Split (1)

train · 370 rows

query stringlengths 37 229	positive listlengths 1 31	negative listlengths 120 120	cluster int64 0 17
Trajectory Recording and Analysis System for Cockroach Robot	[ "Hierarchical organization of rhesus macaque behavior", "Effects of food availability cycles on phase and period of activity/rest rhythm in Drosophila melanogaster", "Trimethylamine N-Oxide (TMAO) links peripheral insulin resistance and cognitive deficiencies in a senescence accelerated mouse model", "Hippoca...	[ "Morphology of immatures of the thelytokous ant, Monomorium triviale Wheeler (Formicidae: Myrmicinae: Solenopsidini) with descriptions of the larval caste dimorphism", "Caspase inhibition mitigates tau cleavage and neurotoxicity in iPSC-induced neurons with the V337M MAPT mutation", "Removing unwanted variation...	13
Colour Vision in Stomatopod Crustaceans: more questions than answers	[ "High-precision spatial analysis of mouse courtship vocalization behavior reveals sex and strain differences", "Interaction between sperm whales (Physeter macrocephalus) and northern bottlenose whales (Hyperoodon ampullatus) and deep-water trawlers in the Northwest Atlantic", "In pursuit of biomarkers for predi...	[ "CRISPR/Cas9 modified An. gambiae carrying kdr mutation L1014F functionally validate its contribution in insecticide resistance and interaction with metabolic enzymes.", "Regulation of neurogenesis and gliogenesis by the matricellular protein CCN2 in the mouse retina", "Inexpensive monitoring of flying insect a...	13
A playback paradox? Nathusius' bats, Pipistrellus nathusii, bypass mating and fueling opportunities on migratory transit flights	[ "Species-typical chemical signals mediate reproductive isolation in a teleost fish", "GoFish: A low-cost, open-source platform for closed-loop behavioural experiments on fish", "Behavioral dysregulation and monoaminergic deficits precede memory impairments in human tau-overexpressing (htau) mice", "Active vis...	[ "Genome-wide CRISPR activation screen identifies novel receptors for SARS-CoV-2 entry", "Targeting SARS-CoV-2 infection through CAR-T like bispecific T cell engagers incorporating ACE2", "Cargo-mediated mechanisms reduce inter-motor mechanical interference, promote load-sharing and enhance processivity in teams...	13
Hormonal contraceptives alter amphetamine place preference and responsivity in the intact female rat.	[ "Phenotypic architecture of sociality and its associated genetic polymorphisms in zebrafish", "Habit formation viewed as structural change in the behavioral network", "Changes in movement characteristics in response to private and social information acquisition of socially foraging fish", "Nest relief in the ...	[ "Inevitability of Red Queen evolution driven by organismic complexity and simple feedback via environmental modification", "Time Evolution of the Stroke Symptom-Herb Networks Based on TCM Prescriptions", "ABCC1/MRP1 exports cGAMP and modulates cGAS-dependent immunity", "The nuclear ubiquitin ligase adaptor SP...	8
Considering variance in pollinator responses to stressors can reveal potential for resilience	[ "Differences in running performance of single- and group-housed mice", "Evidence of learning walks related to scorpion home burrow navigation", "The evolution and biological correlates of hand preferences in anthropoid primates", "The gut microbiota affects the social network of honeybees", "Vocal traits of...	[ "Genetic drift from the out-of-Africa bottleneck leads to biased estimation of genetic architecture and selection", "Human methylome variation across Infinium 450K data on the Gene Expression Omnibus", "Predicting trait phenotypes from knowledge of the topology of gene networks", "Synthetic Biology Tool Devel...	16
Metformin modulates microbiota-derived inosine and ameliorates methamphetamine-induced anxiety and depression-like withdrawal symptoms in mice	[ "Cockroaches adjust body and appendages to traverse cluttered large obstacles", "Monkey Plays Pac-Man with Compositional Strategies and Hierarchical Decision-making", "Color is necessary for specialized face learning in the Northern paper wasp, Polistes fuscatus", "Amplitude discrimination is predictably affe...	[ "Self-assembled DNA nanostructures promote cell migration & differentiation of human umbilical vein endothelial cells", "Pentosan polysulfate inhibits attachment and infection by SARS-CoV-2 in vitro: insights into structural requirements for binding.", "Transient induction of cell cycle promoter Fam64a improves...	12
Effects of short-term isolation on social animals' behavior: an experimental case study of Japanese macaque	[ "Little evidence that Eurasian jays (Garrulus glandarius) protect their caches by responding to cues about a conspecific's desire and visual perspective", "Time-course RNASeq of Camponotus floridanus forager and nurse ant brains indicate links between plasticity in the biological clock and behavioral division of ...	[ "The neural code for face memory", "Resolving the molecular fingerprint of the distal carboxy tail in modulating CaV1 calcium dependent inactivation", "RNF213 loss of function reshapes vascular transcriptome and spliceosome leading to disrupted angiogenesis and aggravated vascular inflammatory responses.", "A...	13
Neuromuscular embodiment of feedback control elements in Drosophila flight	[ "Methods in Cognitive Pupillometry: Design, Preprocessing, and Statistical Analysis", "Agency as Planning for Known Unknowns", "Sights and sounds of dolphins, Tursiops truncatus, preying on native fish of San Diego Bay and offshore in the Pacific Ocean", "A gut-derived hormone switches dietary preference afte...	[ "Soft limbal niche maintains stem cell compartmentalization and function through YAP", "SARS-CoV-2 Nsp1 N-terminal and linker regions as a platform for host translational shutoff", "Gene identification and genome annotation in Caenorhabditis briggsae by high throughput 5' RNA end determination", "Microtubules...	13
Forced proximity promotes the formation of enduring cooperative relationships in vampire bats	[ "The evolution of coordination: A phylogenetic meta-analysis and systematic review", "Electroencephalographic Signatures of Canine Cognitive Dysfunction", "Understanding Chicks' Emotions: Are Eye Blinks & Facial Temperatures Reliable Indicators?", "Physiological stress responses to non-mimetic model brood par...	[ "Estimating movement rates between Eurasian and North American birds that are vectors of avian influenza (AI)", "Identification of a promiscuous conserved CTL epitope within the SARS-CoV-2 spike protein", "Mechanism of Tethered Agonist-Mediated Signaling by Polycystin-1", "Pyronaridine Protects Against SARS-C...	13
Adaptation of Drosophila larva foraging in response to changes in food distribution	[ "Reproductive skew, fitness costs, and winner-loser effects in social-dominance evolution", "Neuro-molecular characterization of fish cleaning interactions", "Evolution of innate behavioral strategies through competitive population dynamics", "Age-related change in adult chimpanzee social network integration"...	[ "Admp regulates tail bending by controlling the intercalation of the ventral epidermis through myosin phosphorylation.", "Genome sequence data reveal at least two distinct incursions of the tropical race 4 (TR4) variant of Fusarium wilt into South America", "Updating the steady state model of C4 photosynthesis"...	13
Gains and Losses Affect Learning Differentially at Low and High Attentional Load	[ "Neuroendocrine and behavioral measures of stress-reactivity in male goal-tracker and sign-tracker rats", "The interplay of wind and uplift facilitates over-water flight in facultative soaring birds", "A Hierarchical 3D-motion Learning Framework for Animal Spontaneous Behavior Mapping", "The adaptive value of...	[ "Effect of knee joint loading on chondrocyte mechano-vulnerability and severity of post-traumatic osteoarthritis induced by ACL-injury in mice", "Less is worse than none: ineffective adaptive foraging can destabilise food webs", "In an arms race between host and parasite, a lungworm's ability to infect a toad i...	5
Visual Field Analysis: a reliable method to score left- and right eye-use using automated tracking	[ "A Keller-Segel model for C elegans L1 aggregation", "Machine learning algorithms can predict tail biting outbreaks in pigs using feeding behaviour records", "Tonic endocannabinoid signaling supports sleep through development in both sexes.", "Responsive robotic prey reveal how predators adapt to predictabili...	[ "Out-of-sight or out-of-site? Forays and detection probabilities in single-season occupancy models", "Label-free imaging of collagen fibers in tissue slices using phase imaging with computational specificity", "A free classified advertising website is a high-risk unregulated source of domestic wild boar, pot-be...	5
The role of visual and olfactory cues in social decisions of guppies and zebrafish	[ "Digital embryos - A novel technical approach to investigate perceptual categorization in pigeons (Columba livia) using machine learning", "Song preferences predict the quality of vocal learning in zebra finches", "Description of the sound diversity of two species of tuco-tucos (Ctenomys torquatus and Ctenomys ...	[ "Evolutionary trade-offs between heat and cold tolerance limit responses to fluctuating climates", "Signal processing basics applied to Ecoacoustics", "Molecular insights into the μ-opioid receptorselective signaling", "Within and among population differences in cuticular hydrocarbons in the seabird tick Ixod...	13
