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Record verified TCGA hibou_l branch integration

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Update cumulative upload ledger and dataset card after branch integration job 8743456.

Files changed (7) hide show
  1. README.md +204 -6
  2. metadata/h5_validation.parquet +2 -2
  3. metadata/nested_index.json +1378 -0
  4. metadata/release.json +98 -2
  5. metadata/shard_manifest.parquet +2 -2
  6. metadata/slide_registry.parquet +2 -2
  7. metadata/upload_status.json +596 -483
README.md CHANGED
@@ -724,6 +724,204 @@ configs:
724
  path: data/TCGA-UCS/gigapath_slide/20x/*.parquet
725
  - split: TCGA_UVM
726
  path: data/TCGA-UVM/gigapath_slide/20x/*.parquet
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
727
  - config_name: titan_20x
728
  data_files:
729
  - split: TCGA_ACC
@@ -1200,12 +1398,12 @@ data/{project_id}/{model_name}/{magnification}/part-*.parquet
1200
 
1201
  ## Included release scope
1202
 
1203
- - Models: chief, conch_v1, ctranspath, gigapath, gigapath_slide, titan, uni_v1, uni_v2
1204
- - Groups: 575
1205
- - Shards: 4,391
1206
- - Embedding rows: 3,723,984
1207
- - Registry rows: 209,764
1208
- - H5 validation rows: 209,764
1209
  - H5 validation failures: 0
1210
 
1211
  Each row is a chunk of patch or slide embeddings from one TCGA slide.
 
724
  path: data/TCGA-UCS/gigapath_slide/20x/*.parquet
725
  - split: TCGA_UVM
726
  path: data/TCGA-UVM/gigapath_slide/20x/*.parquet
727
+ - config_name: hibou_l_10x
728
+ data_files:
729
+ - split: TCGA_ACC
730
+ path: data/TCGA-ACC/hibou_l/10x/*.parquet
731
+ - split: TCGA_BLCA
732
+ path: data/TCGA-BLCA/hibou_l/10x/*.parquet
733
+ - split: TCGA_BRCA
734
+ path: data/TCGA-BRCA/hibou_l/10x/*.parquet
735
+ - split: TCGA_CESC
736
+ path: data/TCGA-CESC/hibou_l/10x/*.parquet
737
+ - split: TCGA_CHOL
738
+ path: data/TCGA-CHOL/hibou_l/10x/*.parquet
739
+ - split: TCGA_COAD
740
+ path: data/TCGA-COAD/hibou_l/10x/*.parquet
741
+ - split: TCGA_DLBC
742
+ path: data/TCGA-DLBC/hibou_l/10x/*.parquet
743
+ - split: TCGA_ESCA
744
+ path: data/TCGA-ESCA/hibou_l/10x/*.parquet
745
+ - split: TCGA_GBM
746
+ path: data/TCGA-GBM/hibou_l/10x/*.parquet
747
+ - split: TCGA_HNSC
748
+ path: data/TCGA-HNSC/hibou_l/10x/*.parquet
749
+ - split: TCGA_KICH
750
+ path: data/TCGA-KICH/hibou_l/10x/*.parquet
751
+ - split: TCGA_KIRC
752
+ path: data/TCGA-KIRC/hibou_l/10x/*.parquet
753
+ - split: TCGA_KIRP
754
+ path: data/TCGA-KIRP/hibou_l/10x/*.parquet
755
+ - split: TCGA_LGG
756
+ path: data/TCGA-LGG/hibou_l/10x/*.parquet
757
+ - split: TCGA_LIHC
758
+ path: data/TCGA-LIHC/hibou_l/10x/*.parquet
759
+ - split: TCGA_LUAD
760
+ path: data/TCGA-LUAD/hibou_l/10x/*.parquet
761
+ - split: TCGA_LUSC
762
+ path: data/TCGA-LUSC/hibou_l/10x/*.parquet
763
+ - split: TCGA_MESO
764
+ path: data/TCGA-MESO/hibou_l/10x/*.parquet
765
+ - split: TCGA_OV
766
+ path: data/TCGA-OV/hibou_l/10x/*.parquet
767
+ - split: TCGA_PAAD
768
+ path: data/TCGA-PAAD/hibou_l/10x/*.parquet
769
+ - split: TCGA_PCPG
770
+ path: data/TCGA-PCPG/hibou_l/10x/*.parquet
771
+ - split: TCGA_PRAD
772
+ path: data/TCGA-PRAD/hibou_l/10x/*.parquet
773
+ - split: TCGA_READ
774
+ path: data/TCGA-READ/hibou_l/10x/*.parquet
775
+ - split: TCGA_SARC
776
+ path: data/TCGA-SARC/hibou_l/10x/*.parquet
777
+ - split: TCGA_SKCM
778
+ path: data/TCGA-SKCM/hibou_l/10x/*.parquet
779
+ - split: TCGA_STAD
780
+ path: data/TCGA-STAD/hibou_l/10x/*.parquet
781
+ - split: TCGA_TGCT
782
+ path: data/TCGA-TGCT/hibou_l/10x/*.parquet
783
+ - split: TCGA_THCA
784
+ path: data/TCGA-THCA/hibou_l/10x/*.parquet
785
+ - split: TCGA_THYM
786
+ path: data/TCGA-THYM/hibou_l/10x/*.parquet
787
+ - split: TCGA_UCEC
788
+ path: data/TCGA-UCEC/hibou_l/10x/*.parquet
789
+ - split: TCGA_UCS
790
+ path: data/TCGA-UCS/hibou_l/10x/*.parquet
791
+ - split: TCGA_UVM
792
+ path: data/TCGA-UVM/hibou_l/10x/*.parquet
793
+ - config_name: hibou_l_20x
794
+ data_files:
795
+ - split: TCGA_ACC
796
+ path: data/TCGA-ACC/hibou_l/20x/*.parquet
797
+ - split: TCGA_BLCA
798
+ path: data/TCGA-BLCA/hibou_l/20x/*.parquet
799
+ - split: TCGA_BRCA
800
+ path: data/TCGA-BRCA/hibou_l/20x/*.parquet
801
+ - split: TCGA_CESC
802
+ path: data/TCGA-CESC/hibou_l/20x/*.parquet
803
+ - split: TCGA_CHOL
804
+ path: data/TCGA-CHOL/hibou_l/20x/*.parquet
805
+ - split: TCGA_COAD
806
+ path: data/TCGA-COAD/hibou_l/20x/*.parquet
