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Add xenium_skin_mixed sample13 SpaceTravLR outputs (no perturbations) (part 8)
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format spacetravlr_training_log v1
gene Abca8a
seed_only false
per_cell_cnn_export true
cnn_epochs_config 10
learning_rate 0.0002
lasso_n_iter_max 100
lasso_tol 0.0001
# summary: cluster_id, n_cells, n_modulators, lasso_r2, lasso_train_mse, lasso_fista_iters, lasso_converged, cnn_epochs_ran, cnn_mse_first, cnn_mse_last
cluster_id n_cells n_modulators lasso_r2 lasso_train_mse lasso_fista_iters lasso_converged cnn_epochs_ran cnn_mse_first cnn_mse_last
0 263 626 0.685112 0.000008 100 false 10 0.000194 0.000023
1 752 626 0.392904 0.000033 100 false 10 0.000133 0.000036
2 4234 626 0.374268 0.000047 100 false 10 0.000140 0.000059
3 3435 626 0.693048 0.003142 100 false 10 0.004443 0.003538
4 77 626 0.000000 0.000000 1 true 10 0.000000 0.000000
5 220 626 0.812069 0.000424 100 false 10 0.000543 0.000452
6 2395 626 0.304314 0.000064 100 false 10 0.000111 0.000070
7 14 626 0.000000 0.000000 1 true 10 0.000000 0.000000
8 534 626 0.529011 0.000896 100 false 10 0.001537 0.001028
9 232 626 0.939726 0.004987 100 false 10 0.034615 0.009933
10 108 626 0.000000 0.000000 1 true 10 0.000000 0.000000
# cnn_mse_by_epoch: cluster_id, epoch, train_mse
cluster_id epoch train_mse
0 0 0.000194
0 1 0.000166
0 2 0.000140
0 3 0.000116
0 4 0.000094
0 5 0.000074
0 6 0.000057
0 7 0.000043
0 8 0.000031
0 9 0.000023
1 0 0.000133
1 1 0.000117
1 2 0.000102
1 3 0.000087
1 4 0.000074
1 5 0.000063
1 6 0.000053
1 7 0.000046
1 8 0.000040
1 9 0.000036
2 0 0.000140
2 1 0.000126
2 2 0.000113
2 3 0.000102
2 4 0.000092
2 5 0.000083
2 6 0.000075
2 7 0.000069
2 8 0.000063
2 9 0.000059
3 0 0.004443
3 1 0.004188
3 2 0.004018
3 3 0.003908
3 4 0.003834
3 5 0.003776
3 6 0.003722
3 7 0.003665
3 8 0.003604
3 9 0.003538
4 0 0.000000
4 1 0.000000
4 2 0.000000
4 3 0.000000
4 4 0.000000
4 5 0.000000
4 6 0.000000
4 7 0.000000
4 8 0.000000
4 9 0.000000
5 0 0.000543
5 1 0.000510
5 2 0.000494
5 3 0.000488
5 4 0.000486
5 5 0.000482
5 6 0.000476
5 7 0.000468
5 8 0.000460
5 9 0.000452
6 0 0.000111
6 1 0.000099
6 2 0.000088
6 3 0.000080
6 4 0.000074
6 5 0.000071
6 6 0.000069
6 7 0.000068
6 8 0.000069
6 9 0.000070
7 0 0.000000
7 1 0.000000
7 2 0.000000
7 3 0.000000
7 4 0.000000
7 5 0.000000
7 6 0.000000
7 7 0.000000
7 8 0.000000
7 9 0.000000
8 0 0.001537
8 1 0.001386
8 2 0.001268
8 3 0.001181
8 4 0.001123
8 5 0.001086
8 6 0.001064
8 7 0.001050
8 8 0.001039
8 9 0.001028
9 0 0.034615
9 1 0.025113
9 2 0.017436
9 3 0.011905
9 4 0.008608
9 5 0.007350
9 6 0.007585
9 7 0.008528
9 8 0.009456
9 9 0.009933
10 0 0.000000
10 1 0.000000
10 2 0.000000
10 3 0.000000
10 4 0.000000
10 5 0.000000
10 6 0.000000
10 7 0.000000
10 8 0.000000
10 9 0.000000