Comparing the appetitive learning performance of six European honeybee subspecies in a common apiary	[ "Inhibitory control performance is repeatable across years and contexts in a wild bird population", "Effects of a 33-sequential beam galactic cosmic ray analog on male mouse behavior and evaluation of CDDO-EA as a radiation countermeasure", "Effects of a 33-ion sequential beam galactic cosmic ray analog on male...	[ "Changing in the hierarchical organization of local information dynamics during motor decision in the premotor cortex of primates", "Exploring the relationships between autozygosity, educational attainment, and cognitive ability in a contemporary, trans-ancestral American sample", "Identifying and correcting mu...	13
Detour learning ability and the effect of novel sensory cues on learning in Australian bull ants, Myrmecia midas	[ "Training with an auditory perceptual learning game transfers to speech in competition", "Self-organization in natural swarms of Photinus carolinus synchronous fireflies", "Detecting unreported recalls in memory experiments", "Decoding silence in free recall", "Social and physical environment independently ...	[ "Origin of diversity in spatial social dilemmas", "Deep Mutagenesis of a Transporter for Uptake of a Non-Native Substrate Identifies Conformationally Dynamic Regions", "The Mechanism of Neurite Outgrowth Induction by Novel Synthetic Retinobenzoic Acids", "TATTOO-seq delineates spatial and cell type-specific r...	13
Vocal plasticity in harbour seal pups	[ "Effects of Perinatal Fluoxetine Exposure on Novelty-induced Social and Non-Social Investigation Behaviors in a Seminatural Environment", "Home range and movement patterns of the Andean Fox Lycalopex culpaeus (Molina 1782) in Cotopaxi National Park, Ecuador", "A pilot study on the home range and movement patter...	[ "Investigation of extramammary sources of Group B Streptococcus reveals its unusual ecology and epidemiology in camels", "Huntington's disease age at motor onset is modified by the tandem hexamer repeat in TCERG1", "DevKidCC allows for robust classification and direct comparisons of kidney organoid datasets", ...	13
Delta variant with P681R critical mutation revealed by ultra-large atomic-scale ab initio simulation: Implications for the fundamentals of biomolecular interactions	[ "Possible Interference in Protein - Protein interaction as a new approach in microinhibition of respiratory pathogens on nasal- oral epithelium: An early on-screen study with reference toSARS-Cov-2-ACE2 binding interference", "Oxidative phase transition of heat shock factor-1", "Role of glycine-N-methyl transfe...	[ "Comethyl: A network-based methylome approach to investigate the multivariate nature of health and disease", "Modification of the SUMO activating enzyme subunit SAE2 directs SUMO isoform bias required for mitotic fidelity.", "Effects of Experimental Design, Genetic Architecture and Threshold on Power and False ...	7
High-Throughput Global Phosphoproteomic Profiling Using Phospho Heavy-Labeled-Spiketide FAIMS Stepped-CV DDA (pHASED)	[ "Peroxisomal ATPase ATAD1 acts in quality control of the protein import machinery", "A method to enrich polypeptidyl-tRNAs to capture snapshots of translation in the cell", "Identification of Transient Intermediates During Spliceosome Activation by Single Molecule Fluorescence Microscopy", "Saturation mutagen...	[ "Sequencing of Argonaute-bound miRNA/mRNA hybrids reveals regulation of the unfolded protein response by microRNA-320a", "The effector protein CgNLP1 of Colletotrichum gloeosporioides from Hevea brasiliensis disrupts nuclear localization of necrosis-induced transcription factor HbMYB8-like to suppress plant defen...	4
Molecular Dynamics Simulations of hydrophobic peptides that form β-hairpin structures in solution	[ "Computational and experimental studies of plasmodium falciparum protein PfAMA1 domain-II loop dynamics: implications in PfAMA1-PfRON2 binding event", "Computational and experimental studies of the breathing motion of a protein loop: implications in PfAMA1-PfRON2 late-stage binding event", "Membrane phosphoinos...	[ "A novel adhesive complex at the base of intestinal microvilli", "In Vivo Subcellular Mass Spectrometry Enables Proteo-Metabolomic Single-cell Systems Biology in a Chordate Embryo Developing to a Normally Behaving Tadpole (X. laevis)", "From the Modern Synthesis to the Molecular Synthesis: updating how we teach...	3
Structural basis for substrate recognition, ligation and activation by a hyperactive Asn peptide ligase from Viola yedoensis	[ "Allosteric regulation of the proteasomes catalytic sites by the proteasome activator PA28gamma/REGgamma", "Deep Mutational Engineering of broadly-neutralizing and picomolar affinity nanobodies to accommodate SARS-CoV-1 & 2 antigenic polymorphism", "Mutations in the spike RBD of SARS-CoV-2 omicron variant may i...	[ "Defective cyclophilin A induces TDP-43 proteinopathy: implications for amyotrophic lateral sclerosis and frontotemporal dementia", "Defects in autophagy lead to selective in vivo changes in turnover of cytosolic and organelle proteins in Arabidopsis", "Dynamic arrest and aging of biomolecular condensates are r...	1
Chemical structures of cyclic ADP ribose (cADPR) isomers and the molecular basis of their production and signaling	[ "Molecular dynamics of spike variants in the locked conformation: RBD interfaces, fatty acid binding and furin cleavage sites.", "High-throughput discovery of TRAF6-interacting peptides identifies determinants of positive and negative design and shows known and candidate human interaction partner motifs are not o...	[ "CK2 alpha prime and alpha-synuclein pathogenic functional interaction mediates synaptic dysregulation in Huntington's disease", "AutoCoEv -- a high-throughput in silico pipeline for predicting inter-protein co-evolution", "Evolution of Enterococcus faecium to A Combination of Daptomycin and Fosfomycin Reveals ...	1
Pairing to the microRNA 3' region occurs through two alternative binding modes, with affinity shaped by nucleotide identity as well as pairing position	[ "Structure and function of the chromatin remodeler SMARCAD1 with its nucleosome substrate", "Computational and biochemical analysis of type IV Pilus dynamics and stability", "Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants", "An automated workflow for label-free and multipl...	[ "Facultative release from developmental constraints through polyphenism promotes adaptively flexible maturation", "Ineffectual AEC1 differentiation from KRT8hi transitional state without fibrosis is associated with fatal COVID-19 ARDS", "Functional profiling of long intergenic non-coding RNAs in fission yeast",...	11
Better together - Relative retention time plus spectral matching improves automated glycan characterization using PGC-nLC-IT-ESI-MS/MS	[ "GRAMD1C promotes autophagy initiation and mitochondrial bioenergetics through regulation of ER-mitochondria cholesterol transport", "Slightly different metabolomic profiles are associated with high or low weights duck foie gras", "Evaluation of freshness and physicochemical characteristics of blankets of pirar...	[ "Revealing the relevant spatiotemporal scale underlying whole-brain dynamics", "Sex differences in tissue gene regulation -- contributions of three classes of sex-biasing factors", "Updating the steady state model of C4 photosynthesis", "A novel method to identify cell-type specific regulatory variants and th...	3
Evaluation and Optimization of High-Field Asymmetric Waveform Ion Mobility Spectrometry for Multiplexed Quantitative Site-specific N-glycoproteomics	[ "Cation and anion channelrhodopsins: Sequence motifs and taxonomic distribution", "Avidity observed between a bivalent inhibitor and an enzyme monomer with a single active site", "Inhibition of Tau seeding by targeting Tau nucleation core within neurons with a single domain antibody fragment", "Class I Histon...	[ "Rating enrichment items by group-housed laboratory mice in multiple binary choice tests using an RFID-based tracking system", "Harbingers of Aggressive Prostate Cancer: Precision Oncology Case Studies", "Phase separation of hnRNP A1 upon specific RNA-binding observed by magnetic resonance", "Nano Pom-poms Pr...	3
Improving AlphaFold modeling using implicit information from experimental density maps	[ "Improved AlphaFold modeling with implicit experimental information", "Structure of the human inner kinetochore bound to a centromeric CENP-A nucleosome", "Structural and functional analysis of the human Cone-rod homeobox transcription factor", "Purification of synchronized E. coli transcription elongation co...	[ "Discovery of a small molecule that selectively destabilizes Cryptochrome 1 and enhances life span in p53 knockout mice", "Early zygotic gene product Dunk interacts with anillin to regulate Myosin II during Drosophila cleavage", "BubR1 recruitment to the kinetochore via Bub1 enhances Spindle Assembly Checkpoint...	5
