| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "USP24", "chromosome": "chr1", "start": 55159655, "end": 55159655, "reference_allele": "T", "alternate_allele": "C", "amino_acid_change": "p.I342V", "effect": "missense_variant", "filter": "panel_of_normals", "dna_vaf": 0.4024390243902439}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "ERICH3", "chromosome": "chr1", "start": 74571494, "end": 74571494, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.E1406K", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.5116279069767442}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "KIF26B", "chromosome": "chr1", "start": 245419680, "end": 245419680, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "p.S367S", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.6588235294117647}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "USP34", "chromosome": "chr2", "start": 61189055, "end": 61189055, "reference_allele": "G", "alternate_allele": "C", "amino_acid_change": "p.L3296L", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.2348993288590604}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "ANTXR1", "chromosome": "chr2", "start": 69245305, "end": 69245305, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.S505S", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.2395833333333333}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "SCN9A", "chromosome": "chr2", "start": 166199365, "end": 166199365, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.V1758V", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.1866666666666666}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "FN1", "chromosome": "chr2", "start": 215397809, "end": 215397809, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.E1130*", "effect": "stop_gained", "filter": "PASS", "dna_vaf": 0.1808510638297872}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "SPHKAP", "chromosome": "chr2", "start": 228016738, "end": 228016738, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.R1372S", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1756756756756756}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "HRH1", "chromosome": "chr3", "start": 11259653, "end": 11259653, "reference_allele": "A", "alternate_allele": "G", "amino_acid_change": "p.M206V", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1717791411042944}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "LRRC2", "chromosome": "chr3", "start": 46519054, "end": 46519054, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.P359L", "effect": "missense_variant", "filter": "panel_of_normals", "dna_vaf": 0.2127659574468085}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "EPHB1", "chromosome": "chr3", "start": 135106533, "end": 135106533, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.A297A", "effect": "synonymous_variant", "filter": "panel_of_normals", "dna_vaf": 0.2037037037037037}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "PIK3CA", "chromosome": "chr3", "start": 179218303, "end": 179218303, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.E545K", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.3859649122807017}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "MCCC1", "chromosome": "chr3", "start": 183092485, "end": 183092485, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.R66H", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1361256544502617}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "ATP13A5", "chromosome": "chr3", "start": 193351184, "end": 193351185, "reference_allele": "AT", "alternate_allele": "-", "amino_acid_change": "p.Y208Cfs*36", "effect": "frameshift_variant", "filter": "PASS", "dna_vaf": 0.1818181818181818}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "UGT8", "chromosome": "chr4", "start": 114665726, "end": 114665727, "reference_allele": "AT", "alternate_allele": "-", "amino_acid_change": "p.I338Rfs*7", "effect": "frameshift_variant", "filter": "PASS", "dna_vaf": 0.2565789473684211}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "DAB2", "chromosome": "chr5", "start": 39383101, "end": 39383101, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.F286F", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.3591549295774648}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "AP3B1", "chromosome": "chr5", "start": 78216161, "end": 78216161, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.R227H", "effect": "missense_variant", "filter": "panel_of_normals", "dna_vaf": 0.1126760563380281}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "CAMK4", "chromosome": "chr5", "start": 111344098, "end": 111344098, "reference_allele": "A", "alternate_allele": "C", "amino_acid_change": "p.K79T", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.160919540229885}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "CTNNA1", "chromosome": "chr5", "start": 138929269, "end": 138929269, "reference_allele": "T", "alternate_allele": "A", "amino_acid_change": "p.S641S", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.075268817204301}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "TBC1D9B", "chromosome": "chr5", "start": 179867569, "end": 179867569, "reference_allele": "A", "alternate_allele": "G", "amino_acid_change": "", "effect": "intron_variant", "filter": "PASS", "dna_vaf": 0.4081632653061224}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "SDK1", "chromosome": "chr7", "start": 4149456, "end": 4149456, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.V1540I", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.3333333333333333}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "GUSB", "chromosome": "chr7", "start": 65974700, "end": 65974700, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.R357Q", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.3870967741935484}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "AKAP9", "chromosome": "chr7", "start": 91941143, "end": 91941143, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.A15V", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "MGAM", "chromosome": "chr7", "start": 142055662, "end": 142055662, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "p.R1140M", "effect": "missense_variant", "filter": "panel_of_normals", "dna_vaf": 0.3435114503816794}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "CSMD1", "chromosome": "chr8", "start": 3399427, "end": 3399427, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "p.A791E", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1133333333333333}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "SLC20A2", "chromosome": "chr8", "start": 42437370, "end": 42437370, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.R381H", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0769230769230769}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "C9orf3", "chromosome": "chr9", "start": 95082773, "end": 95082784, "reference_allele": "AGGAGCCAACTA", "alternate_allele": "-", "amino_acid_change": "", "effect": "intron_variant", "filter": "PASS", "dna_vaf": 0.1739130434782608}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "ZFP37", "chromosome": "chr9", "start": 113044071, "end": 113044071, "reference_allele": "T", "alternate_allele": "A", "amino_acid_change": "p.I183F", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.2403100775193798}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "EHMT1", "chromosome": "chr9", "start": 