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local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-builder-fuzzbench/Dockerfile

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+# Copyright 2023 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+ARG IMG_TAG=latest
+FROM ghcr.io/aixcc-finals/base-builder:${IMG_TAG}
+
+# Copy/Run this now to make the cache more resilient.
+COPY fuzzbench_install_dependencies /usr/local/bin
+RUN fuzzbench_install_dependencies
+
+ENV OSS_FUZZ_ON_DEMAND=1
+
+COPY fuzzbench_build fuzzbench_run_fuzzer fuzzbench_measure /usr/local/bin/

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-builder-fuzzbench/fuzzbench_build

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+#! /bin/bash -eux
+# Copyright 2023 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+# TODO(metzman): Do this in a docket image so we don't need to waste time
+# reinstalling.
+PYTHONPATH=$FUZZBENCH_PATH python3 -B -u -c "from fuzzers.$FUZZING_ENGINE import fuzzer; fuzzer.build()"
+
+if [ "$FUZZING_ENGINE" = "coverage" ]; then
+  cd $OUT
+  mkdir -p filestore/oss-fuzz-on-demand/coverage-binaries
+  # We expect an error regarding leading slashes. Just assume this step succeeds.
+  # TODO(metzman): Fix this when I get a chance.
+  tar -czvf filestore/oss-fuzz-on-demand/coverage-binaries/coverage-build-$PROJECT.tar.gz * /src /work || exit 0
+fi

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-builder-fuzzbench/fuzzbench_install_dependencies

@@ -0,0 +1,22 @@
+#! /bin/bash -eux
+# Copyright 2023 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+apt-get update && apt-get install -y gcc gfortran python-dev libopenblas-dev liblapack-dev cython libpq-dev
+wget -O /tmp/requirements.txt https://raw.githubusercontent.com/google/fuzzbench/master/requirements.txt
+pip3 install pip --upgrade
+CFLAGS= CXXFLAGS= pip3 install -r /tmp/requirements.txt
+rm /tmp/requirements.txt

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-builder-fuzzbench/fuzzbench_measure

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+#! /bin/bash -eux
+# Copyright 2023 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+# TODO(metzman): Make these configurable.
+export DB_PATH=$OUT/experiment.db
+export SNAPSHOT_PERIOD=30
+export EXPERIMENT_FILESTORE=$OUT/filestore
+export MAX_TOTAL_TIME=120
+export EXPERIMENT=oss-fuzz-on-demand
+
+rm -f $DB_PATH
+
+# FUZZER=mopt BENCHMARK=skcms
+
+export SQL_DATABASE_URL=sqlite:///$DB_PATH
+
+cd $FUZZBENCH_PATH
+PYTHONPATH=. python3 -B experiment/measurer/standalone.py $MAX_TOTAL_TIME

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-builder-fuzzbench/fuzzbench_run_fuzzer

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+#! /bin/bash -eux
+# Copyright 2023 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+export RUNNER_NICENESS="-5"
+export EXPERIMENT_FILESTORE=$OUT/filestore
+export EXPERIMENT=oss-fuzz-on-demand
+export OSS_FUZZ_ON_DEMAND=1
+export OUTPUT_CORPUS_DIR=/output-corpus
+export SEED_CORPUS_DIR=/input-corpus
+mkdir $SEED_CORPUS_DIR
+rm -rf $OUTPUT_CORPUS_DIR
+mkdir $OUTPUT_CORPUS_DIR
+export FUZZER=$FUZZING_ENGINE
+# TODO(metzman): Make this configurable.
+export MAX_TOTAL_TIME=120
+export SNAPSHOT_PERIOD=30
+export TRIAL_ID=1
+export FORCE_LOCAL=1
+
+# BENCHMARK, FUZZ_TARGET
+cd $OUT
+
+# Prevent permissions issues with pyc files and docker.
+cp -r $FUZZBENCH_PATH /tmp/fuzzbench
+
+PYTHONPATH=/tmp/fuzzbench nice -n $RUNNER_NICENESS python3 -B -u /tmp/fuzzbench/experiment/runner.py
+cat $EXPERIMENT_FILESTORE/$EXPERIMENT/experiment-folders/$BENCHMARK-$FUZZER/trial-$TRIAL_ID/results/fuzzer-log.txt

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-builder-go/Dockerfile

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+# Copyright 2021 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+ARG IMG_TAG=latest
+FROM ghcr.io/aixcc-finals/base-builder:${IMG_TAG}
+
+# Set up Golang environment variables (copied from /root/.bash_profile).
+ENV GOPATH /root/go
+
+# /root/.go/bin is for the standard Go binaries (i.e. go, gofmt, etc).
+# $GOPATH/bin is for the binaries from the dependencies installed via "go get".
+ENV PATH $PATH:/root/.go/bin:$GOPATH/bin
+
+COPY gosigfuzz.c $GOPATH/gosigfuzz/
+
+RUN install_go.sh
+
+# TODO(jonathanmetzman): Install this file using install_go.sh.
+COPY ossfuzz_coverage_runner.go \
+     $GOPATH/

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-image/Dockerfile

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+# Copyright 2016 Google Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+# Base image for all other images.
+
+ARG parent_image=ubuntu:20.04@sha256:4a45212e9518f35983a976eead0de5eecc555a2f047134e9dd2cfc589076a00d
+
+FROM $parent_image
+
+ENV DEBIAN_FRONTEND noninteractive
+# Install tzadata to match ClusterFuzz
+# (https://github.com/google/oss-fuzz/issues/9280).
+
+# Use Azure mirrors for consistent apt repository access.
+RUN cp /etc/apt/sources.list /etc/apt/sources.list.backup && \
+    sed -i 's|http://archive.ubuntu.com/ubuntu/|http://azure.archive.ubuntu.com/ubuntu/|g' /etc/apt/sources.list && \
+    sed -i 's|http://security.ubuntu.com/ubuntu/|http://azure.archive.ubuntu.com/ubuntu/|g' /etc/apt/sources.list
+
+
+RUN apt-get update && \
+    apt-get upgrade -y && \
+    apt-get install -y libc6-dev binutils libgcc-9-dev tzdata locales locales-all && \
+    apt-get autoremove -y
+
+ENV OUT=/out
+ENV SRC=/src
+ENV WORK=/work
+ENV PATH="$PATH:/out"
+ENV HWASAN_OPTIONS=random_tags=0
+#set locale to utf8
+ENV LC_ALL=C.UTF-8
+
+RUN mkdir -p $OUT $SRC $WORK && chmod a+rwx $OUT $SRC $WORK

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/Dockerfile

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+# Copyright 2016 Google Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+# Build rust stuff in its own image. We only need the resulting binaries.
+# Keeping the rust toolchain in the image wastes 1 GB.
+ARG IMG_TAG=latest
+FROM ghcr.io/aixcc-finals/base-image:${IMG_TAG} as temp-runner-binary-builder
+
+RUN apt-get update && apt-get install -y cargo libyaml-dev
+RUN cargo install rustfilt
+
+# Using multi-stage build to copy some LLVM binaries needed in the runner image.
+FROM ghcr.io/aixcc-finals/base-clang:${IMG_TAG} AS base-clang
+FROM ghcr.io/aixcc-finals/base-builder-ruby:${IMG_TAG} AS base-ruby
+
+# The base builder image compiles a specific Python version. Using a multi-stage build
+# to copy that same Python interpreter into the runner image saves build time and keeps
+# the Python versions in sync.
+FROM ghcr.io/aixcc-finals/base-builder:${IMG_TAG} AS base-builder
+
+# Real image that will be used later.
+FROM ghcr.io/aixcc-finals/base-image:${IMG_TAG}
+
+COPY --from=temp-runner-binary-builder /root/.cargo/bin/rustfilt /usr/local/bin
+
+# Copy the binaries needed for code coverage and crash symbolization.
+COPY --from=base-clang /usr/local/bin/llvm-cov \
+     /usr/local/bin/llvm-profdata \
+     /usr/local/bin/llvm-symbolizer \
+     /usr/local/bin/
+
+# Copy the pre-compiled Python binaries and libraries
+COPY --from=base-builder /usr/local/bin/python3.10 /usr/local/bin/python3.10
+COPY --from=base-builder /usr/local/lib/libpython3.10.so.1.0 /usr/local/lib/libpython3.10.so.1.0
+COPY --from=base-builder /usr/local/include/python3.10 /usr/local/include/python3.10
+COPY --from=base-builder /usr/local/lib/python3.10 /usr/local/lib/python3.10
+COPY --from=base-builder /usr/local/bin/pip3 /usr/local/bin/pip3
+
+# Create symbolic links to ensure compatibility
+RUN ldconfig && \
+    ln -s /usr/local/bin/python3.10 /usr/local/bin/python3 && \
+    ln -s /usr/local/bin/python3.10 /usr/local/bin/python
+
+COPY install_deps.sh /
+RUN /install_deps.sh && rm /install_deps.sh
+
+ENV CODE_COVERAGE_SRC=/opt/code_coverage
+# Pin coverage to the same as in the base builder:
+# https://github.com/google/oss-fuzz/blob/master/infra/base-images/base-builder/install_python.sh#L22
+RUN git clone https://chromium.googlesource.com/chromium/src/tools/code_coverage $CODE_COVERAGE_SRC && \
+    cd /opt/code_coverage && \
+    git checkout edba4873b5e8a390e977a64c522db2df18a8b27d && \
+    pip3 install wheel && \
+    # If version "Jinja2==2.10" is in requirements.txt, bump it to a patch version that
+    # supports upgrading its MarkupSafe dependency to a Python 3.10 compatible release:
+    sed -i 's/Jinja2==2.10/Jinja2==2.10.3/' requirements.txt && \
+    pip3 install -r requirements.txt && \
+    pip3 install MarkupSafe==2.0.1 && \
+    pip3 install coverage==6.3.2
+
+# Default environment options for various sanitizers.
+# Note that these match the settings used in ClusterFuzz and
+# shouldn't be changed unless a corresponding change is made on
+# ClusterFuzz side as well.
+ENV ASAN_OPTIONS="alloc_dealloc_mismatch=0:allocator_may_return_null=1:allocator_release_to_os_interval_ms=500:check_malloc_usable_size=0:detect_container_overflow=1:detect_odr_violation=0:detect_leaks=1:detect_stack_use_after_return=1:fast_unwind_on_fatal=0:handle_abort=1:handle_segv=1:handle_sigill=1:max_uar_stack_size_log=16:print_scariness=1:quarantine_size_mb=10:strict_memcmp=1:strip_path_prefix=/workspace/:symbolize=1:use_sigaltstack=1:dedup_token_length=3"
+ENV MSAN_OPTIONS="print_stats=1:strip_path_prefix=/workspace/:symbolize=1:dedup_token_length=3"
+ENV UBSAN_OPTIONS="print_stacktrace=1:print_summary=1:silence_unsigned_overflow=1:strip_path_prefix=/workspace/:symbolize=1:dedup_token_length=3"
+ENV FUZZER_ARGS="-rss_limit_mb=2560 -timeout=25"
+ENV AFL_FUZZER_ARGS="-m none"
+
+# Set up Golang environment variables (copied from /root/.bash_profile).
+ENV GOPATH /root/go
+
+# /root/.go/bin is for the standard Go binaries (i.e. go, gofmt, etc).
+# $GOPATH/bin is for the binaries from the dependencies installed via "go get".
+ENV PATH $PATH:$GOPATH/bin
+COPY gocoverage $GOPATH/gocoverage
+
+COPY install_go.sh /
+RUN /install_go.sh && rm -rf /install_go.sh /root/.go
+
+# Install OpenJDK 15 and trim its size by removing unused components.
+ENV JAVA_HOME=/usr/lib/jvm/java-17-openjdk-amd64
+ENV JAVA_15_HOME=/usr/lib/jvm/java-15-openjdk-amd64
+ENV JVM_LD_LIBRARY_PATH=$JAVA_HOME/lib/server
+ENV PATH=$PATH:$JAVA_HOME/bin
+
+COPY install_java.sh /
+RUN /install_java.sh && rm /install_java.sh
+
+# Install JaCoCo for JVM coverage.
+RUN wget https://repo1.maven.org/maven2/org/jacoco/org.jacoco.cli/0.8.7/org.jacoco.cli-0.8.7-nodeps.jar -O /opt/jacoco-cli.jar && \
+    wget https://repo1.maven.org/maven2/org/jacoco/org.jacoco.agent/0.8.7/org.jacoco.agent-0.8.7-runtime.jar -O /opt/jacoco-agent.jar && \
+    echo "37df187b76888101ecd745282e9cd1ad4ea508d6  /opt/jacoco-agent.jar" | shasum --check && \
+    echo "c1814e7bba5fd8786224b09b43c84fd6156db690  /opt/jacoco-cli.jar" | shasum --check
+
+COPY install_javascript.sh /
+RUN /install_javascript.sh && rm /install_javascript.sh
+
+# Copy built ruby and ruzzy from builder
+COPY --from=base-ruby /usr/local/rvm /usr/local/rvm
+COPY --from=base-ruby /install/ruzzy /install/ruzzy
+COPY ruzzy /usr/bin/ruzzy
+ENV PATH="$PATH:/usr/local/rvm/rubies/ruby-3.3.1/bin"
+# RubyGems installation directory
+ENV GEM_HOME="$OUT/fuzz-gem"
+ENV GEM_PATH="/install/ruzzy"
+
+# Do this last to make developing these files easier/faster due to caching.
+COPY bad_build_check \
+    coverage \
+    coverage_helper \
+    download_corpus \
+    jacoco_report_converter.py \
+    nyc_report_converter.py \
+    rcfilt \
+    reproduce \
+    run_fuzzer \
+    parse_options.py \
+    generate_differential_cov_report.py \
+    profraw_update.py \
+    targets_list \
+    test_all.py \
+    test_one.py \
+    python_coverage_runner_help.py \
+    /usr/local/bin/

