Update README.md
Browse files
README.md
CHANGED
|
@@ -6,7 +6,7 @@ pretty_name: IDP-Euka-90
|
|
| 6 |
# IDP-Euka-90
|
| 7 |
|
| 8 |
**IDP-Euka-90** is a collection of eukaryotic protein sequences curated for representation learning and downstream analysis of **intrinsically disordered proteins/regions (IDPs/IDRs)**.
|
| 9 |
-
These sequences were obtained by running [Metapredict V3](https://pubmed.ncbi.nlm.nih.gov/34480923/) on all the available eukaryota proteomes from [UniProt](https://www.uniprot.org), which extracted all the IDP regions in each
|
| 10 |
The HF dataset is distributed as a train/val split and the backup csv has a **`split` column** prepared.
|
| 11 |
|
| 12 |
---
|
|
|
|
| 6 |
# IDP-Euka-90
|
| 7 |
|
| 8 |
**IDP-Euka-90** is a collection of eukaryotic protein sequences curated for representation learning and downstream analysis of **intrinsically disordered proteins/regions (IDPs/IDRs)**.
|
| 9 |
+
These sequences were obtained by running [Metapredict V3](https://pubmed.ncbi.nlm.nih.gov/34480923/) on all the available eukaryota proteomes from [UniProt](https://www.uniprot.org), which extracted all the IDP regions in each proteome. The sequences we subsequently clustered at 90% with [mmseqs2](https://github.com/soedinglab/MMseqs2) to remove all near duplicates.
|
| 10 |
The HF dataset is distributed as a train/val split and the backup csv has a **`split` column** prepared.
|
| 11 |
|
| 12 |
---
|