2 fusion
+TCGA-OR-A5JP-01	RECQL5	17	75658298	CACNA1G	17	50590471	in-frame	GRCh37	1	6	SOMATIC	RECQL5-CACNA1G fusion
+TCGA-OR-A5JR-01	DLK1	14	100729066	MTCO1P12	1	631074		GRCh37	1	53	SOMATIC	DLK1-MTCO1P12 fusion
+TCGA-OR-A5JS-01	NSD1	5	177192019	EFNA5	5	107381376	in-frame	GRCh37	26	92	SOMATIC	NSD1-EFNA5 fusion
+TCGA-OR-A5JS-01	GJC1	17	44807394	SKAP1	17	48189500		GRCh37	23	70	SOMATIC	GJC1-SKAP1 fusion
+TCGA-OR-A5JS-01	TLK2	17	62608148	CEP112	17	65689218	in-frame	GRCh37	19	67	SOMATIC	TLK2-CEP112 fusion
+TCGA-OR-A5JS-01	CCNG1	5	163444481	SLCO6A1	5	102373494		GRCh37	2	17	SOMATIC	CCNG1-SLCO6A1 fusion
+TCGA-OR-A5JS-01	CCDC47	17	63773412	TERT	5	1282624		GRCh37	2	8	SOMATIC	CCDC47-TERT fusion
+TCGA-OR-A5JS-01	UIMC1	5	176982469	PJA2	5	109383520		GRCh37	3	4	SOMATIC	UIMC1-PJA2 fusion
+TCGA-OR-A5JS-01	INTS2	17	61911520	GLIS3	9	3829492	frameshift	GRCh37	1	10	SOMATIC	INTS2-GLIS3 fusion
+TCGA-OR-A5JT-01	PHF20	20	35899648	SPAG4	20	35619195	in-frame	GRCh37	9	36	SOMATIC	PHF20-SPAG4 fusion
+TCGA-OR-A5JT-01	C4B	6	32032133	DLK1	14	100734648	in-frame	GRCh37	1	15	SOMATIC	C4B-DLK1 fusion
+TCGA-OR-A5JT-01	ZNF341	20	33745299	C20orf144	20	33663532	in-frame	GRCh37	2	8	SOMATIC	ZNF341-C20orf144 fusion
+TCGA-OR-A5JT-01	CYC1	8	144096010	DLK1	14	100734465	frameshift	GRCh37	1000	1000	SOMATIC	CYC1-DLK1 fusion
+TCGA-OR-A5JT-01	RPL10	X	154400201	DLK1	14	100728950		GRCh37	1000	1000	SOMATIC	RPL10-DLK1 fusion
+TCGA-OR-A5JT-01	NKAIN4	20	63240784	IGF2	11	2132154		GRCh37	1000	1000	SOMATIC	NKAIN4-IGF2 fusion
+TCGA-OR-A5JV-01	ADGRV1	5	90985522	CLPTM1L	5	1318453	in-frame	GRCh37	52	246	SOMATIC	ADGRV1-CLPTM1L fusion
+TCGA-OR-A5JX-01	APC	5	112801383	REEP2	5	138445683	in-frame	GRCh37	1	8	SOMATIC	APC-REEP2 fusion
+TCGA-OR-A5JY-01	GABRA5	15	26869334	NOV	8	119416386		GRCh37	34	244	SOMATIC	GABRA5-NOV fusion
+TCGA-OR-A5JY-01	CREB3L2	7	138001604	CPA2	7	130282104	in-frame	GRCh37	30	97	SOMATIC	CREB3L2-CPA2 fusion
+TCGA-OR-A5JY-01	COMT	22	19964299	YPEL1	22	21710908		GRCh37	10	58	SOMATIC	COMT-YPEL1 fusion
+TCGA-OR-A5JY-01	HPS4	22	26479265	CABIN1	22	24164400	in-frame	GRCh37	13	46	SOMATIC	HPS4-CABIN1 fusion
+TCGA-OR-A5JY-01	ASCC3	6	100604631	TXNRD2	22	19941897		GRCh37	13	9	SOMATIC	ASCC3-TXNRD2 fusion
+TCGA-OR-A5JY-01	UBE2J1	6	89352539	CFAP206	6	87464020	frameshift	GRCh37	4	29	SOMATIC	UBE2J1-CFAP206 fusion
+TCGA-OR-A5JY-01	PAFAH1B2	11	117144418	RRP7BP	22	42580359		GRCh37	3	21	SOMATIC	PAFAH1B2-RRP7BP fusion
+TCGA-OR-A5JY-01	MGA	15	41699159	NUSAP1	15	41349098	frameshift	GRCh37	4	9	SOMATIC	MGA-NUSAP1 fusion
+TCGA-OR-A5JY-01	FGD4	12	32399959	SLCO1A2	12	21334709		GRCh37	2	16	SOMATIC	FGD4-SLCO1A2 fusion
+TCGA-OR-A5JY-01	VPS26B	11	134240155	C15orf41	15	36644278	in-frame	GRCh37	2	14	SOMATIC	VPS26B-C15orf41 fusion
+TCGA-OR-A5JY-01	UBR2	6	42674193	PXT1	6	36400584	frameshift	GRCh37	1	17	SOMATIC	UBR2-PXT1 fusion
+TCGA-OR-A5JY-01	WWOX	16	78164289	CDH3	16	68722425	in-frame	GRCh37	2	11	SOMATIC	WWOX-CDH3 fusion
+TCGA-OR-A5JY-01	KCTD18	2	200497753	PLCL1	2	198355295		GRCh37	2	9	SOMATIC	KCTD18-PLCL1 fusion
+TCGA-OR-A5JY-01	PKIB	6	122633367	BLK	8	11561302		GRCh37	1	12	SOMATIC	PKIB-BLK fusion
+TCGA-OR-A5JY-01	TBL1XR1	3	177160871	ATG7	3	11554811		GRCh37	2	4	SOMATIC	TBL1XR1-ATG7 fusion
+TCGA-OR-A5JY-01	LIPH	3	185552423	EHHADH	3	185193487	in-frame	GRCh37	1	4	SOMATIC	LIPH-EHHADH fusion
+TCGA-OR-A5JY-01	MBD3	19	1582622	PALM	19	726138	frameshift	GRCh37	1	4	SOMATIC	MBD3-PALM fusion
+TCGA-OR-A5JZ-01	C5orf56	5	132419940	SGF29	16	28581055		GRCh37	11	33	SOMATIC	C5orf56-SGF29 fusion
+TCGA-OR-A5JZ-01	MADD	11	47326858	POU2AF1	11	111358882		GRCh37	3	58	SOMATIC	MADD-POU2AF1 fusion
+TCGA-OR-A5JZ-01	LRFN5	14	41608562	SNORA31	14	41594478		GRCh37	3	15	SOMATIC	LRFN5-SNORA31 fusion
+TCGA-OR-A5JZ-01	SPEF2	5	35659207	C5orf42	5	37224740	frameshift	GRCh37	2	6	SOMATIC	SPEF2-C5orf42 fusion
+TCGA-OR-A5K0-01	MBTPS1	16	84116735	SLC38A8	16	84016727		GRCh37	35	76	SOMATIC	MBTPS1-SLC38A8 fusion
+TCGA-OR-A5K2-01	NFIC	19	3359685	SPATA33	16	89669286	frameshift	GRCh37	12	42	SOMATIC	NFIC-SPATA33 fusion
+TCGA-OR-A5K2-01	MICAL3	22	17816690	TPTEP1	22	16697496		GRCh37	1	7	SOMATIC	MICAL3-TPTEP1 fusion
+TCGA-OR-A5K2-01	TLCD2	17	1709499	LRP5	11	68409914	in-frame	GRCh37	2	2	SOMATIC	TLCD2-LRP5 fusion
+TCGA-OR-A5K4-01	PCMTD2	20	64287821	WASHC1	9	29739		GRCh37	1000	1000	SOMATIC	PCMTD2-WASHC1 fusion
+TCGA-OR-A5K5-01	OAZ1	19	2269590	AMH	19	2250191		GRCh37	77	192	SOMATIC	OAZ1-AMH fusion
+TCGA-OR-A5K5-01	SIK3	11	117098143	CTNNBIP1	1	9850776	frameshift	GRCh37	15	83	SOMATIC	SIK3-CTNNBIP1 fusion
+TCGA-OR-A5K5-01	LDLR	19	11089615	YJU2B	19	13732175		GRCh37	9	79	SOMATIC	LDLR-YJU2B fusion
+TCGA-OR-A5K5-01	BRK1	3	10115819	FANCD2	3	10096326	frameshift	GRCh37	9	70	SOMATIC	BRK1-FANCD2 fusion
+TCGA-OR-A5K5-01	TXNDC11	16	11736017	CIB4	2	26640567	in-frame	GRCh37	9	43	SOMATIC	TXNDC11-CIB4 fusion
+TCGA-OR-A5K5-01	RAB8A	19	16112025	PLVAP	19	17366195	frameshift	GRCh37	7	42	SOMATIC	RAB8A-PLVAP fusion
+TCGA-OR-A5K5-01	ZDHHC19	3	196207398	PCYT1A	3	196214498		GRCh37	4	50	SOMATIC	ZDHHC19-PCYT1A fusion
+TCGA-OR-A5K5-01	TMEM87B	2	112060037	MERTK	2	112028351	frameshift	GRCh37	4	23	SOMATIC	TMEM87B-MERTK fusion
+TCGA-OR-A5K5-01	KCMF1	2	84971467	RAB1A	2	65098066	frameshift	GRCh37	3	13	SOMATIC	KCMF1-RAB1A fusion
+TCGA-OR-A5K5-01	MSH5	6	31759177	BSCL2	11	62692797	in-frame	GRCh37	4	9	SOMATIC	MSH5-BSCL2 fusion
+TCGA-OR-A5K5-01	SENP2	3	185599024	MSH5	6	31758766	in-frame	GRCh37	3	8	SOMATIC	SENP2-MSH5 fusion
+TCGA-OR-A5K5-01	BTRC	10	101354228	MICU1	10	72566794		GRCh37	2	7	SOMATIC	BTRC-MICU1 fusion
+TCGA-OR-A5K5-01	RPRD1B	20	38066256	MEF2B	19	19157142		GRCh37	1	10	SOMATIC	RPRD1B-MEF2B fusion
+TCGA-OR-A5K5-01	TXNDC11	16	11742477	BAMBI	10	28681258	frameshift	GRCh37	1	10	SOMATIC	TXNDC11-BAMBI fusion