137777960, "end": 137777960, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.T699T", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.4}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "PIPSL", "chromosome": "chr10", "start": 93959221, "end": 93959221, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "", "effect": "non_coding_transcript_exon_variant;non_coding_transcript_variant", "filter": "PASS", "dna_vaf": 0.1764705882352941}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "UBQLN3", "chromosome": "chr11", "start": 5508046, "end": 5508046, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "p.L505M", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1481481481481481}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "TSG101", "chromosome": "chr11", "start": 18514722, "end": 18514723, "reference_allele": "-", "alternate_allele": "TG", "amino_acid_change": "p.A105Qfs*28", "effect": "frameshift_variant", "filter": "PASS", "dna_vaf": 0.0277777777777777}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "UEVLD", "chromosome": "chr11", "start": 18544781, "end": 18544781, "reference_allele": "T", "alternate_allele": "C", "amino_acid_change": "p.Y301C", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.221311475409836}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "PACSIN3", "chromosome": "chr11", "start": 47182543, "end": 47182543, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.R24H", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1142857142857142}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "SERPING1", "chromosome": "chr11", "start": 57600260, "end": 57600260, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.A145T", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.2222222222222222}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "ALG8", "chromosome": "chr11", "start": 78100973, "end": 78100973, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.K524K", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.2674418604651162}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "MTNR1B", "chromosome": "chr11", "start": 92981726, "end": 92981726, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.T168N", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.087248322147651}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "ZNF384", "chromosome": "chr12", "start": 6673404, "end": 6673404, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.S241S", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0784313725490196}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "DIP2B", "chromosome": "chr12", "start": 50718775, "end": 50718775, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "p.G973V", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.2195121951219512}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "ZNF10", "chromosome": "chr12", "start": 133156419, "end": 133156419, "reference_allele": "T", "alternate_allele": "G", "amino_acid_change": "p.H391Q", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.173076923076923}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "ATP7B", "chromosome": "chr13", "start": 51974170, "end": 51974170, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.P350P", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.34375}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "SPTB", "chromosome": "chr14", "start": 64773250, "end": 64773250, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.P1716P", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.15}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "RIN3", "chromosome": "chr14", "start": 92577375, "end": 92577375, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.R89W", "effect": "missense_variant", "filter": "panel_of_normals", "dna_vaf": 0.1875}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "C15orf48", "chromosome": "chr15", "start": 45430680, "end": 45430680, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "", "effect": "5_prime_UTR_variant", "filter": "PASS", "dna_vaf": 0.3103448275862069}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "MAPK6", "chromosome": "chr15", "start": 52063993, "end": 52063993, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "p.D387Y", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.2429906542056074}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "ADAMTS17", "chromosome": "chr15", "start": 100132043, "end": 100132043, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.G562E", "effect": "missense_variant", "filter": "panel_of_normals", "dna_vaf": 0.2857142857142857}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "PKD1", "chromosome": "chr16", "start": 2090120, "end": 2090120, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.P4173P", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.1052631578947368}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "PRSS8", "chromosome": "chr16", "start": 31132438, "end": 31132438, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.D232D", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.2677165354330709}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "CDH3", "chromosome": "chr16", "start": 68698305, "end": 68698305, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.A799T", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1578947368421052}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "CNTROB", "chromosome": "chr17", "start": 7944205, "end": 7944205, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.R510*", "effect": "stop_gained", "filter": "PASS", "dna_vaf": 0.3243243243243243}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "USP43", "chromosome": "chr17", "start": 9682865, "end": 9682865, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.R383H", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0638297872340425}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "MAP2K4", "chromosome": "chr17", "start": 12129164, "end": 12129164, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.P306R", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.475}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "ATAD5", "chromosome": "chr17", "start": 30893837, "end": 30893837, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.L1662F", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0476190476190476}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "NBR1", "chromosome": "chr17", "start": 43194477, "end": 43194477, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.S551F", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0977443609022556}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "CTC-260F20.3", "chromosome": "chr19", "start": 19535082, "end": 19535082, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.V122M", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.2068965517241379}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "SHANK1", "chromosome": "chr19", "start": 50713942, "end": 50713942, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "p.P216P", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.2058823529411764}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "VSIG10L", "chromosome": "chr19", "start": 51334200, "end": 51334200, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.R804C", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.2641509433962264}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "KIR3DL3", "chromosome": "chr19", "start": 