feat: DyMixOp benchmarks (small files)
Browse files- .gitattributes +2 -57
- 1dKS_1200x22x1x4096_dt1_t[100_120].mat +3 -0
- 2dBurgers_1200x20x2x64x64_dt0.0025_t[0_0.5]_nu0.005.mat +3 -0
- 2dDarcy_5keys_2048x1x1x241x241.mat +3 -0
- 2dNS_1200x20x1x64x64_dt1_t[10_30]_nu1e-05.mat +3 -0
- 3dBrusselator_1000x2x1x39x28x28_dt0.5_t[0_19].mat +3 -0
- 3dShallowWater_1200x30x2x64x32.mat +3 -0
- README.md +152 -0
.gitattributes
CHANGED
|
@@ -1,59 +1,4 @@
|
|
| 1 |
-
*.
|
| 2 |
-
*.
|
| 3 |
-
*.bin filter=lfs diff=lfs merge=lfs -text
|
| 4 |
-
*.bz2 filter=lfs diff=lfs merge=lfs -text
|
| 5 |
-
*.ckpt filter=lfs diff=lfs merge=lfs -text
|
| 6 |
-
*.ftz filter=lfs diff=lfs merge=lfs -text
|
| 7 |
-
*.gz filter=lfs diff=lfs merge=lfs -text
|
| 8 |
*.h5 filter=lfs diff=lfs merge=lfs -text
|
| 9 |
-
*.joblib filter=lfs diff=lfs merge=lfs -text
|
| 10 |
-
*.lfs.* filter=lfs diff=lfs merge=lfs -text
|
| 11 |
-
*.lz4 filter=lfs diff=lfs merge=lfs -text
|
| 12 |
-
*.mds filter=lfs diff=lfs merge=lfs -text
|
| 13 |
-
*.mlmodel filter=lfs diff=lfs merge=lfs -text
|
| 14 |
-
*.model filter=lfs diff=lfs merge=lfs -text
|
| 15 |
-
*.msgpack filter=lfs diff=lfs merge=lfs -text
|
| 16 |
-
*.npy filter=lfs diff=lfs merge=lfs -text
|
| 17 |
*.npz filter=lfs diff=lfs merge=lfs -text
|
| 18 |
-
*.onnx filter=lfs diff=lfs merge=lfs -text
|
| 19 |
-
*.ot filter=lfs diff=lfs merge=lfs -text
|
| 20 |
-
*.parquet filter=lfs diff=lfs merge=lfs -text
|
| 21 |
-
*.pb filter=lfs diff=lfs merge=lfs -text
|
| 22 |
-
*.pickle filter=lfs diff=lfs merge=lfs -text
|
| 23 |
-
*.pkl filter=lfs diff=lfs merge=lfs -text
|
| 24 |
-
*.pt filter=lfs diff=lfs merge=lfs -text
|
| 25 |
-
*.pth filter=lfs diff=lfs merge=lfs -text
|
| 26 |
-
*.rar filter=lfs diff=lfs merge=lfs -text
|
| 27 |
-
*.safetensors filter=lfs diff=lfs merge=lfs -text
|
| 28 |
-
saved_model/**/* filter=lfs diff=lfs merge=lfs -text
|
| 29 |
-
*.tar.* filter=lfs diff=lfs merge=lfs -text
|
| 30 |
-
*.tar filter=lfs diff=lfs merge=lfs -text
|
| 31 |
-
*.tflite filter=lfs diff=lfs merge=lfs -text
|
| 32 |
-
*.tgz filter=lfs diff=lfs merge=lfs -text
|
| 33 |
-
*.wasm filter=lfs diff=lfs merge=lfs -text
|
| 34 |
-
*.xz filter=lfs diff=lfs merge=lfs -text
|
| 35 |
-
*.zip filter=lfs diff=lfs merge=lfs -text
|
| 36 |
-
*.zst filter=lfs diff=lfs merge=lfs -text
|
| 37 |
-
*tfevents* filter=lfs diff=lfs merge=lfs -text
|
| 38 |
-
# Audio files - uncompressed
|
| 39 |
-
*.pcm filter=lfs diff=lfs merge=lfs -text
|
| 40 |
-
*.sam filter=lfs diff=lfs merge=lfs -text
|
| 41 |
-
*.raw filter=lfs diff=lfs merge=lfs -text
|
| 42 |
-
# Audio files - compressed
|
| 43 |
-
*.aac filter=lfs diff=lfs merge=lfs -text
|
| 44 |
-
*.flac filter=lfs diff=lfs merge=lfs -text
|
| 45 |
-
*.mp3 filter=lfs diff=lfs merge=lfs -text
|
| 46 |
-
*.ogg filter=lfs diff=lfs merge=lfs -text
|
| 47 |
-
*.wav filter=lfs diff=lfs merge=lfs -text
|
| 48 |
-
# Image files - uncompressed
|
| 49 |
-