807
+ - split: TCGA_DLBC
808
+ path: data/TCGA-DLBC/hibou_l/20x/*.parquet
809
+ - split: TCGA_ESCA
810
+ path: data/TCGA-ESCA/hibou_l/20x/*.parquet
811
+ - split: TCGA_GBM
812
+ path: data/TCGA-GBM/hibou_l/20x/*.parquet
813
+ - split: TCGA_HNSC
814
+ path: data/TCGA-HNSC/hibou_l/20x/*.parquet
815
+ - split: TCGA_KICH
816
+ path: data/TCGA-KICH/hibou_l/20x/*.parquet
817
+ - split: TCGA_KIRC
818
+ path: data/TCGA-KIRC/hibou_l/20x/*.parquet
819
+ - split: TCGA_KIRP
820
+ path: data/TCGA-KIRP/hibou_l/20x/*.parquet
821
+ - split: TCGA_LGG
822
+ path: data/TCGA-LGG/hibou_l/20x/*.parquet
823
+ - split: TCGA_LIHC
824
+ path: data/TCGA-LIHC/hibou_l/20x/*.parquet
825
+ - split: TCGA_LUAD
826
+ path: data/TCGA-LUAD/hibou_l/20x/*.parquet
827
+ - split: TCGA_LUSC
828
+ path: data/TCGA-LUSC/hibou_l/20x/*.parquet
829
+ - split: TCGA_MESO
830
+ path: data/TCGA-MESO/hibou_l/20x/*.parquet
831
+ - split: TCGA_OV
832
+ path: data/TCGA-OV/hibou_l/20x/*.parquet
833
+ - split: TCGA_PAAD
834
+ path: data/TCGA-PAAD/hibou_l/20x/*.parquet
835
+ - split: TCGA_PCPG
836
+ path: data/TCGA-PCPG/hibou_l/20x/*.parquet
837
+ - split: TCGA_PRAD
838
+ path: data/TCGA-PRAD/hibou_l/20x/*.parquet
839
+ - split: TCGA_READ
840
+ path: data/TCGA-READ/hibou_l/20x/*.parquet
841
+ - split: TCGA_SARC
842
+ path: data/TCGA-SARC/hibou_l/20x/*.parquet
843
+ - split: TCGA_SKCM
844
+ path: data/TCGA-SKCM/hibou_l/20x/*.parquet
845
+ - split: TCGA_STAD
846
+ path: data/TCGA-STAD/hibou_l/20x/*.parquet
847
+ - split: TCGA_TGCT
848
+ path: data/TCGA-TGCT/hibou_l/20x/*.parquet
849
+ - split: TCGA_THCA
850
+ path: data/TCGA-THCA/hibou_l/20x/*.parquet
851
+ - split: TCGA_THYM
852
+ path: data/TCGA-THYM/hibou_l/20x/*.parquet
853
+ - split: TCGA_UCEC
854
+ path: data/TCGA-UCEC/hibou_l/20x/*.parquet
855
+ - split: TCGA_UCS
856
+ path: data/TCGA-UCS/hibou_l/20x/*.parquet
857
+ - split: TCGA_UVM
858
+ path: data/TCGA-UVM/hibou_l/20x/*.parquet
859
+ - config_name: hibou_l_5x
860
+ data_files:
861
+ - split: TCGA_ACC
862
+ path: data/TCGA-ACC/hibou_l/5x/*.parquet
863
+ - split: TCGA_BLCA
864
+ path: data/TCGA-BLCA/hibou_l/5x/*.parquet
865
+ - split: TCGA_BRCA
866
+ path: data/TCGA-BRCA/hibou_l/5x/*.parquet
867
+ - split: TCGA_CESC
868
+ path: data/TCGA-CESC/hibou_l/5x/*.parquet
869
+ - split: TCGA_CHOL
870
+ path: data/TCGA-CHOL/hibou_l/5x/*.parquet
871
+ - split: TCGA_COAD
872
+ path: data/TCGA-COAD/hibou_l/5x/*.parquet
873
+ - split: TCGA_DLBC
874
+ path: data/TCGA-DLBC/hibou_l/5x/*.parquet
875
+ - split: TCGA_ESCA
876
+ path: data/TCGA-ESCA/hibou_l/5x/*.parquet
877
+ - split: TCGA_GBM
878
+ path: data/TCGA-GBM/hibou_l/5x/*.parquet
879
+ - split: TCGA_HNSC
880
+ path: data/TCGA-HNSC/hibou_l/5x/*.parquet
881
+ - split: TCGA_KICH
882
+ path: data/TCGA-KICH/hibou_l/5x/*.parquet
883
+ - split: TCGA_KIRC
884
+ path: data/TCGA-KIRC/hibou_l/5x/*.parquet
885
+ - split: TCGA_KIRP
886
+ path: data/TCGA-KIRP/hibou_l/5x/*.parquet
887
+ - split: TCGA_LGG
888
+ path: data/TCGA-LGG/hibou_l/5x/*.parquet
889
+ - split: TCGA_LIHC
890
+ path: data/TCGA-LIHC/hibou_l/5x/*.parquet
891
+ - split: TCGA_LUAD
892
+ path: data/TCGA-LUAD/hibou_l/5x/*.parquet
893
+ - split: TCGA_LUSC
894
+ path: data/TCGA-LUSC/hibou_l/5x/*.parquet
895
+ - split: TCGA_MESO
896
+ path: data/TCGA-MESO/hibou_l/5x/*.parquet
897
+ - split: TCGA_OV
898
+ path: data/TCGA-OV/hibou_l/5x/*.parquet
899
+ - split: TCGA_PAAD
900
+ path: data/TCGA-PAAD/hibou_l/5x/*.parquet
901
+ - split: TCGA_PCPG
902
+ path: data/TCGA-PCPG/hibou_l/5x/*.parquet
903
+ - split: TCGA_PRAD
904
+ path: data/TCGA-PRAD/hibou_l/5x/*.parquet
905
+ - split: TCGA_READ
906
+ path: data/TCGA-READ/hibou_l/5x/*.parquet
907
+ - split: TCGA_SARC
908
+ path: data/TCGA-SARC/hibou_l/5x/*.parquet
909
+ - split: TCGA_SKCM
910
+ path: data/TCGA-SKCM/hibou_l/5x/*.parquet
911
+ - split: TCGA_STAD
912
+ path: data/TCGA-STAD/hibou_l/5x/*.parquet
913
+ - split: TCGA_TGCT
914
+ path: data/TCGA-TGCT/hibou_l/5x/*.parquet
915
+ - split: TCGA_THCA
916
+ path: data/TCGA-THCA/hibou_l/5x/*.parquet
917
+ - split: TCGA_THYM
918
+ path: data/TCGA-THYM/hibou_l/5x/*.parquet
919
+ - split: TCGA_UCEC
920
+ path: data/TCGA-UCEC/hibou_l/5x/*.parquet
921
+ - split: TCGA_UCS
922
+ path: data/TCGA-UCS/hibou_l/5x/*.parquet
923
+ - split: TCGA_UVM
924
+ path: data/TCGA-UVM/hibou_l/5x/*.parquet
925
  - config_name: titan_20x
926
  data_files:
927
  - split: TCGA_ACC
 
