Record verified TCGA hoptimus0 branch integration
Browse filesUpdate cumulative upload ledger and dataset card after branch integration job 8754280.
- README.md +198 -6
- metadata/h5_validation.parquet +2 -2
- metadata/nested_index.json +0 -0
- metadata/release.json +95 -2
- metadata/shard_manifest.parquet +2 -2
- metadata/slide_registry.parquet +2 -2
- metadata/upload_status.json +596 -483
README.md
CHANGED
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@@ -922,6 +922,198 @@ configs:
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| 922 |
path: data/TCGA-UCS/hibou_l/5x/*.parquet
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| 923 |
- split: TCGA_UVM
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| 924 |
path: data/TCGA-UVM/hibou_l/5x/*.parquet
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| 925 |
- config_name: titan_20x
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| 926 |
data_files:
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| 927 |
- split: TCGA_ACC
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@@ -1398,12 +1590,12 @@ data/{project_id}/{model_name}/{magnification}/part-*.parquet
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| 1398 |
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| 1399 |
## Included release scope
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| 1400 |
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| 1401 |
-
- Models: chief, conch_v1, ctranspath, gigapath, gigapath_slide, hibou_l, titan, uni_v1, uni_v2
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| 1402 |
-
- Groups:
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| 1403 |
-
- Shards:
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| 1404 |
-
- Embedding rows:
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| 1405 |
-
- Registry rows:
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| 1406 |
-
- H5 validation rows:
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| 1407 |
- H5 validation failures: 0
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| 1408 |
|
| 1409 |
Each row is a chunk of patch or slide embeddings from one TCGA slide.
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| 922 |
path: data/TCGA-UCS/hibou_l/5x/*.parquet
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| 923 |
- split: TCGA_UVM
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| 924 |
path: data/TCGA-UVM/hibou_l/5x/*.parquet
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| 925 |
+
- config_name: hoptimus0_10x
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| 926 |
+
data_files:
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| 927 |
+
- split: TCGA_ACC
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| 928 |
+
path: data/TCGA-ACC/hoptimus0/10x/*.parquet
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| 929 |
+
- split: TCGA_BLCA
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| 930 |
+
path: data/TCGA-BLCA/hoptimus0/10x/*.parquet
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| 931 |
+
- split: TCGA_BRCA
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| 932 |
+
path: data/TCGA-BRCA/hoptimus0/10x/*.parquet
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| 933 |
+
- split: TCGA_CESC
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| 934 |
+
path: data/TCGA-CESC/hoptimus0/10x/*.parquet
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| 935 |
+
- split: TCGA_CHOL
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| 936 |
+
path: data/TCGA-CHOL/hoptimus0/10x/*.parquet
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| 937 |
+
- split: TCGA_COAD
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| 938 |
+
path: data/TCGA-COAD/hoptimus0/10x/*.parquet
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| 939 |
+
- split: TCGA_DLBC
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| 940 |
+
path: data/TCGA-DLBC/hoptimus0/10x/*.parquet
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| 941 |
+
- split: TCGA_ESCA
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| 942 |
+
path: data/TCGA-ESCA/hoptimus0/10x/*.parquet
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| 943 |
+
- split: TCGA_GBM
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| 944 |
+
path: data/TCGA-GBM/hoptimus0/10x/*.parquet
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| 945 |
+
- split: TCGA_HNSC
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| 946 |
+
path: data/TCGA-HNSC/hoptimus0/10x/*.parquet
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| 947 |
+
- split: TCGA_KICH
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| 948 |
+
path: data/TCGA-KICH/hoptimus0/10x/*.parquet
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| 949 |
+
- split: TCGA_KIRC
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| 950 |
+
path: data/TCGA-KIRC/hoptimus0/10x/*.parquet
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| 951 |
+
- split: TCGA_KIRP
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| 952 |
+
path: data/TCGA-KIRP/hoptimus0/10x/*.parquet
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| 953 |
+
- split: TCGA_LGG
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| 954 |
+
path: data/TCGA-LGG/hoptimus0/10x/*.parquet
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| 955 |
+
- split: TCGA_LIHC
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| 956 |
+
path: data/TCGA-LIHC/hoptimus0/10x/*.parquet
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| 957 |
+
- split: TCGA_LUAD
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| 958 |
+
path: data/TCGA-LUAD/hoptimus0/10x/*.parquet
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| 959 |
+
- split: TCGA_LUSC
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| 960 |
+
path: data/TCGA-LUSC/hoptimus0/10x/*.parquet
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| 961 |
+
- split: TCGA_MESO
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| 962 |
+
path: data/TCGA-MESO/hoptimus0/10x/*.parquet
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| 963 |
+
- split: TCGA_OV
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| 964 |
+
path: data/TCGA-OV/hoptimus0/10x/*.parquet
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| 965 |
+
- split: TCGA_PAAD
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| 966 |
+
path: data/TCGA-PAAD/hoptimus0/10x/*.parquet
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| 967 |
+
- split: TCGA_PCPG
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| 968 |
+
path: data/TCGA-PCPG/hoptimus0/10x/*.parquet
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| 969 |
+
- split: TCGA_PRAD
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| 970 |
+
path: data/TCGA-PRAD/hoptimus0/10x/*.parquet
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| 971 |
+
- split: TCGA_READ
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| 972 |
+
path: data/TCGA-READ/hoptimus0/10x/*.parquet
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| 973 |
+
- split: TCGA_SARC
|
| 974 |
+
path: data/TCGA-SARC/hoptimus0/10x/*.parquet
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| 975 |
+
- split: TCGA_SKCM
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| 976 |
+
path: data/TCGA-SKCM/hoptimus0/10x/*.parquet
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| 977 |