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/bad_build_check

@@ -0,0 +1,494 @@
+#!/bin/bash -u
+# Copyright 2017 Google Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+# A minimal number of runs to test fuzz target with a non-empty input.
+MIN_NUMBER_OF_RUNS=4
+
+# The "example" target has 73 with ASan, 65 with UBSan, and 6648 with MSan.
+# Real world targets have greater values (arduinojson: 407, zlib: 664).
+# Mercurial's bdiff_fuzzer has 116 PCs when built with ASan.
+THRESHOLD_FOR_NUMBER_OF_EDGES=100
+
+# A fuzz target is supposed to have at least two functions, such as
+# LLVMFuzzerTestOneInput and an API that is being called from there.
+THRESHOLD_FOR_NUMBER_OF_FUNCTIONS=2
+
+# Threshold values for different sanitizers used by instrumentation checks.
+ASAN_CALLS_THRESHOLD_FOR_ASAN_BUILD=1000
+ASAN_CALLS_THRESHOLD_FOR_NON_ASAN_BUILD=0
+
+# The value below can definitely be higher (like 500-1000), but avoid being too
+# agressive here while still evaluating the DFT-based fuzzing approach.
+DFSAN_CALLS_THRESHOLD_FOR_DFSAN_BUILD=100
+DFSAN_CALLS_THRESHOLD_FOR_NON_DFSAN_BUILD=0
+
+MSAN_CALLS_THRESHOLD_FOR_MSAN_BUILD=1000
+# Some engines (e.g. honggfuzz) may make a very small number of calls to msan
+# for memory poisoning.
+MSAN_CALLS_THRESHOLD_FOR_NON_MSAN_BUILD=3
+
+# Usually, a non UBSan build (e.g. ASan) has 165 calls to UBSan runtime. The
+# majority of targets built with UBSan have 200+ UBSan calls, but there are
+# some very small targets that may have < 200 UBSan calls even in a UBSan build.
+# Use the threshold value of 168 (slightly > 165) for UBSan build.
+UBSAN_CALLS_THRESHOLD_FOR_UBSAN_BUILD=168
+
+# It would be risky to use the threshold value close to 165 for non UBSan build,
+# as UBSan runtime may change any time and thus we could have different number
+# of calls to UBSan runtime even in ASan build. With that, we use the threshold
+# value of 200 that would detect unnecessary UBSan instrumentation in the vast
+# majority of targets, except of a handful very small ones, which would not be
+# a big concern either way as the overhead for them would not be significant.
+UBSAN_CALLS_THRESHOLD_FOR_NON_UBSAN_BUILD=200
+
+# ASan builds on i386 generally have about 250 UBSan runtime calls.
+if [[ $ARCHITECTURE == 'i386' ]]
+then
+  UBSAN_CALLS_THRESHOLD_FOR_NON_UBSAN_BUILD=280
+fi
+
+
+# Verify that the given fuzz target is correctly built to run with a particular
+# engine.
+function check_engine {
+  local FUZZER=$1
+  local FUZZER_NAME=$(basename $FUZZER)
+  local FUZZER_OUTPUT="/tmp/$FUZZER_NAME.output"
+  local CHECK_FAILED=0
+
+  if [[ "$FUZZING_ENGINE" == libfuzzer ]]; then
+    # Store fuzz target's output into a temp file to be used for further checks.
+    $FUZZER -seed=1337 -runs=$MIN_NUMBER_OF_RUNS &>$FUZZER_OUTPUT
+    CHECK_FAILED=$(egrep "ERROR: no interesting inputs were found. Is the code instrumented" -c $FUZZER_OUTPUT)
+    if (( $CHECK_FAILED > 0 )); then
+      echo "BAD BUILD: $FUZZER does not seem to have coverage instrumentation."
+      cat $FUZZER_OUTPUT
+      # Bail out as the further check does not make any sense, there are 0 PCs.
+      return 1
+    fi
+
+    local NUMBER_OF_EDGES=$(grep -Po "INFO: Loaded [[:digit:]]+ module.*\(.*(counters|guards)\):[[:space:]]+\K[[:digit:]]+" $FUZZER_OUTPUT)
+
+    # If a fuzz target fails to start, grep won't find anything, so bail out early to let check_startup_crash deal with it.
+    [[ -z "$NUMBER_OF_EDGES" ]] && return
+
+    if (( $NUMBER_OF_EDGES < $THRESHOLD_FOR_NUMBER_OF_EDGES )); then
+      echo "BAD BUILD: $FUZZER seems to have only partial coverage instrumentation."
+    fi
+  elif [[ "$FUZZING_ENGINE" == afl ]]; then
+    AFL_FORKSRV_INIT_TMOUT=30000 AFL_NO_UI=1 SKIP_SEED_CORPUS=1 timeout --preserve-status -s INT 35s run_fuzzer $FUZZER_NAME &>$FUZZER_OUTPUT
+    CHECK_PASSED=$(egrep "All set and ready to roll" -c $FUZZER_OUTPUT)
+    if (( $CHECK_PASSED == 0 )); then
+      echo "BAD BUILD: fuzzing $FUZZER with afl-fuzz failed."
+      cat $FUZZER_OUTPUT
+      return 1
+    fi
+  elif [[ "$FUZZING_ENGINE" == honggfuzz ]]; then
+    SKIP_SEED_CORPUS=1 timeout --preserve-status -s INT 20s run_fuzzer $FUZZER_NAME &>$FUZZER_OUTPUT
+    CHECK_PASSED=$(egrep "^Sz:[0-9]+ Tm:[0-9]+" -c $FUZZER_OUTPUT)
+    if (( $CHECK_PASSED == 0 )); then
+      echo "BAD BUILD: fuzzing $FUZZER with honggfuzz failed."
+      cat $FUZZER_OUTPUT
+      return 1
+    fi
+  elif [[ "$FUZZING_ENGINE" == dataflow ]]; then
+    $FUZZER &> $FUZZER_OUTPUT
+    local NUMBER_OF_FUNCTIONS=$(grep -Po "INFO:\s+\K[[:digit:]]+(?=\s+instrumented function.*)" $FUZZER_OUTPUT)
+    [[ -z "$NUMBER_OF_FUNCTIONS" ]] && NUMBER_OF_FUNCTIONS=0
+    if (( $NUMBER_OF_FUNCTIONS < $THRESHOLD_FOR_NUMBER_OF_FUNCTIONS )); then
+      echo "BAD BUILD: $FUZZER does not seem to be properly built in 'dataflow' config."
+      cat $FUZZER_OUTPUT
+      return 1
+    fi
+  elif [[ "$FUZZING_ENGINE" == centipede \
+          && ("${HELPER:-}" == True || "$SANITIZER" == none ) ]]; then
+    # Performs run test on unsanitized binaries with auxiliary sanitized
+    # binaries if they are built with helper.py.
+    # Performs run test on unsanitized binaries without auxiliary sanitized
+    # binaries if they are from trial build and production build.
+    # TODO(Dongge): Support run test with sanitized binaries for trial and
+    # production build.
+    SKIP_SEED_CORPUS=1 timeout --preserve-status -s INT 20s run_fuzzer $FUZZER_NAME &>$FUZZER_OUTPUT
+    CHECK_PASSED=$(egrep "\[S0.0] begin-fuzz: ft: 0 corp: 0/0" -c $FUZZER_OUTPUT)
+    if (( $CHECK_PASSED == 0 )); then
+      echo "BAD BUILD: fuzzing $FUZZER with centipede failed."
+      cat $FUZZER_OUTPUT
+      return 1
+    fi
+  fi
+  
+  return 0
+}
+
+# Verify that the given fuzz target has been built properly and works.
+function check_startup_crash {
+  local FUZZER=$1
+  local FUZZER_NAME=$(basename $FUZZER)
+  local FUZZER_OUTPUT="/tmp/$FUZZER_NAME.output"
+  local CHECK_PASSED=0
+
+  if [[ "$FUZZING_ENGINE" = libfuzzer ]]; then
+    # Skip seed corpus as there is another explicit check that uses seed corpora.
+    SKIP_SEED_CORPUS=1 run_fuzzer $FUZZER_NAME -seed=1337 -runs=$MIN_NUMBER_OF_RUNS &>$FUZZER_OUTPUT
+    CHECK_PASSED=$(egrep "Done $MIN_NUMBER_OF_RUNS runs" -c $FUZZER_OUTPUT)
+  elif [[ "$FUZZING_ENGINE" = afl ]]; then
+    AFL_FORKSRV_INIT_TMOUT=30000 AFL_NO_UI=1 SKIP_SEED_CORPUS=1 timeout --preserve-status -s INT 35s run_fuzzer $FUZZER_NAME &>$FUZZER_OUTPUT
+    if [ $(egrep "target binary (crashed|terminated)" -c $FUZZER_OUTPUT) -eq 0 ]; then
+      CHECK_PASSED=1
+    fi
+  elif [[ "$FUZZING_ENGINE" = dataflow ]]; then
+    # TODO(https://github.com/google/oss-fuzz/issues/1632): add check for
+    # binaries compiled with dataflow engine when the interface becomes stable.
+    CHECK_PASSED=1
+  else
+    # TODO: add checks for another fuzzing engines if possible.
+    CHECK_PASSED=1
+  fi
+
+  if [ "$CHECK_PASSED" -eq "0" ]; then
+    echo "BAD BUILD: $FUZZER seems to have either startup crash or exit:"
+    cat $FUZZER_OUTPUT
+    return 1
+  fi
+
+  return 0
+}
+
+# Mixed sanitizers check for ASan build.
+function check_asan_build {
+  local FUZZER=$1
+  local ASAN_CALLS=$2
+  local DFSAN_CALLS=$3
+  local MSAN_CALLS=$4
+  local UBSAN_CALLS=$5
+
+  # Perform all the checks for more detailed error message.
+  if (( $ASAN_CALLS < $ASAN_CALLS_THRESHOLD_FOR_ASAN_BUILD )); then
+    echo "BAD BUILD: $FUZZER does not seem to be compiled with ASan."
+    return 1
+  fi
+
+  if (( $DFSAN_CALLS > $DFSAN_CALLS_THRESHOLD_FOR_NON_DFSAN_BUILD )); then
+    echo "BAD BUILD: ASan build of $FUZZER seems to be compiled with DFSan."
+    return 1
+  fi
+
+  if (( $MSAN_CALLS > $MSAN_CALLS_THRESHOLD_FOR_NON_MSAN_BUILD )); then
+    echo "BAD BUILD: ASan build of $FUZZER seems to be compiled with MSan."
+    return 1
+  fi
+
+  if (( $UBSAN_CALLS > $UBSAN_CALLS_THRESHOLD_FOR_NON_UBSAN_BUILD )); then
+    echo "BAD BUILD: ASan build of $FUZZER seems to be compiled with UBSan."
+    return 1
+  fi
+
+  return 0
+}
+
+# Mixed sanitizers check for DFSan build.
+function check_dfsan_build {
+  local FUZZER=$1
+  local ASAN_CALLS=$2
+  local DFSAN_CALLS=$3
+  local MSAN_CALLS=$4
+  local UBSAN_CALLS=$5
+
+  # Perform all the checks for more detailed error message.