1398
 
1399
  ## Included release scope
1400
 
1401
+ - Models: chief, conch_v1, ctranspath, gigapath, gigapath_slide, hibou_l, titan, uni_v1, uni_v2
1402
+ - Groups: 671
1403
+ - Shards: 5,513
1404
+ - Embedding rows: 4,838,064
1405
+ - Registry rows: 244,768
1406
+ - H5 validation rows: 244,768
1407
  - H5 validation failures: 0
1408
 
1409
  Each row is a chunk of patch or slide embeddings from one TCGA slide.
metadata/h5_validation.parquet CHANGED
@@ -1,3 +1,3 @@
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- size 14733346
 
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  version https://git-lfs.github.com/spec/v1
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+ size 17263879
metadata/nested_index.json CHANGED
@@ -91,6 +91,43 @@
91
  "data/TCGA-ACC/gigapath_slide/20x/part-00000.parquet"
92
  ]
93
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
94
  "titan": {
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  "20x": [
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  "data/TCGA-ACC/titan/20x/part-00000.parquet"
@@ -312,6 +349,70 @@
312
  "data/TCGA-BLCA/gigapath_slide/20x/part-00000.parquet"
313
  ]
314
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
315
  "titan": {
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  "20x": [
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  "data/TCGA-BLCA/titan/20x/part-00000.parquet"
@@ -681,6 +782,123 @@
681
  "data/TCGA-BRCA/gigapath_slide/20x/part-00000.parquet"
682
  ]
683
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
684
  "titan": {
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  "20x": [
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  "data/TCGA-BRCA/titan/20x/part-00000.parquet"
@@ -991,6 +1209,35 @@
991
  "data/TCGA-CESC/gigapath_slide/20x/part-00000.parquet"
992
  ]
993
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
994
  "titan": {
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  "20x": [
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  "data/TCGA-CESC/titan/20x/part-00000.parquet"
@@ -1106,6 +1353,20 @@
1106
  "data/TCGA-CHOL/gigapath_slide/20x/part-00000.parquet"
1107
  ]
1108
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1109
  "titan": {
1110
  "20x": [
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  "data/TCGA-CHOL/titan/20x/part-00000.parquet"
@@ -1234,6 +1495,45 @@
1234
  "data/TCGA-COAD/gigapath_slide/20x/part-00000.parquet"
1235
  ]
1236
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1237
  "titan": {
1238
  "20x": [
1239
  "data/TCGA-COAD/titan/20x/part-00000.parquet"
@@ -1362,6 +1662,19 @@
1362
  "data/TCGA-DLBC/gigapath_slide/20x/part-00000.parquet"
1363
  ]
1364
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
1365
  "titan": {
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  "20x": [
1367
  "data/TCGA-DLBC/titan/20x/part-00000.parquet"
@@ -1456,6 +1769,28 @@
1456
  "data/TCGA-ESCA/gigapath_slide/20x/part-00000.parquet"
1457
  ]
1458
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1459
  "titan": {
1460
  "20x": [
1461
  "data/TCGA-ESCA/titan/20x/part-00000.parquet"
@@ -1652,6 +1987,74 @@
1652
  "data/TCGA-GBM/gigapath_slide/20x/part-00000.parquet"
1653
  ]
1654
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1655
  "titan": {
1656
  "20x": [
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  "data/TCGA-GBM/titan/20x/part-00000.parquet"
@@ -1896,6 +2299,52 @@
1896
  "data/TCGA-HNSC/gigapath_slide/20x/part-00000.parquet"
1897
  ]
1898
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1899
  "titan": {
1900
  "20x": [
1901
  "data/TCGA-HNSC/titan/20x/part-00000.parquet"
@@ -2054,6 +2503,28 @@
2054
  "data/TCGA-KICH/gigapath_slide/20x/part-00000.parquet"
2055
  ]
2056
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
2057
  "titan": {
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  "20x": [
2059
  "data/TCGA-KICH/titan/20x/part-00000.parquet"
@@ -2237,6 +2708,68 @@
2237
  "data/TCGA-KIRC/gigapath_slide/20x/part-00000.parquet"
2238
  ]
2239
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
2240
  "titan": {
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  "data/TCGA-KIRC/titan/20x/part-00000.parquet"
@@ -2453,6 +2986,43 @@
2453
  "data/TCGA-KIRP/gigapath_slide/20x/part-00000.parquet"
2454
  ]
2455
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
2456
  "titan": {
2457
  "20x": [
2458
  "data/TCGA-KIRP/titan/20x/part-00000.parquet"
@@ -2681,6 +3251,76 @@
2681
  "data/TCGA-LGG/gigapath_slide/20x/part-00000.parquet"
2682
  ]
2683
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
2684
  "titan": {
2685
  "20x": [
2686
  "data/TCGA-LGG/titan/20x/part-00000.parquet"
@@ -2927,6 +3567,50 @@
2927
  "data/TCGA-LIHC/gigapath_slide/20x/part-00000.parquet"
2928
  ]
2929
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
2930
  "titan": {
2931
  "20x": [
2932
  "data/TCGA-LIHC/titan/20x/part-00000.parquet"
@@ -3142,6 +3826,60 @@
3142
  "data/TCGA-LUAD/gigapath_slide/20x/part-00000.parquet"
3143
  ]
3144
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
3145
  "titan": {
3146
  "20x": [
3147
  "data/TCGA-LUAD/titan/20x/part-00000.parquet"
@@ -3372,6 +4110,60 @@
3372
  "data/TCGA-LUSC/gigapath_slide/20x/part-00000.parquet"
3373
  ]
3374
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
3375
  "titan": {
3376
  "20x": [
3377
  "data/TCGA-LUSC/titan/20x/part-00000.parquet"
@@ -3533,6 +4325,22 @@
3533
  "data/TCGA-MESO/gigapath_slide/20x/part-00000.parquet"
3534
  ]
3535
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3536
  "titan": {
3537
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3538
  "data/TCGA-MESO/titan/20x/part-00000.parquet"
@@ -3630,6 +4438,27 @@
3630
  "data/TCGA-OV/gigapath_slide/20x/part-00000.parquet"
3631
  ]
3632
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
3633
  "titan": {
3634
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3635
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@@ -3752,6 +4581,34 @@
3752
  "data/TCGA-PAAD/gigapath_slide/20x/part-00000.parquet"
3753
  ]
3754
  },
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
3755
  "titan": {
3756
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3757
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@@ -3893,6 +4750,37 @@
3893
  "data/TCGA-PCPG/gigapath_slide/20x/part-00000.parquet"
3894
  ]
3895
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3896
  "titan": {
3897
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3898
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4074
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4075
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4076
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4077
  "titan": {
4078
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4079
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@@ -4233,6 +5171,24 @@
4233
  "data/TCGA-READ/gigapath_slide/20x/part-00000.parquet"
4234
  ]
4235
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4236
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4237
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4238
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@@ -4447,6 +5403,87 @@
4447
  "data/TCGA-SARC/gigapath_slide/20x/part-00000.parquet"
4448
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4449
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4450
  "titan": {
4451
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4452
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@@ -4740,6 +5777,65 @@
4740
  "data/TCGA-SKCM/gigapath_slide/20x/part-00000.parquet"
4741
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4742
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4743
  "titan": {
4744
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4745
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@@ -4959,6 +6055,49 @@
4959
  "data/TCGA-STAD/gigapath_slide/20x/part-00000.parquet"
4960
  ]
4961
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4962
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4963
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4964
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@@ -5134,6 +6273,44 @@
5134
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5135
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5136
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5137
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5139
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5344
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5345
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5346
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5347
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5543
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5544
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5545
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5546
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5768
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5769
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5770
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5771
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5979
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5980
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5981
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5982
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6077
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6078
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6079
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6080
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883
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884
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886
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889
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891
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892
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895
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896
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898
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899
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900
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901
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902
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903
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1209
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1211
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1238
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1239
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1240
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1241
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1242
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1243
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1353
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1354
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1355
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1356
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1357
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1366
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1367
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1368
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1369
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1370
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1371
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1372
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1495
  "data/TCGA-COAD/gigapath_slide/20x/part-00000.parquet"
1496
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1497
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1498
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1499
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1500
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1501
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1502
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1503
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1504
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1505
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1506
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1507
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1509
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1510
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1519
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1520
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1524
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1527
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1528
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1529
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1530
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1531
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1532
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1534
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1535
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1536
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1537
  "titan": {
1538
  "20x": [
1539
  "data/TCGA-COAD/titan/20x/part-00000.parquet"
 
1662
  "data/TCGA-DLBC/gigapath_slide/20x/part-00000.parquet"
1663
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1664
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1665
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1666
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1667
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1668
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1669
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1670
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1671
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1672
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1673
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1674
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1675
+ "data/TCGA-DLBC/hibou_l/5x/part-00000.parquet"
1676
+ ]
1677
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1678
  "titan": {
1679
  "20x": [
1680
  "data/TCGA-DLBC/titan/20x/part-00000.parquet"
 
1769
  "data/TCGA-ESCA/gigapath_slide/20x/part-00000.parquet"
1770
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1771
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1772
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1773
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1774
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1775
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1776
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1777
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1778
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1779
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1780
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1781
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1782
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1783
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1784
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1785
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1786
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1787
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1788
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1789
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1790
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1791
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1792
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1793
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1794
  "titan": {
1795
  "20x": [
1796
  "data/TCGA-ESCA/titan/20x/part-00000.parquet"
 