+
- split: TCGA_STAD
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| 978 |
+
path: data/TCGA-STAD/hoptimus0/10x/*.parquet
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| 979 |
+
- split: TCGA_THCA
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| 980 |
+
path: data/TCGA-THCA/hoptimus0/10x/*.parquet
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| 981 |
+
- split: TCGA_THYM
|
| 982 |
+
path: data/TCGA-THYM/hoptimus0/10x/*.parquet
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| 983 |
+
- split: TCGA_UCEC
|
| 984 |
+
path: data/TCGA-UCEC/hoptimus0/10x/*.parquet
|
| 985 |
+
- split: TCGA_UCS
|
| 986 |
+
path: data/TCGA-UCS/hoptimus0/10x/*.parquet
|
| 987 |
+
- split: TCGA_UVM
|
| 988 |
+
path: data/TCGA-UVM/hoptimus0/10x/*.parquet
|
| 989 |
+
- config_name: hoptimus0_20x
|
| 990 |
+
data_files:
|
| 991 |
+
- split: TCGA_ACC
|
| 992 |
+
path: data/TCGA-ACC/hoptimus0/20x/*.parquet
|
| 993 |
+
- split: TCGA_BLCA
|
| 994 |
+
path: data/TCGA-BLCA/hoptimus0/20x/*.parquet
|
| 995 |
+
- split: TCGA_BRCA
|
| 996 |
+
path: data/TCGA-BRCA/hoptimus0/20x/*.parquet
|
| 997 |
+
- split: TCGA_CESC
|
| 998 |
+
path: data/TCGA-CESC/hoptimus0/20x/*.parquet
|
| 999 |
+
- split: TCGA_CHOL
|
| 1000 |
+
path: data/TCGA-CHOL/hoptimus0/20x/*.parquet
|
| 1001 |
+
- split: TCGA_COAD
|
| 1002 |
+
path: data/TCGA-COAD/hoptimus0/20x/*.parquet
|
| 1003 |
+
- split: TCGA_DLBC
|
| 1004 |
+
path: data/TCGA-DLBC/hoptimus0/20x/*.parquet
|
| 1005 |
+
- split: TCGA_ESCA
|
| 1006 |
+
path: data/TCGA-ESCA/hoptimus0/20x/*.parquet
|
| 1007 |
+
- split: TCGA_GBM
|
| 1008 |
+
path: data/TCGA-GBM/hoptimus0/20x/*.parquet
|
| 1009 |
+
- split: TCGA_HNSC
|
| 1010 |
+
path: data/TCGA-HNSC/hoptimus0/20x/*.parquet
|
| 1011 |
+
- split: TCGA_KICH
|
| 1012 |
+
path: data/TCGA-KICH/hoptimus0/20x/*.parquet
|
| 1013 |
+
- split: TCGA_KIRC
|
| 1014 |
+
path: data/TCGA-KIRC/hoptimus0/20x/*.parquet
|
| 1015 |
+
- split: TCGA_KIRP
|
| 1016 |
+
path: data/TCGA-KIRP/hoptimus0/20x/*.parquet
|
| 1017 |
+
- split: TCGA_LGG
|
| 1018 |
+
path: data/TCGA-LGG/hoptimus0/20x/*.parquet
|
| 1019 |
+
- split: TCGA_LIHC
|
| 1020 |
+
path: data/TCGA-LIHC/hoptimus0/20x/*.parquet
|
| 1021 |
+
- split: TCGA_LUAD
|
| 1022 |
+
path: data/TCGA-LUAD/hoptimus0/20x/*.parquet
|
| 1023 |
+
- split: TCGA_LUSC
|
| 1024 |
+
path: data/TCGA-LUSC/hoptimus0/20x/*.parquet
|
| 1025 |
+
- split: TCGA_MESO
|
| 1026 |
+
path: data/TCGA-MESO/hoptimus0/20x/*.parquet
|
| 1027 |
+
- split: TCGA_OV
|
| 1028 |
+
path: data/TCGA-OV/hoptimus0/20x/*.parquet
|
| 1029 |
+
- split: TCGA_PAAD
|
| 1030 |
+
path: data/TCGA-PAAD/hoptimus0/20x/*.parquet
|
| 1031 |
+
- split: TCGA_PCPG
|
| 1032 |
+
path: data/TCGA-PCPG/hoptimus0/20x/*.parquet
|
| 1033 |
+
- split: TCGA_PRAD
|
| 1034 |
+
path: data/TCGA-PRAD/hoptimus0/20x/*.parquet
|
| 1035 |
+
- split: TCGA_READ
|
| 1036 |
+
path: data/TCGA-READ/hoptimus0/20x/*.parquet
|
| 1037 |
+
- split: TCGA_SARC
|
| 1038 |
+
path: data/TCGA-SARC/hoptimus0/20x/*.parquet
|
| 1039 |
+
- split: TCGA_SKCM
|
| 1040 |
+
path: data/TCGA-SKCM/hoptimus0/20x/*.parquet
|
| 1041 |
+
- split: TCGA_STAD
|
| 1042 |
+
path: data/TCGA-STAD/hoptimus0/20x/*.parquet
|
| 1043 |
+
- split: TCGA_THCA
|
| 1044 |
+
path: data/TCGA-THCA/hoptimus0/20x/*.parquet
|
| 1045 |
+
- split: TCGA_THYM
|
| 1046 |
+
path: data/TCGA-THYM/hoptimus0/20x/*.parquet
|
| 1047 |
+
- split: TCGA_UCEC
|
| 1048 |
+
path: data/TCGA-UCEC/hoptimus0/20x/*.parquet
|
| 1049 |
+
- split: TCGA_UCS
|
| 1050 |
+
path: data/TCGA-UCS/hoptimus0/20x/*.parquet
|
| 1051 |
+
- split: TCGA_UVM
|
| 1052 |
+
path: data/TCGA-UVM/hoptimus0/20x/*.parquet
|
| 1053 |
+
- config_name: hoptimus0_5x
|
| 1054 |
+
data_files:
|
| 1055 |
+
- split: TCGA_ACC
|
| 1056 |
+
path: data/TCGA-ACC/hoptimus0/5x/*.parquet
|
| 1057 |
+
- split: TCGA_BLCA
|
| 1058 |
+
path: data/TCGA-BLCA/hoptimus0/5x/*.parquet
|
| 1059 |
+
- split: TCGA_BRCA
|
| 1060 |
+
path: data/TCGA-BRCA/hoptimus0/5x/*.parquet
|
| 1061 |
+
- split: TCGA_CESC
|
| 1062 |
+
path: data/TCGA-CESC/hoptimus0/5x/*.parquet
|
| 1063 |
+
- split: TCGA_CHOL
|
| 1064 |
+
path: data/TCGA-CHOL/hoptimus0/5x/*.parquet
|
| 1065 |
+
- split: TCGA_COAD
|
| 1066 |
+
path: data/TCGA-COAD/hoptimus0/5x/*.parquet
|
| 1067 |
+
- split: TCGA_DLBC
|
| 1068 |
+
path: data/TCGA-DLBC/hoptimus0/5x/*.parquet
|
| 1069 |
+
- split: TCGA_ESCA
|
| 1070 |
+
path: data/TCGA-ESCA/hoptimus0/5x/*.parquet
|
| 1071 |
+
- split: TCGA_GBM
|
| 1072 |
+
path: data/TCGA-GBM/hoptimus0/5x/*.parquet
|
| 1073 |
+
- split: TCGA_HNSC
|
| 1074 |
+
path: data/TCGA-HNSC/hoptimus0/5x/*.parquet
|
| 1075 |
+
- split: TCGA_KICH
|
| 1076 |
+
path: data/TCGA-KICH/hoptimus0/5x/*.parquet
|
| 1077 |
+
- split: TCGA_KIRC
|
| 1078 |
+
path: data/TCGA-KIRC/hoptimus0/5x/*.parquet
|
| 1079 |
+
- split: TCGA_KIRP
|
| 1080 |
+
path: data/TCGA-KIRP/hoptimus0/5x/*.parquet
|
| 1081 |
+
- split: TCGA_LGG
|
| 1082 |
+
path: data/TCGA-LGG/hoptimus0/5x/*.parquet
|
| 1083 |
+
- split: TCGA_LIHC
|
| 1084 |
+
path: data/TCGA-LIHC/hoptimus0/5x/*.parquet
|
| 1085 |
+
- split: TCGA_LUAD
|
| 1086 |
+
path: data/TCGA-LUAD/hoptimus0/5x/*.parquet
|
| 1087 |
+
- split: TCGA_LUSC
|
| 1088 |
+
path: data/TCGA-LUSC/hoptimus0/5x/*.parquet
|
| 1089 |
+
- split: TCGA_MESO
|
| 1090 |
+
path: data/TCGA-MESO/hoptimus0/5x/*.parquet
|
| 1091 |
+
- split: TCGA_OV
|
| 1092 |
+
path: data/TCGA-OV/hoptimus0/5x/*.parquet
|
| 1093 |
+
- split: TCGA_PAAD
|
| 1094 |
+
path: data/TCGA-PAAD/hoptimus0/5x/*.parquet
|
| 1095 |
+
- split: TCGA_PCPG
|
| 1096 |
+
path: data/TCGA-PCPG/hoptimus0/5x/*.parquet
|
| 1097 |
+
- split: TCGA_PRAD
|
| 1098 |
+
path: data/TCGA-PRAD/hoptimus0/5x/*.parquet
|
| 1099 |
+
- split: TCGA_READ
|
| 1100 |
+
path: data/TCGA-READ/hoptimus0/5x/*.parquet
|
| 1101 |
+
- split: TCGA_SARC
|
| 1102 |
+
path: data/TCGA-SARC/hoptimus0/5x/*.parquet
|
| 1103 |
+
- split: TCGA_SKCM
|
| 1104 |
+
path: data/TCGA-SKCM/hoptimus0/5x/*.parquet
|
| 1105 |
+
- split: TCGA_STAD
|
| 1106 |
+
path: data/TCGA-STAD/hoptimus0/5x/*.parquet
|
| 1107 |
+
- split: TCGA_THCA
|
| 1108 |
+
path: data/TCGA-THCA/hoptimus0/5x/*.parquet
|
| 1109 |
+
- split: TCGA_THYM
|
| 1110 |
+
path: data/TCGA-THYM/hoptimus0/5x/*.parquet
|
| 1111 |
+
- split: TCGA_UCEC
|
| 1112 |
+
path: data/TCGA-UCEC/hoptimus0/5x/*.parquet
|
| 1113 |
+
- split: TCGA_UCS
|
| 1114 |
+
path: data/TCGA-UCS/hoptimus0/5x/*.parquet
|
| 1115 |
+
- split: TCGA_UVM
|
| 1116 |
+
path: data/TCGA-UVM/hoptimus0/5x/*.parquet
|
| 1117 |
- config_name: titan_20x
|
| 1118 |
data_files:
|
| 1119 |
- split: TCGA_ACC
|
|
|
|
| 1590 |
|
| 1591 |
## Included release scope
|
| 1592 |
|
| 1593 |
+
- Models: chief, conch_v1, ctranspath, gigapath, gigapath_slide, hibou_l, hoptimus0, titan, uni_v1, uni_v2
|
| 1594 |
+
- Groups: 764
|
| 1595 |
+
- Shards: 7,125
|
| 1596 |
+
- Embedding rows: 5,922,587
|
| 1597 |
+
- Registry rows: 279,001
|
| 1598 |
+
- H5 validation rows: 279,001
|
| 1599 |
- H5 validation failures: 0
|
| 1600 |
|
| 1601 |
Each row is a chunk of patch or slide embeddings from one TCGA slide.
|
metadata/h5_validation.parquet
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
-
size
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:81d7802bb8165ccdae3135102822d1732b064b5ba91d102b36721208bfa37e1b
|
| 3 |
+
size 19637120
|
metadata/nested_index.json
CHANGED
|
The diff for this file is too large to render.
