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Add xenium_skin_mixed sample13 SpaceTravLR outputs (no perturbations) (part 8)
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format spacetravlr_training_log v1
gene Ace
seed_only false
per_cell_cnn_export true
cnn_epochs_config 10
learning_rate 0.0002
lasso_n_iter_max 100
lasso_tol 0.0001
# summary: cluster_id, n_cells, n_modulators, lasso_r2, lasso_train_mse, lasso_fista_iters, lasso_converged, cnn_epochs_ran, cnn_mse_first, cnn_mse_last
cluster_id n_cells n_modulators lasso_r2 lasso_train_mse lasso_fista_iters lasso_converged cnn_epochs_ran cnn_mse_first cnn_mse_last
0 263 676 0.835463 0.000108 100 false 10 0.000207 0.000124
1 752 676 0.904629 0.001171 100 false 10 0.008085 0.002496
2 4234 676 0.595973 0.000008 100 false 10 0.000100 0.000023
3 3435 676 0.925223 0.005403 100 false 10 0.008572 0.005983
4 77 676 0.561153 0.000000 100 false 10 0.000000 0.000000
5 220 676 0.932704 0.000199 100 false 10 0.001696 0.000417
6 2395 676 0.780159 0.000915 100 false 10 0.001830 0.001151
7 14 676 0.499856 0.000006 100 false 10 0.000180 0.000010
8 534 676 0.939262 0.000207 100 false 10 0.000329 0.000222
9 232 676 0.374465 0.000009 100 false 10 0.000009 0.000009
10 108 676 0.858770 0.000020 100 false 10 0.001120 0.000151
# cnn_mse_by_epoch: cluster_id, epoch, train_mse
cluster_id epoch train_mse
0 0 0.000207
0 1 0.000159
0 2 0.000134
0 3 0.000129
0 4 0.000132
0 5 0.000137
0 6 0.000139
0 7 0.000136
0 8 0.000131
0 9 0.000124
1 0 0.008085
1 1 0.005703
1 2 0.003967
1 3 0.002772
1 4 0.002085
1 5 0.001846
1 6 0.001929
1 7 0.002167
1 8 0.002395
1 9 0.002496
2 0 0.000100
2 1 0.000088
2 2 0.000077
2 3 0.000067
2 4 0.000057
2 5 0.000049
2 6 0.000041
2 7 0.000034
2 8 0.000028
2 9 0.000023
3 0 0.008572
3 1 0.007229
3 2 0.006461
3 3 0.006199
3 4 0.006266
3 5 0.006411
3 6 0.006453
3 7 0.006356
3 8 0.006175
3 9 0.005983
4 0 0.000000
4 1 0.000000
4 2 0.000000
4 3 0.000000
4 4 0.000000
4 5 0.000000
4 6 0.000000
4 7 0.000000
4 8 0.000000
4 9 0.000000
5 0 0.001696
5 1 0.001469
5 2 0.001263
5 3 0.001079
5 4 0.000917
5 5 0.000777
5 6 0.000658
5 7 0.000560
5 8 0.000480
5 9 0.000417
6 0 0.001830
6 1 0.001523
6 2 0.001307
6 3 0.001177
6 4 0.001121
6 5 0.001118
6 6 0.001138
6 7 0.001158
6 8 0.001164
6 9 0.001151
7 0 0.000180
7 1 0.000139
7 2 0.000103
7 3 0.000073
7 4 0.000049
7 5 0.000031
7 6 0.000019
7 7 0.000012
7 8 0.000009
7 9 0.000010
8 0 0.000329
8 1 0.000296
8 2 0.000277
8 3 0.000267
8 4 0.000258
8 5 0.000250
8 6 0.000241
8 7 0.000233
8 8 0.000227
8 9 0.000222
9 0 0.000009
9 1 0.000009
9 2 0.000009
9 3 0.000009
9 4 0.000009
9 5 0.000009
9 6 0.000009
9 7 0.000009
9 8 0.000009
9 9 0.000009
10 0 0.001120
10 1 0.000825
10 2 0.000587
10 3 0.000404
10 4 0.000275
10 5 0.000194
10 6 0.000152
10 7 0.000139
10 8 0.000142
10 9 0.000151