remove psm

StarDist3D/nuclei_spheroid/config.json

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StarDist3D/{psm_stardist3D_ucl/weights_last.h5 → nuclei_spheroid/logs/images/events.out.tfevents.1688855758.jean-zay-visu2.367333.0.v2}

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StarDist3D/nuclei_spheroid/logs/images/events.out.tfevents.1688855859.jean-zay-visu2.367729.0.v2

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StarDist3D/nuclei_spheroid/logs/validation/events.out.tfevents.1688856025.jean-zay-visu2.367729.2.v2

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StarDist3D/nuclei_spheroid/weights_last.h5

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StarDist3D/psm_stardist3D_ucl/config.json

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-{"n_dim": 3, "axes": "ZYXC", "n_channel_in": 1, "n_channel_out": 97, "train_checkpoint": "/content/drive/My Drive/Models/human_breast_carcinoma_g2_s16.h5", "train_checkpoint_last": "weights_last.h5", "train_checkpoint_epoch": "weights_now.h5", "n_rays": 96, "grid": [1, 2, 2], "anisotropy": [3.92, 1.1395348837209303, 1.0], "backbone": "resnet", "rays_json": {"name": "Rays_GoldenSpiral", "kwargs": {"n": 96, "anisotropy": [3.92, 1.1395348837209303, 1.0]}}, "n_classes": null, "resnet_n_blocks": 3, "resnet_kernel_size": [3, 3, 3], "resnet_kernel_init": "he_normal", "resnet_n_filter_base": 16, "resnet_n_conv_per_block": 3, "resnet_activation": "relu", "resnet_batch_norm": false, "net_conv_after_resnet": 128, "net_input_shape": [null, null, null, 1], "net_mask_shape": [null, null, null, 1], "train_patch_size": [8, 128, 128], "train_background_reg": 0.0001, "train_foreground_only": 0.9, "train_sample_cache": true, "train_dist_loss": "mse", "train_loss_weights": [1, 0.2], "train_class_weights": [1, 1], "train_epochs": 150, "train_steps_per_epoch": 100, "train_learning_rate": 0.001, "train_batch_size": 1, "train_n_val_patches": null, "train_tensorboard": true, "train_reduce_lr": {"factor": 0.5, "patience": 40, "min_delta": 0}, "use_gpu": true}