Murine norovirus capsid plasticity - Glycochenodeoxycholic acid stabilizes P domain dimers and triggers escape from antibody recognition	[ "Destabilization of β-cell FIT2 by saturated fatty acids contribute to ER stress and diabetes", "Kinetic pathway of ATP-induced DNA interactions of ParA2, a protein essential for segregation of Vibrio cholerae chromosome 2", "Lantern shark Etmopterus use coelenterazine as substrate for their luciferin-luciferas...	[ "Focal DNA hypo-methylation in cancer is mediated by transcription factors binding", "A small fraction of progenitors differentiate into mature adipocytes due to constraints on the cell structure change", "Plant-derived benzoxazinoids act as antibiotics and shape bacterial communities", "Adaptation of the gut...	7
Protein Refolding Guided by High-Throughput Differential Scanning Fluorimetry: a case study of an HtrA-Family Bacterial Protease	[ "RTEL1 and MCM10 overcome topological stress during vertebrate replication termination", "Structures of the Type IX Secretion/gliding motility motor from across the phylum Bacteroidetes", "A Chemical Mutagenesis Approach to Insert Post-Translational Modifications in Aggregation-Prone Proteins", "Where Honey B...	[ "Computational design of nanoscale rotational mechanics in de novo protein assemblies", "A Cell Culture Model of BK Polyomavirus Persistence, Genome Recombination, and Reactivation", "PhyloCSF++: A fast and user-friendly implementation of PhyloCSF with annotation tools", "debar, a sequence-by-sequence denoise...	3
Steps to (s)-stereoisomers: Rationalization of a standard Short-chain dehydrogenase for the reduction of multiple pharmaceutical ketone intermediates	[ "Flexibility of Short-chain dehydrogenase is interconnected to its promiscuity for the reduction of multiple ketone intermediates", "A PKA Inhibitor Motif within Smoothened Controls Hedgehog Signal Transduction", "Protease Resistance of ex vivo Amyloid Fibrils implies the proteolytic Selection of disease-associ...	[ "PICH, an ATP-dependent chromatin remodeling protein, transcriptionally co-regulates oxidative stress response.", "Cysteine Mutants of the Major Facilitator Superfamily-Type Transporter CcoA Provide insight into Copper Import", "Stimulating the sir2-pgc-1α axis rescues exercise capacity and mitochondrial respir...	1
Oxidation-reduction and photophysical properties of isomeric forms of Safranin	[ "Towards a New Model for the TREX1 Exonuclease", "A new paradigm of multiheme cytochrome evolution by grafting and pruning protein modules", "The structure of Vibrio cholerae FeoC reveals conservation of the helix-turn-helix motif but not the cluster-binding domain", "Natural Variation Meets Synthetic Biology...	[ "Genome annotation of Caenorhabditis briggsae by TEC-RED identifies new exons, paralogs, and conserved and novel operons", "Cannabidiol as an add-on therapy to overcome the slow-onset and, possibly, resistance to antidepressant treatment: involvement of NAPE-PLD in the medial prefrontal cortex", "Neural network...	1
Structure of the vasopressin hormone-V2 receptor-β-arrestin1 ternary complex	[ "Mechanochemical tuning of a kinesin motor essential for malaria parasite transmission", "Generation and validation of an anti-human PANK3 mouse monoclonal antibody", "High-Resolution Tandem Mass Spectrometry Indicates Rubisco Activase is Associated with PS I-LHC I-LHC II Membranes", "Substrate Binding and In...	[ "Dengue and Zika virus capsid proteins bind to membranes and self-assemble into liquid droplets with nucleic acids", "Wolbachia endosymbionts in two Anopheles species indicates independent acquisitions and lack of prophage elements", "Anti-tumor efficacy of an MMAE conjugated antibody targeting cell surface TAC...	1
Understanding p300-transcription factor interactions using sequence variation and hybridization	[ "Protein Posttranslational Signatures Identified in COVID-19 Patient Plasma", "The aphid BCR4 structure and activity uncover a new defensin peptide superfamily", "Structure of EPCR in a non-canonical conformation", "Amyloidogenesis of SARS-CoV-2 Spike Protein", "Visualizing translation dynamics at atomic de...	[ "The HH-GLI2-CKS1B network regulates the proliferation-to-maturation transition of human cardiomyocytes", "Local assembly of long reads enables phylogenomics of transposable elements in a polyploid cell line", "Conserved Neutralizing Epitopes on the N-Terminal Domain of Variant SARS-CoV-2 Spike Proteins", "Ge...	9
A molecular network of conserved factors keeps ribosomes dormant in the egg	[ "Structure of mammalian V-ATPase with the TLDc domain protein mEAK7 bound", "CryoEM of endogenous mammalian V-ATPase interacting with the TLDc protein mEAK-7", "Metabolic heritage mapping: heterogenous pools of cytoplasmic nucleotide sugars are selectively utilized by various glycosyltransferases", "Disease-l...	[ "Removing Thermostat Distortions of Protein Dynamics in Constant-Temperature Molecular Dynamics Simulations", "USP28 enables oncogenic transformation of respiratory cells and its inhibition potentiates molecular therapy targeting mutant EGFR, BRAF and PI3K.", "Bruton's Tyrosine Kinase Supports Gut Mucosal Immun...	11
Genetic Encoding of A Nonhydrolyzable Phosphotyrosine Analog in Mammalian Cells	[ "Optogenetic operated probiotics to regulate host metabolism by mimicking enteroendocrine", "Euler method can outperform more complex ODE solvers in the numerical implementation of the Izhikevich artificial Spiking Neuron Model given the allocated FLOPS", "Therapeutic downregulation of neuronal PAS domain 2 (Np...	[ "Characterization of a novel mesophilic CTP-dependent riboflavin kinase and rational engineering to create its thermostable homologs", "Ineffectual AEC1 differentiation from KRT8hi transitional state without fibrosis is associated with fatal COVID-19 ARDS", "Integration of spatial transcriptomic and single cell...	4
D2BGAN: Dual Discriminator Bayesian Generative Adversarial Network for Deformable MR-Ultrasound Registration Applied to Brain Shift compensation	[ "Augmenting Transcranial Magnetic Stimulation Coil with Magnetic Material: An Optimization Approach", "Self-rectifying magnetoelectric metamaterials enable precisely timed remote neural stimulation and restoration of sensory motor functions", "Smart sealants for prevention and monitoring of gastrointestinal ana...	[ "CometChip Enables Parallel Analysis of Multiple DNA Repair Activities", "Extracellular matrix guidance determines proteolytic and non-proteolytic cancer cell patterning", "A General Model for Scaling Basal Metabolic Rate, Glomerular Filtration Rate and Drug Clearance from Birth to Adulthood", "SeqWho: Reliab...	5
Encapsulated allografts preclude host sensitization and promote ovarian endocrine function in ovariectomized young rhesus monkeys and sensitized mice	[ "A PMMA bone cement composite that functions as a drug-refillable depot for localized, multi-window chemotherapeutic treatment of bone cancer", "Temperature-Inducible Precision Guided Sterile Insect Technique", "AN INTEGRATIVE BIOLOGY APPROACH TO QUANTIFY THE BIODISTRIBUTION OF AZIDOHOMOALANINE IN VIVO", "Emb...	[ "Lentiviral vector optimization enhances the expression and cytotoxicity of chimeric antigen receptors", "A General Biphasic-Bodyweight Model for Scaling Basal Metabolic Rate, Glomerular Filtration Rate and Drug Clearance from Birth to Adulthood", "Extensive variation in the mouse intelectin gene family: recent...	7
Directing multicellular organization by varying the aspect ratio of soft hydrogel microwells	[ "Self-healing of hyaluronic acid to improve in vivo retention and function", "Blood flow modeling reveals improved collateral artery performance during mammalian heart regeneration", "Volumetric ultrasound localization microscopy of the whole brain microvasculature", "PREDICTING SPEECH INTELLIGIBILITY FROM A ...	[ "Highly selective Cooperative Primers for multiplex detection of rare mutations", "BioDynaMo: a general platform for scalable agent-based simulation", "Learning to live with Dale's principle: ANNs with separate excitatory and inhibitory units", "N-VEGF, the forgotten isoform of VEGF-A, activate cellular stres...	10
Epidural Electrical Stimulation of the Cervical Dorsal Roots Restores Voluntary Upper Limb Control In Paralyzed Monkeys	[ "Characterization and significance of extracellular polymeric substances, reactive oxygen species, and extracellular electron transfer in methanogenic biocathode", "Cerebral biodistribution and real-time particle tracking in vivo of ultrabright fluorescent PLGA nano-carriers", "Dynamic tracing using ultra-brigh...	[ "mRNA-1273 efficacy in a severe COVID-19 model: attenuated activation of pulmonary immune cells after challenge", "Detection of hematopoietic stem cell transcriptome in human fetal kidneys and kidney organoids derived from human induced pluripotent stem cells (iPSC)", "Anti-thrombotic treatment enhances antibio...	15