+TCGA-OR-A5K5-01	ARMC9	2	231198941	NPAS1	19	47021006		GRCh37	1	9	SOMATIC	ARMC9-NPAS1 fusion
+TCGA-OR-A5K5-01	DPY30	2	31917926	MCU	10	72834359		GRCh37	1	9	SOMATIC	DPY30-MCU fusion
+TCGA-OR-A5K5-01	MEMO1	2	31917926	MCU	10	72834359	in-frame	GRCh37	1	9	SOMATIC	MEMO1-MCU fusion
+TCGA-OR-A5K5-01	MYO1F	19	8577307	LRSAM1	9	127451929		GRCh37	2	5	SOMATIC	MYO1F-LRSAM1 fusion
+TCGA-OR-A5K5-01	ZC3H8	2	112230903	PARD3B	2	205158722	frameshift	GRCh37	2	2	SOMATIC	ZC3H8-PARD3B fusion
+TCGA-OR-A5K5-01	FRA10AC1	10	93684056	GCA	2	162352338	frameshift	GRCh37	1	3	SOMATIC	FRA10AC1-GCA fusion
+TCGA-OR-A5K5-01	KCNMA1	10	77637265	SERTAD1	19	40423546	in-frame	GRCh37	1	3	SOMATIC	KCNMA1-SERTAD1 fusion
+TCGA-OR-A5K5-01	MINDY3	10	15843212	CRYGD	2	208124354	frameshift	GRCh37	1	2	SOMATIC	MINDY3-CRYGD fusion
+TCGA-OR-A5K5-01	TMEM182	2	102764427	SCN3A	2	165164520	frameshift	GRCh37	1	2	SOMATIC	TMEM182-SCN3A fusion
+TCGA-OR-A5K6-01	ERN1	17	64063986	TEX2	17	64160933	in-frame	GRCh37	26	236	SOMATIC	ERN1-TEX2 fusion
+TCGA-OR-A5K9-01	ANKRD52	12	56243238	RASSF3	12	64691470	in-frame	GRCh37	9	39	SOMATIC	ANKRD52-RASSF3 fusion
+TCGA-OR-A5K9-01	OLFM2	19	9936304	PLEKHG4B	5	113251	in-frame	GRCh37	5	31	SOMATIC	OLFM2-PLEKHG4B fusion
+TCGA-OR-A5K9-01	PALM	19	719657	SGTA	19	2769091		GRCh37	1	21	SOMATIC	PALM-SGTA fusion
+TCGA-OR-A5K9-01	MLLT1	19	6270579	PRLR	5	35118122		GRCh37	1	9	SOMATIC	MLLT1-PRLR fusion
+TCGA-OR-A5K9-01	FAM19A2	12	62191259	IKZF4	12	56025054		GRCh37	1	6	SOMATIC	FAM19A2-IKZF4 fusion
+TCGA-OR-A5K9-01	ANKRD52	12	56247493	DYRK2	12	67657106	in-frame	GRCh37	1	3	SOMATIC	ANKRD52-DYRK2 fusion
+TCGA-OR-A5K9-01	SUGP1	19	19316422	CASP14	19	15052206		GRCh37	1	1	SOMATIC	SUGP1-CASP14 fusion
+TCGA-OR-A5KO-01	SYNJ2	6	158068728	COX4I1	16	85806827	frameshift	GRCh37	4	4	SOMATIC	SYNJ2-COX4I1 fusion
+TCGA-OR-A5KO-01	NT5DC1	6	116117945	SLC35F1	6	118266995	frameshift	GRCh37	1	7	SOMATIC	NT5DC1-SLC35F1 fusion
+TCGA-OR-A5KO-01	FLYWCH1	16	2940092	TVP23A	16	10818768		GRCh37	1000	1000	SOMATIC	FLYWCH1-TVP23A fusion
+TCGA-OR-A5KT-01	PYM1	12	55903387	SLC16A7	12	59779423	frameshift	GRCh37	18	80	SOMATIC	PYM1-SLC16A7 fusion
+TCGA-OR-A5KT-01	SLC16A7	12	59596236	SARNP	12	55760640		GRCh37	15	28	SOMATIC	SLC16A7-SARNP fusion
+TCGA-OR-A5KT-01	SPATS2	12	49514613	TSPAN8	12	71139848	frameshift	GRCh37	1	6	SOMATIC	SPATS2-TSPAN8 fusion
+TCGA-OR-A5KV-01	KDM6A	X	44974715	FUNDC1	X	44542101	frameshift	GRCh37	47	405	SOMATIC	KDM6A-FUNDC1 fusion
+TCGA-OR-A5KV-01	JADE3	X	47058345	SSX2	X	52700578	in-frame	GRCh37	38	214	SOMATIC	JADE3-SSX2 fusion
+TCGA-OR-A5KV-01	REPS2	X	16947134	APOO	X	23880952	in-frame	GRCh37	3	6	SOMATIC	REPS2-APOO fusion
+TCGA-OR-A5KV-01	GNL3L	X	54532585	PAGE5	X	55221375	in-frame	GRCh37	1	4	SOMATIC	GNL3L-PAGE5 fusion
+TCGA-OR-A5KW-01	BRMS1L	14	35834923	ZNF839	14	102338816	in-frame	GRCh37	2	17	SOMATIC	BRMS1L-ZNF839 fusion
+TCGA-OR-A5KW-01	ARFGAP2	11	47171426	PACSIN3	11	47178487	in-frame	GRCh37	1	2	SOMATIC	ARFGAP2-PACSIN3 fusion
+TCGA-OR-A5KX-01	ARHGAP23	17	38482678	RPL23	17	38853105	frameshift	GRCh37	6	24	SOMATIC	ARHGAP23-RPL23 fusion
+TCGA-OR-A5KX-01	FN3KRP	17	82726602	KCNQ1	11	2847767	in-frame	GRCh37	3	34	SOMATIC	FN3KRP-KCNQ1 fusion
+TCGA-OR-A5KX-01	PPP1R16A	8	144490212	SLC52A2	8	144360115		GRCh37	4	26	SOMATIC	PPP1R16A-SLC52A2 fusion
+TCGA-OR-A5KX-01	PPP3R1	2	68252125	WDR92	2	68144715	frameshift	GRCh37	5	9	SOMATIC	PPP3R1-WDR92 fusion
+TCGA-OR-A5KX-01	FKBP8	19	18541679	HAUS8	19	17073335	frameshift	GRCh37	4	9	SOMATIC	FKBP8-HAUS8 fusion
+TCGA-OR-A5KX-01	GIPC1	19	14491656	CYP4F22	19	15548108		GRCh37	1	12	SOMATIC	GIPC1-CYP4F22 fusion
+TCGA-OR-A5KX-01	ZNF626	19	20661444	ADGRE5	19	14388450	frameshift	GRCh37	1	12	SOMATIC	ZNF626-ADGRE5 fusion
+TCGA-OR-A5KX-01	CDH12	5	22505270	BNIP3L	8	26505307		GRCh37	1	11	SOMATIC	CDH12-BNIP3L fusion
+TCGA-OR-A5KX-01	PRLR	5	35118061	CDH12	5	22505364		GRCh37	1	10	SOMATIC	PRLR-CDH12 fusion
+TCGA-OR-A5KX-01	CDK12	17	39463117	LRRC37A11P	17	39034170		GRCh37	1	9	SOMATIC	CDK12-LRRC37A11P fusion
+TCGA-OR-A5KX-01	ASF1B	19	14136348	GIPC1	19	14491743		GRCh37	1	5	SOMATIC	ASF1B-GIPC1 fusion
+TCGA-OR-A5KX-01	DNAJC21	5	34929916	SGCZ	8	14324204	frameshift	GRCh37	1	5	SOMATIC	DNAJC21-SGCZ fusion
+TCGA-OR-A5KY-01	CHD3	17	7893935	RAD51C	17	58709859	in-frame	GRCh37	17	88	SOMATIC	CHD3-RAD51C fusion
+TCGA-OR-A5KY-01	PPP1R37	19	45093527	BCAM	19	44811225	in-frame	GRCh37	14	54	SOMATIC	PPP1R37-BCAM fusion
+TCGA-OR-A5KY-01	B4GALT5	20	49713576	ASIP	20	34260365		GRCh37	12	32	SOMATIC	B4GALT5-ASIP fusion
+TCGA-OR-A5KY-01	TSPAN18	11	44727287	PIK3R2	19	18166160		GRCh37	8	37	SOMATIC	TSPAN18-PIK3R2 fusion
+TCGA-OR-A5KY-01	ASB3	2	53786821	MTA3	2	42640173		GRCh37	4	15	SOMATIC	ASB3-MTA3 fusion
+TCGA-OR-A5KY-01	FHOD3	18	36372744	ESRRB	14	76482016	in-frame	GRCh37	2	22	SOMATIC	FHOD3-ESRRB fusion
+TCGA-OR-A5KY-01	ALDH3A2	17	19671956	EIF5A	17	7309615	in-frame	GRCh37	2	21	SOMATIC	ALDH3A2-EIF5A fusion
+TCGA-OR-A5KY-01	AMBRA1	11	46493608	LRP4	11	46876830	in-frame	GRCh37	1	21	SOMATIC	AMBRA1-LRP4 fusion
+TCGA-OR-A5KY-01	AHSA2	2	61186497	C2orf74	2	61162842	frameshift	GRCh37	3	10	SOMATIC	AHSA2-C2orf74 fusion
+TCGA-OR-A5KY-01	TMEM248	7	66942024	ATOH8	2	85763991	in-frame	GRCh37	2	12	SOMATIC	TMEM248-ATOH8 fusion
+TCGA-OR-A5KY-01	ALDH2	12	111798242	ACTB	7	5529663	in-frame	GRCh37	1	10	SOMATIC	ALDH2-ACTB fusion
+TCGA-OR-A5KY-01	CTDNEP1	17	7246026	SHBG	17	7630416	frameshift	GRCh37	1	2	SOMATIC	CTDNEP1-SHBG fusion
+TCGA-OR-A5KZ-01	VPS41	7	38754702	CEP41	7	130428018	in-frame	GRCh37	3	23	SOMATIC	VPS41-CEP41 fusion
+TCGA-OR-A5KZ-01	UBR2	6	42642481	NDUFS2	1	161214156	frameshift	GRCh37	1	1	SOMATIC	UBR2-NDUFS2 fusion
+TCGA-OR-A5L6-01	PLBD2	12	113358890	CIDEC	3	9878511	in-frame	GRCh37	25	95	SOMATIC	PLBD2-CIDEC fusion
