mauryzio commited on
Commit
b16c084
·
verified ·
1 Parent(s): a52d028

Regenerate with frame-mismatch exclusion and exact 8192 bp sequences

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Files changed (2) hide show
  1. README.md +21 -3
  2. syn_human/test-00000-of-00001.parquet +2 -2
README.md CHANGED
@@ -165,6 +165,8 @@ dataset_info:
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  features:
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  - name: benchmark_id
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  dtype: string
 
 
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  - name: annotation_source
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  dtype: string
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  - name: genome_assembly
@@ -183,12 +185,24 @@ dataset_info:
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  dtype: string
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  - name: chr
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  dtype: string
 
 
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  - name: strand
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  dtype: string
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  - name: cds_genome_start
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  dtype: int64
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  - name: cds_genome_end
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  dtype: int64
 
 
 
 
 
 
 
 
 
 
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  - name: transcript_id
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  dtype: string
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  - name: gene_id
@@ -199,6 +213,10 @@ dataset_info:
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  dtype: int64
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  - name: is_first_exon
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  dtype: int64
 
 
 
 
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  - name: cds_start_in_seq
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  dtype: int64
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  - name: cds_end_in_seq
@@ -225,10 +243,10 @@ dataset_info:
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  dtype: string
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  splits:
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  - name: test
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- num_bytes: 334444599
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  num_examples: 20000
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- download_size: 152353795
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- dataset_size: 334444599
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  - config_name: syn_mouse
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  features:
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  - name: benchmark_id
 
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  features:
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  - name: benchmark_id
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  dtype: string
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+ - name: script_version
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+ dtype: string
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  - name: annotation_source
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  dtype: string
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  - name: genome_assembly
 
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  dtype: string
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  - name: chr
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  dtype: string
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+ - name: chrom_length
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+ dtype: int64
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  - name: strand
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  dtype: string
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  - name: cds_genome_start
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  dtype: int64
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  - name: cds_genome_end
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  dtype: int64
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+ - name: window_genome_start
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+ dtype: int64
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+ - name: window_genome_end
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+ dtype: int64
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+ - name: upstream_actual
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+ dtype: int64
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+ - name: downstream_actual
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+ dtype: int64
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+ - name: is_clamped
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+ dtype: int64
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  - name: transcript_id
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  dtype: string
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  - name: gene_id
 
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  dtype: int64
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  - name: is_first_exon
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  dtype: int64
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+ - name: frame
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+ dtype: int64
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+ - name: phase_gtf
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+ dtype: int64
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  - name: cds_start_in_seq
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  dtype: int64
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  - name: cds_end_in_seq
 
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  dtype: string
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  splits:
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  - name: test
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+ num_bytes: 335904126
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  num_examples: 20000
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+ download_size: 152737063
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+ dataset_size: 335904126
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  - config_name: syn_mouse
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  features:
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  - name: benchmark_id
syn_human/test-00000-of-00001.parquet CHANGED
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