+  if (( $ASAN_CALLS > $ASAN_CALLS_THRESHOLD_FOR_NON_ASAN_BUILD )); then
+    echo "BAD BUILD: DFSan build of $FUZZER seems to be compiled with ASan."
+    return 1
+  fi
+
+  if (( $DFSAN_CALLS < $DFSAN_CALLS_THRESHOLD_FOR_DFSAN_BUILD )); then
+    echo "BAD BUILD: $FUZZER does not seem to be compiled with DFSan."
+    return 1
+  fi
+
+  if (( $MSAN_CALLS > $MSAN_CALLS_THRESHOLD_FOR_NON_MSAN_BUILD )); then
+    echo "BAD BUILD: ASan build of $FUZZER seems to be compiled with MSan."
+    return 1
+  fi
+
+  if (( $UBSAN_CALLS > $UBSAN_CALLS_THRESHOLD_FOR_NON_UBSAN_BUILD )); then
+    echo "BAD BUILD: ASan build of $FUZZER seems to be compiled with UBSan."
+    return 1
+  fi
+
+  return 0
+}
+
+
+# Mixed sanitizers check for MSan build.
+function check_msan_build {
+  local FUZZER=$1
+  local ASAN_CALLS=$2
+  local DFSAN_CALLS=$3
+  local MSAN_CALLS=$4
+  local UBSAN_CALLS=$5
+
+  # Perform all the checks for more detailed error message.
+  if (( $ASAN_CALLS > $ASAN_CALLS_THRESHOLD_FOR_NON_ASAN_BUILD )); then
+    echo "BAD BUILD: MSan build of $FUZZER seems to be compiled with ASan."
+    return 1
+  fi
+
+  if (( $DFSAN_CALLS > $DFSAN_CALLS_THRESHOLD_FOR_NON_DFSAN_BUILD )); then
+    echo "BAD BUILD: MSan build of $FUZZER seems to be compiled with DFSan."
+    return 1
+  fi
+
+  if (( $MSAN_CALLS < $MSAN_CALLS_THRESHOLD_FOR_MSAN_BUILD )); then
+    echo "BAD BUILD: $FUZZER does not seem to be compiled with MSan."
+    return 1
+  fi
+
+  if (( $UBSAN_CALLS > $UBSAN_CALLS_THRESHOLD_FOR_NON_UBSAN_BUILD )); then
+    echo "BAD BUILD: MSan build of $FUZZER seems to be compiled with UBSan."
+    return 1
+  fi
+
+  return 0
+}
+
+# Mixed sanitizers check for UBSan build.
+function check_ubsan_build {
+  local FUZZER=$1
+  local ASAN_CALLS=$2
+  local DFSAN_CALLS=$3
+  local MSAN_CALLS=$4
+  local UBSAN_CALLS=$5
+
+  if [[ "$FUZZING_ENGINE" != libfuzzer ]]; then
+    # Ignore UBSan checks for fuzzing engines other than libFuzzer because:
+    # A) we (probably) are not going to use those with UBSan
+    # B) such builds show indistinguishable number of calls to UBSan
+    return 0
+  fi
+
+  # Perform all the checks for more detailed error message.
+  if (( $ASAN_CALLS > $ASAN_CALLS_THRESHOLD_FOR_NON_ASAN_BUILD )); then
+    echo "BAD BUILD: UBSan build of $FUZZER seems to be compiled with ASan."
+    return 1
+  fi
+
+  if (( $DFSAN_CALLS > $DFSAN_CALLS_THRESHOLD_FOR_NON_DFSAN_BUILD )); then
+    echo "BAD BUILD: UBSan build of $FUZZER seems to be compiled with DFSan."
+    return 1
+  fi
+
+  if (( $MSAN_CALLS > $MSAN_CALLS_THRESHOLD_FOR_NON_MSAN_BUILD )); then
+    echo "BAD BUILD: UBSan build of $FUZZER seems to be compiled with MSan."
+    return 1
+  fi
+
+  if (( $UBSAN_CALLS < $UBSAN_CALLS_THRESHOLD_FOR_UBSAN_BUILD )); then
+    echo "BAD BUILD: $FUZZER does not seem to be compiled with UBSan."
+    return 1
+  fi
+}
+
+# Verify that the given fuzz target is compiled with correct sanitizer.
+function check_mixed_sanitizers {
+  local FUZZER=$1
+  local result=0
+  local CALL_INSN=
+
+  if [ "${FUZZING_LANGUAGE:-}" = "jvm" ]; then
+    # Sanitizer runtime is linked into the Jazzer driver, so this check does not
+    # apply.
+    return 0
+  fi
+
+  if [ "${FUZZING_LANGUAGE:-}" = "javascript" ]; then
+    # Jazzer.js currently does not support using sanitizers with native Node.js addons.
+    # This is not relevant anyways since supporting this will be done by preloading
+    # the sanitizers in the wrapper script starting Jazzer.js.
+    return 0
+  fi
+
+  if [ "${FUZZING_LANGUAGE:-}" = "python" ]; then
+    # Sanitizer runtime is loaded via LD_PRELOAD, so this check does not apply.
+    return 0
+  fi
+
+  # For fuzztest fuzzers point to the binary instead of launcher script.
+  if [[ $FUZZER == *"@"* ]]; then
+    FUZZER=(${FUZZER//@/ }[0])
+  fi
+
+  CALL_INSN=
+  if [[ $ARCHITECTURE == "x86_64" ]]
+  then
+    CALL_INSN="callq?\s+[0-9a-f]+\s+<"
+  elif [[ $ARCHITECTURE == "i386" ]]
+  then
+    CALL_INSN="call\s+[0-9a-f]+\s+<"
+  elif [[ $ARCHITECTURE == "aarch64" ]]
+  then
+    CALL_INSN="bl\s+[0-9a-f]+\s+<"
+  else
+    echo "UNSUPPORTED ARCHITECTURE"
+    exit 1
+  fi
+  local ASAN_CALLS=$(objdump -dC $FUZZER | egrep "${CALL_INSN}__asan" -c)
+  local DFSAN_CALLS=$(objdump -dC $FUZZER | egrep "${CALL_INSN}__dfsan" -c)
+  local MSAN_CALLS=$(objdump -dC $FUZZER | egrep "${CALL_INSN}__msan" -c)
+  local UBSAN_CALLS=$(objdump -dC $FUZZER | egrep "${CALL_INSN}__ubsan" -c)
+
+
+  if [[ "$SANITIZER" = address ]]; then
+    check_asan_build $FUZZER $ASAN_CALLS $DFSAN_CALLS $MSAN_CALLS $UBSAN_CALLS
+    result=$?
+  elif [[ "$SANITIZER" = dataflow ]]; then
+    check_dfsan_build $FUZZER $ASAN_CALLS $DFSAN_CALLS $MSAN_CALLS $UBSAN_CALLS
+    result=$?
+  elif [[ "$SANITIZER" = memory ]]; then
+    check_msan_build $FUZZER $ASAN_CALLS $DFSAN_CALLS $MSAN_CALLS $UBSAN_CALLS
+    result=$?
+  elif [[ "$SANITIZER" = undefined ]]; then
+    check_ubsan_build $FUZZER $ASAN_CALLS $DFSAN_CALLS $MSAN_CALLS $UBSAN_CALLS
+    result=$?
+  elif [[ "$SANITIZER" = thread ]]; then
+    # TODO(metzman): Implement this.
+    result=0
+  fi
+
+  return $result
+}
+
+# Verify that the given fuzz target doesn't crash on the seed corpus.
+function check_seed_corpus {
+  local FUZZER=$1
+  local FUZZER_NAME="$(basename $FUZZER)"
+  local FUZZER_OUTPUT="/tmp/$FUZZER_NAME.output"
+
+  if [[ "$FUZZING_ENGINE" != libfuzzer ]]; then
+    return 0
+  fi
+
+  # Set up common fuzzing arguments, otherwise "run_fuzzer" errors out.
+  if [ -z "$FUZZER_ARGS" ]; then
+    export FUZZER_ARGS="-rss_limit_mb=2560 -timeout=25"
+  fi
+
+  bash -c "run_fuzzer $FUZZER_NAME -runs=0" &> $FUZZER_OUTPUT
+
+  # Don't output anything if fuzz target hasn't crashed.
+  if [ $? -ne 0 ]; then
+    echo "BAD BUILD: $FUZZER has a crashing input in its seed corpus:"
+    cat $FUZZER_OUTPUT
+    return 1
+  fi
+
+  return 0
+}
+
+function check_architecture {
+  local FUZZER=$1
+  local FUZZER_NAME=$(basename $FUZZER)
+
+  if [ "${FUZZING_LANGUAGE:-}" = "jvm" ]; then
+    # The native dependencies of a JVM project are not packaged, but loaded
+    # dynamically at runtime and thus cannot be checked here.
+    return 0;
+  fi
+
+  if [ "${FUZZING_LANGUAGE:-}" = "javascript" ]; then
+    # Jazzer.js fuzzers are wrapper scripts that start the fuzz target with
+    # the Jazzer.js CLI.
+    return 0;
+  fi
+
+  if [ "${FUZZING_LANGUAGE:-}" = "python" ]; then
+    FUZZER=${FUZZER}.pkg
+  fi
+
+  # For fuzztest fuzzers point to the binary instead of launcher script.
+  if [[ $FUZZER == *"@"* ]]; then
+    FUZZER=(${FUZZER//@/ }[0])
+  fi
+
+  FILE_OUTPUT=$(file $FUZZER)
+  if [[ $ARCHITECTURE == "x86_64" ]]
+  then
+    echo $FILE_OUTPUT | grep "x86-64" > /dev/null
+  elif [[ $ARCHITECTURE == "i386" ]]
+  then
+    echo $FILE_OUTPUT | grep "80386" > /dev/null
+  elif [[ $ARCHITECTURE == "aarch64" ]]
+  then
+    echo $FILE_OUTPUT | grep "aarch64" > /dev/null
+  else
+    echo "UNSUPPORTED ARCHITECTURE"
+    return 1
+  fi
+  result=$?
+  if [[ $result != 0 ]]
+  then
+    echo "BAD BUILD $FUZZER is not built for architecture: $ARCHITECTURE"
+    echo "file command output: $FILE_OUTPUT"
+    echo "check_mixed_sanitizers test will fail."
+  fi
+  return $result
+}
+
+function main {
+  local FUZZER=$1
+  local AUXILIARY_FUZZER=${2:-}
+  local checks_failed=0
+  local result=0
+
+  export RUN_FUZZER_MODE="batch"
+  check_engine $FUZZER
+  result=$?
+  checks_failed=$(( $checks_failed + $result ))
+
+  check_architecture $FUZZER
+  result=$?
+  checks_failed=$(( $checks_failed + $result ))
+
+  if [[ "$FUZZING_ENGINE" == centipede \
+        && "$SANITIZER" != none && "${HELPER:-}" == True ]]; then
+    check_mixed_sanitizers $AUXILIARY_FUZZER
+   else
+    check_mixed_sanitizers $FUZZER
+  fi
+  result=$?
+  checks_failed=$(( $checks_failed + $result ))
+
+  check_startup_crash $FUZZER
+  result=$?
+  checks_failed=$(( $checks_failed + $result ))
+
+  # TODO: re-enable after introducing bug auto-filing for bad builds.
+  # check_seed_corpus $FUZZER
+  return $checks_failed
+}
+
+
+if [ $# -ne 1 -a $# -ne 2 ]; then
+  echo "Usage: $0 <fuzz_target_binary> [<auxiliary_binary>]"
+  exit 1
+fi
+
+# Fuzz target path.
+FUZZER=$1
+AUXILIARY_FUZZER=${2:-}
+
+main $FUZZER $AUXILIARY_FUZZER
+exit $?