+TCGA-OR-A5L6-01	CLK1	2	200854616	NAPRT	8	143577943	frameshift	GRCh37	11	82	SOMATIC	CLK1-NAPRT fusion
+TCGA-OR-A5LB-01	FAM19A4	3	68880730	TMF1	3	69048562	in-frame	GRCh37	14	63	SOMATIC	FAM19A4-TMF1 fusion
+TCGA-OR-A5LB-01	LMBR1	7	156724112	CHMP1A	16	89647331	frameshift	GRCh37	2	1	SOMATIC	LMBR1-CHMP1A fusion
+TCGA-OR-A5LD-01	ZXDC	3	126466155	UROC1	3	126482485	frameshift	GRCh37	3	10	SOMATIC	ZXDC-UROC1 fusion
+TCGA-OR-A5LD-01	AUTS2	7	70698620	CDH8	16	61901473	frameshift	GRCh37	1	5	SOMATIC	AUTS2-CDH8 fusion
+TCGA-OR-A5LD-01	KIF18B	17	44947628	C1QL1	17	44960367		GRCh37	1	3	SOMATIC	KIF18B-C1QL1 fusion
+TCGA-OR-A5LE-01	CCDC117	22	28773025	TNNI2	11	1841272		GRCh37	31	76	SOMATIC	CCDC117-TNNI2 fusion
+TCGA-OR-A5LG-01	MAP3K9	14	70749933	MED6	14	70593378	in-frame	GRCh37	3	33	SOMATIC	MAP3K9-MED6 fusion
+TCGA-OR-A5LG-01	MED6	14	70596611	MAP3K9	14	70761182	in-frame	GRCh37	2	22	SOMATIC	MED6-MAP3K9 fusion
+TCGA-OR-A5LJ-01	TNS1	2	217835091	CATIP	2	218327959		GRCh37	4	53	SOMATIC	TNS1-CATIP fusion
+TCGA-OR-A5LL-01	NOTCH2NL	1	146228709	FCGR3B	1	161630388		GRCh37	5	48	SOMATIC	NOTCH2NL-FCGR3B fusion
+TCGA-OR-A5LL-01	MMACHC	1	45500413	TTC23L	5	34896770	in-frame	GRCh37	1	9	SOMATIC	MMACHC-TTC23L fusion
+TCGA-OR-A5LL-01	ZNF616	19	52130501	TRAPPC8	18	31931523	frameshift	GRCh37	1	4	SOMATIC	ZNF616-TRAPPC8 fusion
+TCGA-OR-A5LM-01	CMTR1	6	37473601	SMIM13	6	11134403	frameshift	GRCh37	3	24	SOMATIC	CMTR1-SMIM13 fusion
+TCGA-OR-A5LO-01	CELF1	11	47483453	FNBP4	11	47720086	in-frame	GRCh37	18	123	SOMATIC	CELF1-FNBP4 fusion
+TCGA-OR-A5LO-01	QRICH1	3	49076709	ACOT2	14	73574908	in-frame	GRCh37	5	146	SOMATIC	QRICH1-ACOT2 fusion
+TCGA-OR-A5LO-01	FCN2	9	134886564	COL5A1	9	134822998	frameshift	GRCh37	12	42	SOMATIC	FCN2-COL5A1 fusion
+TCGA-OR-A5LO-01	VPS26A	10	69133047	KIF1BP	10	69041564	in-frame	GRCh37	12	37	SOMATIC	VPS26A-KIF1BP fusion
+TCGA-OR-A5LO-01	MINOS1	1	19597109	GSE1	16	85665976	in-frame	GRCh37	11	28	SOMATIC	MINOS1-GSE1 fusion
+TCGA-OR-A5LO-01	RAB40C	16	618260	PRR35	16	563256		GRCh37	2	61	SOMATIC	RAB40C-PRR35 fusion
+TCGA-OR-A5LO-01	PGPEP1	19	18342911	ALPL	1	21553978		GRCh37	7	40	SOMATIC	PGPEP1-ALPL fusion
+TCGA-OR-A5LO-01	RASSF3	12	64610743	DAZAP2	12	51240343	frameshift	GRCh37	4	21	SOMATIC	RASSF3-DAZAP2 fusion
+TCGA-OR-A5LO-01	FOXO3	6	108561829	LACE1	6	108519697	in-frame	GRCh37	3	11	SOMATIC	FOXO3-LACE1 fusion
+TCGA-OR-A5LO-01	GBF1	10	102370860	NOLC1	10	102159193	in-frame	GRCh37	3	8	SOMATIC	GBF1-NOLC1 fusion
+TCGA-OR-A5LO-01	WRAP53	17	7689701	AHCY	20	34281165	in-frame	GRCh37	2	11	SOMATIC	WRAP53-AHCY fusion
+TCGA-OR-A5LO-01	CMIP	16	81445541	BCO1	16	81262136	frameshift	GRCh37	2	7	SOMATIC	CMIP-BCO1 fusion
+TCGA-OR-A5LO-01	AP1B1	22	29342285	RFPL1S	22	29442129		GRCh37	2	5	SOMATIC	AP1B1-RFPL1S fusion
+TCGA-OR-A5LO-01	FOXK2	17	82520307	TNFSF13	17	7559846	frameshift	GRCh37	1	9	SOMATIC	FOXK2-TNFSF13 fusion
+TCGA-OR-A5LO-01	CAPZB	1	19485436	MUC22	6	31025502	frameshift	GRCh37	2	4	SOMATIC	CAPZB-MUC22 fusion
+TCGA-OR-A5LO-01	REPS2	X	17006344	TXLNG	X	16818574	frameshift	GRCh37	2	4	SOMATIC	REPS2-TXLNG fusion
+TCGA-OR-A5LR-01	TYW1B	7	72826855	STX5	11	62807628	frameshift	GRCh37	1	5	SOMATIC	TYW1B-STX5 fusion
+TCGA-OR-A5LS-01	IL6R	1	154435156	TDRD10	1	154547409	frameshift	GRCh37	2	20	SOMATIC	IL6R-TDRD10 fusion
+TCGA-OU-A5PI-01	HNRNPA2B1	7	26200572	HSD17B10	X	53433886	in-frame	GRCh37	5	10	SOMATIC	HNRNPA2B1-HSD17B10 fusion
+TCGA-OU-A5PI-01	ST3GAL2	16	70438949	VAC14	16	70772172		GRCh37	5	6	SOMATIC	ST3GAL2-VAC14 fusion
+TCGA-OU-A5PI-01	PLCB1	20	8757178	WTIP	19	34490376	in-frame	GRCh37	2	6	SOMATIC	PLCB1-WTIP fusion
+TCGA-OU-A5PI-01	CC2D2A	4	15480827	BST1	4	15711807	in-frame	GRCh37	2	1	SOMATIC	CC2D2A-BST1 fusion
+TCGA-P6-A5OF-01	YPEL3	16	30095252	EXD3	9	137324143	in-frame	GRCh37	25	125	SOMATIC	YPEL3-EXD3 fusion
+TCGA-P6-A5OF-01	DCP2	5	112992770	IL17B	5	149377025	in-frame	GRCh37	8	24	SOMATIC	DCP2-IL17B fusion
+TCGA-P6-A5OF-01	GNB1	1	1839190	TSC2	16	2079032		GRCh37	5	17	SOMATIC	GNB1-TSC2 fusion
+TCGA-P6-A5OF-01	CPSF1	8	144400924	TONSL	8	144429336	frameshift	GRCh37	1	7	SOMATIC	CPSF1-TONSL fusion
+TCGA-P6-A5OF-01	ASB4	7	95536550	DYNC1I1	7	95804721		GRCh37	2	2	SOMATIC	ASB4-DYNC1I1 fusion
+TCGA-PA-A5YG-01	KCNQ1	11	2778037	DUSP8	11	1565934		GRCh37	11	73	SOMATIC	KCNQ1-DUSP8 fusion
+TCGA-PK-A5H8-01	DNAJC4	11	64232477	IGF2	11	2131698		GRCh37	6	1	SOMATIC	DNAJC4-IGF2 fusion
+TCGA-PK-A5H8-01	MAMSTR	19	48715832	IGF2	11	2131700		GRCh37	3	3	SOMATIC	MAMSTR-IGF2 fusion
+TCGA-PK-A5H9-01	ARAP1	11	72722065	IGF2	11	2132106		GRCh37	1000	1000	SOMATIC	ARAP1-IGF2 fusion
+TCGA-PK-A5H9-01	CLUH	17	2689386	IGF2	11	2139208		GRCh37	1000	1000	SOMATIC	CLUH-IGF2 fusion
+TCGA-PK-A5H9-01	GALNT2	1	230255303	IGF2	11	2131760		GRCh37	1000	1000	SOMATIC	GALNT2-IGF2 fusion
+TCGA-PK-A5HA-01	RCC1L	7	75052711	DENND1A	9	123403490	in-frame	GRCh37	9	64	SOMATIC	RCC1L-DENND1A fusion
+TCGA-PK-A5HA-01	MCCC1	3	183086693	LAMP3	3	183154391	frameshift	GRCh37	4	5	SOMATIC	MCCC1-LAMP3 fusion
+TCGA-PK-A5HA-01	PPIP5K1	15	43534974	FRMD5	15	43888872	frameshift	GRCh37	3	7	SOMATIC	PPIP5K1-FRMD5 fusion
+TCGA-PK-A5HA-01	PXK	3	58333090	RPP14	3	58310507	frameshift	GRCh37	1	13	SOMATIC	PXK-RPP14 fusion
+TCGA-PK-A5HA-01	NUP85	17	75205794	TMEM94	17	75471800		GRCh37	1	12	SOMATIC	NUP85-TMEM94 fusion
+TCGA-PK-A5HA-01	SEMA6C	1	151139976	VPS72	1	151185950	frameshift	GRCh37	1	4	SOMATIC	SEMA6C-VPS72 fusion
+TCGA-PK-A5HB-01	RUSC2	9	35490172	U82695.5	X	153398920		GRCh37	33	45	SOMATIC	RUSC2-U82695.5 fusion
+TCGA-PK-A5HB-01	RRP7A	22	42518005	PACSIN2	22	42879169	in-frame	GRCh37	8	133	SOMATIC	RRP7A-PACSIN2 fusion
+TCGA-PK-A5HB-01	TSGA10	2	99154837	ZRANB3	2	135224517		GRCh37	1	5	SOMATIC	TSGA10-ZRANB3 fusion