A Simple and Reproducible In-Vivo Rabbit Phonation Model for Glottic Insufficiency	[ "Biomechanical dependence of SARS-CoV-2 infections", "Ionic remodelling following myocardial infarction explains phenotypic variability in ECG and arrhythmic substrate but not in ejection fraction", "Depletion of Sun1/2 Induces Heterochromatin Accrual in Mesenchymal Stem Cells during Adipogenesis", "Design of...	[ "Kismet/CHD7/CHD8 affects gut biomechanics, the gut microbiome, and gut-brain axis in Drosophila melanogaster", "Voluntary motor commands are preferentially released during restricted sensorimotor beta rhythm phases", "A CAR RNA FISH assay to study functional and spatial heterogeneity of chimeric antigen recept...	5
Effects of early geometric confinement on the transcriptomic profile of human cerebral organoids	[ "Deep Learning-Based Approaches for Decoding Motor Intent from Peripheral Nerve Signals", "Establishment of a human three-dimensional chip-based chondro-synovial co-culture joint model for reciprocal cross-talk studies in arthritis research", "Selective stimulation of the ferret abdominal vagus nerve with multi...	[ "Cryo-EM structure of lipid embedded human ABCA7 at 3.6 &Aring resolution", "Overcoming leak sensitivity in CRISPRi circuits using antisense RNA sequestration and regulatory feedback", "Translation of MT-ATP6 pathogenic variants reveals distinct regulatory consequencesfrom the co-translational quality control o...	17
Well-Lit: A programmable and customizable assistant for manual multi-well plate pipetting	[ "Unexpected arabinosylation after humanization of plant protein N-glycosylation", "Optimal operation of parallel mini-bioreactors in bioprocess development using multi-stage MPC", "Arsenal of Nanobodies for Broad-Spectrum Countermeasures against Current and Future SARS-CoV-2 Variants of Concerns", "Delivery o...	[ "Optimization of conditions for conjugation of outer membrane vesicles of Salmonella Typhimurium with oral delivery systems using response surface method", "Quantitative multidimensional phenotypes improve genetic analysis of laterality traits", "Structures of the Type IX Secretion/gliding motility motor from a...	2
Biomechanical evaluation of a novel orthogonal angle-stable interlocking nail in a canine femur model	[ "Discover Your Potential: The Influence of Kinematics on a Muscle's Ability to Contribute to the Sit-to-Stand Transfer", "Segmentation of the Urothelium in Optical Coherence Tomography Images with Dynamic Contrast", "Bioptim, a Python framework for Musculoskeletal Optimal Control in Biomechanics", "Quantitati...	[ "Insulin exposed endometrial epithelial cells cultured in a microfluidic device alters transcripts involved in translation that may contribute to reduced implantation capacity of the endometrium.", "Systemic antibody-oligonucleotide delivery to the central nervous system ameliorates mouse models of spinal muscula...	0
Optical Cellular Micromotion: A New Paradigm to Measure Tumour Cells Invasion in 3D Tumour Environments	[ "The Macromolecular MR Spectrum in Healthy Aging", "SNR-efficient distortion-free diffusion relaxometry imaging using ACcelerated Echo-train shifted EPTI (ACE-EPTI)", "Context-Dependent Flux Coupling via Conserved Small-Molecule Regulatory Structures", "Three-dimensional microenvironment regulates gene expres...	[ "Quantitative modeling of regular retinal microglia distribution", "Predicting Parallelism and Quantifying Divergence in Experimental Evolution", "Inhibition of infection-induced vascular permeability modulates host leukocyte recruitment to Mycobacterium marinum granulomas in zebrafish", "Orientation dependen...	4
A Hydrogel Microneedle-assisted Assay Integrating Aptamer Probes and Fluorescence Detection for Reagentless Biomarker Quantification	[ "Open-Source Low-Cost Cardiac Optical Mapping System", "Remarkable Adsorption Performance of Rutile TiO2 (110) Nanosheet for DNA Nucleobases: A First-Principles Study", "Multiplexed ultrasound imaging using clustered gas vesicles and spectral imaging", "Mapping enzyme catalysis with metabolomic biosensing", ...	[ "PhycoMine: A Microalgae Data Warehouse", "Characterization of dengue virus 3UTR RNA binding proteins in mosquitoes reveals that AeStaufen reduces subgenomic flaviviral RNA in saliva", "Validation of cervical lesion proportion measure using a gridded imaging techique to assess cervical pathology in women with g...	3
Quantitative single-cell transcriptome-based ranking of engineered AAVs in human retinal explants	[ "Biomimetic Vasculatures by 3D-Printed Porous Molds", "Tuning epithelial cell-cell adhesion and collective dynamics with functional DNA-E-cadherin hybrid linkers", "Enhanced keratin extraction from wool waste using a deep eutectic solvent", "Predicting Knee Adduction Moment Response to Gait Retraining with Mi...	[ "Biosynthesis of linear protein nanoarrays using the flagellar axoneme", "Cell cycle-independent integration of stress signals promotes Non-G1/G0 cellular quiescence", "A Genetically Encoded BRET-based SARS-CoV-2 Mpro Protease Activity Sensor", "Profiling the Human Phosphoproteome to Estimate the True Extent ...	17
Synthetic Biology Tool Development Advances Predictable Gene Expression in the Metabolically Versatile Soil Bacterium Rhodopseudomonas palustris	[ "Biofabrication of development-inspired scaffolds for regeneration of the annulus fibrosus macro- and microarchitecture", "Laser-driven Wireless Deep Brain Stimulation using Temporal Interference and Organic Electrolytic Photocapacitors", "Machine learning-based library design improves packaging and diversity o...	[ "Reconstruction of a generic genome-scale metabolic network for chicken: investigating network connectivity and finding potential biomarkers", "Natural variation identifies new effectors of water use efficiency in Arabidopsis.", "hibayes: An R Package to Fit Individual-Level, Summary-Level and Single-Step Bayes...	2
Drug screening at single-organoid resolution via bioprinting and interferometry	[ "Direct carbon capture for production of high-performance biodegradable plastic by cyanobacterial cell factory", "Modular, synthetic chromosomes as new tools for large scale engineering of metabolism", "Gigapixel behavioral and neural activity imaging with a novel multi-camera array microscope", "SARS-CoV-2 c...	[ "Golden Gate Assembly of Aerobic and Anaerobic Microbial Bioreporters", "Feasibility of Administering Human Pancreatic Cancer Chemotherapy in Spontaneous Pancreatic Cancer Mouse Model", "SETDB1 Fuels the Lung Cancer Phenotype by Modulating Epigenome, 3D Genome Organization and Chromatin Mechanical Properties", ...	17
In vivo Biomechanical Assessment of Iridial Deformations and Muscle Contractions in Human Eyes	[ "M-TUBE: a fabrication-free microfluidic device for large-volume bacterial electroporation requiring minimal assembly", "Automated atlas-based multi-label fetal cardiac vesselsegmentation in Congenital Heart Disease", "An efficient simplified method for the generation of corneal epithelial cells from human plur...	[ "Oligopaint DNA FISH as a tool for investigating meiotic chromosome dynamics in the silkworm, Bombyx mori", "Nicotine measurement on Cambridge Filter PADs: an interlaboratory comparison to evaluate exposure by different electronic devices and traditional cigarette", "Quantifying Central Metabolic Fluxes in Huma...	15
Doppler Slicing for Ultrasound Super-Resolution Without Contrast Agents	[ "Assessment of temporal complexity in functional MRI between rest and task conditions", "A Comparison Study between Autism Spectrum Disorder and Typically Control in Graph Frequency Bands Using Graph and Triadic Interaction Metrics", "Transcriptomic Analysis of 3D Vasculature-On-A-Chip Reveals Paracrine Factors...	[ "Fully Human Antibody Immunoglobulin from Transchromosomic Bovines is Potent Against SARS-CoV-2 Variant Pseudoviruses", "Identification of electroporation sites in the complex lipid organization of the plasma membrane", "Double mutant of chymotrypsin inhibitor 2 stabilized through increased conformational entro...	3
Expanding N-Glycopeptide Identifications by Fragmentation Prediction and Glycome Network Smoothing	[ "Jumper Enables Discontinuous Transcript Assembly in Coronaviruses", "Functional Near Infrared Spectroscopy (fNIRS) based Odor Detection and Classification using Functional Data Analysis", "Spatially Interacting Phosphorylation Sites and Mutations in Cancer", "Expanding the MECP2 network using comparative gen...	[ "Non-linearity matters: a deep learning solution to the generalization of hidden brain patterns across population cohorts", "CLASP2 stabilizes GDP-associated terminal tubulins to prevent microtubule catastrophe", "THINGSvision: a Python toolbox for streamlining the extraction of activations from deep neural net...	3
PMCE: efficient inference of expressive models of cancer evolution with high prognostic power	[ "A max-margin model for predicting residue-base contacts in protein-RNA interactions", "Fast gene set enrichment analysis", "Estimating the timing of multiple admixture events using 3-locus Linkage Disequilibrium", "Sustained software development, not number of citations or journal choice, is indicative of ac...	[ "Induction of pancreatic neoplasia in the KRAS/TP53 Oncopig: preliminary report", "Preclinical evaluation of CDK4 phosphorylation predicts high sensitivity of malignant pleural mesotheliomas to CDK4/6 inhibition", "Population genetic bottleneck has only marginal effects on fitness evolution and its repeatabilit...	5