1987
  "data/TCGA-GBM/gigapath_slide/20x/part-00000.parquet"
1988
  ]
1989
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1990
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1991
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1992
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1993
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1994
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1995
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1996
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1997
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1998
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1999
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2000
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2001
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2002
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2003
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2004
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2029
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2030
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2037
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2038
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2039
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2040
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2041
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2042
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2043
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2044
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2045
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2049
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2050
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2053
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2054
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2055
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2056
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2057
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2058
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2059
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2060
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2299
  "data/TCGA-HNSC/gigapath_slide/20x/part-00000.parquet"
2300
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2301
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2302
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2303
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2317
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2318
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2320
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2321
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2322
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2323
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2324
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2325
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2326
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2327
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2328
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2330
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2331
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2332
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2333
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2334
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2335
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2336
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2337
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2338
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2339
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2340
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2341
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2342
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2343
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2345
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2346
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2347
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2348
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2349
  "20x": [
2350
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2503
  "data/TCGA-KICH/gigapath_slide/20x/part-00000.parquet"
2504
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2505
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2506
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2507
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2508
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2509
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2510
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2511
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2512
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2514
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2515
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2516
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2517
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2518
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2519
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2520
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2521
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2522
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2523
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2524
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2525
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2526
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2527
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2528
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2529
  "20x": [
2530
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2708
  "data/TCGA-KIRC/gigapath_slide/20x/part-00000.parquet"
2709
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2710
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2711
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2712
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2986
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3024
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3026
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3028
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3251
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3252
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3322
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3325
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3567
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3568
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3611
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3612
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3613
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3614
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3826
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3827
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3828
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3829
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4110
  "data/TCGA-LUSC/gigapath_slide/20x/part-00000.parquet"
4111
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4112
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4119
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4137
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4138
+ "data/TCGA-LUSC/hibou_l/20x/part-00012.parquet",
4139
+ "data/TCGA-LUSC/hibou_l/20x/part-00013.parquet",
4140
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4141
+ "data/TCGA-LUSC/hibou_l/20x/part-00015.parquet",
4142
+ "data/TCGA-LUSC/hibou_l/20x/part-00016.parquet",
4143
+ "data/TCGA-LUSC/hibou_l/20x/part-00017.parquet",
4144
+ "data/TCGA-LUSC/hibou_l/20x/part-00018.parquet",
4145
+ "data/TCGA-LUSC/hibou_l/20x/part-00019.parquet",
4146
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4147
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4148
+ "data/TCGA-LUSC/hibou_l/20x/part-00022.parquet",
4149
+ "data/TCGA-LUSC/hibou_l/20x/part-00023.parquet",
4150
+ "data/TCGA-LUSC/hibou_l/20x/part-00024.parquet",
4151
+ "data/TCGA-LUSC/hibou_l/20x/part-00025.parquet",
4152
+ "data/TCGA-LUSC/hibou_l/20x/part-00026.parquet",
4153
+ "data/TCGA-LUSC/hibou_l/20x/part-00027.parquet",
4154
+ "data/TCGA-LUSC/hibou_l/20x/part-00028.parquet",
4155
+ "data/TCGA-LUSC/hibou_l/20x/part-00029.parquet",
4156
+ "data/TCGA-LUSC/hibou_l/20x/part-00030.parquet",
4157
+ "data/TCGA-LUSC/hibou_l/20x/part-00031.parquet",
4158
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4159
+ "data/TCGA-LUSC/hibou_l/20x/part-00033.parquet"
4160
+ ],
4161
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4163
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4164
+ "data/TCGA-LUSC/hibou_l/5x/part-00002.parquet"
4165
+ ]
4166
+ },
4167
  "titan": {
4168
  "20x": [
4169
  "data/TCGA-LUSC/titan/20x/part-00000.parquet"
 
4325
  "data/TCGA-MESO/gigapath_slide/20x/part-00000.parquet"
4326
  ]
4327
  },
4328
+ "hibou_l": {
4329
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4330
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4331
+ "data/TCGA-MESO/hibou_l/10x/part-00001.parquet"
4332
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4333
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4335
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4336
+ "data/TCGA-MESO/hibou_l/20x/part-00002.parquet",
4337
+ "data/TCGA-MESO/hibou_l/20x/part-00003.parquet",
4338
+ "data/TCGA-MESO/hibou_l/20x/part-00004.parquet"
4339
+ ],
4340
+ "5x": [
4341
+ "data/TCGA-MESO/hibou_l/5x/part-00000.parquet"
4342
+ ]
4343
+ },
4344
  "titan": {
4345
  "20x": [
4346
  "data/TCGA-MESO/titan/20x/part-00000.parquet"
 
4438
  "data/TCGA-OV/gigapath_slide/20x/part-00000.parquet"
4439
  ]
4440
  },
4441
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4442
+ "10x": [
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4444
+ "data/TCGA-OV/hibou_l/10x/part-00001.parquet",
4445
+ "data/TCGA-OV/hibou_l/10x/part-00002.parquet"
4446
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4447
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4448
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4449
+ "data/TCGA-OV/hibou_l/20x/part-00001.parquet",
4450
+ "data/TCGA-OV/hibou_l/20x/part-00002.parquet",
4451
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4452
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4456
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4457
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4458
+ "5x": [
4459
+ "data/TCGA-OV/hibou_l/5x/part-00000.parquet"
4460
+ ]
4461
+ },
4462
  "titan": {
4463
  "20x": [
4464
  "data/TCGA-OV/titan/20x/part-00000.parquet"
 
4581
  "data/TCGA-PAAD/gigapath_slide/20x/part-00000.parquet"
4582
  ]
4583
  },
4584
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4585
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+ "data/TCGA-PAAD/hibou_l/10x/part-00000.parquet",
4587
+ "data/TCGA-PAAD/hibou_l/10x/part-00001.parquet",
4588
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4589
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4590
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4593
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4594
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4608
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4609
+ "data/TCGA-PAAD/hibou_l/5x/part-00000.parquet"
4610
+ ]
4611
+ },
4612
  "titan": {
4613
  "20x": [
4614
  "data/TCGA-PAAD/titan/20x/part-00000.parquet"
 
4750
  "data/TCGA-PCPG/gigapath_slide/20x/part-00000.parquet"
4751
  ]
4752
  },
4753
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4754
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4769
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4775
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4777
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4779
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4781
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4782
+ ]
4783
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4784
  "titan": {
4785
  "20x": [
4786
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4962
  "data/TCGA-PRAD/gigapath_slide/20x/part-00000.parquet"
4963
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4964
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4965
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4968
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5000
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5001
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5002
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5003
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5004
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5005
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5006
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5007
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5008
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5009
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5011
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5012
+ "data/TCGA-PRAD/hibou_l/5x/part-00002.parquet"
5013
+ ]
5014
+ },
5015
  "titan": {
5016
  "20x": [
5017
  "data/TCGA-PRAD/titan/20x/part-00000.parquet"
 
5171
  "data/TCGA-READ/gigapath_slide/20x/part-00000.parquet"
5172
  ]
5173
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5174
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5175
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5178
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5186
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5187
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5188
+ "5x": [
5189
+ "data/TCGA-READ/hibou_l/5x/part-00000.parquet"
5190
+ ]
5191
+ },
5192
  "titan": {
5193
  "20x": [
5194
  "data/TCGA-READ/titan/20x/part-00000.parquet"
 
5403
  "data/TCGA-SARC/gigapath_slide/20x/part-00000.parquet"
5404
  ]
5405
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5406
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5407
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5422
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5423
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5484
+ "data/TCGA-SARC/hibou_l/5x/part-00003.parquet"
5485
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5486
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5487
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5488
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5489
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5777
  "data/TCGA-SKCM/gigapath_slide/20x/part-00000.parquet"
5778
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5779
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5823
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5825
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5836
+ "data/TCGA-SKCM/hibou_l/5x/part-00002.parquet"
5837
+ ]
5838
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5839
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5840
  "20x": [
5841
  "data/TCGA-SKCM/titan/20x/part-00000.parquet"
 
6055
  "data/TCGA-STAD/gigapath_slide/20x/part-00000.parquet"
6056
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6057
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6098
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6099
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6100
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6101
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6102
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6103
  "data/TCGA-STAD/titan/20x/part-00000.parquet"
 
