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+ ---
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+ license: mit
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+ task_categories:
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+ - feature-extraction
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+ - sentence-similarity
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+ language:
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+ - en
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+ tags:
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+ - scientific-documents
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+ - long-context
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+ - retrieval
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+ - citation-context
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+ pretty_name: Body-Fact Retrieval (BFR) diagnostic
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+ size_categories:
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+ - 1K<n<10K
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+ ---
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+
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+ # Body-Fact Retrieval (BFR) diagnostic
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+
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+ A science-specific long-context retrieval probe released with **SciEmbed**
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+ (*Citation-Context Supervision for Scientific Document Embeddings*, Findings of
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+ EMNLP 2026). The task: given a sentence drawn from the **body** of a scientific
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+ paper that does not appear in its abstract, retrieve the source paper from a
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+ pool of full-text documents. Short-context encoders that only see the
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+ title+abstract are blind to the content that must be matched; long-context
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+ encoders that read the body can recover it, so the probe isolates whether a
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+ model's context window is actually exploited on scientific text.
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+
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+ ## Contents
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+
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+ - `candidates.parquet` — 9,749 candidate papers (`candidate_id`, `title`,
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+ `abstract`, `body`, `field_of_study`, `citation_count`).
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+ - `queries.parquet` — 1,000 body-sentence queries (`query_id`, `query_text`,
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+ `gold_candidate_id`).
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+
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+ ## Construction
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+
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+ - **Queries** are single sentences from the middle third of each paper
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+ (skipping intro/conclusion), 80–400 characters, with at most 0.2 trigram
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+ overlap against the paper's abstract so the abstract alone is not a shortcut.
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+ - **Leakage control.** Every candidate paper has a citation count in [1, 4],
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+ strictly below the citation_count ≥ 5 threshold used to build the SciEmbed
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+ Stage-2 (Signal A/B) training pool. No candidate was a training anchor,
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+ positive, or hard negative.
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+ - **Coverage.** Roughly 400 papers per field across ~24 S2AG disciplines
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+ (Computer Science, Mathematics, Physics, Biology, Medicine, Law, History,
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+ Philosophy, …). Bodies span ~11k–59k characters (5th–95th percentile).
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+
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+ ## Usage
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+
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+ Encode each query and each candidate (title + abstract + body, up to the
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+ model's context length), then retrieve by cosine similarity and report
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+ Recall@k. See the SciEmbed repository for the full evaluation harness and the
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+ robustness variants (same-field pool, Qwen3-paraphrased queries).
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+
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+ - Code: https://github.com/J0nasW/SciEmbed-release
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+ - Models: https://huggingface.co/J0nasW
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+
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+ ## Citation
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+
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+ ```bibtex
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+ @inproceedings{wilinski2026sciembed,
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+ title={SciEmbed: Citation-Context Supervision for Scientific Document Embeddings},
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+ author={Wilinski, Jonas and F{\"a}rber, Michael},
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+ booktitle={Findings of the Association for Computational Linguistics: EMNLP 2026},
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+ year={2026}
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+ }
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+ ```