acc_tcga_pan_can_atlas_2018/data_timeline_sample_acquisition.txt ADDED Viewed

	@@ -0,0 +1,92 @@

+PATIENT_ID	START_DATE	STOP_DATE	EVENT_TYPE	SAMPLE_ID	METHOD_OF_SAMPLE_PROCUREMENT	COUNTRY	MAXIMUM_TUMOR_DIMENSION	SAMPLE_PRESCREENED	TUMOR_NECROSIS_PERCENT	TUMOR_NUCLEI_PERCENT	TUMOR_WEIGHT	VESSEL_USED
+TCGA-OR-A5J1	-7		Sample Acquisition	TCGA-OR-A5J1-01	Surgical Resection	Australia	7.0	Yes	0	90	54	Cassette
+TCGA-OR-A5J2	1		Sample Acquisition	TCGA-OR-A5J2-01	Surgical Resection	Brazil	18	Yes	0	80	395	Cassette
+TCGA-OR-A5J3	0		Sample Acquisition	TCGA-OR-A5J3-01	Surgical Resection	Brazil	6	Yes	0	80	447	Cassette
+TCGA-OR-A5J4	0		Sample Acquisition	TCGA-OR-A5J4-01	Surgical Resection	Brazil	14	Yes	5	70	50	Cassette
+TCGA-OR-A5J5	0		Sample Acquisition	TCGA-OR-A5J5-01	Surgical Resection	Brazil	11	Yes	0	90	52	Cassette
+TCGA-OR-A5J6	13		Sample Acquisition	TCGA-OR-A5J6-01	Surgical Resection	Brazil	20	Yes	10	70	445	Cassette
+TCGA-OR-A5J7	0		Sample Acquisition	TCGA-OR-A5J7-01	Surgical Resection	Brazil	12	Yes	5	70	111	Cassette
+TCGA-OR-A5J8	30		Sample Acquisition	TCGA-OR-A5J8-01	Surgical Resection	Brazil	19	Yes	20	70	231	Cassette
+TCGA-OR-A5J9	0		Sample Acquisition	TCGA-OR-A5J9-01	Surgical Resection	Brazil	11	Yes	0	90	309	Cassette
+TCGA-OR-A5JA	5		Sample Acquisition	TCGA-OR-A5JA-01	Surgical Resection	Australia	15	Yes	5	80	257	Cassette
+TCGA-OR-A5JB	168		Sample Acquisition	TCGA-OR-A5JB-01	Surgical Resection	Australia	8.0	Yes	0	80	51	Cassette
+TCGA-OR-A5JC	0		Sample Acquisition	TCGA-OR-A5JC-01	Surgical Resection	Australia	13.5	Yes	0	80	59	Cassette
+TCGA-OR-A5JD	0		Sample Acquisition	TCGA-OR-A5JD-01	Surgical Resection	Australia	9.8	Yes	0	80	60	Cassette
+TCGA-OR-A5JE	0		Sample Acquisition	TCGA-OR-A5JE-01	Surgical Resection	Australia	2.2	Yes	10	90	86	Cassette
+TCGA-OR-A5JF	0		Sample Acquisition	TCGA-OR-A5JF-01	Surgical Resection	Australia	6.3	Yes	0	80	52	Cassette
+TCGA-OR-A5JG	15		Sample Acquisition	TCGA-OR-A5JG-01	Surgical Resection	Australia	6.5	Yes	0	80	72	Cassette
+TCGA-OR-A5JH	0		Sample Acquisition	TCGA-OR-A5JH-01	Surgical Resection	Australia	12.0	Yes	10	70	29	Cassette
+TCGA-OR-A5JI	0		Sample Acquisition	TCGA-OR-A5JI-01	Surgical Resection	Australia	4.0	Yes	5	80	30	Cassette
+TCGA-OR-A5JJ	0		Sample Acquisition	TCGA-OR-A5JJ-01	Surgical Resection	Australia	9.5	Yes	20	80	56	Cassette
+TCGA-OR-A5JK	4		Sample Acquisition	TCGA-OR-A5JK-01	Surgical Resection	Australia	14.0	Yes	0	90	79	Cassette
+TCGA-OR-A5JL	0		Sample Acquisition	TCGA-OR-A5JL-01	Surgical Resection	Australia	3.8	Yes	0	80	95	Cassette
+TCGA-OR-A5JM	1		Sample Acquisition	TCGA-OR-A5JM-01	Surgical Resection	Australia	10.0	Yes	10	90	121	Cassette
+TCGA-OR-A5JO	0		Sample Acquisition	TCGA-OR-A5JO-01	Surgical Resection	Australia	5.0	Yes	0	80	54	Cassette
+TCGA-OR-A5JP	0		Sample Acquisition	TCGA-OR-A5JP-01	Surgical Resection	Australia	10.0	Yes	0	90	12	Cassette
+TCGA-OR-A5JQ	-8		Sample Acquisition	TCGA-OR-A5JQ-01	Surgical Resection	Australia	8.5	Yes	0	80	103	Cassette
+TCGA-OR-A5JR	0		Sample Acquisition	TCGA-OR-A5JR-01	Surgical Resection	United States	5	Yes	0	90	90	Cryovial
+TCGA-OR-A5JS	0		Sample Acquisition	TCGA-OR-A5JS-01	Surgical Resection	United States	7.2	Yes	0	90	151	Cryovial
+TCGA-OR-A5JT	0		Sample Acquisition	TCGA-OR-A5JT-01	Surgical Resection	United States	11.5	Yes	10	80	228	Cryovial
+TCGA-OR-A5JU	0		Sample Acquisition	TCGA-OR-A5JU-01	Surgical Resection	United States	8.5	Yes	10	70	174	Cryovial
+TCGA-OR-A5JV	0		Sample Acquisition	TCGA-OR-A5JV-01	Surgical Resection	United States	17	Yes	0	90	111	Cryovial
+TCGA-OR-A5JW	0		Sample Acquisition	TCGA-OR-A5JW-01	Surgical Resection	United States	8.6	Yes	0	90	233	Cryovial
+TCGA-OR-A5JX	0		Sample Acquisition	TCGA-OR-A5JX-01	Surgical Resection	United States	10	Yes	0	80	207	Cryovial
+TCGA-OR-A5JY	15		Sample Acquisition	TCGA-OR-A5JY-01	Surgical Resection	United States	17.1	Yes	20	80	268	Cryovial
+TCGA-OR-A5JZ	0		Sample Acquisition	TCGA-OR-A5JZ-01	Surgical Resection	United States	8.5	Yes	10	90	170	Cryovial
+TCGA-OR-A5K0	0		Sample Acquisition	TCGA-OR-A5K0-01	Surgical Resection	United States	9	Yes	0	90	236	Cryovial
+TCGA-OR-A5K1	0		Sample Acquisition	TCGA-OR-A5K1-01	Surgical Resection	United States	6.2	Yes	0	90	195	Cryovial
+TCGA-OR-A5K2	0		Sample Acquisition	TCGA-OR-A5K2-01	Surgical Resection	United States	14.5	Yes	0	90	243	Cryovial
+TCGA-OR-A5K3	0		Sample Acquisition	TCGA-OR-A5K3-01	Surgical Resection	United States	16	Yes	0	90	202	Cryovial
+TCGA-OR-A5K4	0		Sample Acquisition	TCGA-OR-A5K4-01	Surgical Resection	United States	15.5	Yes	0	90	195	Cryovial
+TCGA-OR-A5K5	0		Sample Acquisition	TCGA-OR-A5K5-01	Surgical Resection	United States	14.5	Yes	0	90	155	Cryovial
+TCGA-OR-A5K6	0		Sample Acquisition	TCGA-OR-A5K6-01	Surgical Resection	United States	8	Yes	10	80	129	Cryovial
+TCGA-OR-A5K8	0		Sample Acquisition	TCGA-OR-A5K8-01	Surgical Resection	United States	9	Yes	0	90	828	Cassette
+TCGA-OR-A5K9	0		Sample Acquisition	TCGA-OR-A5K9-01	Surgical Resection	United States	9.8	Yes	0	90	141	Cryovial
+TCGA-OR-A5KB	0		Sample Acquisition	TCGA-OR-A5KB-01	Surgical Resection	United States	13	Yes	20	70	105	Cassette
+TCGA-OR-A5KO	-2		Sample Acquisition	TCGA-OR-A5KO-01	Surgical Resection	Germany	5.8	Yes	10	90	109	Cassette
+TCGA-OR-A5KP	-3		Sample Acquisition	TCGA-OR-A5KP-01	Surgical Resection	Germany	8.0	Yes	10	80	172	Cassette
+TCGA-OR-A5KQ	-4		Sample Acquisition	TCGA-OR-A5KQ-01	Surgical Resection	Germany	7.5	Yes	0	90	87	Cassette
+TCGA-OR-A5KS	1		Sample Acquisition	TCGA-OR-A5KS-01	Surgical Resection	Germany	9.0	Yes	5	80	184	Cassette
+TCGA-OR-A5KT	-7		Sample Acquisition	TCGA-OR-A5KT-01	Surgical Resection	Germany	5.0	Yes	0	80	161	Cassette
+TCGA-OR-A5KU	-13		Sample Acquisition	TCGA-OR-A5KU-01	Surgical Resection	Germany	13.0	Yes	20	70	84	Cassette
+TCGA-OR-A5KV	-2		Sample Acquisition	TCGA-OR-A5KV-01	Surgical Resection	Germany		Yes	0	90	97	Cassette
+TCGA-OR-A5KW	-7		Sample Acquisition	TCGA-OR-A5KW-01	Surgical Resection	Germany	7.1	Yes	10	80	250	Cassette
+TCGA-OR-A5KX	-3		Sample Acquisition	TCGA-OR-A5KX-01	Surgical Resection	Germany	18.0	Yes	10	80	224	Cassette
+TCGA-OR-A5KY	77		Sample Acquisition	TCGA-OR-A5KY-01	Surgical Resection	Germany	10	Yes	0	80	130	Cassette
+TCGA-OR-A5KZ	-3		Sample Acquisition	TCGA-OR-A5KZ-01	Surgical Resection	Germany	8.0	Yes	10	90	129	Cassette
+TCGA-OR-A5L1	-2		Sample Acquisition	TCGA-OR-A5L1-01	Surgical Resection	Germany	9.0	Yes	0	80	196	Cassette
+TCGA-OR-A5L2	-4		Sample Acquisition	TCGA-OR-A5L2-01	Surgical Resection	Germany	18.0	Yes	0	80	131	Cassette
+TCGA-OR-A5L3	-8		Sample Acquisition	TCGA-OR-A5L3-01	Surgical Resection	Germany	3.0	Yes	0	90	98	Cassette
+TCGA-OR-A5L4	-5		Sample Acquisition	TCGA-OR-A5L4-01	Surgical Resection	Germany	11.0	Yes	0	90	122	Cassette
+TCGA-OR-A5L5	-5		Sample Acquisition	TCGA-OR-A5L5-01	Surgical Resection	Germany	2.5	Yes	0	80	120	Cassette
+TCGA-OR-A5L6	-6		Sample Acquisition	TCGA-OR-A5L6-01	Surgical Resection	Germany	12.5	Yes	0	80	137	Cassette
+TCGA-OR-A5L8	-11		Sample Acquisition	TCGA-OR-A5L8-01	Surgical Resection	Germany	6	Yes	0	90	98	Cassette
+TCGA-OR-A5L9	-13		Sample Acquisition	TCGA-OR-A5L9-01	Surgical Resection	Germany	10.5	Yes	0	90	25	Cassette
+TCGA-OR-A5LA	-16		Sample Acquisition	TCGA-OR-A5LA-01	Surgical Resection	Germany	8.0	Yes	0	90	52	Cassette
+TCGA-OR-A5LB	0		Sample Acquisition	TCGA-OR-A5LB-01	Surgical Resection	Germany	5.5	Yes	0	90	53	Cassette
+TCGA-OR-A5LC	16		Sample Acquisition	TCGA-OR-A5LC-01	Surgical Resection	Germany	8.0	Yes	0	60	30	Cassette
+TCGA-OR-A5LD	-3		Sample Acquisition	TCGA-OR-A5LD-01	Surgical Resection	Germany	17.0	Yes	0	90	307	Cassette
+TCGA-OR-A5LE	-1		Sample Acquisition	TCGA-OR-A5LE-01	Surgical Resection	Germany	17.0	Yes	20	70	66	Cassette
+TCGA-OR-A5LF	-4		Sample Acquisition	TCGA-OR-A5LF-01	Surgical Resection	Germany	7.0	Yes	10	70	135	Cassette
+TCGA-OR-A5LG	0		Sample Acquisition	TCGA-OR-A5LG-01	Surgical Resection	Germany	7.2	Yes	0	90	215	Cassette
+TCGA-OR-A5LH	-4		Sample Acquisition	TCGA-OR-A5LH-01	Surgical Resection	Germany	6	Yes	20	70	169	Cassette
+TCGA-OR-A5LI	0		Sample Acquisition	TCGA-OR-A5LI-01	Surgical Resection	Germany	17.0	Yes	20	80	161	Cassette
+TCGA-OR-A5LJ	27		Sample Acquisition	TCGA-OR-A5LJ-01	Surgical Resection	Germany	13.0	Yes	10	70	156	Cassette
+TCGA-OR-A5LK	0		Sample Acquisition	TCGA-OR-A5LK-01	Surgical Resection	France	8.2	Yes	0	80	152	Cassette
+TCGA-OR-A5LL	0		Sample Acquisition	TCGA-OR-A5LL-01	Surgical Resection	France	9	Yes	0	80	196	Cassette
+TCGA-OR-A5LM	0		Sample Acquisition	TCGA-OR-A5LM-01	Surgical Resection	France	12.0	Yes	0	80	191	Cassette
+TCGA-OR-A5LN	0		Sample Acquisition	TCGA-OR-A5LN-01	Surgical Resection	France	8.3	Yes	0	90	141	Cassette
+TCGA-OR-A5LO	0		Sample Acquisition	TCGA-OR-A5LO-01	Surgical Resection	France	13.5	Yes	0	90	209	Cassette
+TCGA-OR-A5LP	0		Sample Acquisition	TCGA-OR-A5LP-01	Surgical Resection	France	8.5	Yes	0	90	154	Cassette
+TCGA-OR-A5LR	0		Sample Acquisition	TCGA-OR-A5LR-01	Surgical Resection	France	6.7	Yes	0	90	126	Cassette
+TCGA-OR-A5LS	0		Sample Acquisition	TCGA-OR-A5LS-01	Surgical Resection	France	9.3	Yes	0	90	151	Cassette
+TCGA-OR-A5LT	0		Sample Acquisition	TCGA-OR-A5LT-01	Surgical Resection	France	14.0	Yes	0	80	287	Cassette
+TCGA-OU-A5PI	0		Sample Acquisition	TCGA-OU-A5PI-01	Surgical Resection	United States	13.5	Yes	0	80	220	Cryovial
+TCGA-P6-A5OF	20		Sample Acquisition	TCGA-P6-A5OF-01	Surgical Resection	United States	10.5	Yes	0	80	200	Cryovial
+TCGA-P6-A5OH	0		Sample Acquisition	TCGA-P6-A5OH-01	Surgical Resection	United States	10	Yes	0	95	200	Cryovial
+TCGA-PA-A5YG	0		Sample Acquisition	TCGA-PA-A5YG-01	Surgical Resection	United States	7.8	Yes	0	90	580	Cryomold
+TCGA-PK-A5H8	0		Sample Acquisition	TCGA-PK-A5H8-01	Surgical Resection	Canada	19.5	Yes	15	85	95	Cryovial
+TCGA-PK-A5H9	0		Sample Acquisition	TCGA-PK-A5H9-01	Surgical Resection	Canada	10	Yes	0	100	95	Cryovial
+TCGA-PK-A5HA	0		Sample Acquisition	TCGA-PK-A5HA-01	Surgical Resection	Canada	5	Yes	0	99	95	Cryovial
+TCGA-PK-A5HB	0		Sample Acquisition	TCGA-PK-A5HB-01	Surgical Resection	Canada	12	Yes	5	95	103	Cryovial
+TCGA-PK-A5HC	0		Sample Acquisition	TCGA-PK-A5HC-01	Surgical Resection	Canada	12.5	Yes	20	80	118	Cryovial