6273
  "data/TCGA-TGCT/gigapath_slide/20x/part-00000.parquet"
6274
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6275
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6311
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6312
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6313
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6314
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6315
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6316
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6521
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6522
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6580
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6581
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6582
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6583
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6584
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6585
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6779
  "data/TCGA-THYM/gigapath_slide/20x/part-00000.parquet"
6780
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6781
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6782
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6789
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6810
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6811
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6812
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6813
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6814
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6815
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7035
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7036
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7037
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+ "data/TCGA-UCEC/hibou_l/10x/part-00007.parquet",
7048
+ "data/TCGA-UCEC/hibou_l/10x/part-00008.parquet",
7049
+ "data/TCGA-UCEC/hibou_l/10x/part-00009.parquet",
7050
+ "data/TCGA-UCEC/hibou_l/10x/part-00010.parquet",
7051
+ "data/TCGA-UCEC/hibou_l/10x/part-00011.parquet",
7052
+ "data/TCGA-UCEC/hibou_l/10x/part-00012.parquet"
7053
+ ],
7054
+ "20x": [
7055
+ "data/TCGA-UCEC/hibou_l/20x/part-00000.parquet",
7056
+ "data/TCGA-UCEC/hibou_l/20x/part-00001.parquet",
7057
+ "data/TCGA-UCEC/hibou_l/20x/part-00002.parquet",
7058
+ "data/TCGA-UCEC/hibou_l/20x/part-00003.parquet",
7059
+ "data/TCGA-UCEC/hibou_l/20x/part-00004.parquet",
7060
+ "data/TCGA-UCEC/hibou_l/20x/part-00005.parquet",
7061
+ "data/TCGA-UCEC/hibou_l/20x/part-00006.parquet",
7062
+ "data/TCGA-UCEC/hibou_l/20x/part-00007.parquet",
7063
+ "data/TCGA-UCEC/hibou_l/20x/part-00008.parquet",
7064
+ "data/TCGA-UCEC/hibou_l/20x/part-00009.parquet",
7065
+ "data/TCGA-UCEC/hibou_l/20x/part-00010.parquet",
7066
+ "data/TCGA-UCEC/hibou_l/20x/part-00011.parquet",
7067
+ "data/TCGA-UCEC/hibou_l/20x/part-00012.parquet",
7068
+ "data/TCGA-UCEC/hibou_l/20x/part-00013.parquet",
7069
+ "data/TCGA-UCEC/hibou_l/20x/part-00014.parquet",
7070
+ "data/TCGA-UCEC/hibou_l/20x/part-00015.parquet",
7071
+ "data/TCGA-UCEC/hibou_l/20x/part-00016.parquet",
7072
+ "data/TCGA-UCEC/hibou_l/20x/part-00017.parquet",
7073
+ "data/TCGA-UCEC/hibou_l/20x/part-00018.parquet",
7074
+ "data/TCGA-UCEC/hibou_l/20x/part-00019.parquet",
7075
+ "data/TCGA-UCEC/hibou_l/20x/part-00020.parquet",
7076
+ "data/TCGA-UCEC/hibou_l/20x/part-00021.parquet",
7077
+ "data/TCGA-UCEC/hibou_l/20x/part-00022.parquet",
7078
+ "data/TCGA-UCEC/hibou_l/20x/part-00023.parquet",
7079
+ "data/TCGA-UCEC/hibou_l/20x/part-00024.parquet",
7080
+ "data/TCGA-UCEC/hibou_l/20x/part-00025.parquet",
7081
+ "data/TCGA-UCEC/hibou_l/20x/part-00026.parquet",
7082
+ "data/TCGA-UCEC/hibou_l/20x/part-00027.parquet",
7083
+ "data/TCGA-UCEC/hibou_l/20x/part-00028.parquet",
7084
+ "data/TCGA-UCEC/hibou_l/20x/part-00029.parquet",
7085
+ "data/TCGA-UCEC/hibou_l/20x/part-00030.parquet",
7086
+ "data/TCGA-UCEC/hibou_l/20x/part-00031.parquet",
7087
+ "data/TCGA-UCEC/hibou_l/20x/part-00032.parquet",
7088
+ "data/TCGA-UCEC/hibou_l/20x/part-00033.parquet",
7089
+ "data/TCGA-UCEC/hibou_l/20x/part-00034.parquet",
7090
+ "data/TCGA-UCEC/hibou_l/20x/part-00035.parquet",
7091
+ "data/TCGA-UCEC/hibou_l/20x/part-00036.parquet",
7092
+ "data/TCGA-UCEC/hibou_l/20x/part-00037.parquet",
7093
+ "data/TCGA-UCEC/hibou_l/20x/part-00038.parquet",
7094
+ "data/TCGA-UCEC/hibou_l/20x/part-00039.parquet",
7095
+ "data/TCGA-UCEC/hibou_l/20x/part-00040.parquet",
7096
+ "data/TCGA-UCEC/hibou_l/20x/part-00041.parquet",
7097
+ "data/TCGA-UCEC/hibou_l/20x/part-00042.parquet",
7098
+ "data/TCGA-UCEC/hibou_l/20x/part-00043.parquet",
7099
+ "data/TCGA-UCEC/hibou_l/20x/part-00044.parquet",
7100
+ "data/TCGA-UCEC/hibou_l/20x/part-00045.parquet",
7101
+ "data/TCGA-UCEC/hibou_l/20x/part-00046.parquet",
7102
+ "data/TCGA-UCEC/hibou_l/20x/part-00047.parquet",
7103
+ "data/TCGA-UCEC/hibou_l/20x/part-00048.parquet",
7104
+ "data/TCGA-UCEC/hibou_l/20x/part-00049.parquet"
7105
+ ],
7106
+ "5x": [
7107
+ "data/TCGA-UCEC/hibou_l/5x/part-00000.parquet",
7108
+ "data/TCGA-UCEC/hibou_l/5x/part-00001.parquet",
7109
+ "data/TCGA-UCEC/hibou_l/5x/part-00002.parquet",
7110
+ "data/TCGA-UCEC/hibou_l/5x/part-00003.parquet"
7111
+ ]
7112
+ },
7113
  "titan": {
7114
  "20x": [
7115
  "data/TCGA-UCEC/titan/20x/part-00000.parquet"
 
7321
  "data/TCGA-UCS/gigapath_slide/20x/part-00000.parquet"
7322
  ]
7323
  },
7324
+ "hibou_l": {
7325
+ "10x": [
7326
+ "data/TCGA-UCS/hibou_l/10x/part-00000.parquet",
7327
+ "data/TCGA-UCS/hibou_l/10x/part-00001.parquet",
7328
+ "data/TCGA-UCS/hibou_l/10x/part-00002.parquet"
7329
+ ],
7330
+ "20x": [
7331
+ "data/TCGA-UCS/hibou_l/20x/part-00000.parquet",
7332
+ "data/TCGA-UCS/hibou_l/20x/part-00001.parquet",
7333
+ "data/TCGA-UCS/hibou_l/20x/part-00002.parquet",
7334
+ "data/TCGA-UCS/hibou_l/20x/part-00003.parquet",
7335
+ "data/TCGA-UCS/hibou_l/20x/part-00004.parquet",
7336
+ "data/TCGA-UCS/hibou_l/20x/part-00005.parquet",
7337
+ "data/TCGA-UCS/hibou_l/20x/part-00006.parquet",
7338
+ "data/TCGA-UCS/hibou_l/20x/part-00007.parquet"
7339
+ ],
7340
+ "5x": [
7341
+ "data/TCGA-UCS/hibou_l/5x/part-00000.parquet"
7342
+ ]
7343
+ },
7344
  "titan": {
7345
  "20x": [
7346
  "data/TCGA-UCS/titan/20x/part-00000.parquet"
 