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/coverage

@@ -0,0 +1,549 @@
+#!/bin/bash -u
+# Copyright 2018 Google Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+cd $OUT
+
+if (( $# > 0 )); then
+  FUZZ_TARGETS="$@"
+else
+  FUZZ_TARGETS="$(find . -maxdepth 1 -type f -executable -printf '%P\n' | \
+      grep -v -x -F \
+      -e 'llvm-symbolizer' \
+      -e 'jazzer_agent_deploy.jar' \
+      -e 'jazzer_driver' \
+      -e 'jazzer_driver_with_sanitizer' \
+      -e 'sanitizer_with_fuzzer.so')"
+fi
+
+COVERAGE_OUTPUT_DIR=${COVERAGE_OUTPUT_DIR:-$OUT}
+
+DUMPS_DIR="$COVERAGE_OUTPUT_DIR/dumps"
+FUZZERS_COVERAGE_DUMPS_DIR="$DUMPS_DIR/fuzzers_coverage"
+MERGED_COVERAGE_DIR="$COVERAGE_OUTPUT_DIR/merged_coverage"
+FUZZER_STATS_DIR="$COVERAGE_OUTPUT_DIR/fuzzer_stats"
+TEXTCOV_REPORT_DIR="$COVERAGE_OUTPUT_DIR/textcov_reports"
+LOGS_DIR="$COVERAGE_OUTPUT_DIR/logs"
+REPORT_ROOT_DIR="$COVERAGE_OUTPUT_DIR/report"
+REPORT_BY_TARGET_ROOT_DIR="$COVERAGE_OUTPUT_DIR/report_target"
+PLATFORM=linux
+REPORT_PLATFORM_DIR="$COVERAGE_OUTPUT_DIR/report/$PLATFORM"
+
+for directory in $DUMPS_DIR $FUZZER_STATS_DIR $LOGS_DIR $REPORT_ROOT_DIR $TEXTCOV_REPORT_DIR\
+                 $REPORT_PLATFORM_DIR $REPORT_BY_TARGET_ROOT_DIR $FUZZERS_COVERAGE_DUMPS_DIR $MERGED_COVERAGE_DIR; do
+  rm -rf $directory
+  mkdir -p $directory
+done
+
+PROFILE_FILE="$DUMPS_DIR/merged.profdata"
+SUMMARY_FILE="$REPORT_PLATFORM_DIR/summary.json"
+COVERAGE_TARGET_FILE="$FUZZER_STATS_DIR/coverage_targets.txt"
+
+# Use path mapping, as $SRC directory from the builder is copied into $OUT/$SRC.
+PATH_EQUIVALENCE_ARGS="-path-equivalence=/,$OUT"
+
+# It's important to use $COVERAGE_EXTRA_ARGS as the last argument, because it
+# can contain paths to source files / directories which are positional args.
+LLVM_COV_COMMON_ARGS="$PATH_EQUIVALENCE_ARGS \
+    -ignore-filename-regex=.*src/libfuzzer/.* $COVERAGE_EXTRA_ARGS"
+
+# Options to extract branch coverage.
+BRANCH_COV_ARGS="--show-branches=count --show-expansions"
+
+# Timeout for running a single fuzz target.
+TIMEOUT=1h
+
+# This will be used by llvm-cov command to generate the actual report.
+objects=""
+
+# Number of CPUs available, this is needed for running tests in parallel.
+# Set the max number of parallel jobs to be the CPU count and a max of 10.
+NPROC=$(nproc)
+MAX_PARALLEL_COUNT=10
+
+CORPUS_DIR=${CORPUS_DIR:-"/corpus"}
+
+function run_fuzz_target {
+  local target=$1
+
+  # '%1m' will produce separate dump files for every object. For example, if a
+  # fuzz target loads a shared library, we will have dumps for both of them.
+  local profraw_file="$DUMPS_DIR/$target.%1m.profraw"
+  local profraw_file_mask="$DUMPS_DIR/$target.*.profraw"
+  local profdata_file="$DUMPS_DIR/$target.profdata"
+  local corpus_real="$CORPUS_DIR/${target}"
+
+  # -merge=1 requires an output directory, create a new, empty dir for that.
+  local corpus_dummy="$OUT/dummy_corpus_dir_for_${target}"
+  rm -rf $corpus_dummy && mkdir -p $corpus_dummy
+
+  # Use -merge=1 instead of -runs=0 because merge is crash resistant and would
+  # let to get coverage using all corpus files even if there are crash inputs.
+  # Merge should not introduce any significant overhead compared to -runs=0,
+  # because (A) corpuses are already minimized; (B) we do not use sancov, and so
+  # libFuzzer always finishes merge with an empty output dir.
+  # Use 100s timeout instead of 25s as code coverage builds can be very slow.
+  local args="-merge=1 -timeout=100 $corpus_dummy $corpus_real"
+
+  export LLVM_PROFILE_FILE=$profraw_file
+  timeout $TIMEOUT $OUT/$target $args &> $LOGS_DIR/$target.log
+  if (( $? != 0 )); then
+    echo "Error occured while running $target:"
+    cat $LOGS_DIR/$target.log
+  fi
+
+  rm -rf $corpus_dummy
+  if (( $(du -c $profraw_file_mask | tail -n 1 | cut -f 1) == 0 )); then
+    # Skip fuzz targets that failed to produce profile dumps.
+    return 0
+  fi
+
+  # If necessary translate to latest profraw version.
+  if [[ $target == *"@"* ]]; then
+    # Extract fuzztest binary name from fuzztest wrapper script.
+    target=(${target//@/ }[0])
+  fi
+  profraw_update.py $OUT/$target -i $profraw_file_mask
+  llvm-profdata merge -j=1 -sparse $profraw_file_mask -o $profdata_file
+
+  # Delete unnecessary and (potentially) large .profraw files.
+  rm $profraw_file_mask
+
+  shared_libraries=$(coverage_helper shared_libs -build-dir=$OUT -object=$target)
+
+  llvm-cov export -summary-only -instr-profile=$profdata_file -object=$target \
+      $shared_libraries $LLVM_COV_COMMON_ARGS > $FUZZER_STATS_DIR/$target.json
+
+  # For introspector.
+  llvm-cov show -instr-profile=$profdata_file -object=$target -line-coverage-gt=0 $shared_libraries $BRANCH_COV_ARGS $LLVM_COV_COMMON_ARGS > ${TEXTCOV_REPORT_DIR}/$target.covreport
+}
+
+function run_go_fuzz_target {
+  local target=$1
+
+  echo "Running go target $target"
+  export FUZZ_CORPUS_DIR="$CORPUS_DIR/${target}/"
+  export FUZZ_PROFILE_NAME="$DUMPS_DIR/$target.perf"
+
+  # setup for native go fuzzers
+  cd $OUT
+  mkdir -p "testdata/fuzz/${target}"
+  cp -r "${FUZZ_CORPUS_DIR}" "testdata/fuzz/"
+
+  # rewrite libFuzzer corpus to Std Go corpus if native fuzzing
+  grep "TestFuzzCorpus" $target > /dev/null 2>&1 && $SYSGOPATH/bin/convertcorpus $target "testdata/fuzz/${target}"
+  cd -
+
+  timeout $TIMEOUT $OUT/$target -test.coverprofile $DUMPS_DIR/$target.profdata &> $LOGS_DIR/$target.log
+  if (( $? != 0 )); then
+    echo "Error occured while running $target:"
+    cat $LOGS_DIR/$target.log
+  fi
+
+  # cleanup after native go fuzzers
+  rm -r "${OUT}/testdata/fuzz/${target}"
+
+  # The Go 1.18 fuzzers are renamed to "*_fuzz_.go" during "infra/helper.py build_fuzzers".
+  # They are are therefore refered to as "*_fuzz_.go" in the profdata files.
+  # Since the copies named "*_fuzz_.go" do not exist in the file tree during
+  # the coverage build, we change the references in the .profdata files
+  # to the original file names.
+  #sed -i "s/_test.go_fuzz_.go/_test.go/g" $DUMPS_DIR/$target.profdata
+  # translate from golangish paths to current absolute paths
+  cat $OUT/$target.gocovpath | while read i; do sed -i $i $DUMPS_DIR/$target.profdata; done
+  # cf PATH_EQUIVALENCE_ARGS
+  sed -i 's=/='$OUT'/=' $DUMPS_DIR/$target.profdata
+  $SYSGOPATH/bin/gocovsum $DUMPS_DIR/$target.profdata > $FUZZER_STATS_DIR/$target.json
+}
+
+function run_python_fuzz_target {
+  local target=$1
+  local zipped_sources="$DUMPS_DIR/$target.deps.zip"
+  local corpus_real="$CORPUS_DIR/${target}"
+  # Write dummy stats file
+  echo "{}" > "$FUZZER_STATS_DIR/$target.json"
+
+  # Run fuzzer
+  $OUT/$target $corpus_real -atheris_runs=$(ls -la $corpus_real | wc -l) > $LOGS_DIR/$target.log 2>&1
+  if (( $? != 0 )); then
+    echo "Error happened getting coverage of $target"
+    echo "This is likely because Atheris did not exit gracefully"
+    cat $LOGS_DIR/$target.log
+    return 0
+  fi
+  mv .coverage $OUT/.coverage_$target
+}
+
+function run_java_fuzz_target {
+  local target=$1
+
+  local exec_file="$DUMPS_DIR/$target.exec"
+  local class_dump_dir="$DUMPS_DIR/${target}_classes/"
+  mkdir "$class_dump_dir"
+  local corpus_real="$CORPUS_DIR/${target}"
+
+  # -merge=1 requires an output directory, create a new, empty dir for that.
+  local corpus_dummy="$OUT/dummy_corpus_dir_for_${target}"
+  rm -rf $corpus_dummy && mkdir -p $corpus_dummy
+
+  # Use 100s timeout instead of 25s as code coverage builds can be very slow.
+  local jacoco_args="destfile=$exec_file,classdumpdir=$class_dump_dir,excludes=com.code_intelligence.jazzer.*\\:com.sun.tools.attach.VirtualMachine"
+  local args="-merge=1 -timeout=100 --nohooks \
+      --additional_jvm_args=-javaagent\\:/opt/jacoco-agent.jar=$jacoco_args \
+      $corpus_dummy $corpus_real"
+
+  timeout $TIMEOUT $OUT/$target $args &> $LOGS_DIR/$target.log
+  if (( $? != 0 )); then
+    echo "Error occured while running $target:"
+    cat $LOGS_DIR/$target.log
+  fi
+
+  if (( $(du -c $exec_file | tail -n 1 | cut -f 1) == 0 )); then
+    # Skip fuzz targets that failed to produce .exec files.
+    echo "$target failed to produce .exec file."
+    return 0
+  fi
+
+  # Generate XML report only as input to jacoco_report_converter.
+  # Source files are not needed for the summary.
+  local xml_report="$DUMPS_DIR/${target}.xml"
+  local summary_file="$FUZZER_STATS_DIR/$target.json"
+  java -jar /opt/jacoco-cli.jar report $exec_file \
+      --xml $xml_report \
+      --classfiles $class_dump_dir
+
+  # Write llvm-cov summary file.
+  jacoco_report_converter.py $xml_report $summary_file
+}
+
+function run_javascript_fuzz_target {
+  local target=$1
+  local corpus_real="$CORPUS_DIR/${target}"
+
+  # -merge=1 requires an output directory, create a new, empty dir for that.
+  local corpus_dummy="$OUT/dummy_corpus_dir_for_${target}"
+  rm -rf $corpus_dummy && mkdir -p $corpus_dummy
+
+  # IstanbulJS currently does not work when the tested program creates
+  # subprocesses. For this reason, we first minimize the corpus removing
+  # any crashing inputs so that we can report source-based code coverage
+  # with a single sweep over the minimized corpus
+  local merge_args="-merge=1 -timeout=100 $corpus_dummy $corpus_real"
+  timeout $TIMEOUT $OUT/$target $merge_args &> $LOGS_DIR/$target.log
+
+  # nyc saves the coverage reports in a directory with the default name "coverage"
+  local coverage_dir="$DUMPS_DIR/coverage_dir_for_${target}"
+  rm -rf $coverage_dir && mkdir -p $coverage_dir
+
+  local nyc_json_coverage_file="$coverage_dir/coverage-final.json"
+  local nyc_json_summary_file="$coverage_dir/coverage-summary.json"
+
+  local args="-runs=0 $corpus_dummy"
+  local jazzerjs_args="--coverage --coverageDirectory $coverage_dir --coverageReporters json --coverageReporters json-summary"
+
+  JAZZERJS_EXTRA_ARGS=$jazzerjs_args $OUT/$target $args &> $LOGS_DIR/$target.log
+
+  if (( $? != 0 )); then
+    echo "Error occured while running $target:"
+    cat $LOGS_DIR/$target.log
+  fi
+
+  if [ ! -s $nyc_json_coverage_file ]; then
+    # Skip fuzz targets that failed to produce coverage-final.json file.
+    echo "$target failed to produce coverage-final.json file."