acc_tcga_pan_can_atlas_2018/data_timeline_status.txt ADDED Viewed

	@@ -0,0 +1,255 @@

+PATIENT_ID	START_DATE	STOP_DATE	EVENT_TYPE	STATUS	AGE_AT_INITIAL_PATHOLOGIC_DIAGNOSIS	PATHOLOGIC_STAGE	CLINICAL_M	PATHOLOGIC_N	PATHOLOGIC_T	ANATOMIC_SITE	DIAGNOSIS_METHOD	TUMOR_STATUS	PRIMARY_THERAPY_OUTCOME_SUCCESS	VITAL_STATUS
+TCGA-OR-A5J2	1677		STATUS	DECEASED
+TCGA-OR-A5J4	423		STATUS	DECEASED
+TCGA-OR-A5J5	365		STATUS	DECEASED
+TCGA-OR-A5J7	490		STATUS	DECEASED
+TCGA-OR-A5J8	579		STATUS	DECEASED
+TCGA-OR-A5JA	922		STATUS	DECEASED
+TCGA-OR-A5JB	551		STATUS	DECEASED
+TCGA-OR-A5JC	1750		STATUS	DECEASED
+TCGA-OR-A5JE	2105		STATUS	DECEASED
+TCGA-OR-A5JG	541		STATUS	DECEASED
+TCGA-OR-A5JM	562		STATUS	DECEASED
+TCGA-OR-A5JU	289		STATUS	DECEASED
+TCGA-OR-A5JY	552		STATUS	DECEASED
+TCGA-OR-A5K2	994		STATUS	DECEASED
+TCGA-OR-A5K9	344		STATUS	DECEASED
+TCGA-OR-A5KY	391		STATUS	DECEASED
+TCGA-OR-A5KZ	125		STATUS	DECEASED
+TCGA-OR-A5LB	1204		STATUS	DECEASED
+TCGA-OR-A5LC	159		STATUS	DECEASED
+TCGA-OR-A5LD	1197		STATUS	DECEASED
+TCGA-OR-A5LE	662		STATUS	DECEASED
+TCGA-OR-A5LF	445		STATUS	DECEASED
+TCGA-OR-A5LH	2385		STATUS	DECEASED
+TCGA-OR-A5LJ	1105		STATUS	DECEASED
+TCGA-OR-A5LL	1613		STATUS	DECEASED
+TCGA-P6-A5OF	207		STATUS	DECEASED
+TCGA-P6-A5OH	0		STATUS	DECEASED
+TCGA-OR-A5J1	1355		STATUS	DECEASED
+TCGA-OR-A5JJ	490		STATUS	DECEASED
+TCGA-OR-A5K5	498		STATUS	DECEASED
+TCGA-OR-A5L2	1852		STATUS	DECEASED
+TCGA-OR-A5LI	436		STATUS	DECEASED
+TCGA-OR-A5LO	2405		STATUS	DECEASED
+TCGA-OR-A5J1	0		STATUS	Initial Diagnosis	58	stage II	m0	n0	t2
+TCGA-OR-A5J2	0		STATUS	Initial Diagnosis	44	stage IV	m1	n0	t3
+TCGA-OR-A5J3	0		STATUS	Initial Diagnosis	23	stage III	m0	n0	t3
+TCGA-OR-A5J4	0		STATUS	Initial Diagnosis	23	stage IV	m1	n1	t3
+TCGA-OR-A5J5	0		STATUS	Initial Diagnosis	30	stage III	m0	n0	t4
+TCGA-OR-A5J6	0		STATUS	Initial Diagnosis	29	stage II	m0	n0	t2
+TCGA-OR-A5J7	0		STATUS	Initial Diagnosis	30	stage III	m0	n0	t3
+TCGA-OR-A5J8	0		STATUS	Initial Diagnosis	66	stage III	m0	n0	t3
+TCGA-OR-A5J9	0		STATUS	Initial Diagnosis	22	stage II	m0	n0	t2
+TCGA-OR-A5JA	0		STATUS	Initial Diagnosis	53	stage IV	m1	n0	t4
+TCGA-OR-A5JB	0		STATUS	Initial Diagnosis	52	stage IV	m1	n0	t4
+TCGA-OR-A5JC	0		STATUS	Initial Diagnosis	37
+TCGA-OR-A5JD	0		STATUS	Initial Diagnosis	57	stage II	m0	n0	t2
+TCGA-OR-A5JE	0		STATUS	Initial Diagnosis	17	stage I	m0	n0	t1
+TCGA-OR-A5JF	0		STATUS	Initial Diagnosis	69	stage II	m0	n0	t2
+TCGA-OR-A5JG	0		STATUS	Initial Diagnosis	61	stage IV	m1	n1	t4
+TCGA-OR-A5JH	0		STATUS	Initial Diagnosis	32	stage II	m0	n0	t2
+TCGA-OR-A5JI	0		STATUS	Initial Diagnosis	22	stage I	m0	n0	t1
+TCGA-OR-A5JJ	0		STATUS	Initial Diagnosis	65	stage IV	m1	n1	t4
+TCGA-OR-A5JK	0		STATUS	Initial Diagnosis	49	stage IV	m1	n0	t4
+TCGA-OR-A5JL	0		STATUS	Initial Diagnosis	36	stage I	m0	n0	t1
+TCGA-OR-A5JM	0		STATUS	Initial Diagnosis	25	stage IV	m1	n0	t4
+TCGA-OR-A5JO	0		STATUS	Initial Diagnosis	26	stage I	m0	n0	t1
+TCGA-OR-A5JP	0		STATUS	Initial Diagnosis	40	stage II	m0	n0	t2
+TCGA-OR-A5JQ	0		STATUS	Initial Diagnosis	26	stage II	m0	n0	t2
+TCGA-OR-A5JR	0		STATUS	Initial Diagnosis	45	stage I	m0	n0	t1
+TCGA-OR-A5JS	0		STATUS	Initial Diagnosis	65	stage II	m0	n0	t2
+TCGA-OR-A5JT	0		STATUS	Initial Diagnosis	65	stage II	m0	n0	t2
+TCGA-OR-A5JU	0		STATUS	Initial Diagnosis	58	stage III	m0	n0	t3
+TCGA-OR-A5JV	0		STATUS	Initial Diagnosis	55	stage II	m0	n0	t2
+TCGA-OR-A5JW	0		STATUS	Initial Diagnosis	47	stage II	m0	n0	t2
+TCGA-OR-A5JX	0		STATUS	Initial Diagnosis	50	stage III	m0	n0	t3
+TCGA-OR-A5JY	0		STATUS	Initial Diagnosis	68	stage IV	m1	n1	t4
+TCGA-OR-A5JZ	0		STATUS	Initial Diagnosis	60	stage II	m0	n0	t2
+TCGA-OR-A5K0	0		STATUS	Initial Diagnosis	69	stage II	m0	n0	t2
+TCGA-OR-A5K1	0		STATUS	Initial Diagnosis	48	stage II	m0	n0	t2
+TCGA-OR-A5K2	0		STATUS	Initial Diagnosis	32	stage III	m0	n0	t4
+TCGA-OR-A5K3	0		STATUS	Initial Diagnosis	53	stage II	m0	n0	t2
+TCGA-OR-A5K4	0		STATUS	Initial Diagnosis	64	stage III	m0	n0	t4
+TCGA-OR-A5K5	0		STATUS	Initial Diagnosis	59	stage III	m0	n0	t3
+TCGA-OR-A5K6	0		STATUS	Initial Diagnosis	56	stage II	m0	n0	t2
+TCGA-OR-A5K8	0		STATUS	Initial Diagnosis	39	stage II	m0	n0	t2
+TCGA-OR-A5K9	0		STATUS	Initial Diagnosis	61	stage II	m0	n0	t2
+TCGA-OR-A5KB	0		STATUS	Initial Diagnosis	61	stage II	m0	n0	t2
+TCGA-OR-A5KO	0		STATUS	Initial Diagnosis	39	stage IV	m1	n0	t4
+TCGA-OR-A5KP	0		STATUS	Initial Diagnosis	45	stage II	m0	n0	t2
+TCGA-OR-A5KQ	0		STATUS	Initial Diagnosis	20	stage II	m0	n0	t2
+TCGA-OR-A5KS	0		STATUS	Initial Diagnosis	72	stage II	m0	n0	t2
+TCGA-OR-A5KT	0		STATUS	Initial Diagnosis	44	stage I	m0	n0	t1
+TCGA-OR-A5KU	0		STATUS	Initial Diagnosis	37	stage II	m0	n0	t2
+TCGA-OR-A5KV	0		STATUS	Initial Diagnosis	17	stage III	m0	n1	t2
+TCGA-OR-A5KW	0		STATUS	Initial Diagnosis	55	stage III	m0	n1	t2
+TCGA-OR-A5KX	0		STATUS	Initial Diagnosis	25	stage III	m0	n1	t2
+TCGA-OR-A5KY	0		STATUS	Initial Diagnosis	23	stage IV	m1	n1	t4
+TCGA-OR-A5KZ	0		STATUS	Initial Diagnosis	42	stage II	m0	n0	t2
+TCGA-OR-A5L1	0		STATUS	Initial Diagnosis	37	stage II	m0	n0	t2
+TCGA-OR-A5L2	0		STATUS	Initial Diagnosis	83	stage II	m0	n0	t2
+TCGA-OR-A5L3	0		STATUS	Initial Diagnosis	67	stage I	m0	n0	t1
+TCGA-OR-A5L4	0		STATUS	Initial Diagnosis	48	stage III	m0	n0	t4
+TCGA-OR-A5L5	0		STATUS	Initial Diagnosis	77	stage I	m0	n0	t1
+TCGA-OR-A5L6	0		STATUS	Initial Diagnosis	60	stage II	m0	n0	t2
+TCGA-OR-A5L8	0		STATUS	Initial Diagnosis	36	stage II	m0	n0	t2
+TCGA-OR-A5L9	0		STATUS	Initial Diagnosis	53	stage II	m0	n0	t2
+TCGA-OR-A5LA	0		STATUS	Initial Diagnosis	52	stage II	m0	n0	t2
+TCGA-OR-A5LB	0		STATUS	Initial Diagnosis	59	stage IV	m1	n0	t4
+TCGA-OR-A5LC	0		STATUS	Initial Diagnosis	71	stage IV	m1	n0	t4
+TCGA-OR-A5LD	0		STATUS	Initial Diagnosis	52	stage III	m0	n0	t4
+TCGA-OR-A5LE	0		STATUS	Initial Diagnosis	14	stage II	m0	n0	t2
+TCGA-OR-A5LF	0		STATUS	Initial Diagnosis	74	stage III	m0	n0	t3
+TCGA-OR-A5LG	0		STATUS	Initial Diagnosis	46	stage III	m0	n0	t3
+TCGA-OR-A5LH	0		STATUS	Initial Diagnosis	36	stage II	m0	n0	t2
+TCGA-OR-A5LI	0		STATUS	Initial Diagnosis	42	stage IV	m1	n0	t4
+TCGA-OR-A5LJ	0		STATUS	Initial Diagnosis	54	stage IV	m1	n1	t2
+TCGA-OR-A5LK	0		STATUS	Initial Diagnosis	62	stage II	m0	n0	t2
+TCGA-OR-A5LL	0		STATUS	Initial Diagnosis	75	stage II	m0	n0	t2
+TCGA-OR-A5LM	0		STATUS	Initial Diagnosis	23	stage II	m0	n0	t2
+TCGA-OR-A5LN	0		STATUS	Initial Diagnosis	31	stage II	m0	n0	t2
+TCGA-OR-A5LO	0		STATUS	Initial Diagnosis	61	stage II	m0	n0	t2
+TCGA-OR-A5LP	0		STATUS	Initial Diagnosis	37	stage II	m0	n0	t2
+TCGA-OR-A5LR	0		STATUS	Initial Diagnosis	30	stage II	m0	n0	t2
+TCGA-OR-A5LS	0		STATUS	Initial Diagnosis	34	stage II	m0	n0	t2
+TCGA-OR-A5LT	0		STATUS	Initial Diagnosis	57	stage III	m0	n0	t3
+TCGA-OU-A5PI	0		STATUS	Initial Diagnosis	53	stage IV	m1	n1	t2
+TCGA-P6-A5OF	0		STATUS	Initial Diagnosis	55	stage III	m0	n0	t4
+TCGA-P6-A5OH	0		STATUS	Initial Diagnosis	59	stage IV	m1	n0	t4
+TCGA-PA-A5YG	0		STATUS	Initial Diagnosis	51	stage II	m0	n0	t2
+TCGA-PK-A5H8	0		STATUS	Initial Diagnosis	42	stage II	m0	n0	t2
+TCGA-PK-A5H9	0		STATUS	Initial Diagnosis	27	stage II	m0	n0	t2
+TCGA-PK-A5HA	0		STATUS	Initial Diagnosis	63	stage I	m0	n0	t1
+TCGA-PK-A5HB	0		STATUS	Initial Diagnosis	63
+TCGA-PK-A5HC	0		STATUS	Initial Diagnosis	44	stage III	m0	n0	t4
+TCGA-OR-A5J1	754		STATUS	Distant Metastasis						Peritoneal Surfaces	Imaging
+TCGA-OR-A5J2	289		STATUS	Distant Metastasis						Soft Tissue	Imaging
+TCGA-OR-A5J3	53		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5J3	783		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5J3	1149		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5J3	1149		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5J4	126		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5J4	126		STATUS	Locoregional Recurrence						Lymph Node(s)	Imaging
+TCGA-OR-A5J4	126		STATUS	Locoregional Recurrence						Peritoneal Surfaces	Imaging
+TCGA-OR-A5J5	50		STATUS	Locoregional Recurrence						Vena Cava Thrombus	Imaging