*.bmp filter=lfs diff=lfs merge=lfs -text
|
| 50 |
-
*.gif filter=lfs diff=lfs merge=lfs -text
|
| 51 |
-
*.png filter=lfs diff=lfs merge=lfs -text
|
| 52 |
-
*.tiff filter=lfs diff=lfs merge=lfs -text
|
| 53 |
-
# Image files - compressed
|
| 54 |
-
*.jpg filter=lfs diff=lfs merge=lfs -text
|
| 55 |
-
*.jpeg filter=lfs diff=lfs merge=lfs -text
|
| 56 |
-
*.webp filter=lfs diff=lfs merge=lfs -text
|
| 57 |
-
# Video files - compressed
|
| 58 |
-
*.mp4 filter=lfs diff=lfs merge=lfs -text
|
| 59 |
-
*.webm filter=lfs diff=lfs merge=lfs -text
|
|
|
|
| 1 |
+
*.mat filter=lfs diff=lfs merge=lfs -text
|
| 2 |
+
*.nc filter=lfs diff=lfs merge=lfs -text
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 3 |
*.h5 filter=lfs diff=lfs merge=lfs -text
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 4 |
*.npz filter=lfs diff=lfs merge=lfs -text
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1dKS_1200x22x1x4096_dt1_t[100_120].mat
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:8989fd438cc4fdde9408c155c3279b28385ae024f11fa3ac056f357e2e8260cd
|
| 3 |
+
size 865075392
|
2dBurgers_1200x20x2x64x64_dt0.0025_t[0_0.5]_nu0.005.mat
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:a8a76a3dcecad15df4e5c7fafac6de2d022643bae94ae7575017df4db80fcf8d
|
| 3 |
+
size 1651507400
|
2dDarcy_5keys_2048x1x1x241x241.mat
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:d6efd80ef7321cf98bb500a47b7bfe9ed013f36b221b277d06509b867895ea9d
|
| 3 |
+
size 3806396936
|
2dNS_1200x20x1x64x64_dt1_t[10_30]_nu1e-05.mat
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:6d53765e48dd13907d39f683f10d95660bbce876b3ae44b8b283e05da947ee0e
|
| 3 |
+
size 2265449882
|
3dBrusselator_1000x2x1x39x28x28_dt0.5_t[0_19].mat
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9bd5bbb5b174c5ce9ac59df46770d77939f8819eb8152dc181e0368dc464f791
|
| 3 |
+
size 489216200
|
3dShallowWater_1200x30x2x64x32.mat
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:666f2f4b3d2d0f44ada933aaeb0da6d6b82457585327f74421c78f36b7011c55
|
| 3 |
+
size 1179648608
|
README.md
ADDED
|
@@ -0,0 +1,152 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
---
|
| 2 |
+
language:
|
| 3 |
+
- en
|
| 4 |
+
license: mit
|
| 5 |
+
tags:
|
| 6 |
+
- dynamical-systems
|
| 7 |
+
- pde
|
| 8 |
+
- operator-learning
|
| 9 |
+
- fluid-dynamics
|
| 10 |
+
- turbulence
|
| 11 |
+
- benchmark
|
| 12 |
+
- scientific-ml
|
| 13 |
+
pretty_name: DyMixOp Benchmarks
|
| 14 |
+
homepage: https://github.com/Lai-PY/DyMixOp
|
| 15 |
+
paper: https://arxiv.org/abs/2508.13490
|
| 16 |
+
size_categories:
|
| 17 |
+
- 1K<n<10K # Sample count range
|
| 18 |
+
---
|
| 19 |
+
|
| 20 |
+
# DyMixOp Benchmarks
|
| 21 |
+
|
| 22 |
+
**High-fidelity benchmark datasets for evaluating neural operators on multi-scale spatiotemporal dynamical systems.**
|
| 23 |
+
|
| 24 |
+
Part of the **DyMixOp** (Dynamical Mixture of Operators) framework for learning complex PDE solutions.