7439
  "data/TCGA-UVM/gigapath_slide/20x/part-00000.parquet"
7440
  ]
7441
  },
7442
+ "hibou_l": {
7443
+ "10x": [
7444
+ "data/TCGA-UVM/hibou_l/10x/part-00000.parquet",
7445
+ "data/TCGA-UVM/hibou_l/10x/part-00001.parquet"
7446
+ ],
7447
+ "20x": [
7448
+ "data/TCGA-UVM/hibou_l/20x/part-00000.parquet",
7449
+ "data/TCGA-UVM/hibou_l/20x/part-00001.parquet",
7450
+ "data/TCGA-UVM/hibou_l/20x/part-00002.parquet",
7451
+ "data/TCGA-UVM/hibou_l/20x/part-00003.parquet",
7452
+ "data/TCGA-UVM/hibou_l/20x/part-00004.parquet"
7453
+ ],
7454
+ "5x": [
7455
+ "data/TCGA-UVM/hibou_l/5x/part-00000.parquet"
7456
+ ]
7457
+ },
7458
  "titan": {
7459
  "20x": [
7460
  "data/TCGA-UVM/titan/20x/part-00000.parquet"
metadata/release.json CHANGED
@@ -1,7 +1,7 @@
1
  {
2
  "schema_version": 1,
3
  "dataset_version": "v0.1.0-tcga-partial",
4
- "created_utc": "2026-09-30T18:36:31.653149+00:00",
5
  "parent_revision": null,
6
  "changed_groups": [
7
  "TCGA-ACC/chief/10x",
@@ -15,6 +15,9 @@
15
  "TCGA-ACC/gigapath/20x",
16
  "TCGA-ACC/gigapath/5x",
17
  "TCGA-ACC/gigapath_slide/20x",
 
 
 
18
  "TCGA-ACC/titan/20x",
19
  "TCGA-ACC/uni_v1/10x",
20
  "TCGA-ACC/uni_v1/20x",
@@ -33,6 +36,9 @@
33
  "TCGA-BLCA/gigapath/20x",
34
  "TCGA-BLCA/gigapath/5x",
35
  "TCGA-BLCA/gigapath_slide/20x",
 
 
 
36
  "TCGA-BLCA/titan/20x",
37
  "TCGA-BLCA/uni_v1/10x",
38
  "TCGA-BLCA/uni_v1/20x",
@@ -51,6 +57,9 @@
51
  "TCGA-BRCA/gigapath/20x",
52
  "TCGA-BRCA/gigapath/5x",
53
  "TCGA-BRCA/gigapath_slide/20x",
 
 
 
54
  "TCGA-BRCA/titan/20x",
55
  "TCGA-BRCA/uni_v1/10x",
56
  "TCGA-BRCA/uni_v1/20x",
@@ -69,6 +78,9 @@
69
  "TCGA-CESC/gigapath/20x",
70
  "TCGA-CESC/gigapath/5x",
71
  "TCGA-CESC/gigapath_slide/20x",
 
 
 
72
  "TCGA-CESC/titan/20x",
73
  "TCGA-CESC/uni_v1/10x",
74
  "TCGA-CESC/uni_v1/20x",
@@ -87,6 +99,9 @@
87
  "TCGA-CHOL/gigapath/20x",
88
  "TCGA-CHOL/gigapath/5x",
89
  "TCGA-CHOL/gigapath_slide/20x",
 
 
 
90
  "TCGA-CHOL/titan/20x",
91
  "TCGA-CHOL/uni_v1/10x",
92
  "TCGA-CHOL/uni_v1/20x",
@@ -105,6 +120,9 @@
105
  "TCGA-COAD/gigapath/20x",
106
  "TCGA-COAD/gigapath/5x",
107
  "TCGA-COAD/gigapath_slide/20x",
 
 
 
108
  "TCGA-COAD/titan/20x",
109
  "TCGA-COAD/uni_v1/10x",
110
  "TCGA-COAD/uni_v1/20x",
@@ -123,6 +141,9 @@
123
  "TCGA-DLBC/gigapath/20x",
124
  "TCGA-DLBC/gigapath/5x",
125
  "TCGA-DLBC/gigapath_slide/20x",
 
 
 
126
  "TCGA-DLBC/titan/20x",
127
  "TCGA-DLBC/uni_v1/10x",
128
  "TCGA-DLBC/uni_v1/20x",
@@ -141,6 +162,9 @@
141
  "TCGA-ESCA/gigapath/20x",
142
  "TCGA-ESCA/gigapath/5x",
143
  "TCGA-ESCA/gigapath_slide/20x",
 
 
 
144
  "TCGA-ESCA/titan/20x",
145
  "TCGA-ESCA/uni_v1/10x",
146
  "TCGA-ESCA/uni_v1/20x",
@@ -159,6 +183,9 @@
159
  "TCGA-GBM/gigapath/20x",
160
  "TCGA-GBM/gigapath/5x",
161
  "TCGA-GBM/gigapath_slide/20x",
 
 
 
162
  "TCGA-GBM/titan/20x",
163
  "TCGA-GBM/uni_v1/10x",
164
  "TCGA-GBM/uni_v1/20x",
@@ -177,6 +204,9 @@
177
  "TCGA-HNSC/gigapath/20x",
178
  "TCGA-HNSC/gigapath/5x",
179
  "TCGA-HNSC/gigapath_slide/20x",
 
 
 
180
  "TCGA-HNSC/titan/20x",
181
  "TCGA-HNSC/uni_v1/10x",
182
  "TCGA-HNSC/uni_v1/20x",
@@ -195,6 +225,9 @@
195
  "TCGA-KICH/gigapath/20x",
196
  "TCGA-KICH/gigapath/5x",
197
  "TCGA-KICH/gigapath_slide/20x",
 
 
 
198
  "TCGA-KICH/titan/20x",
199
  "TCGA-KICH/uni_v1/10x",
200
  "TCGA-KICH/uni_v1/20x",
@@ -213,6 +246,9 @@
213
  "TCGA-KIRC/gigapath/20x",
214
  "TCGA-KIRC/gigapath/5x",
215
  "TCGA-KIRC/gigapath_slide/20x",
 
 
 
216
  "TCGA-KIRC/titan/20x",
217
  "TCGA-KIRC/uni_v1/10x",
218
  "TCGA-KIRC/uni_v1/20x",
@@ -231,6 +267,9 @@
231
  "TCGA-KIRP/gigapath/20x",
232
  "TCGA-KIRP/gigapath/5x",
233
  "TCGA-KIRP/gigapath_slide/20x",
 
 
 
234
  "TCGA-KIRP/titan/20x",
235
  "TCGA-KIRP/uni_v1/10x",
236
  "TCGA-KIRP/uni_v1/20x",
@@ -249,6 +288,9 @@
249
  "TCGA-LGG/gigapath/20x",
250
  "TCGA-LGG/gigapath/5x",
251
  "TCGA-LGG/gigapath_slide/20x",
 
 
 
252
  "TCGA-LGG/titan/20x",
253
  "TCGA-LGG/uni_v1/10x",
254
  "TCGA-LGG/uni_v1/20x",
@@ -267,6 +309,9 @@
267
  "TCGA-LIHC/gigapath/20x",
268
  "TCGA-LIHC/gigapath/5x",
269
  "TCGA-LIHC/gigapath_slide/20x",
 
 
 
270
  "TCGA-LIHC/titan/20x",
271
  "TCGA-LIHC/uni_v1/10x",
272
  "TCGA-LIHC/uni_v1/20x",
@@ -285,6 +330,9 @@
285
  "TCGA-LUAD/gigapath/20x",
286
  "TCGA-LUAD/gigapath/5x",
287
  "TCGA-LUAD/gigapath_slide/20x",
 
 
 
288
  "TCGA-LUAD/titan/20x",
289
  "TCGA-LUAD/uni_v1/10x",
290
  "TCGA-LUAD/uni_v1/20x",
@@ -303,6 +351,9 @@
303
  "TCGA-LUSC/gigapath/20x",
304
  "TCGA-LUSC/gigapath/5x",
305
  "TCGA-LUSC/gigapath_slide/20x",
 
