Split (1)

train · 155 rows

file_id stringlengths 9 13	species_common_name stringclasses 11 values	species_name stringclasses 11 values	file_assembly stringclasses 11 values	mean float64 0 11.3	std float64 0.03 67.6	assay stringclasses 9 values	description stringlengths 9 48
SRR13808079	arabidopsis	arabidopsis_thaliana	TAIR10	0.216331	3.103084	ribo-seq	flower_mature_riboseq
SRR13808080	arabidopsis	arabidopsis_thaliana	TAIR10	0.215328	3.470776	ribo-seq	flower_mature_riboseq_2
SRR13808081	arabidopsis	arabidopsis_thaliana	TAIR10	0.215493	16.233946	ribo-seq	fruit_mature_riboseq
SRR13808084	arabidopsis	arabidopsis_thaliana	TAIR10	0.219575	3.94744	ribo-seq	root_mature_riboseq
ENCSR628PLS	human	human	hg38	0.643542	0.933936	ATAC-seq	GM18861_chromatin_accessibility
ENCSR487QSB	human	human	hg38	0.658637	0.7493	ATAC-seq	GM18907_chromatin_accessibility
ENCSR410DWV	human	human	hg38	0.447577	1.277245	ATAC-seq	motor_neuron_chromatin_accessibility
ENCSR325NFE	human	human	hg38	0.726254	0.586216	ATAC-seq	bile_duct_chromatin_accessibility
ENCSR814RGG	human	human	hg38	0.725017	0.653799	ATAC-seq	ureter_chromatin_accessibility
ENCSR863PSM	human	human	hg38	0.744029	1.500768	Histone ChIP-seq	BLaER1_H3K4me1
ENCSR682BFG	human	human	hg38	0.666858	0.776578	Histone ChIP-seq	motor_neuron_H3K4me1
ENCSR754DRC	human	human	hg38	0.637346	0.526503	Histone ChIP-seq	motor_neuron_H3K27ac
ENCSR962OTG	human	human	hg38	0.486364	1.857933	Histone ChIP-seq	motor_neuron_H3K4me3
ENCSR046BCI_M	human	human	hg38	0.002119	0.836794	PRO-cap	A673_PROcap_minus
ENCSR046BCI_P	human	human	hg38	0.001286	0.618364	PRO-cap	A673_PROcap_plus
ENCSR100LIJ_M	human	human	hg38	0.003431	1.01507	PRO-cap	Caco-2_PROcap_minus
ENCSR100LIJ_P	human	human	hg38	0.003463	1.046981	PRO-cap	Caco-2_PROcap_plus
ENCSR935RNW_M	human	human	hg38	0.0037	1.161356	PRO-cap	Calu3_PROcap_minus
ENCSR935RNW_P	human	human	hg38	0.003761	1.281101	PRO-cap	Calu3_PROcap_plus
ENCSR114HGS_M	human	human	hg38	0.002195	0.143099	PRO-cap	K562_PROcap_minus
ENCSR114HGS_P	human	human	hg38	0.002275	0.13429	PRO-cap	K562_PROcap_plus
ENCSR799DGV_M	human	human	hg38	0.003359	0.952165	PRO-cap	MCF10A_PROcap_minus
ENCSR799DGV_P	human	human	hg38	0.004008	1.119795	PRO-cap	MCF10A_PROcap_plus
ENCSR154HRN_M	human	human	hg38	0.00498	0.092253	eCLIP	K562_HNRNPA1_eCLIP_minus
ENCSR154HRN_P	human	human	hg38	0.005795	0.381741	eCLIP	K562_HNRNPA1_eCLIP_plus
ENCSR249ROI_M	human	human	hg38	0.005745	0.092074	eCLIP	K562_HNRNPC_eCLIP_minus
ENCSR249ROI_P	human	human	hg38	0.006225	0.20057	eCLIP	K562_HNRNPC_eCLIP_plus
ENCSR321PWZ_M	human	human	hg38	0.008202	0.310416	eCLIP	K562_SRSF1_eCLIP_minus
ENCSR321PWZ_P	human	human	hg38	0.008774	0.471664	eCLIP	K562_SRSF1_eCLIP_plus
ENCSR484LTQ_M	human	human	hg38	0.004944	0.132172	eCLIP	K562_NCBP2_eCLIP_minus
ENCSR484LTQ_P	human	human	hg38	0.005483	0.360011	eCLIP	K562_NCBP2_eCLIP_plus
ENCSR862QCH_M	human	human	hg38	0.005307	0.217459	eCLIP	K562_U2AF1_eCLIP_minus
ENCSR862QCH_P	human	human	hg38	0.00627	1.111738	eCLIP	K562_U2AF1_eCLIP_plus
ENCSR527JGN_M	human	human	hg38	0.011776	1.28904	polyA plus RNA-seq	BLaER1_gene_expression_minus
ENCSR527JGN_P	human	human	hg38	0.010807	0.820803	polyA plus RNA-seq	BLaER1_gene_expression_plus
ENCSR701YIC	human	human	hg38	0.04636	2.486731	total RNA-seq	motor_neuron_gene_expression
