import numpy as np # arr_outcomes = np.load('../processed_data/arr_outcomes.npy', allow_pickle=True) # split randomization over folds """Use 9:1:1 split""" p_train = 0.80 p_val = 0.10 p_test = 0.10 n = 11988 # original 12000 patients, remove 12 outliers n_train = round(n*p_train) n_val = round(n*p_val) n_test = n - (n_train+n_val) print(n_train, n_val, n_test) Nsplits = 5 for j in range(Nsplits): p = np.random.permutation(n) idx_train = p[:n_train] idx_val = p[n_train:n_train+n_val] idx_test = p[n_train+n_val:] np.save('../splits/phy12_split'+str(j+1)+'.npy', (idx_train, idx_val, idx_test)) # np.save('../splits/phy12_split_subset'+str(j+1)+'.npy', (idx_train, idx_val, idx_test)) print('split IDs saved') # # check first split # idx_train,idx_val,idx_test = np.load('../splits/phy12_split1.npy', allow_pickle=True) # print(len(idx_train), len(idx_val), len(idx_test))