 
 
306
  "TCGA-LUSC/titan/20x",
307
  "TCGA-LUSC/uni_v1/10x",
308
  "TCGA-LUSC/uni_v1/20x",
@@ -321,6 +372,9 @@
321
  "TCGA-MESO/gigapath/20x",
322
  "TCGA-MESO/gigapath/5x",
323
  "TCGA-MESO/gigapath_slide/20x",
 
 
 
324
  "TCGA-MESO/titan/20x",
325
  "TCGA-MESO/uni_v1/10x",
326
  "TCGA-MESO/uni_v1/20x",
@@ -339,6 +393,9 @@
339
  "TCGA-OV/gigapath/20x",
340
  "TCGA-OV/gigapath/5x",
341
  "TCGA-OV/gigapath_slide/20x",
 
 
 
342
  "TCGA-OV/titan/20x",
343
  "TCGA-OV/uni_v1/10x",
344
  "TCGA-OV/uni_v1/20x",
@@ -357,6 +414,9 @@
357
  "TCGA-PAAD/gigapath/20x",
358
  "TCGA-PAAD/gigapath/5x",
359
  "TCGA-PAAD/gigapath_slide/20x",
 
 
 
360
  "TCGA-PAAD/titan/20x",
361
  "TCGA-PAAD/uni_v1/10x",
362
  "TCGA-PAAD/uni_v1/20x",
@@ -375,6 +435,9 @@
375
  "TCGA-PCPG/gigapath/20x",
376
  "TCGA-PCPG/gigapath/5x",
377
  "TCGA-PCPG/gigapath_slide/20x",
 
 
 
378
  "TCGA-PCPG/titan/20x",
379
  "TCGA-PCPG/uni_v1/10x",
380
  "TCGA-PCPG/uni_v1/20x",
@@ -393,6 +456,9 @@
393
  "TCGA-PRAD/gigapath/20x",
394
  "TCGA-PRAD/gigapath/5x",
395
  "TCGA-PRAD/gigapath_slide/20x",
 
 
 
396
  "TCGA-PRAD/titan/20x",
397
  "TCGA-PRAD/uni_v1/10x",
398
  "TCGA-PRAD/uni_v1/20x",
@@ -411,6 +477,9 @@
411
  "TCGA-READ/gigapath/20x",
412
  "TCGA-READ/gigapath/5x",
413
  "TCGA-READ/gigapath_slide/20x",
 
 
 
414
  "TCGA-READ/titan/20x",
415
  "TCGA-READ/uni_v1/10x",
416
  "TCGA-READ/uni_v1/20x",
@@ -429,6 +498,9 @@
429
  "TCGA-SARC/gigapath/20x",
430
  "TCGA-SARC/gigapath/5x",
431
  "TCGA-SARC/gigapath_slide/20x",
 
 
 
432
  "TCGA-SARC/titan/20x",
433
  "TCGA-SARC/uni_v1/10x",
434
  "TCGA-SARC/uni_v1/20x",
@@ -447,6 +519,9 @@
447
  "TCGA-SKCM/gigapath/20x",
448
  "TCGA-SKCM/gigapath/5x",
449
  "TCGA-SKCM/gigapath_slide/20x",
 
 
 
450
  "TCGA-SKCM/titan/20x",
451
  "TCGA-SKCM/uni_v1/10x",
452
  "TCGA-SKCM/uni_v1/20x",
@@ -465,6 +540,9 @@
465
  "TCGA-STAD/gigapath/20x",
466
  "TCGA-STAD/gigapath/5x",
467
  "TCGA-STAD/gigapath_slide/20x",
 
 
 
468
  "TCGA-STAD/titan/20x",
469
  "TCGA-STAD/uni_v1/10x",
470
  "TCGA-STAD/uni_v1/20x",
@@ -482,6 +560,9 @@
482
  "TCGA-TGCT/gigapath/20x",
483
  "TCGA-TGCT/gigapath/5x",
484
  "TCGA-TGCT/gigapath_slide/20x",
 
 
 
485
  "TCGA-TGCT/titan/20x",
486
  "TCGA-TGCT/uni_v1/10x",
487
  "TCGA-TGCT/uni_v1/20x",
@@ -500,6 +581,9 @@
500
  "TCGA-THCA/gigapath/20x",
501
  "TCGA-THCA/gigapath/5x",
502
  "TCGA-THCA/gigapath_slide/20x",
 
 
 
503
  "TCGA-THCA/titan/20x",
504
  "TCGA-THCA/uni_v1/10x",
505
  "TCGA-THCA/uni_v1/20x",
@@ -518,6 +602,9 @@
518
  "TCGA-THYM/gigapath/20x",
519
  "TCGA-THYM/gigapath/5x",
520
  "TCGA-THYM/gigapath_slide/20x",
 
 
 
521
  "TCGA-THYM/titan/20x",
522
  "TCGA-THYM/uni_v1/10x",
523
  "TCGA-THYM/uni_v1/20x",
@@ -536,6 +623,9 @@
536
  "TCGA-UCEC/gigapath/20x",
537
  "TCGA-UCEC/gigapath/5x",
538
  "TCGA-UCEC/gigapath_slide/20x",
 
 
 
539
  "TCGA-UCEC/titan/20x",
540
  "TCGA-UCEC/uni_v1/10x",
541
  "TCGA-UCEC/uni_v1/20x",
@@ -554,6 +644,9 @@
554
  "TCGA-UCS/gigapath/20x",
555
  "TCGA-UCS/gigapath/5x",
556
  "TCGA-UCS/gigapath_slide/20x",
 
 
 
557
  "TCGA-UCS/titan/20x",
558
  "TCGA-UCS/uni_v1/10x",
559
  "TCGA-UCS/uni_v1/20x",
@@ -572,6 +665,9 @@
572
  "TCGA-UVM/gigapath/20x",
573
  "TCGA-UVM/gigapath/5x",
574
  "TCGA-UVM/gigapath_slide/20x",
 
 
 
575
  "TCGA-UVM/titan/20x",
576
  "TCGA-UVM/uni_v1/10x",
577
  "TCGA-UVM/uni_v1/20x",
@@ -580,7 +676,7 @@
580
  "TCGA-UVM/uni_v2/20x",
581
  "TCGA-UVM/uni_v2/5x"
582
  ],
583
- "commit_message": "Upload TCGA partial batch: chief, conch_v1, ctranspath, gigapath_slide, titan, uni_v1, uni_v2, gigapath",
584
  "builder_run_id": null,
585
  "source_hashes": {
586
  "location": "metadata/h5_validation.parquet",
 
1
  {
2
  "schema_version": 1,
3
  "dataset_version": "v0.1.0-tcga-partial",
4
+ "created_utc": "2026-10-27T00:40:29.066372+00:00",
5
  "parent_revision": null,
6
  "changed_groups": [
7
  "TCGA-ACC/chief/10x",
 
15
  "TCGA-ACC/gigapath/20x",
16
  "TCGA-ACC/gigapath/5x",
17
  "TCGA-ACC/gigapath_slide/20x",
18
+ "TCGA-ACC/hibou_l/10x",
19
+ "TCGA-ACC/hibou_l/20x",
20
+ "TCGA-ACC/hibou_l/5x",
21
  "TCGA-ACC/titan/20x",
22
  "TCGA-ACC/uni_v1/10x",
23
  "TCGA-ACC/uni_v1/20x",
 
36
  "TCGA-BLCA/gigapath/20x",
37
  "TCGA-BLCA/gigapath/5x",
38
  "TCGA-BLCA/gigapath_slide/20x",
39
+ "TCGA-BLCA/hibou_l/10x",
40
+ "TCGA-BLCA/hibou_l/20x",
41
+ "TCGA-BLCA/hibou_l/5x",
42
  "TCGA-BLCA/titan/20x",
43
  "TCGA-BLCA/uni_v1/10x",
44
  "TCGA-BLCA/uni_v1/20x",
 