+TCGA-OR-A5J7	162		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5J7	162		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5J7	162		STATUS	Locoregional Recurrence						Retroperitoneal Lymph Nodes	Imaging
+TCGA-OR-A5J8	530		STATUS	Locoregional Recurrence						Peritoneal Surfaces	Imaging
+TCGA-OR-A5J9	414		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5JE	477		STATUS	Locoregional Recurrence							Pathology
+TCGA-OR-A5JM	72		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5JS	166		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5JU	268		STATUS	Distant Metastasis						Ovarian	Pathology
+TCGA-OR-A5JV	953		STATUS	New Primary Tumor						Lymph Node(s)	Pathology
+TCGA-OR-A5JY	75		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5JY	111		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5JZ	247		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5JZ	247		STATUS	Distant Metastasis						Soft Tissue Of Pancreatic Tail	Imaging
+TCGA-OR-A5K0	659		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5K1	826		STATUS	Locoregional Recurrence						Peritoneal Surfaces	Imaging
+TCGA-OR-A5K2	97		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5K5	108		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5K5	108		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5K6	391		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5K6	391		STATUS	Locoregional Recurrence						Peritoneal Surfaces	Imaging
+TCGA-OR-A5K6	391		STATUS	Distant Metastasis						Liver	Pathology
+TCGA-OR-A5K6	391		STATUS	Distant Metastasis						Peritoneal Surfaces	Pathology
+TCGA-OR-A5K9	236		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5K9	236		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5K9	236		STATUS	Locoregional Recurrence						Lymph Node(s)	Imaging
+TCGA-OR-A5K9	236		STATUS	Locoregional Recurrence						Peritoneal Surfaces	Imaging
+TCGA-OR-A5KB	214		STATUS	Distant Metastasis						Soft Tissue	Pathology
+TCGA-OR-A5KO	541		STATUS	Distant Metastasis						Liver	Pathology
+TCGA-OR-A5KO	541		STATUS	Distant Metastasis						Lung	Pathology
+TCGA-OR-A5KP	1250		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5KP	1250		STATUS	Distant Metastasis						Liver	Pathology
+TCGA-OR-A5KT	2099		STATUS	Distant Metastasis						Pancreas	Imaging
+TCGA-OR-A5KT	2099		STATUS	Distant Metastasis						Pancreas	Pathology
+TCGA-OR-A5KV	1116		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5KX	62		STATUS	Distant Metastasis						Bone	Imaging
+TCGA-OR-A5KX	62		STATUS	Distant Metastasis						Bone	Pathology
+TCGA-OR-A5KX	62		STATUS	Distant Metastasis						Lung	Pathology
+TCGA-OR-A5KX	62		STATUS	Distant Metastasis						Lymph Node(s)	Pathology
+TCGA-OR-A5KY	178		STATUS	Locoregional Recurrence						Peritoneal Surfaces	Imaging
+TCGA-OR-A5KZ	36		STATUS	Distant Metastasis						Bone
+TCGA-OR-A5KZ	36		STATUS	Locoregional Recurrence						Abdomen	Imaging
+TCGA-OR-A5L1	685		STATUS	Distant Metastasis						Bone	Imaging
+TCGA-OR-A5LB	611		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5LC	50		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5LC	50		STATUS	Distant Metastasis						Lymph Node(s)	Imaging
+TCGA-OR-A5LD	444		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5LE	265		STATUS	Locoregional Recurrence						Peritoneal Surfaces	Imaging
+TCGA-OR-A5LG	1393		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5LI	61		STATUS	Distant Metastasis						Bone	Imaging
+TCGA-OR-A5LI	61		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-OR-A5LI	61		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5LJ	98		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5LL	213		STATUS	Distant Metastasis						Liver	Pathology
+TCGA-OR-A5LO	153		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-OR-A5LO	153		STATUS	Distant Metastasis						Lymph Node(s)	Imaging
+TCGA-OU-A5PI	351		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-P6-A5OF	143		STATUS	Distant Metastasis						Liver	Imaging
+TCGA-P6-A5OF	143		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-PK-A5HB	213		STATUS	Distant Metastasis						Lung	Pathology
+TCGA-PK-A5HC	131		STATUS	Distant Metastasis						Lung	Imaging
+TCGA-PK-A5HC	167		STATUS	Locoregional Recurrence						Peritoneal Surfaces	Imaging
+TCGA-OR-A5J3	2091		STATUS	Last Follow Up								With Tumor	Complete Remission/Response	Alive
+TCGA-OR-A5J6	2703		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5J9	1352		STATUS	Last Follow Up								With Tumor	Complete Remission/Response	Alive
+TCGA-OR-A5JD	3038		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5JF	2015		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5JH	2110		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5JI	2331		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5JK	1497		STATUS	Last Follow Up								Tumor Free	Partial Remission/Response	Alive
+TCGA-OR-A5JL	2056		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5JO	1194		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5JP	464		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5JQ	1103		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5JR	3688		STATUS	Last Follow Up
+TCGA-OR-A5JS	383		STATUS	Last Follow Up
+TCGA-OR-A5JT	907		STATUS	Last Follow Up								With Tumor	Stable Disease	Alive
+TCGA-OR-A5JV	2023		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5JW	2202		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5JX	950		STATUS	Last Follow Up
+TCGA-OR-A5JZ	822		STATUS	Last Follow Up								With Tumor	Progressive Disease	Alive
+TCGA-OR-A5K0	1029		STATUS	Last Follow Up
+TCGA-OR-A5K1	3289		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5K3	3465		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5K4	1082		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5K6	1493		STATUS	Last Follow Up								With Tumor	Complete Remission/Response	Alive
+TCGA-OR-A5K8	749		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5KB	741		STATUS	Last Follow Up								With Tumor	Progressive Disease	Alive
+TCGA-OR-A5KO	1414		STATUS	Last Follow Up								With Tumor	Complete Remission/Response	Alive
+TCGA-OR-A5KP	2777		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5KQ	2677		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5KS	2549		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5KT	2895		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5KU	4673		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5KV	3878		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5KW	2076		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5KX	1364		STATUS	Last Follow Up								With Tumor	Progressive Disease	Alive
+TCGA-OR-A5L1	1781		STATUS	Last Follow Up
+TCGA-OR-A5L3	4628		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5L4	967		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5L5	1317		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5L6	861		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5L8	885		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5L9	871		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5LA	719		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5LG	1589		STATUS	Last Follow Up
+TCGA-OR-A5LK	2740		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5LM	1858		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5LN	2342		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5LP	1857		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5LR	853		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5LS	1096		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OR-A5LT	549		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-OU-A5PI	1171		STATUS	Last Follow Up								With Tumor	Stable Disease	Alive
+TCGA-PA-A5YG	756		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-PK-A5H8	3623		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-PK-A5H9	616		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-PK-A5HA	1201		STATUS	Last Follow Up								Tumor Free	Complete Remission/Response	Alive
+TCGA-PK-A5HB	1293		STATUS	Last Follow Up
+TCGA-PK-A5HC	679		STATUS	Last Follow Up