|
| 25 |
+
|
| 26 |
+
[](https://opensource.org/licenses/MIT)
|
| 27 |
+
[](https://arxiv.org/abs/2508.13490)
|
| 28 |
+
[]()
|
| 29 |
+
|
| 30 |
+
## π Available Datasets
|
| 31 |
+
|
| 32 |
+
| Dataset | PDE System | Spatial Dim | Resolution | Samples | Time Span | File Size | Key Parameters |
|
| 33 |
+
|---------|------------|-------------|------------|---------|-----------|-----------|----------------|
|
| 34 |
+
| [`1dKS`](./1dKS_1200x22x1x4096_dt1_t[100_120].mat) | Kuramoto-Sivashinsky | 1D | 4096 | 1,200 | tβ[100,120] | 845 MB | dt=1 |
|
| 35 |
+
| [`2dBurgers`](./2dBurgers_1200x20x2x64x64_dt0.0025_t[0_0.5]_nu0.005.mat) | 2D Burgers | 2D | 64Γ64 | 1,200 | tβ[0,0.5] | 1.6 GB | Ξ½=0.005, dt=0.0025 |
|
| 36 |
+
| [`2dCE-CRP`](./2dCE-CRP_1430x21x5x128x128_dt0.05_t[0_1].nc) | Cahn-Hilliard + Reaction-Diffusion | 2D | 128Γ128 | 1,430 | tβ[0,1] | 9.6 GB | 5 channels, dt=0.05 |
|
| 37 |
+
| [`2dDarcy`](./2dDarcy_5keys_2048x1x1x241x241.mat) | Darcy Flow | 2D | 241Γ241 | 2,048 | Steady-state | 3.7 GB | 5 permeability fields |
|
| 38 |
+
| [`2dNS`](./2dNS_1200x20x1x64x64_dt1_t[10_30]_nu1e-05.mat) | 2D Navier-Stokes | 2D | 64Γ64 | 1,200 | tβ[10,30] | 2.2 GB | Ξ½=1e-5, dt=1 |
|
| 39 |
+
| [`3dBrusselator`](./3dBrusselator_1000x2x1x39x28x28_dt0.5_t[0_19].mat) | 3D Brusselator | 3D | 39Γ28Γ28 | 1,000 | tβ[0,19] | 478 MB | dt=0.5 |
|
| 40 |
+
| [`3dShallowWater`](./3dShallowWater_1200x30x2x64x32.mat) | Shallow Water | 3D | 64Γ32 | 1,200 | 30 timesteps | 1.2 GB | 2 variables |
|
| 41 |
+
|
| 42 |
+
**Total: ~20GB across 7 benchmark datasets**
|
| 43 |
+
|
| 44 |
+
## π Quick Start
|
| 45 |
+
|
| 46 |
+
### Installation
|
| 47 |
+
|
| 48 |
+
```bash
|
| 49 |
+
pip install huggingface-hub numpy scipy
|
| 50 |
+
```
|
| 51 |
+
|
| 52 |
+
### Direct Download
|
| 53 |
+
|
| 54 |
+
```python
|
| 55 |
+
from huggingface_hub import hf_hub_download
|
| 56 |
+
import scipy.io as sio
|
| 57 |
+
|
| 58 |
+
# Download a specific dataset
|
| 59 |
+
file_path = hf_hub_download(
|
| 60 |
+
repo_id="Lai-PY/DyMixOp-Benchmarks",
|
| 61 |
+
filename="2dNS_1200x20x1x64x64_dt1_t[10_30]_nu1e-05.mat",
|
| 62 |
+
repo_type="dataset"
|
| 63 |
+
)
|
| 64 |
+
|
| 65 |
+
# Load the data
|
| 66 |
+
data = sio.loadmat(file_path)
|
| 67 |
+
print(data.keys()) # View available variables
|
| 68 |
+
```
|
| 69 |
+
|
| 70 |
+
### Batch Download Script
|
| 71 |
+
|
| 72 |
+
```python
|
| 73 |
+
from huggingface_hub import snapshot_download
|
| 74 |
+
import os
|
| 75 |
+
|
| 76 |
+
# Download all datasets
|
| 77 |
+
local_dir = "./DyMixOp_datasets"
|
| 78 |
+
os.makedirs(local_dir, exist_ok=True)
|
| 79 |
+
|
| 80 |
+
snapshot_download(
|
| 81 |
+