+    return 0
+  fi
+
+  cp $nyc_json_coverage_file $FUZZERS_COVERAGE_DUMPS_DIR/$target.json
+
+  local summary_file="$FUZZER_STATS_DIR/$target.json"
+
+  nyc_report_converter.py $nyc_json_summary_file $summary_file
+}
+
+function generate_html {
+  local profdata=$1
+  local shared_libraries=$2
+  local objects=$3
+  local output_dir=$4
+
+  rm -rf "$output_dir"
+  mkdir -p "$output_dir/$PLATFORM"
+
+  local llvm_cov_args="-instr-profile=$profdata $objects $LLVM_COV_COMMON_ARGS"
+  llvm-cov show -format=html -output-dir=$output_dir -Xdemangler rcfilt $llvm_cov_args
+
+  # Export coverage summary in JSON format.
+  local summary_file=$output_dir/$PLATFORM/summary.json
+
+  llvm-cov export -summary-only $llvm_cov_args > $summary_file
+
+  coverage_helper -v post_process -src-root-dir=/ -summary-file=$summary_file \
+      -output-dir=$output_dir $PATH_EQUIVALENCE_ARGS
+}
+
+export SYSGOPATH=$GOPATH
+export GOPATH=$OUT/$GOPATH
+# Run each fuzz target, generate raw coverage dumps.
+for fuzz_target in $FUZZ_TARGETS; do
+  # Test if fuzz target is a golang one.
+  if [[ $FUZZING_LANGUAGE == "go" ]]; then
+    # Continue if not a fuzz target.
+    if [[ $FUZZING_ENGINE != "none" ]]; then
+      grep "FUZZ_CORPUS_DIR" $fuzz_target > /dev/null 2>&1 || grep "testing\.T" $fuzz_target > /dev/null 2>&1 || continue
+    fi
+    # Log the target in the targets file.
+    echo ${fuzz_target} >> $COVERAGE_TARGET_FILE
+
+    # Run the coverage collection.
+    run_go_fuzz_target $fuzz_target &
+  elif [[ $FUZZING_LANGUAGE == "python" ]]; then
+    echo "Entering python fuzzing"
+    # Log the target in the targets file.
+    echo ${fuzz_target} >> $COVERAGE_TARGET_FILE
+
+    # Run the coverage collection.
+    run_python_fuzz_target $fuzz_target
+  elif [[ $FUZZING_LANGUAGE == "jvm" ]]; then
+    # Continue if not a fuzz target.
+    if [[ $FUZZING_ENGINE != "none" ]]; then
+      grep "LLVMFuzzerTestOneInput" $fuzz_target > /dev/null 2>&1 || continue
+    fi
+
+    echo "Running $fuzz_target"
+    # Log the target in the targets file.
+    echo ${fuzz_target} >> $COVERAGE_TARGET_FILE
+
+    # Run the coverage collection.
+    run_java_fuzz_target $fuzz_target &
+  elif [[ $FUZZING_LANGUAGE == "javascript" ]]; then
+    # Continue if not a fuzz target.
+    if [[ $FUZZING_ENGINE != "none" ]]; then
+      grep "LLVMFuzzerTestOneInput" $fuzz_target > /dev/null 2>&1 || continue
+    fi
+
+    echo "Running $fuzz_target"
+    # Log the target in the targets file.
+    echo ${fuzz_target} >> $COVERAGE_TARGET_FILE
+
+    # Run the coverage collection.
+    run_javascript_fuzz_target $fuzz_target &
+  else
+    # Continue if not a fuzz target.
+    if [[ $FUZZING_ENGINE != "none" ]]; then
+      grep "LLVMFuzzerTestOneInput" $fuzz_target > /dev/null 2>&1 || continue
+    fi
+
+    echo "Running $fuzz_target"
+    # Log the target in the targets file.
+    echo ${fuzz_target} >> $COVERAGE_TARGET_FILE
+
+    # Run the coverage collection.
+    run_fuzz_target $fuzz_target &
+
+    # Rewrite object if its a FUZZTEST target
+    if [[ $fuzz_target == *"@"* ]]; then
+      # Extract fuzztest binary name from fuzztest wrapper script.
+      fuzz_target=(${fuzz_target//@/ }[0])
+    fi
+    if [[ -z $objects ]]; then
+      # The first object needs to be passed without -object= flag.
+      objects="$fuzz_target"
+    else
+      objects="$objects -object=$fuzz_target"
+    fi
+  fi
+
+
+  # Limit the number of processes to be spawned.
+  n_child_proc=$(jobs -rp | wc -l)
+  while [[ "$n_child_proc" -eq "$NPROC" || "$n_child_proc" -gt "$MAX_PARALLEL_COUNT" ]]; do
+    sleep 4
+    n_child_proc=$(jobs -rp | wc -l)
+  done
+done
+
+# Wait for background processes to finish.
+wait
+
+if [[ $FUZZING_LANGUAGE == "go" ]]; then
+  echo $DUMPS_DIR
+  $SYSGOPATH/bin/gocovmerge $DUMPS_DIR/*.profdata > fuzz.cov
+  gotoolcover -html=fuzz.cov -o $REPORT_ROOT_DIR/index.html
+  $SYSGOPATH/bin/gocovsum fuzz.cov > $SUMMARY_FILE
+  cp $REPORT_ROOT_DIR/index.html $REPORT_PLATFORM_DIR/index.html
+  $SYSGOPATH/bin/pprof-merge $DUMPS_DIR/*.perf.cpu.prof
+  mv merged.data $REPORT_ROOT_DIR/cpu.prof
+  $SYSGOPATH/bin/pprof-merge $DUMPS_DIR/*.perf.heap.prof
+  mv merged.data $REPORT_ROOT_DIR/heap.prof
+  #TODO some proxy for go tool pprof -http=127.0.0.1:8001 $DUMPS_DIR/cpu.prof
+  echo "Finished generating code coverage report for Go fuzz targets."
+elif [[ $FUZZING_LANGUAGE == "python" ]]; then
+  # Extract source files from all dependency zip folders
+  mkdir -p /pythoncovmergedfiles/medio
+  PYCOVDIR=/pycovdir/
+  mkdir $PYCOVDIR
+  for fuzzer in $FUZZ_TARGETS; do
+    fuzzer_deps=${fuzzer}.pkg.deps.zip
+    unzip $OUT/${fuzzer_deps}
+    rsync -r ./medio /pythoncovmergedfiles/medio
+    rm -rf ./medio
+
+    # Translate paths in unzipped folders to paths that we can use
+    mv $OUT/.coverage_$fuzzer .coverage
+    python3 /usr/local/bin/python_coverage_runner_help.py translate /pythoncovmergedfiles/medio
+    cp .new_coverage $PYCOVDIR/.coverage_$fuzzer
+    cp .new_coverage $OUT/coverage_d_$fuzzer
+  done
+
+  # Combine coverage
+  cd $PYCOVDIR
+  python3 /usr/local/bin/python_coverage_runner_help.py combine .coverage_*
+  python3 /usr/local/bin/python_coverage_runner_help.py html
+  # Produce all_cov file used by fuzz introspector.
+  python3 /usr/local/bin/python_coverage_runner_help.py json -o ${TEXTCOV_REPORT_DIR}/all_cov.json
+
+  # Generate .json with similar format to llvm-cov output.
+  python3 /usr/local/bin/python_coverage_runner_help.py \
+      convert-to-summary-json ${TEXTCOV_REPORT_DIR}/all_cov.json $SUMMARY_FILE
+
+  # Copy coverage date out
+  cp htmlcov/status.json ${TEXTCOV_REPORT_DIR}/html_status.json
+
+  mv htmlcov/* $REPORT_PLATFORM_DIR/
+  mv .coverage_* $REPORT_PLATFORM_DIR/
+elif [[ $FUZZING_LANGUAGE == "jvm" ]]; then
+
+  # From this point on the script does not tolerate any errors.
+  set -e
+
+  # Merge .exec files from the individual targets.
+  jacoco_merged_exec=$DUMPS_DIR/jacoco.merged.exec
+  java -jar /opt/jacoco-cli.jar merge $DUMPS_DIR/*.exec \
+      --destfile $jacoco_merged_exec
+
+  # Prepare classes directory for jacoco process
+  classes_dir=$DUMPS_DIR/classes
+  mkdir $classes_dir
+
+  # Only copy class files found in $OUT/$SRC to ensure they are
+  # lively compiled from the project, avoiding inclusion of
+  # dependency classes. This also includes the fuzzer classes.
+  find "$OUT/$SRC" -type f -name "*.class" | while read -r class_file; do
+    # Skip module-info.class
+    if [[ "$(basename "$class_file")" == "module-info.class" ]]; then
+        continue
+    fi
+
+    # Use javap to extract the fully qualified name of the class and copy it to $classes_dir
+    fqn=$(javap -verbose "$class_file" 2>/dev/null | grep "this_class:" | grep -oP '(?<=// ).*')
+    if [ -n "$fqn" ]; then
+      mkdir -p $classes_dir/$(dirname $fqn)
+      cp $class_file $classes_dir/$fqn.class
+    fi
+  done
+
+  # Heuristically determine source directories based on Maven structure.
+  # Always include the $SRC root as it likely contains the fuzzer sources.
+  sourcefiles_args=(--sourcefiles $OUT/$SRC)
+  source_dirs=$(find $OUT/$SRC -type d -name 'java')
+  for source_dir in $source_dirs; do
+    sourcefiles_args+=(--sourcefiles "$source_dir")
+  done
+
+  # Generate HTML and XML reports.
+  xml_report=$REPORT_PLATFORM_DIR/index.xml
+  java -jar /opt/jacoco-cli.jar report $jacoco_merged_exec \
+      --html $REPORT_PLATFORM_DIR \
+      --xml $xml_report \
+      --classfiles $classes_dir \
+      "${sourcefiles_args[@]}"
+
+  # Also serve the raw exec file and XML report, which can be useful for
+  # automated analysis.
+  cp $jacoco_merged_exec $REPORT_PLATFORM_DIR/jacoco.exec
+  cp $xml_report $REPORT_PLATFORM_DIR/jacoco.xml
+  cp $xml_report $TEXTCOV_REPORT_DIR/jacoco.xml
+
+  # Write llvm-cov summary file.
+  jacoco_report_converter.py $xml_report $SUMMARY_FILE
+
+  set +e
+elif [[ $FUZZING_LANGUAGE == "javascript" ]]; then
+
+  # From this point on the script does not tolerate any errors.
+  set -e
+
+  json_report=$MERGED_COVERAGE_DIR/coverage.json
+  nyc merge $FUZZERS_COVERAGE_DUMPS_DIR $json_report
+
+  nyc report -t $MERGED_COVERAGE_DIR --report-dir $REPORT_PLATFORM_DIR --reporter=html --reporter=json-summary
+
+  nyc_json_summary_file=$REPORT_PLATFORM_DIR/coverage-summary.json
+
+  # Write llvm-cov summary file.
+  nyc_report_converter.py $nyc_json_summary_file $SUMMARY_FILE
+
+  set +e
+else
+
+  # From this point on the script does not tolerate any errors.
+  set -e
+
+  # Merge all dumps from the individual targets.
+  rm -f $PROFILE_FILE
+  llvm-profdata merge -sparse $DUMPS_DIR/*.profdata -o $PROFILE_FILE
+
+  # TODO(mmoroz): add script from Chromium for rendering directory view reports.
+  # The first path in $objects does not have -object= prefix (llvm-cov format).
+  shared_libraries=$(coverage_helper shared_libs -build-dir=$OUT -object=$objects)
+  objects="$objects $shared_libraries"
+
+  generate_html $PROFILE_FILE "$shared_libraries" "$objects" "$REPORT_ROOT_DIR"
+
+  # Per target reports.
+  for fuzz_target in $FUZZ_TARGETS; do
+    if [[ $fuzz_target == *"@"* ]]; then
+      profdata_path=$DUMPS_DIR/$fuzz_target.profdata
+      report_dir=$REPORT_BY_TARGET_ROOT_DIR/$fuzz_target
+      # Extract fuzztest binary name from fuzztest wrapper script.
+      fuzz_target=(${fuzz_target//@/ }[0])
+    else
+      profdata_path=$DUMPS_DIR/$fuzz_target.profdata
+      report_dir=$REPORT_BY_TARGET_ROOT_DIR/$fuzz_target
+    fi
+    if [[ ! -f "$profdata_path" ]]; then
+      echo "WARNING: $fuzz_target has no profdata generated."
+      continue
+    fi
+
+    generate_html $profdata_path "$shared_libraries" "$fuzz_target" "$report_dir"
+  done
+
+  set +e
+fi
+
+# Make sure report is readable.
+chmod -R +r $REPORT_ROOT_DIR $REPORT_BY_TARGET_ROOT_DIR
+find $REPORT_ROOT_DIR $REPORT_BY_TARGET_ROOT_DIR -type d -exec chmod +x {} +
+
+# HTTP_PORT is optional.
+set +u
+if [[ -n $HTTP_PORT ]]; then
+  # Serve the report locally.
+  echo "Serving the report on http://127.0.0.1:$HTTP_PORT/linux/index.html"
+  cd $REPORT_ROOT_DIR
+  python3 -m http.server $HTTP_PORT
+fi