CIAlign - A highly customisable command line tool to clean, interpret and visualise multiple sequence alignments.	[ "leADS: improved metabolic pathway inference based on active dataset subsampling", "Privacy preserving storage of sequenced genomic data", "Geographic heterogeneity impacts drug resistance predictions in Mycobacterium tuberculosis", "RatsPub: a webservice aided by deep learning to mine PubMed for addiction-re...	[ "Ubiquitin Ligase SmDDA1b of Eggplant (Solanum melongena) Enhances Bacterial Wilt Resistance via SmNAC Degradation", "Robust data storage in DNA by de Bruijn graph-based decoding", "A thermodynamic model for interpreting tryptophan excitation-energy-dependent fluorescence spectra provides insight into protein c...	2
APPTEST is an innovative new method for the automatic prediction of peptide tertiary structures	[ "The carbon footprint of bioinformatics", "HERMES: a molecular formula-oriented method to target the metabolome", "Make Interactive Complex Heatmaps in R", "COVIDrugNet: a network-based web tool to investigate the drugs currently in clinical trial to contrast COVID-19", "RS-FISH: Precise, interactive and sc...	[ "Rapid generation of pigment free, immobile zebrafish embryos and larvae in any genetic background using CRISPR-Cas9 dgRNPs", "Identification of Cell-Free DNA Methylation Patterns Unique to the Human Left Ventricle as a Potential Indicator of Acute Cellular Rejection", "Simple, sensitive and cost-effective dete...	2
Model design for non-parametric phylodynamic inference and applications to pathogen surveillance	[ "Learning to see colours: generating biologically relevant fluorescent labels from bright-field images", "LINE-1 Retrotransposon expression in cancerous, epithelial and neuronal cells revealed by 5'-single cell RNA-Seq", "Scalpel: Information-based Dimensionality Reduction for Rare Cell Type Discovery", "Disc...	[ "SwabExpress: An end-to-end protocol for extraction-free COVID-19 testing", "Metaplasia of respiratory and digestive tissues in the Eastern oyster Crassostrea virginica associated with the Deepwater Horizon oil spill", "Diel transcriptional pattern contributes to functional and taxonomic diversity in supraglaci...	2
Bacteria are everywhere, even in your COI marker gene data!	[ "Attention-based convolutional neural networks for protein-protein interaction site prediction", "Protein-Protein Interaction Site Prediction Based on Attention Mechanism and Convolutional Neural Networks", "Assessing Reproducibility of High-throughput Experiments in the Case of Missing Data.", "Novel Roles o...	[ "A fluorescence-based genetic screen reveals diverse mechanisms silencing small RNA signaling in E. coli", "Quantitative Analysis of Transcriptome Dynamics Provides Novel Insights into Developmental State Transitions", "Towards Practical and Robust DNA-based Data Archiving Using \"Yin-Yang Codec\" System", "C...	2
MAAPER: model-based analysis of alternative polyadenylation using 3' end-linked reads	[ "A highly accurate model for screening prostate cancer using propensity index panel of ten genes", "The Central Importance of Hub Proteins in a Disease-Gene Network Model: A New Paradigm of Chronic Myeloid Leukemia Disease Study", "Molecular insights into the μ-opioid receptorselective signaling", "Identifyin...	[ "Predicting T cell receptor antigen specificity from structural features derived from homology models of receptor-peptide-major histocompatibility complexes.", "Accounting for errors in data improves timing in single-cell cancer evolution", "Partial resistance to HDAC inhibitors in FAPs of dystrophic muscles at...	1
A general framework to learn tertiary structure for protein sequence characterization	[ "A Comprehensive Phylogenetic and Bioinformatics Survey of Lectins in the Fungal kingdom", "Trapped Ion Mobility Spectrometry Reduces Spectral Complexity in Mass Spectrometry Based Workflow", "KBoost: a new method to infer gene regulatory networks from gene expression data", "Exploiting marker genes for robus...	[ "Bridge Category Models: Development of Bayesian Modelling Procedures to Account for Bridge Ordinal Ratings for Disease Staging", "Assessing computational variant effect predictors with a large prospective cohort", "Generation of tumors in wing imaginal discs of Drosophila melanogaster third instar larvae to st...	3
CytoSet: Predicting clinical outcomes via set-modeling of cytometry data	[ "A Platform for Oncogenomic Reporting and Interpretation", "Interpretable, scalable, and transferrable functional projection of large-scale transcriptome data using constrained matrix decomposition", "Limitations of the ABEGO representation: ambiguity between αα-corner and αα-hairpin", "T1TAdb: the database o...	[ "SARS-CoV-2 comprehensive receptor profiling: mechanistic insight to drive new therapeutic strategies", "The immunosuppression of macrophages underlies the cardioprotective effects of catestatin (CST)", "The distinct effects of MEK and GSK3 inhibition upon the methylome and transcriptome of mouse embryonic stem...	5
Open access in silico tools to predict the ADMET profiling and PASS (Prediction of Activity Spectra for Substances of Bioactive compounds of Garlic (Allium sativum L.)	[ "PLIGHT: A tool to assess privacy risk by inferring identifying characteristics from sparse, noisy genotypes", "Docking Molecular analysis of potential Aldosterone antagonists", "Application of personalized differential expression analysis in human cancer proteome", "CoLoRd: Compressing long reads", "Prior ...	[ "Bioequivalence Assessment of High-Capacity Polymeric Micelle Nanoformulation of Paclitaxel and Abraxane(R) in Rodent and Non-Human Primate Models Using a Stable Isotope Tracer Assay", "MAESTRO affords 'breadth and depth' for mutation testing", "Bruton's Tyrosine Kinase Supports Gut Mucosal Immunity and Commens...	1
PyDamage: automated ancient damage identification and estimation for contigs in ancient DNA de novo assembly	[ "Deep learning-based chest X-ray age serves as a novel biomarker for cardiovascular aging", "Autism_genepheno: Text mining of gene-phenotypeassociations reveals new phenotypic profiles ofautism-associated genes", "minicore: Fast scRNA-seq clustering with various distance measures", "Novel cancer subtyping met...	[ "Antibacterial potency of Type VI amidase effector toxins is dependent on substrate topology and cellular context", "Self-healing neural codes: Hebbian and homeostatic mechanisms can track evolving neural representations", "Using herbarium samples for NGS methods - a methodological comparison", "Multi-compart...	11
Retro Drug Design: From Target Properties to Molecular Structures	[ "Bioinformatics analyses of significant genes, related pathways and candidate prognostic biomarkers in Alzheimer disease", "massNet: integrated processing and classification of spatially resolved mass spectrometry data using deep learning for rapid tumor delineation", "Squeegee: de-novo identification of reagen...	[ "Considerations for MESF-bead based assignment of absolute fluorescence values to nanoparticles and extracellular vesicles by flow cytometry", "Dynamics and self-assembly of the SARS-CoV-2 spike transmembrane domain", "The physics of liquid-to-solid transitions in multi-domain protein condensates", "Noradrena...	1
Machine Learning to Summarize and Provide Context for Sleep and Eating Schedules.	[ "HOPMA: Boosting protein functional dynamics with colored contact maps", "Algorithm optimization for weighted gene co-expression network analysis: accelerating the calculation of Topology Overlap Matrices with OpenMP and SQLite", "Identification of Common Molecular Signatures Shared between Alzheimer's and Park...	[ "A long non-coding RNA in the let-7 complex acting as a potent and specific death effector of cancer cells", "Intergenerational hormesis is regulated by heritable 18S rRNA methylation", "Comparative analysis of high- and low-level deep learning approaches in microsatellite instability prediction", "In-depth a...	5
Molecular mimicry between Spike and human thrombopoietin may induce thrombocytopenia in COVID-19	[ "Spike mimicry of thrombopoietin may induce thrombocytopenia in COVID-19", "Potential autoimmunity resulting from molecular mimicry between SARS-CoV-2 Spike and human proteins", "Investigate Inhibitory Effects of Ginger polyphenols compare to Simvastatin towards HMG-CoA reductase: An Integrated Molecular Dockin...	[ "Impact of IgG isotype on the induction of antibody-dependent cellular phagocytosis of HIV by human milk leukocytes", "Set1-mediated histone H3K4 methylation is required for azole induction of the ergosterol biosynthesis genes and antifungal drug resistance in Candida glabrata.", "Modulating CRISPR-Cas genome e...	7
Sparse Representation Learning Derives Biological Features with Explicit Gene Weights from the Allen Mouse Brain Atlas	[ "A penalized linear mixed model with generalized method of moments for complex phenotype prediction", "phylogatR: Phylogeographic data aggregation and repurposing", "De novo Prediction of Cell-Drug Sensitivities Using Deep Learning-based Graph Regularized Matrix Factorization", "Ubiquitin Proteasome Pathway a...	[ "Deep RNN with Pseudo Loss Objective for Forecasting Stop-over Decisions of Wild Migratory Birds.", "A multiple comorbidities mouse model to assess atherosclerosis progression following lung infection in ApoE deficient mice", "Assessing the response to genomic selection by simulation", "Quantitative imaging r...	5
