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Add xenium_skin_mixed sample13 SpaceTravLR outputs (no perturbations) (part 8)
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format spacetravlr_training_log v1
gene Acacb
seed_only false
per_cell_cnn_export true
cnn_epochs_config 10
learning_rate 0.0002
lasso_n_iter_max 100
lasso_tol 0.0001
# summary: cluster_id, n_cells, n_modulators, lasso_r2, lasso_train_mse, lasso_fista_iters, lasso_converged, cnn_epochs_ran, cnn_mse_first, cnn_mse_last
cluster_id n_cells n_modulators lasso_r2 lasso_train_mse lasso_fista_iters lasso_converged cnn_epochs_ran cnn_mse_first cnn_mse_last
0 263 589 0.789897 0.000001 100 false 10 0.000008 0.000006
1 752 589 0.426493 0.000054 100 false 10 0.000393 0.000101
2 4234 589 0.723688 0.006401 100 false 10 0.009773 0.005691
3 3435 589 0.604418 0.000790 100 false 10 0.002240 0.001182
4 77 589 0.224712 0.000001 100 false 10 0.000007 0.000005
5 220 589 0.955819 0.000002 100 false 10 0.000006 0.000004
6 2395 589 0.321172 0.000037 100 false 10 0.000047 0.000045
7 14 589 0.000000 0.000000 1 true 10 0.000000 0.000000
8 534 589 0.923983 0.000320 100 false 10 0.000499 0.000396
9 232 589 0.426634 0.000009 100 false 10 0.000014 0.000012
10 108 589 0.728426 0.000012 100 false 10 0.000450 0.000074
# cnn_mse_by_epoch: cluster_id, epoch, train_mse
cluster_id epoch train_mse
0 0 0.000008
0 1 0.000008
0 2 0.000007
0 3 0.000007
0 4 0.000007
0 5 0.000007
0 6 0.000007
0 7 0.000007
0 8 0.000006
0 9 0.000006
1 0 0.000393
1 1 0.000203
1 2 0.000110
1 3 0.000105
1 4 0.000139
1 5 0.000167
1 6 0.000171
1 7 0.000154
1 8 0.000127
1 9 0.000101
2 0 0.009773
2 1 0.008153
2 2 0.007265
2 3 0.006953
2 4 0.006935
2 5 0.006925
2 6 0.006776
2 7 0.006477
2 8 0.006088
2 9 0.005691
3 0 0.002240
3 1 0.001899
3 2 0.001634
3 3 0.001441
3 4 0.001310
3 5 0.001228
3 6 0.001185
3 7 0.001169
3 8 0.001171
3 9 0.001182
4 0 0.000007
4 1 0.000007
4 2 0.000006
4 3 0.000006
4 4 0.000006
4 5 0.000006
4 6 0.000005
4 7 0.000005
4 8 0.000005
4 9 0.000005
5 0 0.000006
5 1 0.000006
5 2 0.000006
5 3 0.000005
5 4 0.000005
5 5 0.000005
5 6 0.000005
5 7 0.000005
5 8 0.000004
5 9 0.000004
6 0 0.000047
6 1 0.000046
6 2 0.000046
6 3 0.000046
6 4 0.000046
6 5 0.000046
6 6 0.000046
6 7 0.000045
6 8 0.000045
6 9 0.000045
7 0 0.000000
7 1 0.000000
7 2 0.000000
7 3 0.000000
7 4 0.000000
7 5 0.000000
7 6 0.000000
7 7 0.000000
7 8 0.000000
7 9 0.000000
8 0 0.000499
8 1 0.000483
8 2 0.000468
8 3 0.000455
8 4 0.000442
8 5 0.000430
8 6 0.000420
8 7 0.000411
8 8 0.000403
8 9 0.000396
9 0 0.000014
9 1 0.000014
9 2 0.000014
9 3 0.000013
9 4 0.000013
9 5 0.000013
9 6 0.000013
9 7 0.000012
9 8 0.000012
9 9 0.000012
10 0 0.000450
10 1 0.000366
10 2 0.000292
10 3 0.000230
10 4 0.000179
10 5 0.000140
10 6 0.000111
10 7 0.000092
10 8 0.000080
10 9 0.000074