54735283, "end": 54735283, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "p.G327V", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.3286875725900116}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "SULF2", "chromosome": "chr20", "start": 47683103, "end": 47683103, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.G319S", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0909090909090909}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "DIP2A", "chromosome": "chr21", "start": 46498612, "end": 46498612, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.S145C", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.3181818181818182}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "RPGR", "chromosome": "chrX", "start": 38297437, "end": 38297437, "reference_allele": "A", "alternate_allele": "G", "amino_acid_change": "p.S421P", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1333333333333333}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-D8-A1XY-01A", "genomic_data": {"mutated_gene": "SLC35A2", "chromosome": "chrX", "start": 48904652, "end": 48904652, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "", "effect": "intron_variant", "filter": "PASS", "dna_vaf": 0.2142857142857142}, "clinical_data": {"age": 74, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Alive", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "SDF4", "chromosome": "chr1", "start": 1223283, "end": 1223283, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.A180P", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0726643598615917}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "VPS13D", "chromosome": "chr1", "start": 12355987, "end": 12355987, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.D3256E", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0794701986754966}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "CYP4Z1", "chromosome": "chr1", "start": 47106140, "end": 47106140, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.S360R", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0833333333333333}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "MYSM1", "chromosome": "chr1", "start": 58685238, "end": 58685238, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.R138Q", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.092511013215859}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "FUBP1", "chromosome": "chr1", "start": 77970014, "end": 77970049, "reference_allele": "ATCTAAAAAAAAAAAAGAAAAATACCATCATAAACT", "alternate_allele": "-", "amino_acid_change": "p.X41_splice", "effect": "splice_acceptor_variant;coding_sequence_variant;intron_variant", "filter": "PASS", "dna_vaf": 0.056338028169014}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ADGRL4", "chromosome": "chr1", "start": 78891642, "end": 78891642, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.W631*", "effect": "stop_gained", "filter": "PASS", "dna_vaf": 0.2671755725190839}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "BCAR3", "chromosome": "chr1", "start": 93582559, "end": 93582559, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.L476F", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.09375}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "DPYD", "chromosome": "chr1", "start": 97305353, "end": 97305353, "reference_allele": "G", "alternate_allele": "C", "amino_acid_change": "p.T735T", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.057471264367816}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "C1orf162", "chromosome": "chr1", "start": 111478146, "end": 111478146, "reference_allele": "G", "alternate_allele": "C", "amino_acid_change": "", "effect": "3_prime_UTR_variant", "filter": "PASS", "dna_vaf": 0.0952380952380952}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ENSA", "chromosome": "chr1", "start": 150629438, "end": 150629438, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.A11A", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0502283105022831}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "SPTA1", "chromosome": "chr1", "start": 158685330, "end": 158685330, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.G14G", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.047191011235955}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "PYHIN1", "chromosome": "chr1", "start": 158939157, "end": 158939157, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.C163C", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0552884615384615}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ATP1A4", "chromosome": "chr1", "start": 160159082, "end": 160159082, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.K202K", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0643086816720257}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ATP1A4", "chromosome": "chr1", "start": 160173622, "end": 160173622, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.A632A", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0453172205438066}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "DHX9", "chromosome": "chr1", "start": 182843358, "end": 182843358, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.S59N", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.04}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ERVMER61-1", "chromosome": "chr1", "start": 187641227, "end": 187641227, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "", "effect": "non_coding_transcript_exon_variant;non_coding_transcript_variant", "filter": "PASS", "dna_vaf": 0.1428571428571428}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "CR1", "chromosome": "chr1", "start": 207581938, "end": 207581938, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.S1296F", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0284938941655359}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "CR1", "chromosome": "chr1", "start": 207623041, "end": 207623041, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.S1992Y", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.2211796246648793}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "GALNT2", "chromosome": "chr1", "start": 230249239, "end": 230249239, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.R291R", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.1338912133891213}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ASXL2", "chromosome": "chr2", "start": 25744362, "end": 25744362, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.D659N", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1483870967741935}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ZEB2", "chromosome": "chr2", "start": 144399425, "end": 144399425, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.E588Q", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0652503793626707}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "XIRP2", "chromosome": "chr2", "start": 167243768, "end": 167243768, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.V617V", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0451612903225806}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ZDBF2", "chromosome": "chr2", "start": 206306266, "end": 206306266, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "p.E580*", "effect": "stop_gained", "filter": "PASS", "dna_vaf": 0.1739130434782608}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "MAP2", "chromosome": "chr2", "start": 