See raw diff
|
|
|
metadata/release.json
CHANGED
|
@@ -1,7 +1,7 @@
|
|
| 1 |
{
|
| 2 |
"schema_version": 1,
|
| 3 |
"dataset_version": "v0.1.0-tcga-partial",
|
| 4 |
-
"created_utc": "2026-10-
|
| 5 |
"parent_revision": null,
|
| 6 |
"changed_groups": [
|
| 7 |
"TCGA-ACC/chief/10x",
|
|
@@ -18,6 +18,9 @@
|
|
| 18 |
"TCGA-ACC/hibou_l/10x",
|
| 19 |
"TCGA-ACC/hibou_l/20x",
|
| 20 |
"TCGA-ACC/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 21 |
"TCGA-ACC/titan/20x",
|
| 22 |
"TCGA-ACC/uni_v1/10x",
|
| 23 |
"TCGA-ACC/uni_v1/20x",
|
|
@@ -39,6 +42,9 @@
|
|
| 39 |
"TCGA-BLCA/hibou_l/10x",
|
| 40 |
"TCGA-BLCA/hibou_l/20x",
|
| 41 |
"TCGA-BLCA/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 42 |
"TCGA-BLCA/titan/20x",
|
| 43 |
"TCGA-BLCA/uni_v1/10x",
|
| 44 |
"TCGA-BLCA/uni_v1/20x",
|
|
@@ -60,6 +66,9 @@
|
|
| 60 |
"TCGA-BRCA/hibou_l/10x",
|
| 61 |
"TCGA-BRCA/hibou_l/20x",
|
| 62 |
"TCGA-BRCA/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 63 |
"TCGA-BRCA/titan/20x",
|
| 64 |
"TCGA-BRCA/uni_v1/10x",
|
| 65 |
"TCGA-BRCA/uni_v1/20x",
|
|
@@ -81,6 +90,9 @@
|
|
| 81 |
"TCGA-CESC/hibou_l/10x",
|
| 82 |
"TCGA-CESC/hibou_l/20x",
|
| 83 |
"TCGA-CESC/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 84 |
"TCGA-CESC/titan/20x",
|
| 85 |
"TCGA-CESC/uni_v1/10x",
|
| 86 |
"TCGA-CESC/uni_v1/20x",
|
|
@@ -102,6 +114,9 @@
|
|
| 102 |
"TCGA-CHOL/hibou_l/10x",
|
| 103 |
"TCGA-CHOL/hibou_l/20x",
|
| 104 |
"TCGA-CHOL/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 105 |
"TCGA-CHOL/titan/20x",
|
| 106 |
"TCGA-CHOL/uni_v1/10x",
|
| 107 |
"TCGA-CHOL/uni_v1/20x",
|
|
@@ -123,6 +138,9 @@
|
|
| 123 |
"TCGA-COAD/hibou_l/10x",
|
| 124 |
"TCGA-COAD/hibou_l/20x",
|
| 125 |
"TCGA-COAD/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 126 |
"TCGA-COAD/titan/20x",
|
| 127 |
"TCGA-COAD/uni_v1/10x",
|
| 128 |
"TCGA-COAD/uni_v1/20x",
|
|
@@ -144,6 +162,9 @@
|
|
| 144 |
"TCGA-DLBC/hibou_l/10x",
|
| 145 |
"TCGA-DLBC/hibou_l/20x",
|
| 146 |
"TCGA-DLBC/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 147 |
"TCGA-DLBC/titan/20x",
|
| 148 |
"TCGA-DLBC/uni_v1/10x",
|
| 149 |
"TCGA-DLBC/uni_v1/20x",
|
|
@@ -165,6 +186,9 @@
|
|
| 165 |
"TCGA-ESCA/hibou_l/10x",
|
| 166 |
"TCGA-ESCA/hibou_l/20x",
|
| 167 |
"TCGA-ESCA/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 168 |
"TCGA-ESCA/titan/20x",
|
| 169 |
"TCGA-ESCA/uni_v1/10x",
|
| 170 |
"TCGA-ESCA/uni_v1/20x",
|
|
@@ -186,6 +210,9 @@
|
|
| 186 |
"TCGA-GBM/hibou_l/10x",
|
| 187 |
"TCGA-GBM/hibou_l/20x",
|
| 188 |
"TCGA-GBM/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 189 |
"TCGA-GBM/titan/20x",
|
| 190 |
"TCGA-GBM/uni_v1/10x",
|
| 191 |
"TCGA-GBM/uni_v1/20x",
|
|
@@ -207,6 +234,9 @@
|
|
| 207 |
"TCGA-HNSC/hibou_l/10x",
|
| 208 |
"TCGA-HNSC/hibou_l/20x",
|
| 209 |
"TCGA-HNSC/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 210 |
"TCGA-HNSC/titan/20x",
|
| 211 |
"TCGA-HNSC/uni_v1/10x",
|
| 212 |
"TCGA-HNSC/uni_v1/20x",
|
|
@@ -228,6 +258,9 @@
|
|
| 228 |
"TCGA-KICH/hibou_l/10x",
|
| 229 |
"TCGA-KICH/hibou_l/20x",
|
| 230 |
"TCGA-KICH/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 231 |
"TCGA-KICH/titan/20x",
|
| 232 |
"TCGA-KICH/uni_v1/10x",
|
| 233 |
"TCGA-KICH/uni_v1/20x",
|
|
@@ -249,6 +282,9 @@
|
|
| 249 |
"TCGA-KIRC/hibou_l/10x",
|
| 250 |
"TCGA-KIRC/hibou_l/20x",
|
| 251 |
"TCGA-KIRC/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 252 |
"TCGA-KIRC/titan/20x",
|
| 253 |
"TCGA-KIRC/uni_v1/10x",
|
| 254 |
"TCGA-KIRC/uni_v1/20x",
|
|
@@ -270,6 +306,9 @@
|
|
| 270 |
"TCGA-KIRP/hibou_l/10x",
|
| 271 |
"TCGA-KIRP/hibou_l/20x",
|
| 272 |
"TCGA-KIRP/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 273 |
"TCGA-KIRP/titan/20x",
|
| 274 |
"TCGA-KIRP/uni_v1/10x",
|
| 275 |
"TCGA-KIRP/uni_v1/20x",
|
|
@@ -291,6 +330,9 @@
|
|
| 291 |
"TCGA-LGG/hibou_l/10x",
|
| 292 |
"TCGA-LGG/hibou_l/20x",
|
| 293 |
"TCGA-LGG/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 294 |
"TCGA-LGG/titan/20x",
|
| 295 |
"TCGA-LGG/uni_v1/10x",
|
| 296 |
"TCGA-LGG/uni_v1/20x",
|
|
@@ -312,6 +354,9 @@
|
|
| 312 |
"TCGA-LIHC/hibou_l/10x",
|
| 313 |
"TCGA-LIHC/hibou_l/20x",
|
| 314 |
"TCGA-LIHC/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 315 |
"TCGA-LIHC/titan/20x",
|
| 316 |
"TCGA-LIHC/uni_v1/10x",
|
| 317 |
"TCGA-LIHC/uni_v1/20x",
|
|
@@ -333,6 +378,9 @@
|
|
| 333 |
"TCGA-LUAD/hibou_l/10x",
|
| 334 |
"TCGA-LUAD/hibou_l/20x",
|
| 335 |
"TCGA-LUAD/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 336 |
"TCGA-LUAD/titan/20x",
|
| 337 |
"TCGA-LUAD/uni_v1/10x",
|
| 338 |
"TCGA-LUAD/uni_v1/20x",
|
|
@@ -354,6 +402,9 @@
|
|
| 354 |
"TCGA-LUSC/hibou_l/10x",
|
| 355 |
"TCGA-LUSC/hibou_l/20x",
|
| 356 |
"TCGA-LUSC/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 357 |
"TCGA-LUSC/titan/20x",
|
| 358 |
"TCGA-LUSC/uni_v1/10x",
|
| 359 |
"TCGA-LUSC/uni_v1/20x",
|
|
@@ -375,6 +426,9 @@
|
|
| 375 |
"TCGA-MESO/hibou_l/10x",
|
| 376 |
"TCGA-MESO/hibou_l/20x",
|
| 377 |
"TCGA-MESO/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 378 |
"TCGA-MESO/titan/20x",
|
| 379 |
"TCGA-MESO/uni_v1/10x",
|
| 380 |
"TCGA-MESO/uni_v1/20x",
|
|
@@ -396,6 +450,9 @@
|
|
| 396 |
"TCGA-OV/hibou_l/10x",
|
| 397 |
"TCGA-OV/hibou_l/20x",
|
| 398 |
"TCGA-OV/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 399 |
"TCGA-OV/titan/20x",
|
| 400 |
"TCGA-OV/uni_v1/10x",
|
| 401 |
"TCGA-OV/uni_v1/20x",
|
|
@@ -417,6 +474,9 @@
|
|
| 417 |
"TCGA-PAAD/hibou_l/10x",
|
| 418 |
"TCGA-PAAD/hibou_l/20x",
|
| 419 |
"TCGA-PAAD/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 420 |
"TCGA-PAAD/titan/20x",
|
| 421 |
"TCGA-PAAD/uni_v1/10x",
|
| 422 |
"TCGA-PAAD/uni_v1/20x",
|
|
@@ -438,6 +498,9 @@
|
|
| 438 |
"TCGA-PCPG/hibou_l/10x",
|
| 439 |
"TCGA-PCPG/hibou_l/20x",
|
| 440 |
"TCGA-PCPG/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 441 |
"TCGA-PCPG/titan/20x",
|
| 442 |
"TCGA-PCPG/uni_v1/10x",
|
| 443 |
"TCGA-PCPG/uni_v1/20x",
|
|
@@ -459,6 +522,9 @@
|
|
| 459 |
"TCGA-PRAD/hibou_l/10x",
|
| 460 |
"TCGA-PRAD/hibou_l/20x",
|
| 461 |
"TCGA-PRAD/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 462 |
"TCGA-PRAD/titan/20x",
|
| 463 |
"TCGA-PRAD/uni_v1/10x",
|
| 464 |
"TCGA-PRAD/uni_v1/20x",
|
|
@@ -480,6 +546,9 @@
|
|
| 480 |
"TCGA-READ/hibou_l/10x",
|
| 481 |
"TCGA-READ/hibou_l/20x",
|
| 482 |
"TCGA-READ/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 483 |
"TCGA-READ/titan/20x",
|
| 484 |
"TCGA-READ/uni_v1/10x",
|
| 485 |
"TCGA-READ/uni_v1/20x",
|
|
@@ -501,6 +570,9 @@
|
|
| 501 |
"TCGA-SARC/hibou_l/10x",
|
| 502 |
"TCGA-SARC/hibou_l/20x",
|
| 503 |
"TCGA-SARC/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 504 |
"TCGA-SARC/titan/20x",
|
| 505 |
"TCGA-SARC/uni_v1/10x",
|
| 506 |
"TCGA-SARC/uni_v1/20x",
|
|
@@ -522,6 +594,9 @@
|
|
| 522 |
"TCGA-SKCM/hibou_l/10x",
|
| 523 |
"TCGA-SKCM/hibou_l/20x",
|
| 524 |
"TCGA-SKCM/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 525 |
"TCGA-SKCM/titan/20x",
|
| 526 |
"TCGA-SKCM/uni_v1/10x",
|
| 527 |
"TCGA-SKCM/uni_v1/20x",
|
|
@@ -543,6 +618,9 @@
|
|
| 543 |
"TCGA-STAD/hibou_l/10x",
|
| 544 |
"TCGA-STAD/hibou_l/20x",
|
| 545 |
"TCGA-STAD/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 546 |
"TCGA-STAD/titan/20x",
|
| 547 |
"TCGA-STAD/uni_v1/10x",
|
| 548 |
"TCGA-STAD/uni_v1/20x",
|
|
@@ -584,6 +662,9 @@
|
|
| 584 |
"TCGA-THCA/hibou_l/10x",
|
| 585 |
"TCGA-THCA/hibou_l/20x",
|
| 586 |
"TCGA-THCA/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 587 |
"TCGA-THCA/titan/20x",
|
| 588 |
"TCGA-THCA/uni_v1/10x",
|
| 589 |
"TCGA-THCA/uni_v1/20x",
|
|
@@ -605,6 +686,9 @@
|
|
| 605 |
"TCGA-THYM/hibou_l/10x",
|
| 606 |
"TCGA-THYM/hibou_l/20x",
|
| 607 |
"TCGA-THYM/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 608 |
"TCGA-THYM/titan/20x",
|
| 609 |
"TCGA-THYM/uni_v1/10x",
|
| 610 |
"TCGA-THYM/uni_v1/20x",
|
|
@@ -626,6 +710,9 @@
|
|
| 626 |
"TCGA-UCEC/hibou_l/10x",
|
| 627 |
"TCGA-UCEC/hibou_l/20x",
|
| 628 |
"TCGA-UCEC/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 629 |
"TCGA-UCEC/titan/20x",
|
| 630 |
"TCGA-UCEC/uni_v1/10x",
|
| 631 |
"TCGA-UCEC/uni_v1/20x",
|
|
@@ -647,6 +734,9 @@
|
|
| 647 |
"TCGA-UCS/hibou_l/10x",
|
| 648 |
"TCGA-UCS/hibou_l/20x",
|
| 649 |
"TCGA-UCS/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 650 |
"TCGA-UCS/titan/20x",
|
| 651 |
"TCGA-UCS/uni_v1/10x",
|
| 652 |
"TCGA-UCS/uni_v1/20x",
|
|
@@ -668,6 +758,9 @@
|
|
| 668 |
"TCGA-UVM/hibou_l/10x",
|
| 669 |
"TCGA-UVM/hibou_l/20x",
|
| 670 |
"TCGA-UVM/hibou_l/5x",
|
|
|
|
|
|
|
|
|
|
| 671 |
"TCGA-UVM/titan/20x",
|
| 672 |
"TCGA-UVM/uni_v1/10x",
|
| 673 |
"TCGA-UVM/uni_v1/20x",
|
|
@@ -676,7 +769,7 @@
|
|
| 676 |
"TCGA-UVM/uni_v2/20x",
|
| 677 |
"TCGA-UVM/uni_v2/5x"
|
| 678 |
],
|
| 679 |
-
"commit_message": "Upload TCGA partial batch: chief, conch_v1, ctranspath, gigapath, gigapath_slide, titan, uni_v1, uni_v2,
|
| 680 |
"builder_run_id": null,
|
| 681 |
"source_hashes": {
|
| 682 |
"location": "metadata/h5_validation.parquet",
|
|
|
|
| 1 |
{
|
| 2 |
"schema_version": 1,
|
| 3 |
"dataset_version": "v0.1.0-tcga-partial",
|
| 4 |
+
"created_utc": "2026-10-28T22:08:25.303630+00:00",
|
| 5 |
"parent_revision": null,
|
| 6 |
"changed_groups": [
|
| 7 |
"TCGA-ACC/chief/10x",
|
|
|
|
| 18 |
"TCGA-ACC/hibou_l/10x",
|
| 19 |
"TCGA-ACC/hibou_l/20x",
|
| 20 |
"TCGA-ACC/hibou_l/5x",
|
| 21 |
+
"TCGA-ACC/hoptimus0/10x",
|
| 22 |
+
"TCGA-ACC/hoptimus0/20x",
|
| 23 |
+
"TCGA-ACC/hoptimus0/5x",
|
| 24 |
"TCGA-ACC/titan/20x",
|
| 25 |
"TCGA-ACC/uni_v1/10x",
|
| 26 |
"TCGA-ACC/uni_v1/20x",
|
|
|
|
| 42 |
"TCGA-BLCA/hibou_l/10x",
|
| 43 |
"TCGA-BLCA/hibou_l/20x",
|
| 44 |
"TCGA-BLCA/hibou_l/5x",
|
| 45 |
+
"TCGA-BLCA/hoptimus0/10x",
|
| 46 |
+
"TCGA-BLCA/hoptimus0/20x",
|
| 47 |
+
"TCGA-BLCA/hoptimus0/5x",
|
| 48 |
"TCGA-BLCA/titan/20x",
|