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/install_deps.sh

@@ -0,0 +1,37 @@
+#!/bin/bash -eux
+# Copyright 2022 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+# Install dependencies in a platform-aware way.
+
+apt-get update && apt-get install -y \
+    binutils \
+    file \
+    ca-certificates \
+    fonts-dejavu \
+    git \
+    libcap2 \
+    rsync \
+    unzip \
+    wget \
+    zip --no-install-recommends
+
+case $(uname -m) in
+  x86_64)
+    # We only need to worry about i386 if we are on x86_64.
+    apt-get install -y lib32gcc1 libc6-i386
+    ;;
+esac

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/install_go.sh

@@ -0,0 +1,41 @@
+#!/bin/bash -eux
+# Copyright 2022 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+# Install go on x86_64, don't do anything on ARM.
+
+case $(uname -m) in
+    x86_64)
+      # Download and install Go 1.19.
+      wget -q https://storage.googleapis.com/golang/getgo/installer_linux -O $SRC/installer_linux
+      chmod +x $SRC/installer_linux
+      SHELL="bash" $SRC/installer_linux -version 1.19
+      rm $SRC/installer_linux
+      # Set up Golang coverage modules.
+      printf $(find . -name gocoverage)
+      cd $GOPATH/gocoverage && /root/.go/bin/go install ./...
+      cd convertcorpus && /root/.go/bin/go install .
+      cd /root/.go/src/cmd/cover && /root/.go/bin/go build && mv cover $GOPATH/bin/gotoolcover
+      ;;
+    aarch64)
+      # Don't install go because installer is not provided.
+      echo "Not installing go: aarch64."
+      ;;
+    *)
+      echo "Error: unsupported architecture: $(uname -m)"
+      exit 1
+      ;;
+esac

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/install_java.sh

@@ -0,0 +1,46 @@
+#!/bin/bash -eux
+# Copyright 2022 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+# Install java in a platform-aware way.
+
+ARCHITECTURE=
+case $(uname -m) in
+    x86_64)
+      ARCHITECTURE=x64
+        ;;
+    aarch64)
+      ARCHITECTURE=aarch64
+      ;;
+    *)
+      echo "Error: unsupported architecture: $(uname -m)"
+      exit 1
+      ;;
+esac
+
+wget -q https://download.java.net/java/GA/jdk17.0.2/dfd4a8d0985749f896bed50d7138ee7f/8/GPL/openjdk-17.0.2_linux-"$ARCHITECTURE"_bin.tar.gz -O /tmp/openjdk-17.0.2_linux-"$ARCHITECTURE"_bin.tar.gz
+wget -q https://download.java.net/java/GA/jdk15.0.2/0d1cfde4252546c6931946de8db48ee2/7/GPL/openjdk-15.0.2_linux-"$ARCHITECTURE"_bin.tar.gz -O /tmp/openjdk-15.0.2_linux-"$ARCHITECTURE"_bin.tar.gz
+cd /tmp
+mkdir -p $JAVA_HOME
+tar -xz --strip-components=1 -f openjdk-17.0.2_linux-"$ARCHITECTURE"_bin.tar.gz --directory $JAVA_HOME
+rm -f openjdk-17.0.2_linux-"$ARCHITECTURE"_bin.tar.gz
+rm -rf $JAVA_HOME/jmods $JAVA_HOME/lib/src.zip
+
+# Install OpenJDK 15 and trim its size by removing unused components. Some projects only run with Java 15.
+mkdir -p $JAVA_15_HOME
+tar -xz --strip-components=1 -f openjdk-15.0.2_linux-"$ARCHITECTURE"_bin.tar.gz --directory $JAVA_15_HOME
+rm -f openjdk-15.0.2_linux-"$ARCHITECTURE"_bin.tar.gz
+rm -rf $JAVA_15_HOME/jmods $JAVA_15_HOME/lib/src.zip