acc_tcga_pan_can_atlas_2018/data_timeline_treatment.txt ADDED Viewed

	@@ -0,0 +1,49 @@

+PATIENT_ID	START_DATE	STOP_DATE	EVENT_TYPE	TREATMENT_TYPE	TREATMENT_SUBTYPE	AGENT	NUMBER_OF_CYCLES	PRESCRIBED_DOSE	PRESCRIBED_DOSE_UNITS	REGIMEN_NUMBER	REGIMEN_INDICATION	REGIMEN_INDICATION_NOTES	MEASURE_OF_RESPONSE	CLINICAL_TRIAL_DRUG_CLASSIFICATION	ROUTE_OF_ADMINISTRATION	ROUTE_OF_ADMINISTRATION-2	THERAPY_ONGOING	TOTAL_DOSE	TOTAL_DOSE_UNITS	TX_ON_CLINICAL_TRIAL	ANATOMIC_TREATMENT_SITE	COURSE_NUMBER	NUMBER_OF_FRACTIONS	RADIATION_DOSAGE	RADIATION_TREATMENT_ONGOING	RADIATION_TYPE	RADIATION_UNITS	PHARM_REGIMEN	STEM_CELL_TRANSPLANTATION	STEM_CELL_TRANSPLANTATION_TYPE
+TCGA-OR-A5J8	107	138	Treatment	Radiation Therapy		Radiation 1															Primary Tumor Field		25	4500	No	External	cgy
+TCGA-OR-A5JF	52	97	Treatment	Radiation Therapy		Radiation 1							complete response								Primary Tumor Field				No	External
+TCGA-OR-A5JK	39	78	Treatment	Radiation Therapy		Radiation 1							stable disease								Primary Tumor Field		28	50.4	No	External	gy
+TCGA-OR-A5JM	378	439	Treatment	Targeted Molecular Therapy		Sunitinib							clinical progressive disease				No			No
+TCGA-OR-A5JM	378	439	Treatment	Targeted Molecular Therapy		Ketoconazole							clinical progressive disease				No			No
+TCGA-OR-A5JM	134	196	Treatment	Radiation Therapy		Radiation 1							radiographic progressive disease												No	Internal
+TCGA-OR-A5JS	49	83	Treatment	Radiation Therapy		Radiation 1															Primary Tumor Field			55	No	External	gy
+TCGA-OR-A5JS	49	83	Treatment	Radiation Therapy		Radiation 2															Regional Site			45	No	External	gy
+TCGA-OR-A5JT	49	111	Treatment	Radiation Therapy		Radiation 1															Primary Tumor Field			50.6	No	External	gy
+TCGA-OR-A5JU	40	70	Treatment	Radiation Therapy		Radiation 1							radiographic progressive disease								Primary Tumor Field		25	55	No	External	gy
+TCGA-OR-A5JU	36	70	Treatment	Radiation Therapy		Radiation 2							radiographic progressive disease								Regional Site		25	45	No	External	gy
+TCGA-OR-A5JW	53	88	Treatment	Radiation Therapy		Radiation 1															Primary Tumor Field			52.8	No	External	gy
+TCGA-OR-A5JW	53	88	Treatment	Radiation Therapy		Radiation 2															Regional Site			42.8	No	External	gy
+TCGA-OR-A5JX	57	91	Treatment	Radiation Therapy		Radiation 1															Primary Tumor Field		25	55	No	External	gy
+TCGA-OR-A5JX	48	91	Treatment	Radiation Therapy		Radiation 2															Regional Site		25	45	No	External	gy
+TCGA-OR-A5JY	78	93	Treatment	Chemotherapy		Capecitabine											No			No
+TCGA-OR-A5JY	78	93	Treatment	Radiation Therapy		Radiation 1															Primary Tumor Field			30	No	External	gy
+TCGA-OR-A5JZ	16	85	Treatment	Radiation Therapy		Radiation 1															Primary Tumor Field			55	No	External	gy
+TCGA-OR-A5K2	118	298	Treatment	Chemotherapy		Doxorubicin											No			No
+TCGA-OR-A5K2	118	298	Treatment	Chemotherapy		Cisplatin											No			No
+TCGA-OR-A5K2	118	299	Treatment	Chemotherapy		Carboplatin											No			No
+TCGA-OR-A5K2	118	298	Treatment	Chemotherapy		Etoposide											No			No
+TCGA-OR-A5K2	39	74	Treatment	Radiation Therapy		Radiation 1															Primary Tumor Field			52.8	No	External	gy
+TCGA-OR-A5K2	39	74	Treatment	Radiation Therapy		Radiation 2															Regional Site			43.2	No	External	gy
+TCGA-OR-A5K4	18	102	Treatment	Radiation Therapy		Radiation 1							complete response								Primary Tumor Field				No	External
+TCGA-OR-A5K5	30	103	Treatment	Radiation Therapy		Radiation 1							radiographic progressive disease												No
+TCGA-OU-A5PI	69	239	Treatment	Chemotherapy		Etoposide							stable disease				No			No
+TCGA-OU-A5PI	725	878	Treatment	Immunotherapy		Bevacizumab							stable disease				No			No
+TCGA-OU-A5PI	69	239	Treatment	Chemotherapy		Doxorubicin							stable disease				No			No
+TCGA-OU-A5PI	55	239	Treatment	Chemotherapy		Cisplatin							stable disease				No			No
+TCGA-OU-A5PI	69	239	Treatment	Chemotherapy		Mitotane							stable disease				No			No
+TCGA-OU-A5PI	605	694	Treatment	Chemotherapy		Carboplatin							stable disease				No			No
+TCGA-OU-A5PI	605	694	Treatment	Chemotherapy		Etoposide							stable disease				No			No
+TCGA-OU-A5PI	605	694	Treatment	Chemotherapy		Doxorubicin							stable disease				No			No
+TCGA-OU-A5PI	725	817	Treatment	Chemotherapy		Carboplatin							stable disease				No			No
+TCGA-OU-A5PI	725	817	Treatment	Chemotherapy		Streptozocin							stable disease				No			No
+TCGA-OU-A5PI	476	486	Treatment	Radiation Therapy		Radiation 1							stable disease								Distant Recurrence		4	48	No	External	gy
+TCGA-PK-A5HB	968	1029	Treatment	Targeted Molecular Therapy		Sorafenib							clinical progressive disease				No			Yes
+TCGA-PK-A5HB	1099	1099	Treatment	Radiation Therapy		Radiation 1							radiographic progressive disease								Distant Site		1	8	No	External	gy
+TCGA-PK-A5HB	1172	1192	Treatment	Radiation Therapy		Radiation 10															Distant Recurrence		15	40	No	External	gy
+TCGA-PK-A5HB	1113	1113	Treatment	Radiation Therapy		Radiation 2							partial response								Distant Site		1	10	No	External	gy
+TCGA-PK-A5HB	1058	1072	Treatment	Radiation Therapy		Radiation 3							partial response								Distant Site		10	30	No	External	gy
+TCGA-PK-A5HB	1289	1303	Treatment	Radiation Therapy		Radiation 4															Distant Site		10	30	No	External	gy
+TCGA-PK-A5HB	1289	1303	Treatment	Radiation Therapy		Radiation 5															Distant Site		10	30	No	External	gy
+TCGA-PK-A5HB	1289	1303	Treatment	Radiation Therapy		Radiation 6															Distant Recurrence		10	30	No	External	gy
+TCGA-PK-A5HB	1289	1303	Treatment	Radiation Therapy		Radiation 7															Distant Site		10	30	No	External	gy
+TCGA-PK-A5HB	1233	1246	Treatment	Radiation Therapy		Radiation 8															Distant Site		10	30	No	External	gy
+TCGA-PK-A5HB	1233	1246	Treatment	Radiation Therapy		Radiation 9															Distant Site		10	30	No	External	gy