High-resolution reconstruction and deconvolution of array detector images	[ "A comparison of high resolution image reconstruction methods from confocal array detector with a new deconvolution algorithm", "IntroSpect: motif-guided immunopeptidome database building tool to improve the sensitivity of HLA binding peptide identification", "Targeted in silico characterization of fusion trans...	[ "Fenbendazole resistance in Heterakis gallinarum, the vector of Histomonas meleagridis, the causative agent of Blackhead Disease in poultry.", "The Population Structure and Selection Signal Analysis of Shenxian Pigs based on Genome Resequencing Technology", "Rhythmic coordination of hippocampal-prefrontal ensem...	3
Active forces in confluent cell monolayers	[ "Lipids in the Piezo1 channel pore: gating mechanism, or simulation artifact?", "Structural insights into the mechanism of nucleotide regulation of pancreatic KATP channel", "A stochastic mathematical model of 4D tumour spheroids with real-time fluorescent cell cycle labelling", "Anticipating future SARS-CoV-...	[ "Single cell chronoatlas of regenerating mouse livers reveals early Kupffer cell proliferation", "Robust temporal map of human in vitro myelopoiesis using single-cell genomics", "VGLL2-NCOA2 leverages developmental programs for pediatric sarcomagenesis", "Unlocking the strength of inducible promoters in gram-...	10
Mapping the sequence specificity of heterotypic amyloid interactions enables the identification of aggregation modifiers	[ "Single snapshot quantitative phase imaging with polarization differential interference contrast", "A tug of war between filament treadmilling and myosin induced contractility generates actin cortex", "Structural insights into the modes of relaxin-binding and tethered-agonist activation of RXFP1 and RXFP2", "...	[ "Hybridization chain reaction enables a unified approach to multiplexed, quantitative, high-resolution immunohistochemistry and in situ hybridization", "Single-dose AAV-based vaccine induces a high level of neutralizing antibodies against SARS-CoV-2 in rhesus macaques", "Modified E. coli strains enhance baculov...	3
Lateral electric field inhibits gel-to-fluid transition in lipid bilayers	[ "Proton egress pathway during the S1 to S2 transition of the Oxygen Evolving Complex ofPhotosystem II", "Tools enabling flexible approaches to high-resolution subtomogram averaging", "Membrane barrels are taller, fatter, inside-out soluble barrels", "Water as a reactant in the first step of triosephosphate is...	[ "Genome editing in the unicellular holozoan Capsaspora owczarzaki suggests a premetazoan role for the Hippo pathway in multicellular morphogenesis", "New targets for drug design: Importance of nsp14/nsp10 complex formation for the 3'-5' exoribonucleolytic activity on SARS-CoV-2", "P38 kinases mediate NLRP1 infl...	10
A rhythmically pulsing leaf-spring nanoengine that drives a passive follower	[ "A multi-state dynamical process underpins mechano-adaptation in the bacterial flagellar motor", "A multi-state dynamic process confers mechano-adaptation to the bacterial flagellar motor", "A Lattice Model on the Rate of DNA Hybridization", "In situ distance measurements in a membrane transporter using malei...	[ "Embryo development in Carica papaya Linn", "A landscape model for cell fate decisions during mesoendoderm differentiation in C. elegans based on Wnt dynamics", "A novel adhesive complex at the base of intestinal microvilli", "A chromosome-scale genome assembly of a Bacillus thuringiensis Cry1Ac insecticidal ...	13
Controlled Fluorescent Labelling of Metal Oxide Nanoparticles for Artefact-free Live Cell Microscopy	[ "Negative regulation of a ribonucleoprotein condensate driven by dilute phase oligomerization", "Dilute phase oligomerization can oppose phase separation and modulate material properties of a ribonucleoprotein condensate", "Molecular architecture of black widow spider neurotoxins", "Nascent clathrin lattices ...	[ "Single-cell Multiomics Reveals Clonal T-cell Expansions and Exhaustion in Blastic Plasmacytoid Dendritic Cell Neoplasm", "Hedgehog pathway inhibitors significantly reduce the formation of heterotopic ossification in a direct trauma/burn mouse model", "Ultrahigh-throughput directed evolution of a metal-free α/β...	3
Crystallographic molecular replacement using an in silico-generated search model of SARS-CoV-2 ORF8	[ "Magnetic tweezers meets AFM: ultra-stable protein dynamics across the force spectrum", "Mechanics of the cellular microenvironment as perceived by cells in vivo", "A novel universal algorithm for filament network tracing and cytoskeleton analysis", "In-Vitro Fluorescence Microscopy Studies Show Retention of ...	[ "Determination of protein stoichiometries via dual-color colocalization with single molecule localization microscopy", "One Health or Three? Transmission modelling of Klebsiella isolates reveals ecological barriers to transmission between humans, animals and the environment", "Genes for tRNA recycling are upreg...	7
Single-molecule FRET dynamics of molecular motors in an ABEL Trap	[ "Virus-host interactions shape viral dispersal giving rise to distinct classes of travelling waves in spatial expansions", "Topological Tuning of DNA Mobility in Entangled Solutions of Supercoiled Plasmids", "TopoStats - a program for automated tracing of biomolecules from AFM images", "Nanoscale membrane cur...	[ "Covalent inhibition of endoplasmic reticulum chaperone GRP78 disconnects the transduction of ER stress signals to inflammation and lipid accumulation in diet-induced obese mice", "Discovery of archaeal Fusexins homologous to eukaryotic HAP2/GCS1 gamete fusion proteins", "ETAS(R)50 Attenuates SARS-CoV-2 Spike P...	3
A thermodynamic model for interpreting tryptophan excitation-energy-dependent fluorescence spectra provides insight into protein conformational sampling and stability	[ "Investigation of gating in outer membrane porins provides new perspectives on antibiotic resistance mechanisms", "Nascent ribosomal RNA acts as surfactant that suppresses growth of fibrillar centers in nucleolus", "Proton Coupling and the Multiscale Kinetic Mechanism of a Peptide Transporter", "Role of Solve...	[ "The BAF A12T mutation associated with premature aging impedes lamin A/C recruitment to sites of nuclear rupture, contributing to nuclear envelope fragility.", "GC-biased gene conversion in X-Chromosome palindromes conserved in human, chimpanzee, and rhesus macaque", "Simple, sensitive and cost-effective detect...	3
Microwell array-based opto-electrochemical detections revealing co-adaptation of rheological properties and oxygen metabolism in budding yeast	[ "Structural and mechanistic insight into spectral tuning in flavin-binding fluorescent proteins", "The role of water mobility in protein misfolding", "Occurrences of protonated base triples in RNA are determined by their cooperative binding energies and specific functional requirements", "Structural basis for...	[ "The molecular interplay of the establishment of an infection - gene expression of Diaphorina citri gut and Candidatus Liberibacter asiaticus", "MECOM permits pancreatic acinar cell dedifferentiation avoiding cell death under stress conditions", "Distributed Brain Co-Processor for Neurophysiologic Tracking and ...	10
Stress fibers orient traction forces on micropatterns: A hybrid cellular Potts model study	[ "ISM-FLUX: single-step MINFLUX with an array detector", "Estimation of microtubule-generated forces using a DNA origami nanospring", "3D printed SAXS chamber for controlled in-situ dialysis and optical characterization", "Nucleosome sliding by the Chd1 chromatin remodeler relies on theintegrity of the DNA dup...	[ "Unraveling the roles of Mast4 in amelogenesis via regulating DLX3 and stem cell maintenance of mouse incisors", "Identification of a novel modulator of the actin cytoskeleton, mitochondria, nutrient metabolism and lifespan in yeast", "TCR signaling promotes the assembly of RanBP2/RanGAP1-SUMO1/Ubc9 NPC subcomp...	15
Enhancing the localization precision of single molecule localization microscopy by analyzing Brownian motion of individual fluorescent probe	[ "Improving localization precision via restricting biomolecule confined stochastic motion in SMLM", "Speed limits of protein assembly with reversible membrane localization", "How certain are we? Development of an ensemble based framework for assessing astronaut cancer risks from space radiation", "PolyQ expans...	[ "A quantitative gibberellin signalling biosensor reveals a role for gibberellins in internode specification at the shoot apical meristem", "Systematic Evaluation of Different R-loop Mapping Methods: Achieving Consensus, Resolving Discrepancies and Uncovering Distinct Types of RNA:DNA Hybrids", "Core and rod str...	3