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/jacoco_report_converter.py

@@ -0,0 +1,174 @@
+#!/usr/bin/env python3
+# Copyright 2021 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+"""Helper script for creating an llvm-cov style JSON summary from a JaCoCo XML
+report."""
+import json
+import os
+import sys
+import xml.etree.ElementTree as ET
+
+
+def convert(xml):
+  """Turns a JaCoCo XML report into an llvm-cov JSON summary."""
+  summary = {
+      'type': 'oss-fuzz.java.coverage.json.export',
+      'version': '1.0.0',
+      'data': [{
+          'totals': {},
+          'files': [],
+      }],
+  }
+
+  report = ET.fromstring(xml)
+  totals = make_element_summary(report)
+  summary['data'][0]['totals'] = totals
+
+  # Since Java compilation does not track source file location, we match
+  # coverage info to source files via the full class name, e.g. we search for
+  # a path in /out/src ending in foo/bar/Baz.java for the class foo.bar.Baz.
+  # Under the assumptions that a given project only ever contains a single
+  # version of a class and that no class name appears as a suffix of another
+  # class name, we can assign coverage info to every source file matched in that
+  # way.
+  src_files = list_src_files()
+
+  for class_element in report.findall('./package/class'):
+    # Skip fuzzer classes
+    if is_fuzzer_class(class_element):
+      continue
+
+    # Skip non class elements
+    if 'sourcefilename' not in class_element.attrib:
+      continue
+
+    class_name = class_element.attrib['name']
+    package_name = os.path.dirname(class_name)
+    basename = class_element.attrib['sourcefilename']
+    # This path is 'foo/Bar.java' for the class element
+    # <class name="foo/Bar" sourcefilename="Bar.java">.
+    canonical_path = os.path.join(package_name, basename)
+
+    class_summary = make_element_summary(class_element)
+    for src_file in relative_to_src_path(src_files, canonical_path):
+      summary['data'][0]['files'].append({
+          'filename': src_file,
+          'summary': class_summary,
+      })
+
+  return json.dumps(summary)
+
+
+def list_src_files():
+  """Returns a map from basename to full path for all files in $OUT/$SRC."""
+  filename_to_paths = {}
+  out_path = os.environ['OUT'] + '/'
+  src_path = os.environ['SRC']
+  src_in_out = out_path + src_path
+  for dirpath, _, filenames in os.walk(src_in_out):
+    for filename in filenames:
+      full_path = dirpath + '/' + filename
+      # Map /out//src/... to /src/...
+      file_path = full_path[len(out_path):]
+      filename_to_paths.setdefault(filename, []).append(file_path)
+  return filename_to_paths
+
+
+def is_fuzzer_class(class_element):
+  """Check if the class is fuzzer class."""
+  method_elements = class_element.find('./method[@name=\"fuzzerTestOneInput\"]')
+  if method_elements:
+    return True
+
+  return False
+
+
+def relative_to_src_path(src_files, canonical_path):
+  """Returns all paths in src_files ending in canonical_path."""
+  basename = os.path.basename(canonical_path)
+  if basename not in src_files:
+    return []
+  candidate_paths = src_files[basename]
+  return [
+      path for path in candidate_paths if path.endswith("/" + canonical_path)
+  ]
+
+
+def make_element_summary(element):
+  """Returns a coverage summary for an element in the XML report."""
+  summary = {}
+
+  function_counter = element.find('./counter[@type=\'METHOD\']')
+  summary['functions'] = make_counter_summary(function_counter)
+
+  line_counter = element.find('./counter[@type=\'LINE\']')
+  summary['lines'] = make_counter_summary(line_counter)
+
+  # JaCoCo tracks branch coverage, which counts the covered control-flow edges
+  # between llvm-cov's regions instead of the covered regions themselves. For
+  # non-trivial code parts, the difference is usually negligible. However, if
+  # all methods of a class consist of a single region only (no branches),
+  # JaCoCo does not report any branch coverage even if there is instruction
+  # coverage. Since this would give incorrect results for CI Fuzz purposes, we
+  # increase the regions counter by 1 if there is any amount of instruction
+  # coverage.
+  instruction_counter = element.find('./counter[@type=\'INSTRUCTION\']')
+  has_some_coverage = instruction_counter is not None and int(
+      instruction_counter.attrib["covered"]) > 0
+  branch_covered_adjustment = 1 if has_some_coverage else 0
+  region_counter = element.find('./counter[@type=\'BRANCH\']')
+  summary['regions'] = make_counter_summary(
+      region_counter, covered_adjustment=branch_covered_adjustment)
+
+  return summary
+
+
+def make_counter_summary(counter_element, covered_adjustment=0):
+  """Turns a JaCoCo <counter> element into an llvm-cov totals entry."""
+  summary = {}
+  covered = covered_adjustment
+  missed = 0
+  if counter_element is not None:
+    covered += int(counter_element.attrib['covered'])
+    missed += int(counter_element.attrib['missed'])
+  summary['covered'] = covered
+  summary['notcovered'] = missed
+  summary['count'] = summary['covered'] + summary['notcovered']
+  if summary['count'] != 0:
+    summary['percent'] = (100.0 * summary['covered']) / summary['count']
+  else:
+    summary['percent'] = 0
+  return summary
+
+
+def main():
+  """Produces an llvm-cov style JSON summary from a JaCoCo XML report."""
+  if len(sys.argv) != 3:
+    sys.stderr.write('Usage: %s <path_to_jacoco_xml> <out_path_json>\n' %
+                     sys.argv[0])
+    return 1
+
+  with open(sys.argv[1], 'r') as xml_file:
+    xml_report = xml_file.read()
+  json_summary = convert(xml_report)
+  with open(sys.argv[2], 'w') as json_file:
+    json_file.write(json_summary)
+
+  return 0
+
+
+if __name__ == '__main__':
+  sys.exit(main())

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/parse_options.py

@@ -0,0 +1,58 @@
+#!/usr/bin/env python3
+# Copyright 2020 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+"""Helper script for parsing custom fuzzing options."""
+import configparser
+import sys
+
+
+def parse_options(options_file_path, options_section):
+  """Parses the given file and returns options from the given section."""
+  parser = configparser.ConfigParser()
+  parser.read(options_file_path)
+
+  if not parser.has_section(options_section):
+    return None
+
+  options = parser[options_section]
+
+  if options_section == 'libfuzzer':
+    options_string = ' '.join(
+        '-%s=%s' % (key, value) for key, value in options.items())
+  else:
+    # Sanitizer options.
+    options_string = ':'.join(
+        '%s=%s' % (key, value) for key, value in options.items())
+
+  return options_string
+
+
+def main():
+  """Processes the arguments and prints the options in the correct format."""
+  if len(sys.argv) < 3:
+    sys.stderr.write('Usage: %s <path_to_options_file> <options_section>\n' %
+                     sys.argv[0])
+    return 1
+
+  options = parse_options(sys.argv[1], sys.argv[2])
+  if options is not None:
+    print(options)
+
+  return 0
+
+
+if __name__ == "__main__":
+  sys.exit(main())

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/reproduce

@@ -0,0 +1,34 @@
+#!/bin/bash -eux
+# Copyright 2016 Google Inc.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+FUZZER=$1
+shift
+
+if [ ! -v TESTCASE ]; then
+    TESTCASE="/testcase"
+fi
+
+if [ ! -f $TESTCASE ]; then
+  echo "Error: $TESTCASE not found, use: docker run -v <path>:$TESTCASE ..."
+  exit 1
+fi
+
+export RUN_FUZZER_MODE="interactive"
+export FUZZING_ENGINE="libfuzzer"
+export SKIP_SEED_CORPUS="1"
+
+run_fuzzer $FUZZER $@ $TESTCASE

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/ruzzy

@@ -0,0 +1,19 @@
+#!/usr/bin/env bash
+# Copyright 2024 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+
+ASAN_OPTIONS="allocator_may_return_null=1:detect_leaks=0:use_sigaltstack=0" LD_PRELOAD=$(ruby -e 'require "ruzzy"; print Ruzzy::ASAN_PATH') \
+	ruby $@

