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  1. 2017-2020/P_BIOPRO.XPT +3 -0
  2. 2017-2020/P_BMX.XPT +3 -0
  3. 2017-2020/P_BPXO.XPT +3 -0
  4. 2017-2020/P_CBC.XPT +3 -0
  5. 2017-2020/P_CDQ.XPT +3 -0
  6. 2017-2020/P_DEMO.XPT +3 -0
  7. 2017-2020/P_DIQ.XPT +3 -0
  8. 2017-2020/P_GHB.XPT +3 -0
  9. 2017-2020/P_HDL.XPT +3 -0
  10. 2017-2020/P_HSCRP.XPT +3 -0
  11. 2017-2020/P_MCQ.XPT +3 -0
  12. 2017-2020/P_PAQ.XPT +3 -0
  13. 2017-2020/P_SMQ.XPT +3 -0
  14. 2017-2020/P_TCHOL.XPT +3 -0
  15. 2017-2020/P_TRIGLY.XPT +3 -0
  16. README.md +22 -0
  17. extended_data/2001-02/L40_2_B.XPT +3 -0
  18. extended_data/2001-02/L40_B.XPT +3 -0
  19. extended_data/2003-04/DEMO_C.XPT +3 -0
  20. extended_data/2003-04/L10_C.XPT +3 -0
  21. extended_data/2003-04/L13AM_C.XPT +3 -0
  22. extended_data/2003-04/L13_C.XPT +3 -0
  23. extended_data/2003-04/L25_C.XPT +3 -0
  24. extended_data/2003-04/L40_C.XPT +3 -0
  25. extended_data/2003-04/MCQ_C.XPT +3 -0
  26. extended_data/2005-06/BIOPRO_D.XPT +3 -0
  27. extended_data/2005-06/CBC_D.XPT +3 -0
  28. extended_data/2005-06/DEMO_D.XPT +3 -0
  29. extended_data/2005-06/GHB_D.XPT +3 -0
  30. extended_data/2005-06/HDL_D.XPT +3 -0
  31. extended_data/2005-06/MCQ_D.XPT +3 -0
  32. extended_data/2005-06/TRIGLY_D.XPT +3 -0
  33. extended_data/2007-08/BIOPRO_E.XPT +3 -0
  34. extended_data/2007-08/CBC_E.XPT +3 -0
  35. extended_data/2007-08/DEMO_E.XPT +3 -0
  36. extended_data/2007-08/GHB_E.XPT +3 -0
  37. extended_data/2007-08/HDL_E.XPT +3 -0
  38. extended_data/2007-08/MCQ_E.XPT +3 -0
  39. extended_data/2007-08/TRIGLY_E.XPT +3 -0
  40. extended_data/2009-10/BIOPRO_F.XPT +3 -0
  41. extended_data/2009-10/CBC_F.XPT +3 -0
  42. extended_data/2009-10/DEMO_F.XPT +3 -0
  43. extended_data/2009-10/GHB_F.XPT +3 -0
  44. extended_data/2009-10/HDL_F.XPT +3 -0
  45. extended_data/2009-10/MCQ_F.XPT +3 -0
  46. extended_data/2009-10/TRIGLY_F.XPT +3 -0
  47. extended_data/2011-12/BIOPRO_G.XPT +3 -0
  48. extended_data/2011-12/CBC_G.XPT +3 -0
  49. extended_data/2011-12/DEMO_G.XPT +3 -0
  50. extended_data/2011-12/GHB_G.XPT +3 -0
2017-2020/P_BIOPRO.XPT ADDED
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README.md ADDED
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+ # NHANES Data for Validation
2
+
3
+ Place NHANES XPT files here to run `tests/validate_on_nhanes.py`.
4
+
5
+ ## Expected structure
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+
7
+ ```
8
+ nhanes_data_dump/
9
+ ├── 2017-2020/ # Primary cycle (P_BIOPRO.XPT, P_MCQ.XPT, P_CBC.XPT, etc.)
10
+ └── extended_data/
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+ ├── 2003-04/
12
+ ├── 2005-06/
13
+ ├── 2007-08/
14
+ ├── 2009-10/
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+ ├── 2011-12/
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+ ├── 2013-14/
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+ └── 2015-16/
18
+ ```
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+
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+ ## Download
21
+
22
+ Get data from [NHANES](https://wwwn.cdc.gov/nchs/nhanes/). The validation script uses the same file merges as the training notebook.
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