| 49 |
"TCGA-BLCA/uni_v1/10x",
|
| 50 |
"TCGA-BLCA/uni_v1/20x",
|
|
|
|
| 66 |
"TCGA-BRCA/hibou_l/10x",
|
| 67 |
"TCGA-BRCA/hibou_l/20x",
|
| 68 |
"TCGA-BRCA/hibou_l/5x",
|
| 69 |
+
"TCGA-BRCA/hoptimus0/10x",
|
| 70 |
+
"TCGA-BRCA/hoptimus0/20x",
|
| 71 |
+
"TCGA-BRCA/hoptimus0/5x",
|
| 72 |
"TCGA-BRCA/titan/20x",
|
| 73 |
"TCGA-BRCA/uni_v1/10x",
|
| 74 |
"TCGA-BRCA/uni_v1/20x",
|
|
|
|
| 90 |
"TCGA-CESC/hibou_l/10x",
|
| 91 |
"TCGA-CESC/hibou_l/20x",
|
| 92 |
"TCGA-CESC/hibou_l/5x",
|
| 93 |
+
"TCGA-CESC/hoptimus0/10x",
|
| 94 |
+
"TCGA-CESC/hoptimus0/20x",
|
| 95 |
+
"TCGA-CESC/hoptimus0/5x",
|
| 96 |
"TCGA-CESC/titan/20x",
|
| 97 |
"TCGA-CESC/uni_v1/10x",
|
| 98 |
"TCGA-CESC/uni_v1/20x",
|
|
|
|
| 114 |
"TCGA-CHOL/hibou_l/10x",
|
| 115 |
"TCGA-CHOL/hibou_l/20x",
|
| 116 |
"TCGA-CHOL/hibou_l/5x",
|
| 117 |
+
"TCGA-CHOL/hoptimus0/10x",
|
| 118 |
+
"TCGA-CHOL/hoptimus0/20x",
|
| 119 |
+
"TCGA-CHOL/hoptimus0/5x",
|
| 120 |
"TCGA-CHOL/titan/20x",
|
| 121 |
"TCGA-CHOL/uni_v1/10x",
|
| 122 |
"TCGA-CHOL/uni_v1/20x",
|
|
|
|
| 138 |
"TCGA-COAD/hibou_l/10x",
|
| 139 |
"TCGA-COAD/hibou_l/20x",
|
| 140 |
"TCGA-COAD/hibou_l/5x",
|
| 141 |
+
"TCGA-COAD/hoptimus0/10x",
|
| 142 |
+
"TCGA-COAD/hoptimus0/20x",
|
| 143 |
+
"TCGA-COAD/hoptimus0/5x",
|
| 144 |
"TCGA-COAD/titan/20x",
|
| 145 |
"TCGA-COAD/uni_v1/10x",
|
| 146 |
"TCGA-COAD/uni_v1/20x",
|
|
|
|
| 162 |
"TCGA-DLBC/hibou_l/10x",
|
| 163 |
"TCGA-DLBC/hibou_l/20x",
|
| 164 |
"TCGA-DLBC/hibou_l/5x",
|
| 165 |
+
"TCGA-DLBC/hoptimus0/10x",
|
| 166 |
+
"TCGA-DLBC/hoptimus0/20x",
|
| 167 |
+
"TCGA-DLBC/hoptimus0/5x",
|
| 168 |
"TCGA-DLBC/titan/20x",
|
| 169 |
"TCGA-DLBC/uni_v1/10x",
|
| 170 |
"TCGA-DLBC/uni_v1/20x",
|
|
|
|
| 186 |
"TCGA-ESCA/hibou_l/10x",
|
| 187 |
"TCGA-ESCA/hibou_l/20x",
|
| 188 |
"TCGA-ESCA/hibou_l/5x",
|
| 189 |
+
"TCGA-ESCA/hoptimus0/10x",
|
| 190 |
+
"TCGA-ESCA/hoptimus0/20x",
|
| 191 |
+
"TCGA-ESCA/hoptimus0/5x",
|
| 192 |
"TCGA-ESCA/titan/20x",
|
| 193 |
"TCGA-ESCA/uni_v1/10x",
|
| 194 |
"TCGA-ESCA/uni_v1/20x",
|
|
|
|
| 210 |
"TCGA-GBM/hibou_l/10x",
|
| 211 |
"TCGA-GBM/hibou_l/20x",
|
| 212 |
"TCGA-GBM/hibou_l/5x",
|
| 213 |
+
"TCGA-GBM/hoptimus0/10x",
|
| 214 |
+
"TCGA-GBM/hoptimus0/20x",
|
| 215 |
+
"TCGA-GBM/hoptimus0/5x",
|
| 216 |
"TCGA-GBM/titan/20x",
|
| 217 |
"TCGA-GBM/uni_v1/10x",
|
| 218 |
"TCGA-GBM/uni_v1/20x",
|
|
|
|
| 234 |
"TCGA-HNSC/hibou_l/10x",
|
| 235 |
"TCGA-HNSC/hibou_l/20x",
|
| 236 |
"TCGA-HNSC/hibou_l/5x",
|
| 237 |
+
"TCGA-HNSC/hoptimus0/10x",
|
| 238 |
+
"TCGA-HNSC/hoptimus0/20x",
|
| 239 |
+
"TCGA-HNSC/hoptimus0/5x",
|
| 240 |
"TCGA-HNSC/titan/20x",
|
| 241 |
"TCGA-HNSC/uni_v1/10x",
|
| 242 |
"TCGA-HNSC/uni_v1/20x",
|
|
|
|
| 258 |
"TCGA-KICH/hibou_l/10x",
|
| 259 |
"TCGA-KICH/hibou_l/20x",
|
| 260 |
"TCGA-KICH/hibou_l/5x",
|
| 261 |
+
"TCGA-KICH/hoptimus0/10x",
|
| 262 |
+
"TCGA-KICH/hoptimus0/20x",
|
| 263 |
+
"TCGA-KICH/hoptimus0/5x",
|
| 264 |
"TCGA-KICH/titan/20x",
|
| 265 |
"TCGA-KICH/uni_v1/10x",
|
| 266 |
"TCGA-KICH/uni_v1/20x",
|
|
|
|
| 282 |
"TCGA-KIRC/hibou_l/10x",
|
| 283 |
"TCGA-KIRC/hibou_l/20x",
|
| 284 |
"TCGA-KIRC/hibou_l/5x",
|
| 285 |
+
"TCGA-KIRC/hoptimus0/10x",
|
| 286 |
+
"TCGA-KIRC/hoptimus0/20x",
|
| 287 |
+
"TCGA-KIRC/hoptimus0/5x",
|
| 288 |
"TCGA-KIRC/titan/20x",
|
| 289 |
"TCGA-KIRC/uni_v1/10x",
|
| 290 |
"TCGA-KIRC/uni_v1/20x",
|
|
|
|
| 306 |
"TCGA-KIRP/hibou_l/10x",
|
| 307 |
"TCGA-KIRP/hibou_l/20x",
|
| 308 |
"TCGA-KIRP/hibou_l/5x",
|
| 309 |
+
"TCGA-KIRP/hoptimus0/10x",
|
| 310 |
+
"TCGA-KIRP/hoptimus0/20x",
|
| 311 |
+
"TCGA-KIRP/hoptimus0/5x",
|
| 312 |
"TCGA-KIRP/titan/20x",
|
| 313 |
"TCGA-KIRP/uni_v1/10x",
|
| 314 |
"TCGA-KIRP/uni_v1/20x",
|
|
|
|
| 330 |
"TCGA-LGG/hibou_l/10x",
|
| 331 |
"TCGA-LGG/hibou_l/20x",
|
| 332 |
"TCGA-LGG/hibou_l/5x",
|
| 333 |
+
"TCGA-LGG/hoptimus0/10x",
|
| 334 |
+
"TCGA-LGG/hoptimus0/20x",
|
| 335 |
+
"TCGA-LGG/hoptimus0/5x",
|
| 336 |
"TCGA-LGG/titan/20x",
|
| 337 |
"TCGA-LGG/uni_v1/10x",
|
| 338 |
"TCGA-LGG/uni_v1/20x",
|
|
|
|
| 354 |
"TCGA-LIHC/hibou_l/10x",
|
| 355 |
"TCGA-LIHC/hibou_l/20x",
|
| 356 |
"TCGA-LIHC/hibou_l/5x",
|
| 357 |
+
"TCGA-LIHC/hoptimus0/10x",
|
| 358 |
+
"TCGA-LIHC/hoptimus0/20x",
|
| 359 |
+
"TCGA-LIHC/hoptimus0/5x",
|
| 360 |
"TCGA-LIHC/titan/20x",
|
| 361 |
"TCGA-LIHC/uni_v1/10x",
|
| 362 |
"TCGA-LIHC/uni_v1/20x",
|
|
|
|
| 378 |
"TCGA-LUAD/hibou_l/10x",
|
| 379 |
"TCGA-LUAD/hibou_l/20x",
|
| 380 |
"TCGA-LUAD/hibou_l/5x",
|
| 381 |
+
"TCGA-LUAD/hoptimus0/10x",
|
| 382 |
+
"TCGA-LUAD/hoptimus0/20x",
|
| 383 |
+
"TCGA-LUAD/hoptimus0/5x",
|
| 384 |
"TCGA-LUAD/titan/20x",
|
| 385 |
"TCGA-LUAD/uni_v1/10x",
|
| 386 |
"TCGA-LUAD/uni_v1/20x",
|
|
|
|
| 402 |
"TCGA-LUSC/hibou_l/10x",
|
| 403 |
"TCGA-LUSC/hibou_l/20x",
|
| 404 |
"TCGA-LUSC/hibou_l/5x",
|
| 405 |
+
"TCGA-LUSC/hoptimus0/10x",
|
| 406 |
+
"TCGA-LUSC/hoptimus0/20x",
|
| 407 |
+
"TCGA-LUSC/hoptimus0/5x",
|
| 408 |
"TCGA-LUSC/titan/20x",
|
| 409 |
"TCGA-LUSC/uni_v1/10x",
|
| 410 |
"TCGA-LUSC/uni_v1/20x",
|
|
|
|
| 426 |
"TCGA-MESO/hibou_l/10x",
|
| 427 |
"TCGA-MESO/hibou_l/20x",
|
| 428 |
"TCGA-MESO/hibou_l/5x",
|
| 429 |
+
"TCGA-MESO/hoptimus0/10x",
|
| 430 |
+
"TCGA-MESO/hoptimus0/20x",
|
| 431 |
+
"TCGA-MESO/hoptimus0/5x",
|
| 432 |
"TCGA-MESO/titan/20x",
|
| 433 |
"TCGA-MESO/uni_v1/10x",
|
| 434 |
"TCGA-MESO/uni_v1/20x",
|
|
|
|
| 450 |
"TCGA-OV/hibou_l/10x",
|
| 451 |
"TCGA-OV/hibou_l/20x",
|
| 452 |
"TCGA-OV/hibou_l/5x",
|
| 453 |
+
"TCGA-OV/hoptimus0/10x",
|
| 454 |
+
"TCGA-OV/hoptimus0/20x",
|
| 455 |
+
"TCGA-OV/hoptimus0/5x",
|
| 456 |
"TCGA-OV/titan/20x",
|
| 457 |
"TCGA-OV/uni_v1/10x",
|
| 458 |
"TCGA-OV/uni_v1/20x",
|
|
|
|
| 474 |
"TCGA-PAAD/hibou_l/10x",
|
| 475 |
"TCGA-PAAD/hibou_l/20x",
|
| 476 |
"TCGA-PAAD/hibou_l/5x",
|
| 477 |
+
"TCGA-PAAD/hoptimus0/10x",
|
| 478 |
+
"TCGA-PAAD/hoptimus0/20x",
|
| 479 |
+
"TCGA-PAAD/hoptimus0/5x",
|
| 480 |
"TCGA-PAAD/titan/20x",
|
| 481 |
"TCGA-PAAD/uni_v1/10x",
|
| 482 |
"TCGA-PAAD/uni_v1/20x",
|
|
|
|
| 498 |
"TCGA-PCPG/hibou_l/10x",
|
| 499 |
"TCGA-PCPG/hibou_l/20x",
|
| 500 |
"TCGA-PCPG/hibou_l/5x",
|
| 501 |
+
"TCGA-PCPG/hoptimus0/10x",
|
| 502 |
+
"TCGA-PCPG/hoptimus0/20x",
|
| 503 |
+
"TCGA-PCPG/hoptimus0/5x",
|
| 504 |
"TCGA-PCPG/titan/20x",
|
| 505 |
"TCGA-PCPG/uni_v1/10x",
|
| 506 |
"TCGA-PCPG/uni_v1/20x",
|
|
|
|
| 522 |
"TCGA-PRAD/hibou_l/10x",
|
| 523 |
"TCGA-PRAD/hibou_l/20x",
|
| 524 |
"TCGA-PRAD/hibou_l/5x",
|
| 525 |
+
"TCGA-PRAD/hoptimus0/10x",
|
| 526 |
+
"TCGA-PRAD/hoptimus0/20x",
|
| 527 |
+
"TCGA-PRAD/hoptimus0/5x",
|
| 528 |
"TCGA-PRAD/titan/20x",
|
| 529 |
"TCGA-PRAD/uni_v1/10x",
|
| 530 |
"TCGA-PRAD/uni_v1/20x",
|
|
|
|
| 546 |
"TCGA-READ/hibou_l/10x",
|
| 547 |
"TCGA-READ/hibou_l/20x",
|
| 548 |
"TCGA-READ/hibou_l/5x",
|
| 549 |
+
"TCGA-READ/hoptimus0/10x",
|
| 550 |
+
"TCGA-READ/hoptimus0/20x",
|
| 551 |
+
"TCGA-READ/hoptimus0/5x",
|
| 552 |
"TCGA-READ/titan/20x",
|
| 553 |
"TCGA-READ/uni_v1/10x",
|
| 554 |
"TCGA-READ/uni_v1/20x",
|
|
|
|
| 570 |
"TCGA-SARC/hibou_l/10x",
|
| 571 |
"TCGA-SARC/hibou_l/20x",
|
| 572 |
"TCGA-SARC/hibou_l/5x",
|
| 573 |
+
"TCGA-SARC/hoptimus0/10x",
|
| 574 |
+
"TCGA-SARC/hoptimus0/20x",
|
| 575 |
+
"TCGA-SARC/hoptimus0/5x",
|
| 576 |
"TCGA-SARC/titan/20x",
|
| 577 |
"TCGA-SARC/uni_v1/10x",
|
| 578 |
"TCGA-SARC/uni_v1/20x",
|
|
|
|
| 594 |
"TCGA-SKCM/hibou_l/10x",
|
| 595 |
"TCGA-SKCM/hibou_l/20x",
|
| 596 |
"TCGA-SKCM/hibou_l/5x",
|
| 597 |
+
"TCGA-SKCM/hoptimus0/10x",
|
| 598 |
+
"TCGA-SKCM/hoptimus0/20x",
|
| 599 |
+
"TCGA-SKCM/hoptimus0/5x",
|
| 600 |
"TCGA-SKCM/titan/20x",
|
| 601 |
"TCGA-SKCM/uni_v1/10x",
|
| 602 |
"TCGA-SKCM/uni_v1/20x",
|
|
|
|
| 618 |
"TCGA-STAD/hibou_l/10x",
|
| 619 |
"TCGA-STAD/hibou_l/20x",
|
| 620 |
"TCGA-STAD/hibou_l/5x",
|
| 621 |
+
"TCGA-STAD/hoptimus0/10x",
|
| 622 |
+
"TCGA-STAD/hoptimus0/20x",
|
| 623 |
+
"TCGA-STAD/hoptimus0/5x",
|
| 624 |
"TCGA-STAD/titan/20x",
|
| 625 |
"TCGA-STAD/uni_v1/10x",
|
| 626 |
"TCGA-STAD/uni_v1/20x",
|
|
|
|
| 662 |
"TCGA-THCA/hibou_l/10x",
|
| 663 |
"TCGA-THCA/hibou_l/20x",
|
| 664 |
"TCGA-THCA/hibou_l/5x",
|
| 665 |
+
"TCGA-THCA/hoptimus0/10x",
|
| 666 |
+
"TCGA-THCA/hoptimus0/20x",
|
| 667 |
+
"TCGA-THCA/hoptimus0/5x",
|
| 668 |
"TCGA-THCA/titan/20x",
|
| 669 |
"TCGA-THCA/uni_v1/10x",
|
| 670 |
"TCGA-THCA/uni_v1/20x",
|
|
|
|
| 686 |
"TCGA-THYM/hibou_l/10x",
|
| 687 |
"TCGA-THYM/hibou_l/20x",
|
| 688 |
"TCGA-THYM/hibou_l/5x",
|
| 689 |
+
"TCGA-THYM/hoptimus0/10x",
|
| 690 |
+
"TCGA-THYM/hoptimus0/20x",
|
| 691 |
+
"TCGA-THYM/hoptimus0/5x",
|
| 692 |
"TCGA-THYM/titan/20x",
|
| 693 |
"TCGA-THYM/uni_v1/10x",
|
| 694 |
"TCGA-THYM/uni_v1/20x",
|
|
|
|
| 710 |
"TCGA-UCEC/hibou_l/10x",
|
| 711 |
"TCGA-UCEC/hibou_l/20x",
|
| 712 |
"TCGA-UCEC/hibou_l/5x",
|
| 713 |
+
"TCGA-UCEC/hoptimus0/10x",
|
| 714 |
+
"TCGA-UCEC/hoptimus0/20x",
|
| 715 |
+
"TCGA-UCEC/hoptimus0/5x",
|
| 716 |
"TCGA-UCEC/titan/20x",
|
| 717 |
"TCGA-UCEC/uni_v1/10x",
|
| 718 |
"TCGA-UCEC/uni_v1/20x",
|
|
|
|
| 734 |
"TCGA-UCS/hibou_l/10x",
|
| 735 |
"TCGA-UCS/hibou_l/20x",
|
| 736 |
"TCGA-UCS/hibou_l/5x",
|
| 737 |
+
"TCGA-UCS/hoptimus0/10x",
|
| 738 |
+
"TCGA-UCS/hoptimus0/20x",
|
| 739 |
+
"TCGA-UCS/hoptimus0/5x",
|
| 740 |
"TCGA-UCS/titan/20x",
|
| 741 |
"TCGA-UCS/uni_v1/10x",
|
| 742 |
"TCGA-UCS/uni_v1/20x",
|
|
|
|
| 758 |
"TCGA-UVM/hibou_l/10x",
|
| 759 |
"TCGA-UVM/hibou_l/20x",
|
| 760 |
"TCGA-UVM/hibou_l/5x",
|
| 761 |
+
"TCGA-UVM/hoptimus0/10x",
|
| 762 |
+
"TCGA-UVM/hoptimus0/20x",
|
| 763 |
+
"TCGA-UVM/hoptimus0/5x",
|
| 764 |
"TCGA-UVM/titan/20x",
|
| 765 |
"TCGA-UVM/uni_v1/10x",
|
| 766 |
"TCGA-UVM/uni_v1/20x",
|
|
|
|
| 769 |
"TCGA-UVM/uni_v2/20x",
|
| 770 |
"TCGA-UVM/uni_v2/5x"
|
| 771 |
],
|
| 772 |
+
"commit_message": "Upload TCGA partial batch: chief, conch_v1, ctranspath, gigapath, gigapath_slide, hibou_l, titan, uni_v1, uni_v2, hoptimus0",