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/test_all.py

@@ -0,0 +1,295 @@
+#!/usr/bin/env python3
+# Copyright 2020 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+"""Does bad_build_check on all fuzz targets in $OUT."""
+
+import contextlib
+import multiprocessing
+import os
+import re
+import subprocess
+import stat
+import sys
+import tempfile
+
+BASE_TMP_FUZZER_DIR = '/tmp/not-out'
+
+EXECUTABLE = stat.S_IEXEC | stat.S_IXGRP | stat.S_IXOTH
+
+IGNORED_TARGETS = [
+    r'do_stuff_fuzzer', r'checksum_fuzzer', r'fuzz_dump', r'fuzz_keyring',
+    r'xmltest', r'fuzz_compression_sas_rle', r'ares_*_fuzzer'
+]
+
+IGNORED_TARGETS_RE = re.compile('^' + r'$|^'.join(IGNORED_TARGETS) + '$')
+
+
+def move_directory_contents(src_directory, dst_directory):
+  """Moves contents of |src_directory| to |dst_directory|."""
+  # Use mv because mv preserves file permissions. If we don't preserve file
+  # permissions that can mess up CheckFuzzerBuildTest in cifuzz_test.py and
+  # other cases where one is calling test_all on files not in OSS-Fuzz's real
+  # out directory.
+  src_contents = [
+      os.path.join(src_directory, filename)
+      for filename in os.listdir(src_directory)
+  ]
+  command = ['mv'] + src_contents + [dst_directory]
+  subprocess.check_call(command)
+
+
+def is_elf(filepath):
+  """Returns True if |filepath| is an ELF file."""
+  result = subprocess.run(['file', filepath],
+                          stdout=subprocess.PIPE,
+                          check=False)
+  return b'ELF' in result.stdout
+
+
+def is_shell_script(filepath):
+  """Returns True if |filepath| is a shell script."""
+  result = subprocess.run(['file', filepath],
+                          stdout=subprocess.PIPE,
+                          check=False)
+  return b'shell script' in result.stdout
+
+
+def find_fuzz_targets(directory):
+  """Returns paths to fuzz targets in |directory|."""
+  # TODO(https://github.com/google/oss-fuzz/issues/4585): Use libClusterFuzz for
+  # this.
+  fuzz_targets = []
+  for filename in os.listdir(directory):
+    path = os.path.join(directory, filename)
+    if filename == 'llvm-symbolizer':
+      continue
+    if filename.startswith('afl-'):
+      continue
+    if filename.startswith('jazzer_'):
+      continue
+    if not os.path.isfile(path):
+      continue
+    if not os.stat(path).st_mode & EXECUTABLE:
+      continue
+    # Fuzz targets can either be ELF binaries or shell scripts (e.g. wrapper
+    # scripts for Python and JVM targets or rules_fuzzing builds with runfiles
+    # trees).
+    if not is_elf(path) and not is_shell_script(path):
+      continue
+    if os.getenv('FUZZING_ENGINE') not in {'none', 'wycheproof'}:
+      with open(path, 'rb') as file_handle:
+        binary_contents = file_handle.read()
+        if b'LLVMFuzzerTestOneInput' not in binary_contents:
+          continue
+    fuzz_targets.append(path)
+  return fuzz_targets
+
+
+def do_bad_build_check(fuzz_target):
+  """Runs bad_build_check on |fuzz_target|. Returns a
+  Subprocess.ProcessResult."""
+  print('INFO: performing bad build checks for', fuzz_target)
+  if centipede_needs_auxiliaries():
+    print('INFO: Finding Centipede\'s auxiliary for target', fuzz_target)
+    auxiliary_path = find_centipede_auxiliary(fuzz_target)
+    print('INFO: Using auxiliary binary:', auxiliary_path)
+    auxiliary = [auxiliary_path]
+  else:
+    auxiliary = []
+
+  command = ['bad_build_check', fuzz_target] + auxiliary
+  with tempfile.TemporaryDirectory() as temp_centipede_workdir:
+    # Do this so that centipede doesn't fill up the disk during bad build check
+    env = os.environ.copy()
+    env['CENTIPEDE_WORKDIR'] = temp_centipede_workdir
+    return subprocess.run(command,
+                          stderr=subprocess.PIPE,
+                          stdout=subprocess.PIPE,
+                          env=env,
+                          check=False)
+
+
+def get_broken_fuzz_targets(bad_build_results, fuzz_targets):
+  """Returns a list of broken fuzz targets and their process results in
+  |fuzz_targets| where each item in |bad_build_results| is the result of
+  bad_build_check on the corresponding element in |fuzz_targets|."""
+  broken = []
+  for result, fuzz_target in zip(bad_build_results, fuzz_targets):
+    if result.returncode != 0:
+      broken.append((fuzz_target, result))
+  return broken
+
+
+def has_ignored_targets(out_dir):
+  """Returns True if |out_dir| has any fuzz targets we are supposed to ignore
+  bad build checks of."""
+  out_files = set(os.listdir(out_dir))
+  for filename in out_files:
+    if re.match(IGNORED_TARGETS_RE, filename):
+      return True
+  return False
+
+
+@contextlib.contextmanager
+def use_different_out_dir():
+  """Context manager that moves OUT to subdirectory of BASE_TMP_FUZZER_DIR. This
+  is useful for catching hardcoding. Note that this sets the environment
+  variable OUT and therefore must be run before multiprocessing.Pool is created.
+  Resets OUT at the end."""
+  # Use a fake OUT directory to catch path hardcoding that breaks on
+  # ClusterFuzz.
+  initial_out = os.getenv('OUT')
+  os.makedirs(BASE_TMP_FUZZER_DIR, exist_ok=True)
+  # Use a random subdirectory of BASE_TMP_FUZZER_DIR to allow running multiple
+  # instances of test_all in parallel (useful for integration testing).
+  with tempfile.TemporaryDirectory(dir=BASE_TMP_FUZZER_DIR) as out:
+    # Set this so that run_fuzzer which is called by bad_build_check works
+    # properly.
+    os.environ['OUT'] = out
+    # We move the contents of the directory because we can't move the
+    # directory itself because it is a mount.
+    move_directory_contents(initial_out, out)
+    try:
+      yield out
+    finally:
+      move_directory_contents(out, initial_out)
+      os.environ['OUT'] = initial_out
+
+
+def test_all_outside_out(allowed_broken_targets_percentage):
+  """Wrapper around test_all that changes OUT and returns the result."""
+  with use_different_out_dir() as out:
+    return test_all(out, allowed_broken_targets_percentage)
+
+
+def centipede_needs_auxiliaries():
+  """Checks if auxiliaries are needed for Centipede."""
+  # Centipede always requires unsanitized binaries as the main fuzz targets,
+  # and separate sanitized binaries as auxiliaries.
+  # 1. Building sanitized binaries with helper.py (i.e., local or GitHub CI):
+  # Unsanitized ones will be built automatically into the same docker container.
+  # Script bad_build_check tests both
+  # a) If main fuzz targets can run with the auxiliaries, and
+  # b) If the auxiliaries are built with the correct sanitizers.
+  # 2. In Trial build and production build:
+  # Two kinds of binaries will be in separated buckets / docker containers.
+  # Script bad_build_check tests either
+  # a) If the unsanitized binaries can run without the sanitized ones, or
+  # b) If the sanitized binaries are built with the correct sanitizers.
+  return (os.getenv('FUZZING_ENGINE') == 'centipede' and
+          os.getenv('SANITIZER') != 'none' and os.getenv('HELPER') == 'True')
+
+
+def find_centipede_auxiliary(main_fuzz_target_path):
+  """Finds the sanitized binary path that corresponds to |main_fuzz_target| for
+  bad_build_check."""
+  target_dir, target_name = os.path.split(main_fuzz_target_path)
+  sanitized_binary_dir = os.path.join(target_dir,
+                                      f'__centipede_{os.getenv("SANITIZER")}')
+  sanitized_binary_path = os.path.join(sanitized_binary_dir, target_name)
+
+  if os.path.isfile(sanitized_binary_path):
+    return sanitized_binary_path
+
+  # Neither of the following two should ever happen, returns None to indicate
+  # an error.
+  if os.path.isdir(sanitized_binary_dir):
+    print('ERROR: Unable to identify Centipede\'s sanitized target'
+          f'{sanitized_binary_path} in {os.listdir(sanitized_binary_dir)}')
+  else:
+    print('ERROR: Unable to identify Centipede\'s sanitized target directory'
+          f'{sanitized_binary_dir} in {os.listdir(target_dir)}')
+  return None
+
+
+def test_all(out, allowed_broken_targets_percentage):  # pylint: disable=too-many-return-statements
+  """Do bad_build_check on all fuzz targets."""
+  # TODO(metzman): Refactor so that we can convert test_one to python.
+  fuzz_targets = find_fuzz_targets(out)
+  if not fuzz_targets:
+    print('ERROR: No fuzz targets found.')
+    return False
+
+  if centipede_needs_auxiliaries():
+    for fuzz_target in fuzz_targets:
+      if not find_centipede_auxiliary(fuzz_target):
+        print(f'ERROR: Couldn\'t find auxiliary for {fuzz_target}.')
+        return False
+
+  pool = multiprocessing.Pool()
+  bad_build_results = pool.map(do_bad_build_check, fuzz_targets)
+  pool.close()
+  pool.join()
+  broken_targets = get_broken_fuzz_targets(bad_build_results, fuzz_targets)
+  broken_targets_count = len(broken_targets)
+  if not broken_targets_count:
+    return True
+
+  print('Retrying failed fuzz targets sequentially', broken_targets_count)
+  pool = multiprocessing.Pool(1)
+  retry_targets = []
+  for broken_target, result in broken_targets:
+    retry_targets.append(broken_target)
+  bad_build_results = pool.map(do_bad_build_check, retry_targets)
+  pool.close()
+  pool.join()
+  broken_targets = get_broken_fuzz_targets(bad_build_results, broken_targets)
+  broken_targets_count = len(broken_targets)
+  if not broken_targets_count:
+    return True
+
+  print('Broken fuzz targets', broken_targets_count)
+  total_targets_count = len(fuzz_targets)
+  broken_targets_percentage = 100 * broken_targets_count / total_targets_count
+  for broken_target, result in broken_targets:
+    print(broken_target)
+    # Use write because we can't print binary strings.
+    sys.stdout.buffer.write(result.stdout + result.stderr + b'\n')
+
+  if broken_targets_percentage > allowed_broken_targets_percentage:
+    print('ERROR: {broken_targets_percentage}% of fuzz targets seem to be '
+          'broken. See the list above for a detailed information.'.format(
+              broken_targets_percentage=broken_targets_percentage))
+    if has_ignored_targets(out):
+      print('Build check automatically passing because of ignored targets.')
+      return True
+    return False
+  print('{total_targets_count} fuzzers total, {broken_targets_count} '
+        'seem to be broken ({broken_targets_percentage}%).'.format(
+            total_targets_count=total_targets_count,
+            broken_targets_count=broken_targets_count,
+            broken_targets_percentage=broken_targets_percentage))
+  return True
+
+
+def get_allowed_broken_targets_percentage():
+  """Returns the value of the environment value
+  'ALLOWED_BROKEN_TARGETS_PERCENTAGE' as an int or returns a reasonable
+  default."""
+  return int(os.getenv('ALLOWED_BROKEN_TARGETS_PERCENTAGE') or '10')
+
+
+def main():
+  """Does bad_build_check on all fuzz targets in parallel. Returns 0 on success.
+  Returns 1 on failure."""
+  allowed_broken_targets_percentage = get_allowed_broken_targets_percentage()
+  if not test_all_outside_out(allowed_broken_targets_percentage):
+    return 1
+  return 0
+
+
+if __name__ == '__main__':
+  sys.exit(main())

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/base-images/base-runner/test_all_test.py

@@ -0,0 +1,38 @@
+# Copyright 2020 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+"""Tests test_all.py"""
+import unittest
+from unittest import mock
+
+import test_all
+
+
+class TestTestAll(unittest.TestCase):
+  """Tests for the test_all_function."""
+
+  @mock.patch('test_all.find_fuzz_targets', return_value=[])
+  @mock.patch('builtins.print')
+  def test_test_all_no_fuzz_targets(self, mock_print, _):
+    """Tests that test_all returns False when there are no fuzz targets."""
+    outdir = '/out'
+    allowed_broken_targets_percentage = 0
+    self.assertFalse(
+        test_all.test_all(outdir, allowed_broken_targets_percentage))
+    mock_print.assert_called_with('ERROR: No fuzz targets found.')
+
+
+if __name__ == '__main__':
+  unittest.main()

local-test-tika-full-01-vuln_8/fuzz-tooling/infra/tools/wycheproof/package.bash

@@ -0,0 +1,18 @@
+#!/bin/bash
+# Copyright 2022 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+################################################################################
+# Script for zipping ClusterFuzz's blackbox fuzzer for wycheproof.
+zip wycheproof.zip run.py launcher.py