Cortical Tension Initiates the Positive Feedback Loop Between E-cadherin and F-actin	[ "Effects of substrate stiffness and actin velocity on fibronectin fibril morphometry and mechanics", "Reconstitution of ultrawide DNA origami pores in liposomes for transmembrane transport of macromolecules", "Nanomechanics of negatively supercoiled diaminopurine-substituted DNA", "Free Energy Landscape of RN...	[ "Behavioural analysis of loss of function zebrafish supports baz1b as master regulator of domestication", "Structural basis of ATP-dependent high-fidelity epigenome maintenance", "Reactive oxygen species signalling is involved in alkamide-induced altered root development.", "Endothelial Pannexin 1-TRPV4 chann...	15
The Third Transmembrane Domain of Synaptophysin Regulates Initial Fusion Pore Dynamics during Ca2+ -Triggered Exocytosis in Chromaffin cells	[ "Soft topographical patterns trigger a stiffness-dependent cellular response to contact guidance", "Reversible adhesion by type IV pili leads to formation of irreversible localized clusters", "Molecular insights into the MCM8/9 helicase complex in DNA unwinding and translocation", "Dynamics of Human Serum Tra...	[ "mGBP2 engages Galectin-9 and Cytoskeleton-associated Protein 4 for immunity against Toxoplasma gondii", "Purine auxotrophic starvation evokes quiescence like phenotype in the budding yeast", "DNA origami patterning of synthetic T cell receptors reveals spatial control of the sensitivity and kinetics of signal ...	15
Cooperativity and folding kinetics in a multi-domain protein with interwoven chain topology	[ "AlphaFold accurately predicts distinct conformations based on oligomeric state of a de novo designed protein", "Chromatin sequesters pioneer transcription factor Sox2 from exerting force on DNA", "Unraveling the Enzymatic Mechanism of the SARS-CoV-2 RNA-Dependent-RNA-Polymerase. An Unusual Active Site Leading ...	[ "Glutathione binding to the plant At Atm3 transporter and implications for the conformational coupling of ABC transporters", "Distinct developmental phenotypes result from mutation of Set8/KMT5A and histone H4 lysine 20 in Drosophila melanogaster", "A mRNA vaccine encoding for a RBD 60-mer nanoparticle elicits ...	3
The Pathogenic R5L Mutation Disrupts Formation of Tau Complexes on the Microtubule by Altering Local N-Terminal Structure	[ "Nanopore microscope identifies RNA isoforms with structural colors", "Identification of electroporation sites in the complex lipid organization of the plasma membrane", "Interactive 3D visualization and post-processing analysis of vertex-based unstructured polyhedral meshes with ParaView", "PySOFI: an open s...	[ "Female gametophyte expressed Arabidopsis thaliana lipid transfer proteins AtLtpI.4 and AtLtpI.8 provide a link between callose homeostasis, pollen tube guidance, and fertilization success", "The RNA helicase DDX6 controls early mouse embryogenesis by repressing aberrant inhibition of BMP signaling through miRNA-...	15
The physics of liquid-to-solid transitions in multi-domain protein condensates	[ "Lattice-based microenvironmental uncertainty driven phenotypic decision-making: a comparison with Notch-Delta-Jagged signaling", "Investigating the structural changes due to adenosine methylation of the Kaposi's sarcoma-associated herpes virus ORF50 transcript", "Mechanics of cell integration in vivo", "2-ph...	[ "Hysteresis in PIF4 and ELF3 dynamics dominates warm daytime memory in Arabidopsis", "Effect of a low concentration in chloride, sodium and potassium on oocyte maturation, oocyte hydration, ovulation and egg quality in rainbow trout.", "CRISPR-Cas-mediated tethering recruits the yeast HMR mating-type locus to t...	10
Combined Inhibition of AKT and KIT Restores Expression of Programmed Cell Death 4 (PDCD4) in Gastrointestinal Stromal Tumor	[ "Visualizing reactive astrogliosis extends survival in glioblastoma patients", "Visualizing cancer-originated acetate uptake through MCT1 in reactive astrocytes demarcates tumor border and extends survival in glioblastoma patients", "Associations between recurrent mutations and blast immunophenotype in acute my...	[ "A FOXN1 mutation competitively displaces wild-type FOXN1 from higher order nuclear condensates to cause immunodeficiency", "Protein lactylation induced by neural excitation", "Natural tolerance to transposition is associated with Myc-regulation and DNA repair", "AIMP1-derived peptide secreted from hair folli...	4
Effects of different environmental intervention durations on the intestinal mucosal barrier and the brain-gut axis in rats with colorectal cancer	[ "-Labeled PARP-1 PET Imaging of PSMA Targeted Alpha Particle Radiotherapy Response", "Comparison of co-immunoprecipitation techniques for effective identification of SNTA1 interacting proteins in breast cancer cells", "Analysis of alternative mRNA splicing in vemuraf-enib-resistant melanoma cells", "Analysis ...	[ "Non-canonical Function of a Hif-1α Splice Variant Contributes to the Sustained Flight of Locusts", "Live visualization of cytosolic and endoplasmic reticulum redox potential in zebrafish embryos reveals region-specific differences", "Ultrastructural analysis of nasopharyngeal epithelial cells from patients wit...	12
Single-nuclei transcriptomes from human adrenal gland reveals distinct cellular identities of low and high-risk neuroblastoma tumors.	[ "Tribbles 2 confers enzalutamide resistance in prostate cancer by promoting lineage plasticity.", "Evaluation of the effect of hydrocortisone in 2D and 3D HEp-2 cell culture", "Dynamic phase separation of the androgen receptor and its coactivators to regulate gene expression.", "Canagliflozin increases adenom...	[ "Predicting trait phenotypes from knowledge of the topology of gene networks", "Youthful and age-related matreotypes predict drugs promoting longevity", "Experimental Guidance for Discovering Genetic Networks through Iterative Hypothesis Reduction on Time Series", "Distinct developmental phenotypes result fro...	17
Condition Medium of Glioblastoma Cell Lines Decreases the Viability of Glioblastoma Cells by Modulating Gene Expression Profile	[ "Disrupting the CmP signaling network unveils novel biomarkers for triple negative breast cancer in Caucasian American women", "Distinct roles of glutamine metabolism in benign and malignant cartilage tumors with IDH mutations", "Elevated METTL9 is associated with peritoneal dissemination in human scirrhous gas...	[ "Weakly deleterious natural genetic variation amplifies probability of resistance in multiplexed gene drive systems", "HSP90 function is required for T2R bitter taste receptor nitric oxide production and innate immune responses in human airway epithelial cells and macrophages", "BubR1 recruitment to the kinetoc...	11
Reprogramming the neuroblastoma epigenome with a mitochondrial uncoupler	[ "SYS-Mut: Decoding the Functional Significance of Rare Somatic Mutations in Cancer", "Immunosuppression and Outcomes in Acute Myeloid Leukemia", "USP28 enables oncogenic transformation of respiratory cells and its inhibition potentiates molecular therapy targeting mutant EGFR, BRAF and PI3K.", "SETDB1 Fuels t...	[ "Pre-determined diversity in resistant fates emerges from homogenous cells after anti-cancer drug treatment", "Generation of transducible version of a recombinant human HAND2 transcription factor from Escherichia coli", "Constricted migration is associated with stable 3D genome structure differences in cancer c...	2
Resistance to EGFR inhibitors in lung cancer occurs through horizontal transfer and is associated with increased caveolins expression	[ "Long-read sequencing of diagnosis and post-therapy medulloblastoma reveals complex rearrangement patterns and epigenetic signatures", "Network profiling of hepatocellular carcinoma targets for evidence based pharmacological approach to improve clinical efficacy", "SKOR1 mediates FER kinase-dependent invasive g...	[ "Convergent extension requires adhesion-dependent biomechanical integration of cell crawling and junction contraction", "Innate triggering and antiviral effector functions of activin A", "Removing the Gβγ-SNAP25 brake on exocytosis enhances insulin action, promotes adipocyte browning, and protects against diet-...	4
PYCR1-dependent proline synthesis in cancer-associated fibroblasts is required for the deposition of pro-tumorigenic extracellular matrix	[ "Transfer learning between preclinical models and human tumors identifies conserved NK cell activation signature in anti-CTLA-4 responsive tumors", "Induction of pancreatic neoplasia in the KRAS/TP53 Oncopig: preliminary report", "A microRNA Signature of Metastatic Colorectal Cancer", "Lineage and Spatial Map...	[ "Powdery mildew effectors AVRA1 and BEC1016 target the ER J-domain protein HvERdj3B required for immunity in barley", "Therapeutic targeting of SETD2-deficient cancer cells with the small-molecule compound RITA", "Multiple metabolic signals including AMPK and PKA regulate glucose-stimulated double strand break ...	4
MEOX2 homeobox gene promotes growth of malignant gliomas	[ "CULTURE AND MAINTENANCE OF URINE-DERIVED, 3-DIMENSIONAL CANINE TRANSITIONAL CELL CARCINOMA ORGANOIDS", "Spontaneous emergence of non-convertible cell states with CD24-High phenotype results in phenotypic heterogeneity that associates with poor prognosis in oral cancer", "Spontaneous differentiation leads to em...	[ "PlotXpress, a webtool for normalization and visualization of reporter expression data", "NF-κB-Inducing Kinase Rewires Metabolic Homeostasis and Promotes Diet-Induced Obesity", "Dissemination and progression of pulmonary Mycobacterium avium infection in mouse model are associated with type 2 macrophage activat...	14