|
| 773 |
"builder_run_id": null,
|
| 774 |
"source_hashes": {
|
| 775 |
"location": "metadata/h5_validation.parquet",
|
metadata/shard_manifest.parquet
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
-
size
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:91294d227e97301c3a90f4ff0c8ea2fa3c4882d1f6ef1596c7aaa6384c6814b4
|
| 3 |
+
size 165860
|
metadata/slide_registry.parquet
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
-
size
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:a6d5afc6de6db3c1df40a324fb046acc3c009e1229f438c1b2dd01dbfa39b3a2
|
| 3 |
+
size 17040253
|
metadata/upload_status.json
CHANGED
|
@@ -1,7 +1,7 @@
|
|
| 1 |
{
|
| 2 |
"schema_version": 1,
|
| 3 |
"manifest_type": "tcga_atlas_upload_status",
|
| 4 |
-
"generated_utc": "2026-10-
|
| 5 |
"dataset_root": "/N/project/hancock/hf_tcga_atlas_test",
|
| 6 |
"hub_target": "IUCompPath/TRACE",
|
| 7 |
"omitted_models": {
|
|
@@ -152,7 +152,7 @@
|
|
| 152 |
"not_available": 4
|
| 153 |
},
|
| 154 |
"local_ready_groups": 1146,
|
| 155 |
-
"uploaded_groups":
|
| 156 |
"failed_groups": 0,
|
| 157 |
"excluded_groups": 2,
|
| 158 |
"not_available_groups": 4,
|
|
@@ -163,7 +163,7 @@
|
|
| 163 |
"local_ready_compressed_file_size_bytes": 13733315395411,
|
| 164 |
"local_ready_estimated_uncompressed_bytes": 14810878690263,
|
| 165 |
"validation_non_ok": 0,
|
| 166 |
-
"pending_upload_groups":
|
| 167 |
"upload_failed_groups": 0
|
| 168 |
},
|
| 169 |
"statistics": {
|
|
@@ -1306,6 +1306,119 @@
|
|
| 1306 |
"shard_count": 1122,
|
| 1307 |
"row_count": 1114080,
|
| 1308 |
"compressed_file_size_bytes": 1073459943964
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
| 1309 |
}
|
| 1310 |
],
|
| 1311 |
"cells": [
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|
@@ -17087,11 +17200,11 @@
|
|
| 17087 |
"magnification": "5x",
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| 17088 |
"group": "TCGA-ACC/hoptimus0/5x",
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| 17089 |
"status": "local_ready",
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| 17090 |
-
"uploaded":
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| 17091 |
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@@ -17116,11 +17229,11 @@
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|
| 17116 |
"magnification": "10x",
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| 17117 |
"group": "TCGA-ACC/hoptimus0/10x",
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| 17118 |
"status": "local_ready",
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| 17119 |
-
"uploaded":
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| 17120 |
-
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@@ -17145,11 +17258,11 @@
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|
| 17145 |
"magnification": "20x",
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| 17146 |
"group": "TCGA-ACC/hoptimus0/20x",
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| 17147 |
"status": "local_ready",
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| 17148 |
-
"uploaded":
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| 17149 |
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@@ -17174,11 +17287,11 @@
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|
| 17174 |
"magnification": "5x",
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| 17175 |
"group": "TCGA-BLCA/hoptimus0/5x",
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| 17176 |
"status": "local_ready",
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| 17177 |
-
"uploaded":
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| 17178 |
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| 17179 |
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| 17180 |
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@@ -17203,11 +17316,11 @@
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|
| 17203 |
"magnification": "10x",
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| 17204 |
"group": "TCGA-BLCA/hoptimus0/10x",
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| 17205 |
"status": "local_ready",
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| 17206 |
-
"uploaded":
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| 17207 |
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| 17208 |
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| 17209 |
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@@ -17232,11 +17345,11 @@
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|
| 17232 |
"magnification": "20x",
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| 17233 |
"group": "TCGA-BLCA/hoptimus0/20x",
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| 17234 |
"status": "local_ready",
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| 17235 |
-
"uploaded":
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| 17236 |
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| 17237 |
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| 17238 |
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@@ -17261,11 +17374,11 @@
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|
| 17261 |
"magnification": "5x",
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| 17262 |
"group": "TCGA-BRCA/hoptimus0/5x",
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| 17263 |
"status": "local_ready",
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| 17264 |
-
"uploaded":
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| 17265 |
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| 17266 |
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@@ -17290,11 +17403,11 @@
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| 17290 |
"magnification": "10x",
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| 17291 |
"group": "TCGA-BRCA/hoptimus0/10x",
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| 17292 |
"status": "local_ready",
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| 17293 |
-
"uploaded":
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| 17294 |
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| 17296 |
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|
| 17319 |
"magnification": "20x",
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| 17320 |
"group": "TCGA-BRCA/hoptimus0/20x",
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| 17321 |
"status": "local_ready",
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| 17322 |
-
"uploaded":
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| 17323 |
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"upload_job_id":
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| 17324 |
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| 17325 |
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|
| 17348 |
"magnification": "5x",
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| 17349 |
"group": "TCGA-CESC/hoptimus0/5x",
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| 17350 |
"status": "local_ready",
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| 17351 |
-
"uploaded":
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| 17352 |
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|
| 17377 |
"magnification": "10x",
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| 17378 |
"group": "TCGA-CESC/hoptimus0/10x",
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| 17379 |
"status": "local_ready",
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| 17380 |
-
"uploaded":
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| 17381 |
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| 17382 |
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| 17383 |
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|
| 17406 |
"magnification": "20x",
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| 17407 |
"group": "TCGA-CESC/hoptimus0/20x",
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| 17408 |
"status": "local_ready",
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| 17409 |
-
"uploaded":
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| 17410 |
-
"upload_job_id":
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| 17411 |
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"uploaded_revision":
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| 17412 |
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| 17413 |
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| 17414 |
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| 17415 |
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@@ -17435,11 +17548,11 @@
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|
| 17435 |
"magnification": "5x",
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| 17436 |
"group": "TCGA-CHOL/hoptimus0/5x",
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| 17437 |
"status": "local_ready",
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| 17438 |
-
"uploaded":
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| 17439 |
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"upload_job_id":
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| 17440 |
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"uploaded_revision":
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| 17441 |
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| 17442 |
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| 17443 |
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| 17444 |
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| 17445 |
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@@ -17464,11 +17577,11 @@