ENCSR619DQO_M	human	human	hg38	0.01549	0.988215	total RNA-seq	ureter_gene_expression_minus
ENCSR619DQO_P	human	human	hg38	0.016125	1.266081	total RNA-seq	ureter_gene_expression_plus
SRR13808051	maize	zea_mays	Zm-B73-REFERENCE-NAM-5.0	0.012312	0.735386	ribo-seq	ear_V12_stage_riboseq
SRR13808052	maize	zea_mays	Zm-B73-REFERENCE-NAM-5.0	0.012541	1.096584	ribo-seq	ear_V12_stage_riboseq_2
SRR13808056	maize	zea_mays	Zm-B73-REFERENCE-NAM-5.0	0.012285	0.893298	ribo-seq	root_14days_riboseq
SRR13808058	maize	zea_mays	Zm-B73-REFERENCE-NAM-5.0	0.012694	2.407871	ribo-seq	seedling_14days_riboseq
SRR13808059	maize	zea_mays	Zm-B73-REFERENCE-NAM-5.0	0.012674	1.235684	ribo-seq	stem_14days_riboseq
SRR13808061	maize	zea_mays	Zm-B73-REFERENCE-NAM-5.0	0.012403	0.744676	ribo-seq	stem_14days_riboseq_2
SRR13808062	maize	zea_mays	Zm-B73-REFERENCE-NAM-5.0	0.012207	1.264256	ribo-seq	tassel_V12_stage_riboseq
SRR13808063	maize	zea_mays	Zm-B73-REFERENCE-NAM-5.0	0.012223	1.402009	ribo-seq	tassel_V12_stage_riboseq_2
SRR13808067	rice	oryza_sativa	IRGSP-1.0	0.07169	24.111786	ribo-seq	leaf_booting_stage_riboseq
SRR13808068	rice	oryza_sativa	IRGSP-1.0	0.069451	5.325562	ribo-seq	root_V2_stage_riboseq
SRR13808069	rice	oryza_sativa	IRGSP-1.0	0.069247	5.296749	ribo-seq	seedling_V2_stage_riboseq
SRR13808070	rice	oryza_sativa	IRGSP-1.0	0.070706	12.012955	ribo-seq	sheath_V2_stage_riboseq
SRR13808072	rice	oryza_sativa	IRGSP-1.0	0.070618	11.902339	ribo-seq	sheath_V2_stage_riboseq_2
SRR13808073	rice	oryza_sativa	IRGSP-1.0	0.069037	4.712493	ribo-seq	sheath_booting_stage_riboseq
SRR13808074	rice	oryza_sativa	IRGSP-1.0	0.070381	6.489809	ribo-seq	sheath_booting_stage_riboseq_2
SRR13808075	rice	oryza_sativa	IRGSP-1.0	0.071785	40.279649	ribo-seq	spikelet_booting_stage_riboseq
SRR13808076	rice	oryza_sativa	IRGSP-1.0	0.069043	10.103142	ribo-seq	spikelet_booting_stage_riboseq_2
SRR13808077	rice	oryza_sativa	IRGSP-1.0	0.06979	7.672262	ribo-seq	stem_booting_stage_riboseq
SRR13808078	rice	oryza_sativa	IRGSP-1.0	0.069362	4.901418	ribo-seq	stem_booting_stage_riboseq_2
SRR13808064	rice	oryza_sativa	IRGSP-1.0	0.071627	27.086045	ribo-seq	leaf_V2_stage_riboseq
SRR13808065	rice	oryza_sativa	IRGSP-1.0	0.071914	26.662721	ribo-seq	leaf_V2_stage_riboseq_2
SRR13808066	rice	oryza_sativa	IRGSP-1.0	0.071514	20.732646	ribo-seq	leaf_booting_stage_riboseq_2
SRX27799703	tomato	solanum_lycopersicum	SL3	0.122499	0.973243	ATAC-seq	fruit_0DPA_chromatin_accessibility
SRX27799731	tomato	solanum_lycopersicum	SL3	0.124092	0.528292	ATAC-seq	fruit_10DPA_chromatin_accessibility
SRX27799719	tomato	solanum_lycopersicum	SL3	0.126679	0.939164	ATAC-seq	fruit_3DPA_chromatin_accessibility
SRX27799727	tomato	solanum_lycopersicum	SL3	0.123217	0.575306	ATAC-seq	fruit_5DPA_chromatin_accessibility
SRX27799722	tomato	solanum_lycopersicum	SL3	0.130451	0.901007	ATAC-seq	fruit_3DBA_chromatin_accessibility
SRX27799718	tomato	solanum_lycopersicum	SL3	0.1215	0.998821	ATAC-seq	fruit_7DPA_chromatin_accessibility
SRX27799733	tomato	solanum_lycopersicum	SL3	0.126944	1.218157	ATAC-seq	leaf_chromatin_accessibility
SRX29291448	tomato	solanum_lycopersicum	SL3	0.179325	5.20255	RNA-seq	fruit_10DPA_MicroTom_gene_expression
SRX29291447	tomato	solanum_lycopersicum	SL3	0.179435	4.537181	RNA-seq	fruit_10DPA_MicroTom_gene_expression_2