acc_tcga_pan_can_atlas_2018/meta_armlevel_cna.txt ADDED Viewed

	@@ -0,0 +1,10 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: GENERIC_ASSAY
+generic_assay_type: ARMLEVEL_CNA
+datatype: CATEGORICAL
+stable_id: armlevel_cna
+profile_name: Putative arm-level copy-number from GISTIC
+profile_description: Putative arm-level copy-number from GISTIC 2.0.
+data_filename: data_armlevel_cna.txt
+show_profile_in_analysis_tab: true
+generic_entity_meta_properties: NAME,DESCRIPTION

acc_tcga_pan_can_atlas_2018/meta_clinical_patient.txt ADDED Viewed

	@@ -0,0 +1,4 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: CLINICAL
+datatype: PATIENT_ATTRIBUTES
+data_filename: data_clinical_patient.txt

acc_tcga_pan_can_atlas_2018/meta_clinical_sample.txt ADDED Viewed

	@@ -0,0 +1,4 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: CLINICAL
+datatype: SAMPLE_ATTRIBUTES
+data_filename: data_clinical_sample.txt

acc_tcga_pan_can_atlas_2018/meta_cna.txt ADDED Viewed

	@@ -0,0 +1,8 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: COPY_NUMBER_ALTERATION
+datatype: DISCRETE
+stable_id: gistic
+show_profile_in_analysis_tab: true
+profile_description: Putative copy-number from GISTIC 2.0. Values: -2 = homozygous deletion; -1 = hemizygous deletion; 0 = neutral / no change; 1 = gain; 2 = high level amplification.
+profile_name: Putative copy-number alterations from GISTIC
+data_filename: data_cna.txt

acc_tcga_pan_can_atlas_2018/meta_cna_hg19_seg.txt ADDED Viewed

	@@ -0,0 +1,9 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: COPY_NUMBER_ALTERATION
+datatype: SEG
+stable_id: acc_tcga_pan_can_atlas_2018_segment
+show_profile_in_analysis_tab: false
+description: Segment data for the TCGA PanCanAtlas study.
+profile_name: Segment data values
+reference_genome_id: hg19
+data_filename: data_cna_hg19.seg

acc_tcga_pan_can_atlas_2018/meta_gene_panel_matrix.txt ADDED Viewed

	@@ -0,0 +1,4 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: GENE_PANEL_MATRIX
+datatype: GENE_PANEL_MATRIX
+data_filename: data_gene_panel_matrix.txt

acc_tcga_pan_can_atlas_2018/meta_genetic_ancestry.txt ADDED Viewed

	@@ -0,0 +1,10 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: GENERIC_ASSAY
+generic_assay_type: GENETIC_ANCESTRY
+datatype: LIMIT-VALUE
+stable_id: genetic_ancestry
+profile_name: Genetic Ancestry
+profile_description: Genetic ancestries were determined using five different methods as described in Carrot-Zhang et al (2020). These consensus calls were created based on the ancestral population that received the majority of assignments for each patient. The original data is <a href="https://gdc.cancer.gov/about-data/publications/CCG-AIM-2020">here</a>.
+data_filename: data_genetic_ancestry.txt
+show_profile_in_analysis_tab: true
+generic_entity_meta_properties: NAME

acc_tcga_pan_can_atlas_2018/meta_log2_cna.txt ADDED Viewed

	@@ -0,0 +1,8 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: COPY_NUMBER_ALTERATION
+datatype: LOG2-VALUE
+stable_id: log2CNA
+show_profile_in_analysis_tab: false
+profile_description: Log2 copy-number values for each gene (from Affymetrix SNP6).
+profile_name: Log2 copy-number values
+data_filename: data_log2_cna.txt

acc_tcga_pan_can_atlas_2018/meta_methylation_hm27_hm450_merged.txt ADDED Viewed

	@@ -0,0 +1,11 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: GENERIC_ASSAY
+generic_assay_type: METHYLATION
+datatype: LIMIT-VALUE
+stable_id: methylation_hm27_hm450_merge
+profile_name: Methylation (HM27 and HM450 merge)
+profile_description: Methylation between-platform (hm27 and hm450) normalization values.
+data_filename: data_methylation_hm27_hm450_merged.txt
+show_profile_in_analysis_tab: true
+value_sort_order: DESC
+generic_entity_meta_properties: NAME,DESCRIPTION,TRANSCRIPT_ID

acc_tcga_pan_can_atlas_2018/meta_mrna_seq_v2_rsem.txt ADDED Viewed

	@@ -0,0 +1,8 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+stable_id: rna_seq_v2_mrna
+genetic_alteration_type: MRNA_EXPRESSION
+datatype: CONTINUOUS
+show_profile_in_analysis_tab: FALSE
+profile_name: mRNA Expression, RSEM (Batch normalized from Illumina HiSeq_RNASeqV2)
+profile_description:mRNA Expression, RSEM (Batch normalized from Illumina HiSeq_RNASeqV2)
+data_filename: data_mrna_seq_v2_rsem.txt

acc_tcga_pan_can_atlas_2018/meta_mrna_seq_v2_rsem_zscores_ref_all_samples.txt ADDED Viewed

	@@ -0,0 +1,8 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: MRNA_EXPRESSION
+datatype: Z-SCORE
+stable_id: rna_seq_v2_mrna_median_all_sample_Zscores
+show_profile_in_analysis_tab: TRUE
+profile_name: mRNA expression z-scores relative to all samples (log RNA Seq V2 RSEM)
+profile_description: Log-transformed mRNA expression z-scores compared to the expression distribution of all samples (RNA Seq V2 RSEM).
+data_filename: data_mrna_seq_v2_rsem_zscores_ref_all_samples.txt

acc_tcga_pan_can_atlas_2018/meta_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt ADDED Viewed

	@@ -0,0 +1,8 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: MRNA_EXPRESSION
+datatype: Z-SCORE
+data_filename: data_mrna_seq_v2_rsem_zscores_ref_diploid_samples.txt
+stable_id: rna_seq_v2_mrna_median_Zscores
+show_profile_in_analysis_tab: TRUE
+profile_description: mRNA expression z-scores (RNA Seq V2 RSEM) compared to the expression distribution of each gene tumors that are diploid for this gene.
+profile_name: mRNA expression z-scores relative to diploid samples (RNA Seq V2 RSEM)

acc_tcga_pan_can_atlas_2018/meta_mutations.txt ADDED Viewed

	@@ -0,0 +1,8 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: MUTATION_EXTENDED
+datatype: MAF
+stable_id: mutations
+show_profile_in_analysis_tab: true
+profile_description: Mutation data from whole exome sequencing of 92 Adrenocortical Carcinoma samples.
+profile_name: Mutations
+data_filename: data_mutations.txt

acc_tcga_pan_can_atlas_2018/meta_resource_definition.txt ADDED Viewed

	@@ -0,0 +1,3 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+resource_type: DEFINITION
+data_filename: data_resource_definition.txt

acc_tcga_pan_can_atlas_2018/meta_resource_patient.txt ADDED Viewed

	@@ -0,0 +1,3 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+resource_type: PATIENT
+data_filename: data_resource_patient.txt

acc_tcga_pan_can_atlas_2018/meta_rppa.txt ADDED Viewed

	@@ -0,0 +1,8 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: PROTEIN_LEVEL
+datatype: LOG2-VALUE
+stable_id: rppa
+show_profile_in_analysis_tab: false
+profile_name: Protein expression (RPPA)
+profile_description: Protein expression measured by reverse-phase protein array
+data_filename: data_rppa.txt

acc_tcga_pan_can_atlas_2018/meta_rppa_zscores.txt ADDED Viewed

	@@ -0,0 +1,8 @@

+cancer_study_identifier: acc_tcga_pan_can_atlas_2018
+genetic_alteration_type: PROTEIN_LEVEL
+datatype: Z-SCORE
+stable_id: rppa_Zscores
+show_profile_in_analysis_tab: true
+profile_name: Protein expression z-scores (RPPA)
+profile_description: Protein expression, measured by reverse-phase protein array, Z-scores
+data_filename: data_rppa_zscores.txt