Datasets:
File size: 2,617 Bytes
8c93514 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 | format spacetravlr_training_log v1
gene Acvr2b
seed_only false
per_cell_cnn_export true
cnn_epochs_config 10
learning_rate 0.0002
lasso_n_iter_max 100
lasso_tol 0.0001
# summary: cluster_id, n_cells, n_modulators, lasso_r2, lasso_train_mse, lasso_fista_iters, lasso_converged, cnn_epochs_ran, cnn_mse_first, cnn_mse_last
cluster_id n_cells n_modulators lasso_r2 lasso_train_mse lasso_fista_iters lasso_converged cnn_epochs_ran cnn_mse_first cnn_mse_last
0 263 637 0.776826 0.000012 100 false 10 0.000015 0.000014
1 752 637 0.566522 0.000005 100 false 10 0.000011 0.000006
2 4234 637 0.828186 0.000009 100 false 10 0.000069 0.000030
3 3435 637 0.256854 0.000005 100 false 10 0.000006 0.000006
4 77 637 0.237925 0.000016 100 false 10 0.000129 0.000037
5 220 637 0.551370 0.000018 100 false 10 0.000041 0.000027
6 2395 637 0.353627 0.000005 100 false 10 0.000006 0.000006
7 14 637 0.000000 0.000000 1 true 10 0.000000 0.000000
8 534 637 0.661425 0.000007 100 false 10 0.000018 0.000010
9 232 637 0.598667 0.000006 100 false 10 0.000024 0.000013
10 108 637 0.000000 0.000000 1 true 10 0.000000 0.000000
# cnn_mse_by_epoch: cluster_id, epoch, train_mse
cluster_id epoch train_mse
0 0 0.000015
0 1 0.000015
0 2 0.000015
0 3 0.000014
0 4 0.000014
0 5 0.000014
0 6 0.000014
0 7 0.000014
0 8 0.000014
0 9 0.000014
1 0 0.000011
1 1 0.000010
1 2 0.000008
1 3 0.000007
1 4 0.000006
1 5 0.000006
1 6 0.000006
1 7 0.000006
1 8 0.000006
1 9 0.000006
2 0 0.000069
2 1 0.000063
2 2 0.000058
2 3 0.000053
2 4 0.000048
2 5 0.000044
2 6 0.000040
2 7 0.000036
2 8 0.000033
2 9 0.000030
3 0 0.000006
3 1 0.000006
3 2 0.000006
3 3 0.000006
3 4 0.000006
3 5 0.000006
3 6 0.000006
3 7 0.000006
3 8 0.000006
3 9 0.000006
4 0 0.000129
4 1 0.000085
4 2 0.000052
4 3 0.000030
4 4 0.000019
4 5 0.000018
4 6 0.000023
4 7 0.000030
4 8 0.000035
4 9 0.000037
5 0 0.000041
5 1 0.000038
5 2 0.000036
5 3 0.000034
5 4 0.000032
5 5 0.000030
5 6 0.000029
5 7 0.000028
5 8 0.000027
5 9 0.000027
6 0 0.000006
6 1 0.000006
6 2 0.000006
6 3 0.000006
6 4 0.000006
6 5 0.000006
6 6 0.000006
6 7 0.000006
6 8 0.000006
6 9 0.000006
7 0 0.000000
7 1 0.000000
7 2 0.000000
7 3 0.000000
7 4 0.000000
7 5 0.000000
7 6 0.000000
7 7 0.000000
7 8 0.000000
7 9 0.000000
8 0 0.000018
8 1 0.000017
8 2 0.000016
8 3 0.000014
8 4 0.000013
8 5 0.000012
8 6 0.000011
8 7 0.000011
8 8 0.000010
8 9 0.000010
9 0 0.000024
9 1 0.000020
9 2 0.000018
9 3 0.000016
9 4 0.000015
9 5 0.000014
9 6 0.000014
9 7 0.000013
9 8 0.000013
9 9 0.000013
10 0 0.000000
10 1 0.000000
10 2 0.000000
10 3 0.000000
10 4 0.000000
10 5 0.000000
10 6 0.000000
10 7 0.000000
10 8 0.000000
10 9 0.000000
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