A chemerin peptide analog stimulates tumor growth in two xenograft mouse models of human colorectal carcinoma	[ "Antitumor Effects Of Phytochemicals Of Hot Three Plants On Gastric Adenocarcinoma", "EZH2 inhibition in glioblastoma stem cells increases the expression of neuronal genes and the neuronal developmental regulators ZIC2, ZNF423 and MAFB", "Copy number alterations and epithelial-mesenchymal transition genes in di...	[ "Multiple congenital malformations arise from somatic mosaicism for constitutively active Pik3ca signalling", "Ribosome actuator via the SpoT/ppGpp pathway to mitigate gene overexpression burden", "Disruption of Mitochondrial Quality Control Genes Promotes Caspase-Resistant Cell Survival Following Apoptotic Sti...	4
Regulation of Neuroendocrine Plasticity by the RNA-Binding Protein ZFP36L1	[ "Resistance to chemical carcinogenesis induction via a dampened inflammatory response in naked mole-rats", "Extrachromosomal Amplification of Human Papillomavirus Episomes as a Mechanism of Cervical Carcinogenesis", "Loss of epigenetic regulation disrupts lineage integrity, reactivatesmultipotency and promotes ...	[ "SARS-CoV-2 envelope-protein corruption of homeostatic signaling mechanisms in mammalian cells", "PPRD: a comprehensive online database for expression analysis of ~45,000 plant public RNA-Seq libraries", "PathoClock and PhysioClock in mice recapitulate human multimorbidity and heterogeneous aging", "period Tr...	8
A novel Pyk2-derived peptide inhibits invadopodia-mediated breast cancer metastasis	[ "Hypoxia-mediated suppression of pyruvate carboxylase drives tumor microenvironment immunosuppression", "Identification of plasma proteins associated with oesophageal cancer chemotherapeutic treatment outcomes using SWATH-MS", "Inhibition of mutant IDH1 promotes cycling of acute myeloid leukemia stem cells", ...	[ "YAP restricts renal inflammation and mitigates kidney damage in nephronothisis related kidney disease.", "Structural basis for interaction between CLAMP and MSL2 proteins involved in the specific recruitment of the dosage compensation complex in Drosophila", "Overexpressed microrna-129-5p reverses CCl4-Induced...	4
Keratin 19 interacts with GSK3β to regulate its nuclear accumulation and degradation of cyclin D3	[ "Chromatin Patterns Distinguish Breast Tumor Subtypes and Disease Progression in Association with ANP32E levels", "CRISPR-Cas9 Screen Reveals PSMB3 Contributes to Gliomagenesis Through Proteasome-Dependent and Independent Mechanisms", "Identification of TAZ as the essential molecular switch in orchestrating SCL...	[ "Functional, metabolic and transcriptional maturation of stem cell derived beta cells", "ROKET: Associating Somatic Mutation with Clinical Outcomes through Kernel Regression and Optimal Transport", "The molecular interplay of the establishment of an infection - gene expression of Diaphorina citri gut and Candid...	8
Prostate cancer resistance leads to a global deregulation of translation factors and unconventional translation of long non-coding RNAs	[ "The H3K36me2 writer-reader dependency in H3K27M-DIPG", "Transition to invasive breast cancer is associated with progressive changes in the structure and composition of tumor stroma", "An epigenetic switch regulates the ontogeny of AXL positive/EGFR-TKI resistant cells by modulating miR-335 expression", "Sing...	[ "DetecDiv, a deep-learning platform for automated cell division tracking and replicative lifespan analysis", "A novel Rab11-Rab3a cascade required for lysosome exocytosis", "Multidose evaluation of 6,710 drug repurposing library identifies potent SARS-CoV-2 infection inhibitors In Vitro and In Vivo.", "Nuclea...	11
Hypoxia-directed tumor targeting of CRISPR/Cas9 and HSV-TK suicide gene therapy using lipid nanoparticles	[ "The inflammatory accumulation of lipids and ROS in human Nrf1α-deficient hepatoma cells is ameliorated by 2-bromopalmitate", "Integrative genomics uncover mechanisms of renal medullary carcinoma transformation, microenvironment landscape and therapeutic vulnerabilities.", "Sex Differences in Brain Tumor Glutam...	[ "The nonstructural protein 5 of coronaviruses antagonizes GSDMD-mediated pyroptosis by cleaving and inactivating its pore-forming p30 fragment", "TGF-β-R2 is required for HBP induced acute lung injury and vascular leakage for TGF-/Smad/Rho signaling pathway activation", "3D Visualization of the Podocyte Actin N...	4
Counterfactual Hypothesis Testing of Tumor Microenvironment Scenarios Through Semantic Image Synthesis	[ "Differential impact of mutations in cell cycle checkpoint kinases on breast cancer presentation and prognosis.", "Macrophages orchestrate the expansion of a pro-angiogenic perivascular niche during cancer progression", "Investigating epithelial-mesenchymal heterogeneity of tumors and circulating tumor cells wi...	[ "Plexin-A2 Promotes The Proliferation And The Development Of Tumors From Glioblastoma Derived Cells", "The TRRAP transcription cofactor represses interferon-stimulated genes in colorectal cancer cells", "Hyperbolic Geometry-Based Deep Learning Methods to Produce Population Trees from Genotype Data", "Single c...	5
Dual inhibition of anti-apoptotic proteins BCL-XL and MCL-1 enhances cytotoxicity of Nasopharyngeal carcinoma cells.	[ "Differential effects of high versus low linear energy transfer (LET) radiation on type-I interferon (IFNβ) and TREX1 responses", "Anti-tumor efficacy of an MMAE conjugated antibody targeting cell surface TACE/ADAM17-cleaved Amphiregulin in breast cancer", "Allele-specific expression links diverse cis-regulator...	[ "The RNA binding protein Nab2 genetically interacts with multiple RNA exosome cofactors to regulate target RNAs", "SARS-CoV-2 neutralizing camelid heavy-chain-only antibodies as powerful tools for diagnostic and therapeutic applications", "A Novel Y-Shaped, S-O-N-O-S-Bridged Crosslink between Three Residues C22...	4
iPSC modeling shows uncompensated mitochondrial mediated oxidative stress underlies early heart failure in hypoplastic left heart syndrome	[ "Information transfer in mammalian glycan-based communication", "CRISPR screens for lipid regulators reveal a role for ER-bound SNX13 in lysosomal cholesterol export", "ALKBH5 regulates somatic cell reprogramming in a phase specific manner", "A common SEC23B missense mutation in congenital dyserythropoietic a...	[ "Age-related increase in matrix stiffness downregulates α-Klotho in chondrocytes and induces cartilage degeneration", "Peptidoglycan recognition protein S2 is crucial for activation the Toll pathway against Israeli acute paralysis virus infection in honey bee Apis mellifera", "Interplay between murine sex-biase...	12
ER exit sites in Drosophila display abundant ER-Golgi vesicles and pearled tubes but no megacarriers	[ "Stromal inflammation is a targetable driver of hematopoietic aging", "Function of AtPGAP1 in GPI anchor lipid remodeling and transport to the cell surface of GPI-anchored proteins", "Dual regulation of the actin cytoskeleton by CARMIL-GAP", "Tumor protein D52 (TPD52) affects cancer cell metabolism by negativ...	[ "The Thermosynechococcus genus: wide environmental distribution, but a highly conserved genomic core", "The ASCC2 CUE domain contacts adjacent ubiquitins to recognize K63-linked polyubiquitin", "Building regulatory landscapes: enhancer recruits cohesin to create contact domains, engage CTCF sites and activate d...	13
The type 2 asthma mediator IL-13 inhibits SARS-CoV-2 infection of bronchial epithelium	[ "Metabolomics of aging in primary fibroblasts from small and large breed dogs", "AIM-CICs: automatic identification method for Cell-in-cell structures based on convolutional neural network", "Quantitative mapping of dense microtubule arrays in mammalian neurons", "An anaphase surveillance mechanism prevents m...	[ "Microenvironmental sensing by fibroblasts controls macrophage population size", "The RNA-binding protein RBP42 regulates cellular energy metabolism in mammalian-infective Trypanosoma brucei", "Topological analysis of a bacterial DedA protein associated with alkaline tolerance and antimicrobial resistance.", ...	7
BubR1 recruitment to the kinetochore via Bub1 enhances Spindle Assembly Checkpoint signaling	[ "Cooperation between CYB5R3 and NOX4 via coenzyme Q mitigates endothelial inflammation", "Integrin signaling via actin cytoskeleton activates MRTF/SRF to entrain circadian clock", "O-GlcNAcylation is essential for rapid Pomc expression and cell proliferation in corticotropic tumor cells", "A diabetic milieu i...	[ "Increasing the throughput of sensitive proteomics by plexDIA", "The effector protein CgNLP1 of Colletotrichum gloeosporioides from Hevea brasiliensis disrupts nuclear localization of necrosis-induced transcription factor HbMYB8-like to suppress plant defense signaling", "Single cell chronoatlas of regenerating...	11

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