FAME_benchmark / metadata /protocol_summary.json
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{
"summary": {
"zero_shot": {
"num_tasks": 21,
"support_examples_per_task": 0,
"query_file": "FAME_benchmark/episodes/zero_shot/<task>/test.jsonl"
},
"few_shot": {
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"support_examples_per_task": 10,
"seeds": [
0,
1,
2,
3,
4
],
"episode_file": "FAME_benchmark/episodes/k10_seed{0..4}/<task>/"
},
"ood": {
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"present_pairs": 12,
"support_examples_per_pair": 10,
"seed": 0,
"shift_types": [
"covariate",
"semantic"
]
},
"iid_source_datasets": 19,
"iid_matched_source_datasets": 19,
"iid_test_total": 14958,
"iid_test_positive": 13689,
"iid_test_negative": 1269
},
"iid_datasets": [
{
"source_dataset": "BraTS",
"release_dataset": "BraTS",
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"modality": "MRI",
"roi": "Brain tumor",
"test_total": 299,
"test_positive": 237,
"test_negative": 62,
"observed_total": 299,
"observed_positive": 237,
"observed_negative": 62,
"status": "match"
},
{
"source_dataset": "ISLES 2022",
"release_dataset": "ISLES-2022",
"anatomy": "Brain",
"modality": "MRI",
"roi": "Ischemic stroke lesion",
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"test_positive": 700,
"test_negative": 300,
"observed_total": 1000,
"observed_positive": 700,
"observed_negative": 300,
"status": "match"
},
{
"source_dataset": "BUID",
"release_dataset": "BUID",
"anatomy": "Breast",
"modality": "Ultrasound",
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"observed_total": 222,
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"status": "match"
},
{
"source_dataset": "BUSI",
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"status": "match"
},
{
"source_dataset": "CVC-ColonDB",
"release_dataset": "CVC_ColonDB",
"anatomy": "Colon",
"modality": "Colonoscopy",
"roi": "Colorectal polyp",
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"status": "match"
},
{
"source_dataset": "CVC-ClinicDB",
"release_dataset": "CVC_ClinicDB",
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"status": "match"
},
{
"source_dataset": "GlaS",
"release_dataset": "glas",
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"modality": "Histopathology",
"roi": "Colorectal gland",
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"status": "match"
},
{
"source_dataset": "Kvasir-SEG",
"release_dataset": "Kvasir-SEG",
"anatomy": "Colon",
"modality": "Colonoscopy",
"roi": "Colorectal polyp",
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"status": "match"
},
{
"source_dataset": "OIA-DDR",
"release_dataset": "DDR",
"anatomy": "Retina",
"modality": "Color fundus photography",
"roi": "DR-related lesions",
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},
{
"source_dataset": "CFP-PM-1203",
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"roi": "Pathologic myopia",
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"status": "match"
},
{
"source_dataset": "Retinal-Lesions",
"release_dataset": "retinal_lesions_dr",
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"status": "match"
},
{
"source_dataset": "RETOUCH",
"release_dataset": "RETOUCH",
"anatomy": "Retina",
"modality": "OCT B-scan",
"roi": "Retinal fluid",
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"status": "match"
},
{
"source_dataset": "COVID19-CT-Lesion",
"release_dataset": "COVID19_CT_Lesion",
"anatomy": "Lung",
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"observed_total": 999,
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"status": "match"
},
{
"source_dataset": "MosMedData",
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},
{
"source_dataset": "MSD Task06 Lung",
"release_dataset": "MSD_Task06_Lung",
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"roi": "Lung tumor",
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},
{
"source_dataset": "PH2",
"release_dataset": "PH2",
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"roi": "Melanocytic lesion",
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"status": "match"
},
{
"source_dataset": "ISIC 2018",
"release_dataset": "ISIC2018",
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"roi": "Skin lesion",
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"status": "match"
},
{
"source_dataset": "TG3K",
"release_dataset": "TG3K",
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"roi": "Thyroid gland",
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},
{
"source_dataset": "TN3K",
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"roi": "Thyroid nodule",
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"status": "match"
}
],
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"test_positive": "222",
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},
{
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},
{
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},
{
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},
{
"shift_type": "covariate",
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"test_positive": "747",
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},
{
"shift_type": "covariate",
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"test_total": "999",
"test_positive": "999",
"test_negative": "0"
},
{
"shift_type": "semantic",
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"test_total": "1000",
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},
{
"shift_type": "semantic",
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},
{
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},
{
"shift_type": "semantic",
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},
{
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},
{
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}
]
}