repo_id="Lai-PY/DyMixOp-Benchmarks",
|
| 82 |
+
repo_type="dataset",
|
| 83 |
+
local_dir=local_dir,
|
| 84 |
+
max_workers=4
|
| 85 |
+
)
|
| 86 |
+
```
|
| 87 |
+
|
| 88 |
+
## π Data Format Documentation
|
| 89 |
+
|
| 90 |
+
### File Naming Convention
|
| 91 |
+
|
| 92 |
+
```
|
| 93 |
+
{dimension}{system}_{samples}x{time_steps}x{channels}x{spatial_dims}_{params}.ext
|
| 94 |
+
```
|
| 95 |
+
|
| 96 |
+
### Data Structure
|
| 97 |
+
|
| 98 |
+
Most datasets are stored in MATLAB `.mat` format with the following structure:
|
| 99 |
+
|
| 100 |
+
```python
|
| 101 |
+
{
|
| 102 |
+
'u': array([...]), # Solution fields (main data)
|
| 103 |
+
't': array([...]), # Time coordinates
|
| 104 |
+
'x': array([...]), # Spatial coordinates
|
| 105 |
+
'params': {...}, # System parameters
|
| 106 |
+
'__header__': bytes, # MATLAB header
|
| 107 |
+
'__version__': str, # MATLAB version
|
| 108 |
+
'__globals__': [] # Global variables
|
| 109 |
+
}
|
| 110 |
+
```
|
| 111 |
+
|
| 112 |
+
### NetCDF Format (2dCE-CRP)
|
| 113 |
+
|
| 114 |
+
The Cahn-Hilliard dataset uses NetCDF format:
|
| 115 |
+
|
| 116 |
+
```python
|
| 117 |
+
import netCDF4 as nc
|
| 118 |
+
|
| 119 |
+
dataset = nc.Dataset('2dCE-CRP_1430x21x5x128x128_dt0.05_t[0_1].nc')
|
| 120 |
+
print(dataset.variables.keys()) # View available variables
|
| 121 |
+
```
|
| 122 |
+
|
| 123 |
+
## π¬ Benchmark Applications
|
| 124 |
+
|
| 125 |
+
These datasets are designed for evaluating:
|
| 126 |
+
|
| 127 |
+
- **Neural Operators**: FNO, DeepONet, etc.
|
| 128 |
+
- **Operator Learning**: Mapping between function spaces
|
| 129 |
+
- **Multi-scale Dynamics**: Capturing phenomena across scales
|
| 130 |
+
- **Long-term Prediction**: Temporal extrapolation capability
|
| 131 |
+
- **Uncertainty Quantification**: Robustness to parameter variations
|
| 132 |
+
|
| 133 |
+
## π Citation
|
| 134 |
+
|
| 135 |
+
If you use these benchmarks in your research, please cite:
|
| 136 |
+
|
| 137 |
+
```bibtex
|
| 138 |
+
@article{lai2025dymixop,
|
| 139 |
+
title={DyMixOp: Guiding Neural Operator Design for PDEs from a Complex Dynamics Perspective with Local-Global-Mixing},
|
| 140 |
+
author={Lai, Pengyu and Chen, Yixiao and Xu, Hui},
|
| 141 |
+
journal={arXiv preprint arXiv:2508.13490},
|
| 142 |
+
year={2025}
|
| 143 |
+
}
|
| 144 |
+
```
|
| 145 |
+
|
| 146 |
+
## π€ Contributing
|
| 147 |
+
|
| 148 |
+
We welcome contributions! Please see our [GitHub repository](https://github.com/Lai-PY/DyMixOp) for guidelines.
|
| 149 |
+
|
| 150 |
+
## π License
|
| 151 |
+
|
| 152 |
+
This project is licensed under the MIT License - see the [LICENSE](LICENSE) file for details.
|