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|
| 17464 |
"magnification": "10x",
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| 17465 |
"group": "TCGA-CHOL/hoptimus0/10x",
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| 17466 |
"status": "local_ready",
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| 17467 |
-
"uploaded":
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| 17468 |
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"upload_job_id":
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| 17469 |
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"uploaded_revision":
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| 17470 |
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| 17471 |
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@@ -17493,11 +17606,11 @@
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|
| 17493 |
"magnification": "20x",
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| 17494 |
"group": "TCGA-CHOL/hoptimus0/20x",
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| 17495 |
"status": "local_ready",
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| 17496 |
-
"uploaded":
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| 17497 |
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"upload_job_id":
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| 17498 |
-
"uploaded_revision":
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| 17499 |
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| 17500 |
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| 17501 |
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| 17502 |
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| 17503 |
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@@ -17522,11 +17635,11 @@
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|
| 17522 |
"magnification": "5x",
|
| 17523 |
"group": "TCGA-COAD/hoptimus0/5x",
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| 17524 |
"status": "local_ready",
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| 17525 |
-
"uploaded":
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| 17526 |
-
"upload_job_id":
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| 17527 |
-
"uploaded_revision":
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| 17528 |
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| 17529 |
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| 17530 |
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| 17531 |
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@@ -17551,11 +17664,11 @@
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|
| 17551 |
"magnification": "10x",
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| 17552 |
"group": "TCGA-COAD/hoptimus0/10x",
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| 17553 |
"status": "local_ready",
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| 17554 |
-
"uploaded":
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| 17555 |
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"upload_job_id":
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| 17556 |
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"uploaded_revision":
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| 17557 |
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| 17558 |
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| 17559 |
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| 17560 |
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@@ -17580,11 +17693,11 @@
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|
| 17580 |
"magnification": "20x",
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| 17581 |
"group": "TCGA-COAD/hoptimus0/20x",
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| 17582 |
"status": "local_ready",
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| 17583 |
-
"uploaded":
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| 17584 |
-
"upload_job_id":
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| 17585 |
-
"uploaded_revision":
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| 17586 |
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"uploaded_commit":
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| 17587 |
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| 17588 |
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| 17589 |
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| 17590 |
"feature_types": [
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@@ -17609,11 +17722,11 @@
|
|
| 17609 |
"magnification": "5x",
|
| 17610 |
"group": "TCGA-DLBC/hoptimus0/5x",
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| 17611 |
"status": "local_ready",
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| 17612 |
-
"uploaded":
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| 17613 |
-
"upload_job_id":
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| 17614 |
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"uploaded_revision":
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| 17615 |
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"uploaded_commit":
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| 17616 |
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| 17617 |
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| 17618 |
"quarantine": null,
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| 17619 |
"feature_types": [
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@@ -17638,11 +17751,11 @@
|
|
| 17638 |
"magnification": "10x",
|
| 17639 |
"group": "TCGA-DLBC/hoptimus0/10x",
|
| 17640 |
"status": "local_ready",
|
| 17641 |
-
"uploaded":
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| 17642 |
-
"upload_job_id":
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| 17643 |
-
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| 17644 |
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| 17645 |
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| 17646 |
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| 17647 |
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| 17648 |
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@@ -17667,11 +17780,11 @@
|
|
| 17667 |
"magnification": "20x",
|
| 17668 |
"group": "TCGA-DLBC/hoptimus0/20x",
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| 17669 |
"status": "local_ready",
|
| 17670 |
-
"uploaded":
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| 17671 |
-
"upload_job_id":
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| 17672 |
-
"uploaded_revision":
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| 17673 |
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| 17674 |
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| 17675 |
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| 17676 |
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| 17677 |
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|
@@ -17696,11 +17809,11 @@
|
|
| 17696 |
"magnification": "5x",
|
| 17697 |
"group": "TCGA-ESCA/hoptimus0/5x",
|
| 17698 |
"status": "local_ready",
|
| 17699 |
-
"uploaded":
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| 17700 |
-
"upload_job_id":
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| 17701 |
-
"uploaded_revision":
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| 17702 |
-
"uploaded_commit":
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| 17703 |
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| 17704 |
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| 17705 |
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| 17706 |
"feature_types": [
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@@ -17725,11 +17838,11 @@
|
|
| 17725 |
"magnification": "10x",
|
| 17726 |
"group": "TCGA-ESCA/hoptimus0/10x",
|
| 17727 |
"status": "local_ready",
|
| 17728 |
-
"uploaded":
|
| 17729 |
-
"upload_job_id":
|
| 17730 |
-
"uploaded_revision":
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| 17731 |
-
"uploaded_commit":
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| 17732 |
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| 17733 |
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| 17734 |
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| 17735 |
"feature_types": [
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@@ -17754,11 +17867,11 @@
|
|
| 17754 |
"magnification": "20x",
|
| 17755 |
"group": "TCGA-ESCA/hoptimus0/20x",
|
| 17756 |
"status": "local_ready",
|
| 17757 |
-
"uploaded":
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| 17758 |
-
"upload_job_id":
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| 17759 |
-
"uploaded_revision":
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| 17760 |
-
"uploaded_commit":
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| 17761 |
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| 17762 |
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| 17763 |
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| 17764 |
"feature_types": [
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@@ -17783,11 +17896,11 @@
|
|
| 17783 |
"magnification": "5x",
|
| 17784 |
"group": "TCGA-GBM/hoptimus0/5x",
|
| 17785 |
"status": "local_ready",
|
| 17786 |
-
"uploaded":
|
| 17787 |
-
"upload_job_id":
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| 17788 |
-
"uploaded_revision":
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| 17789 |
-
"uploaded_commit":
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| 17790 |
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| 17791 |
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| 17792 |