SRX29291446	tomato	solanum_lycopersicum	SL3	0.179141	5.074057	RNA-seq	fruit_10DPA_MicroTom_gene_expression_3
SRX29291445	tomato	solanum_lycopersicum	SL3	0.179057	4.207061	RNA-seq	fruit_15DPA_Wild_LA1781_gene_expression
SRX29291444	tomato	solanum_lycopersicum	SL3	0.178674	3.702534	RNA-seq	fruit_5DPA_MicroTom_gene_expression
SRX29291443	tomato	solanum_lycopersicum	SL3	0.179159	3.709807	RNA-seq	fruit_5DPA_MicroTom_gene_expression_2
SRX29291442	tomato	solanum_lycopersicum	SL3	0.179013	4.089636	RNA-seq	fruit_15DPA_Wild_LA1781_gene_expression_2
SRX29291441	tomato	solanum_lycopersicum	SL3	0.178969	3.916207	RNA-seq	fruit_5DPA_MicroTom_gene_expression_3
SRX29291440	tomato	solanum_lycopersicum	SL3	0.179219	3.498594	RNA-seq	fruit_0DPA_MicroTom_gene_expression
SRX29291439	tomato	solanum_lycopersicum	SL3	0.179234	3.767797	RNA-seq	fruit_0DPA_MicroTom_gene_expression_2
SRX29291438	tomato	solanum_lycopersicum	SL3	0.179395	3.704499	RNA-seq	fruit_0DPA_MicroTom_gene_expression_3
SRX29291431	tomato	solanum_lycopersicum	SL3	0.178731	4.47911	RNA-seq	fruit_15DPA_MicroTom_gene_expression
SRX29291430	tomato	solanum_lycopersicum	SL3	0.179085	4.369213	RNA-seq	fruit_15DPA_MicroTom_gene_expression_2
ERR1464183	cattle	bos_taurus	ARS-UCD1.2	0.036415	1.464693	RNA-seq	spleen_gene_expression
ERR1464180	cattle	bos_taurus	ARS-UCD1.2	0.036336	0.973374	RNA-seq	left_lung_lobe_gene_expression
ERR1464175	cattle	bos_taurus	ARS-UCD1.2	0.031204	0.781589	RNA-seq	hypothalamus_gene_expression
ERR2664213	cattle	bos_taurus	ARS-UCD1.2	0.053686	1.936196	RNA-seq	CD8_gene_expression
ERR1464174	cattle	bos_taurus	ARS-UCD1.2	0.032213	0.675246	RNA-seq	frontal_cortex_gene_expression
SRX9176795	cattle	bos_taurus	ARS-UCD1.2	0.012844	0.046666	ATAC-seq	lung_chromatin_accessibility
ERX2628478	cattle	bos_taurus	ARS-UCD1.2	0.044621	0.086693	ATAC-seq	cd4_chromatin_accessibility
ERX2628481	cattle	bos_taurus	ARS-UCD1.2	0.043234	0.070464	ATAC-seq	cd8_chromatin_accessibility
SRX5649072	cattle	bos_taurus	ARS-UCD1.2	0.013623	0.089953	ATAC-seq	rumen_epithelial_cells_chromatin_accessibility
SRX9176799	cattle	bos_taurus	ARS-UCD1.2	0.013151	0.064995	ATAC-seq	skeletal_muscle_chromatin_accessibility
SRX9176803	cattle	bos_taurus	ARS-UCD1.2	0.012645	0.033455	ATAC-seq	spleen_chromatin_accessibility
SRX7703304	cattle	bos_taurus	ARS-UCD1.2	0.0423	0.088949	ATAC-seq	embryo_day_14_elongating_chromatin_accessibility
ERX5798621	cattle	bos_taurus	ARS-UCD1.2	0.075761	0.501603	Histone ChIP-seq	hypothalamus_H3K4Me3
ERX5798616	cattle	bos_taurus	ARS-UCD1.2	0.075545	0.323226	Histone ChIP-seq	frontal_cortex_H3K4Me3
ERX5798633	cattle	bos_taurus	ARS-UCD1.2	0.075315	0.383541	Histone ChIP-seq	semimembranosus_muscle_H3K4Me3
ERX4795023	cattle	bos_taurus	ARS-UCD1.2	0.038363	0.078103	Histone ChIP-seq	liver_H3K27Me3
ERX5798749	cattle	bos_taurus	ARS-UCD1.2	0.075362	0.274941	Histone ChIP-seq	semimembranosus_muscle_H3K4Me1
ERX4794967	cattle	bos_taurus	ARS-UCD1.2	0.04266	0.092549	Histone ChIP-seq	renal_medulla_H3K4Me1
ERX4795038	cattle	bos_taurus	ARS-UCD1.2	0.036119	0.186678	Histone ChIP-seq	mammary_gland_H3K27Ac
ERX5798687	cattle	bos_taurus	ARS-UCD1.2	0.075517	0.235065	Histone ChIP-seq	semimembranosus_muscle_H3K27Ac

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