57
  "TCGA-BRCA/gigapath/20x",
58
  "TCGA-BRCA/gigapath/5x",
59
  "TCGA-BRCA/gigapath_slide/20x",
60
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61
+ "TCGA-BRCA/hibou_l/20x",
62
+ "TCGA-BRCA/hibou_l/5x",
63
  "TCGA-BRCA/titan/20x",
64
  "TCGA-BRCA/uni_v1/10x",
65
  "TCGA-BRCA/uni_v1/20x",
 
78
  "TCGA-CESC/gigapath/20x",
79
  "TCGA-CESC/gigapath/5x",
80
  "TCGA-CESC/gigapath_slide/20x",
81
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82
+ "TCGA-CESC/hibou_l/20x",
83
+ "TCGA-CESC/hibou_l/5x",
84
  "TCGA-CESC/titan/20x",
85
  "TCGA-CESC/uni_v1/10x",
86
  "TCGA-CESC/uni_v1/20x",
 
99
  "TCGA-CHOL/gigapath/20x",
100
  "TCGA-CHOL/gigapath/5x",
101
  "TCGA-CHOL/gigapath_slide/20x",
102
+ "TCGA-CHOL/hibou_l/10x",
103
+ "TCGA-CHOL/hibou_l/20x",
104
+ "TCGA-CHOL/hibou_l/5x",
105
  "TCGA-CHOL/titan/20x",
106
  "TCGA-CHOL/uni_v1/10x",
107
  "TCGA-CHOL/uni_v1/20x",
 
120
  "TCGA-COAD/gigapath/20x",
121
  "TCGA-COAD/gigapath/5x",
122
  "TCGA-COAD/gigapath_slide/20x",
123
+ "TCGA-COAD/hibou_l/10x",
124
+ "TCGA-COAD/hibou_l/20x",
125
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126
  "TCGA-COAD/titan/20x",
127
  "TCGA-COAD/uni_v1/10x",
128
  "TCGA-COAD/uni_v1/20x",
 
141
  "TCGA-DLBC/gigapath/20x",
142
  "TCGA-DLBC/gigapath/5x",
143
  "TCGA-DLBC/gigapath_slide/20x",
144
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145
+ "TCGA-DLBC/hibou_l/20x",
146
+ "TCGA-DLBC/hibou_l/5x",
147
  "TCGA-DLBC/titan/20x",
148
  "TCGA-DLBC/uni_v1/10x",
149
  "TCGA-DLBC/uni_v1/20x",
 
162
  "TCGA-ESCA/gigapath/20x",
163
  "TCGA-ESCA/gigapath/5x",
164
  "TCGA-ESCA/gigapath_slide/20x",
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166
+ "TCGA-ESCA/hibou_l/20x",
167
+ "TCGA-ESCA/hibou_l/5x",
168
  "TCGA-ESCA/titan/20x",
169
  "TCGA-ESCA/uni_v1/10x",
170
  "TCGA-ESCA/uni_v1/20x",
 
183
  "TCGA-GBM/gigapath/20x",
184
  "TCGA-GBM/gigapath/5x",
185
  "TCGA-GBM/gigapath_slide/20x",
186
+ "TCGA-GBM/hibou_l/10x",
187
+ "TCGA-GBM/hibou_l/20x",
188
+ "TCGA-GBM/hibou_l/5x",
189
  "TCGA-GBM/titan/20x",
190
  "TCGA-GBM/uni_v1/10x",
191
  "TCGA-GBM/uni_v1/20x",
 
204
  "TCGA-HNSC/gigapath/20x",
205
  "TCGA-HNSC/gigapath/5x",
206
  "TCGA-HNSC/gigapath_slide/20x",
207
+ "TCGA-HNSC/hibou_l/10x",
208
+ "TCGA-HNSC/hibou_l/20x",
209
+ "TCGA-HNSC/hibou_l/5x",
210
  "TCGA-HNSC/titan/20x",
211
  "TCGA-HNSC/uni_v1/10x",
212
  "TCGA-HNSC/uni_v1/20x",
 
225
  "TCGA-KICH/gigapath/20x",
226
  "TCGA-KICH/gigapath/5x",
227
  "TCGA-KICH/gigapath_slide/20x",
228
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229
+ "TCGA-KICH/hibou_l/20x",
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+ "TCGA-KICH/hibou_l/5x",
231
  "TCGA-KICH/titan/20x",
232
  "TCGA-KICH/uni_v1/10x",
233
  "TCGA-KICH/uni_v1/20x",
 
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  "TCGA-KIRC/gigapath/20x",
247
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248
  "TCGA-KIRC/gigapath_slide/20x",
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  "TCGA-KIRC/titan/20x",
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  "TCGA-KIRC/uni_v1/10x",
254
  "TCGA-KIRC/uni_v1/20x",
 
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  "TCGA-KIRP/gigapath/20x",
268
  "TCGA-KIRP/gigapath/5x",
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  "TCGA-KIRP/gigapath_slide/20x",
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+ "TCGA-KIRP/hibou_l/20x",
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+ "TCGA-KIRP/hibou_l/5x",
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  "TCGA-KIRP/titan/20x",
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  "TCGA-KIRP/uni_v1/10x",
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  "TCGA-LGG/gigapath/20x",
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  "TCGA-LGG/gigapath/5x",
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  "TCGA-LGG/gigapath_slide/20x",
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+ "TCGA-LGG/hibou_l/20x",
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  "TCGA-LIHC/gigapath/20x",
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  "TCGA-MESO/gigapath/20x",
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  "TCGA-READ/gigapath/20x",
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  "TCGA-SKCM/gigapath/20x",
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  "TCGA-SKCM/uni_v1/20x",
 
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  "TCGA-STAD/gigapath/20x",
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  "TCGA-STAD/gigapath/5x",
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  "TCGA-STAD/gigapath_slide/20x",
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  "TCGA-STAD/titan/20x",
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  "TCGA-STAD/uni_v1/20x",
 
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  "TCGA-TGCT/gigapath/20x",
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+ "TCGA-TGCT/hibou_l/5x",
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  "TCGA-TGCT/titan/20x",
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  "TCGA-TGCT/uni_v1/10x",
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  "TCGA-TGCT/uni_v1/20x",
 
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  "TCGA-THCA/gigapath/20x",
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  "TCGA-THCA/gigapath/5x",
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  "TCGA-THCA/titan/20x",
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  "TCGA-THCA/uni_v1/20x",
 
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  "TCGA-THYM/gigapath/20x",
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  "TCGA-THYM/gigapath_slide/20x",
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+ "TCGA-THYM/hibou_l/20x",
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+ "TCGA-THYM/hibou_l/5x",
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  "TCGA-THYM/uni_v1/10x",
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  "TCGA-THYM/uni_v1/20x",
 
623
  "TCGA-UCEC/gigapath/20x",
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  "TCGA-UCEC/gigapath/5x",
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  "TCGA-UCEC/gigapath_slide/20x",
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+ "TCGA-UCEC/hibou_l/20x",
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  "TCGA-UCEC/titan/20x",
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  "TCGA-UCEC/uni_v1/10x",
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  "TCGA-UCEC/uni_v1/20x",
 
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  "TCGA-UCS/gigapath/20x",
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  "TCGA-UCS/gigapath_slide/20x",
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+ "TCGA-UCS/hibou_l/20x",
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  "TCGA-UCS/titan/20x",
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  "TCGA-UCS/uni_v1/10x",
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  "TCGA-UCS/uni_v1/20x",
 
665
  "TCGA-UVM/gigapath/20x",
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  "TCGA-UVM/gigapath_slide/20x",
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17058
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17059
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