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| 17793 |
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@@ -17812,11 +17925,11 @@
|
|
| 17812 |
"magnification": "10x",
|
| 17813 |
"group": "TCGA-GBM/hoptimus0/10x",
|
| 17814 |
"status": "local_ready",
|
| 17815 |
-
"uploaded":
|
| 17816 |
-
"upload_job_id":
|
| 17817 |
-
"uploaded_revision":
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| 17818 |
-
"uploaded_commit":
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| 17819 |
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| 17820 |
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| 17821 |
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| 17822 |
"feature_types": [
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|
@@ -17841,11 +17954,11 @@
|
|
| 17841 |
"magnification": "20x",
|
| 17842 |
"group": "TCGA-GBM/hoptimus0/20x",
|
| 17843 |
"status": "local_ready",
|
| 17844 |
-
"uploaded":
|
| 17845 |
-
"upload_job_id":
|
| 17846 |
-
"uploaded_revision":
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| 17847 |
-
"uploaded_commit":
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| 17848 |
-
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| 17849 |
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| 17850 |
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| 17851 |
"feature_types": [
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|
@@ -17870,11 +17983,11 @@
|
|
| 17870 |
"magnification": "5x",
|
| 17871 |
"group": "TCGA-HNSC/hoptimus0/5x",
|
| 17872 |
"status": "local_ready",
|
| 17873 |
-
"uploaded":
|
| 17874 |
-
"upload_job_id":
|
| 17875 |
-
"uploaded_revision":
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| 17876 |
-
"uploaded_commit":
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| 17877 |
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| 17878 |
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| 17879 |
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| 17880 |
"feature_types": [
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|
@@ -17899,11 +18012,11 @@
|
|
| 17899 |
"magnification": "10x",
|
| 17900 |
"group": "TCGA-HNSC/hoptimus0/10x",
|
| 17901 |
"status": "local_ready",
|
| 17902 |
-
"uploaded":
|
| 17903 |
-
"upload_job_id":
|
| 17904 |
-
"uploaded_revision":
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| 17905 |
-
"uploaded_commit":
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| 17906 |
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| 17907 |
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| 17908 |
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| 17909 |
"feature_types": [
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|
@@ -17928,11 +18041,11 @@
|
|
| 17928 |
"magnification": "20x",
|
| 17929 |
"group": "TCGA-HNSC/hoptimus0/20x",
|
| 17930 |
"status": "local_ready",
|
| 17931 |
-
"uploaded":
|
| 17932 |
-
"upload_job_id":
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| 17933 |
-
"uploaded_revision":
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| 17934 |
-
"uploaded_commit":
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| 17935 |
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| 17936 |
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| 17937 |
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| 17938 |
"feature_types": [
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@@ -17957,11 +18070,11 @@
|
|
| 17957 |
"magnification": "5x",
|
| 17958 |
"group": "TCGA-KICH/hoptimus0/5x",
|
| 17959 |
"status": "local_ready",
|
| 17960 |
-
"uploaded":
|
| 17961 |
-
"upload_job_id":
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| 17962 |
-
"uploaded_revision":
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| 17963 |
-
"uploaded_commit":
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| 17964 |
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| 17965 |
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| 17966 |
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| 17967 |
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@@ -17986,11 +18099,11 @@
|
|
| 17986 |
"magnification": "10x",
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| 17987 |
"group": "TCGA-KICH/hoptimus0/10x",
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| 17988 |
"status": "local_ready",
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| 17989 |
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"uploaded":
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| 17990 |
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| 17991 |
-
"uploaded_revision":
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| 17992 |
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| 18044 |
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| 18045 |
"group": "TCGA-KIRC/hoptimus0/5x",
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| 18046 |
"status": "local_ready",
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| 18047 |
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"uploaded":
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| 18048 |
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| 18073 |
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| 18074 |
"group": "TCGA-KIRC/hoptimus0/10x",
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| 18075 |
"status": "local_ready",
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| 18076 |
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| 18077 |
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| 18102 |
"magnification": "20x",
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| 18103 |
"group": "TCGA-KIRC/hoptimus0/20x",
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| 18104 |
"status": "local_ready",
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| 18105 |
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| 18106 |
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| 18131 |
"magnification": "5x",
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| 18132 |
"group": "TCGA-KIRP/hoptimus0/5x",
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| 18133 |
"status": "local_ready",
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| 18134 |
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| 18135 |
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| 18160 |
"magnification": "10x",
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| 18161 |
"group": "TCGA-KIRP/hoptimus0/10x",
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| 18162 |
"status": "local_ready",
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| 18163 |
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| 18164 |
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|
| 18189 |
"magnification": "20x",
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| 18190 |
"group": "TCGA-KIRP/hoptimus0/20x",
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| 18191 |
"status": "local_ready",
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| 18192 |
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| 18193 |
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| 18194 |
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|
| 18218 |
"magnification": "5x",
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| 18219 |
"group": "TCGA-LGG/hoptimus0/5x",
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| 18220 |
"status": "local_ready",
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| 18221 |
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"uploaded":
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| 18222 |
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| 18223 |
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| 18247 |
"magnification": "10x",
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| 18248 |
"group": "TCGA-LGG/hoptimus0/10x",
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| 18249 |
"status": "local_ready",
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| 18250 |
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| 18251 |
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| 18253 |
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|
| 18276 |
"magnification": "20x",
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| 18277 |
"group": "TCGA-LGG/hoptimus0/20x",
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| 18278 |
"status": "local_ready",
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| 18279 |
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| 18280 |
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| 18305 |
"magnification": "5x",
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| 18306 |
"group": "TCGA-LIHC/hoptimus0/5x",
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| 18307 |
"status": "local_ready",
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| 18308 |
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"uploaded":
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| 18309 |
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| 18311 |
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| 18313 |
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|
| 18334 |
"magnification": "10x",
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| 18335 |
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| 18336 |
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| 18337 |
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| 18338 |
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|
| 18363 |
"magnification": "20x",
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| 18364 |
"group": "TCGA-LIHC/hoptimus0/20x",
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| 18365 |
"status": "local_ready",
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| 18366 |
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| 18367 |
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| 18371 |
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|
| 18392 |
"magnification": "5x",
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| 18393 |
"group": "TCGA-LUAD/hoptimus0/5x",
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| 18394 |
"status": "local_ready",
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| 18395 |
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| 18396 |
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| 18400 |
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|
| 18421 |
"magnification": "10x",
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| 18422 |
"group": "TCGA-LUAD/hoptimus0/10x",
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| 18423 |
"status": "local_ready",
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| 18424 |
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| 18426 |
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|
| 18450 |
"magnification": "20x",
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| 18451 |
"group": "TCGA-LUAD/hoptimus0/20x",
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| 18452 |
"status": "local_ready",
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| 18453 |
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| 18454 |
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| 18479 |
"magnification": "5x",
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| 18480 |
"group": "TCGA-LUSC/hoptimus0/5x",
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| 18481 |
"status": "local_ready",
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| 18482 |
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| 18483 |
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|
| 18508 |
"magnification": "10x",
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| 18509 |
"group": "TCGA-LUSC/hoptimus0/10x",
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| 18510 |
"status": "local_ready",
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| 18511 |
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| 18512 |
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| 18514 |
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| 18537 |
"magnification": "20x",
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| 18538 |
"group": "TCGA-LUSC/hoptimus0/20x",
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| 18539 |
"status": "local_ready",
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| 18540 |
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| 18541 |
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@@ -18566,11 +18679,11 @@
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|
| 18566 |
"magnification": "5x",
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| 18567 |
"group": "TCGA-MESO/hoptimus0/5x",
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| 18568 |
"status": "local_ready",
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| 18569 |
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"uploaded":
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| 18570 |
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| 18571 |
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| 18574 |
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|
| 18595 |
"magnification": "10x",
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| 18596 |
"group": "TCGA-MESO/hoptimus0/10x",
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| 18597 |
"status": "local_ready",
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| 18598 |
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| 18599 |
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| 18600 |
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| 18601 |
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| 18603 |
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|
| 18624 |
"magnification": "20x",
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| 18625 |
"group": "TCGA-MESO/hoptimus0/20x",
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| 18626 |
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| 18627 |
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"uploaded":
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| 18628 |
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| 18629 |
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| 18630 |
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| 18632 |
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|
| 18653 |
"magnification": "5x",
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| 18654 |
"group": "TCGA-OV/hoptimus0/5x",
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| 18655 |
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| 18656 |
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| 18657 |
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|
| 18682 |
"magnification": "10x",
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| 18683 |
"group": "TCGA-OV/hoptimus0/10x",
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| 18684 |
"status": "local_ready",
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| 18685 |
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| 18686 |
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| 18711 |
"magnification": "20x",
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| 18712 |
"group": "TCGA-OV/hoptimus0/20x",
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| 18713 |
"status": "local_ready",
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| 18714 |
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| 18715 |
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| 18718 |
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| 18719 |
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|
| 18740 |
"magnification": "5x",
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| 18741 |
"group": "TCGA-PAAD/hoptimus0/5x",
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| 18742 |
"status": "local_ready",
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| 18743 |
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| 18744 |
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| 18748 |
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|
| 18769 |
"magnification": "10x",
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| 18770 |
"group": "TCGA-PAAD/hoptimus0/10x",
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| 18771 |
"status": "local_ready",
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| 18772 |
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| 18773 |
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| 18777 |
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|
| 18798 |
"magnification": "20x",
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| 18799 |
"group": "TCGA-PAAD/hoptimus0/20x",
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| 18800 |
"status": "local_ready",
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| 18801 |
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| 18802 |
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| 18806 |
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|
| 18827 |
"magnification": "5x",
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| 18828 |
"group": "TCGA-PCPG/hoptimus0/5x",
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| 18829 |
"status": "local_ready",
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| 18830 |
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"uploaded":
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| 18831 |
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| 18832 |
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| 18856 |
"magnification": "10x",
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| 18857 |
"group": "TCGA-PCPG/hoptimus0/10x",
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| 18858 |
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| 18859 |
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"uploaded":
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| 18860 |
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| 18885 |
"magnification": "20x",
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| 18886 |
"group": "TCGA-PCPG/hoptimus0/20x",
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| 18887 |
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| 18888 |
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| 18889 |
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| 18891 |
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| 18914 |
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| 18915 |
"group": "TCGA-PRAD/hoptimus0/5x",
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| 18916 |
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| 18917 |
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"uploaded":
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| 18918 |
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| 19685 |
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{
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"generated_utc": "2026-10-28T22:08:58.043291+00:00",
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| 5 |
"dataset_root": "/N/project/hancock/hf_tcga_atlas_test",
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"hub_target": "IUCompPath/TRACE",
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