209723679, "end": 209723679, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "", "effect": "intron_variant", "filter": "PASS", "dna_vaf": 0.0764872521246459}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ABCA12", "chromosome": "chr2", "start": 214982313, "end": 214982313, "reference_allele": "T", "alternate_allele": "A", "amino_acid_change": "p.R1485W", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0495867768595041}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "IGSF10", "chromosome": "chr3", "start": 151448364, "end": 151448364, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.Q539H", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0387596899224806}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "GPR149", "chromosome": "chr3", "start": 154429640, "end": 154429640, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "", "effect": "5_prime_UTR_variant", "filter": "PASS", "dna_vaf": 0.0989010989010989}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "CLNK", "chromosome": "chr4", "start": 10490412, "end": 10490412, "reference_allele": "A", "alternate_allele": "G", "amino_acid_change": "", "effect": "3_prime_UTR_variant", "filter": "PASS", "dna_vaf": 0.0988372093023255}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "CENPE", "chromosome": "chr4", "start": 103146061, "end": 103146061, "reference_allele": "T", "alternate_allele": "A", "amino_acid_change": "p.E1394V", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0993589743589743}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "CXXC4", "chromosome": "chr4", "start": 104490925, "end": 104490925, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.G293A", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0509259259259259}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "NUDT6", "chromosome": "chr4", "start": 122912579, "end": 122912579, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.D163H", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0700934579439252}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "MFSD8", "chromosome": "chr4", "start": 127921935, "end": 127921935, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.G343R", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.060377358490566}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "GLRA3", "chromosome": "chr4", "start": 174643955, "end": 174643955, "reference_allele": "A", "alternate_allele": "G", "amino_acid_change": "p.V409A", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0511811023622047}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "DAB2", "chromosome": "chr5", "start": 39383163, "end": 39383163, "reference_allele": "G", "alternate_allele": "C", "amino_acid_change": "p.P266A", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0590163934426229}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "SLCO4C1", "chromosome": "chr5", "start": 102236959, "end": 102236959, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "p.P692T", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0776053215077605}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "CREBRF", "chromosome": "chr5", "start": 173108707, "end": 173108707, "reference_allele": "G", "alternate_allele": "C", "amino_acid_change": "p.E436Q", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1336405529953917}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ERVFRD-1", "chromosome": "chr6", "start": 11104234, "end": 11104234, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.A359A", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0522875816993464}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "HIST1H2AD", "chromosome": "chr6", "start": 26199067, "end": 26199067, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.L59L", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0458015267175572}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "HIST1H4F", "chromosome": "chr6", "start": 26240622, "end": 26240622, "reference_allele": "T", "alternate_allele": "C", "amino_acid_change": "p.V66A", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0742574257425742}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "CCHCR1", "chromosome": "chr6", "start": 31150195, "end": 31150195, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.L322L", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0837696335078534}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ADGRB3", "chromosome": "chr6", "start": 69361464, "end": 69361479, "reference_allele": "ACTATCAAGAAGTGAA", "alternate_allele": "-", "amino_acid_change": "p.S1399Dfs*6", "effect": "frameshift_variant", "filter": "PASS", "dna_vaf": 0.0308641975308641}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "NT5E", "chromosome": "chr6", "start": 85492170, "end": 85492170, "reference_allele": "T", "alternate_allele": "C", "amino_acid_change": "p.H518H", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.1243243243243243}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "SGK1", "chromosome": "chr6", "start": 134171661, "end": 134171661, "reference_allele": "G", "alternate_allele": "C", "amino_acid_change": "p.V286V", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.1616650532429816}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "GPER1", "chromosome": "chr7", "start": 1092113, "end": 1092113, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.L129M", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0933333333333333}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ITGB8", "chromosome": "chr7", "start": 20401864, "end": 20401864, "reference_allele": "A", "alternate_allele": "T", "amino_acid_change": "p.R475S", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1391304347826087}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "WBSCR27", "chromosome": "chr7", "start": 73834874, "end": 73834874, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.R203C", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0666666666666666}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "PCLO", "chromosome": "chr7", "start": 82915532, "end": 82915532, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.D4152H", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0902777777777777}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ABCB1", "chromosome": "chr7", "start": 87519437, "end": 87519437, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.G939A", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1188524590163934}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "PPP1R9A", "chromosome": "chr7", "start": 95120717, "end": 95120717, "reference_allele": "G", "alternate_allele": "T", "amino_acid_change": "p.D512Y", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.037199124726477}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ATP5J2", "chromosome": "chr7", "start": 99466166, "end": 99466166, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "", "effect": "5_prime_UTR_variant", "filter": "PASS", "dna_vaf": 0.0909090909090909}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "KMT2C", "chromosome": "chr7", "start": 152224051, "end": 152224051, "reference_allele": "T", "alternate_allele": "A", "amino_acid_change": "p.E1096V", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0808823529411764}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "SNTG1", "chromosome": "chr8", "start": 50752046, "end": 50752046, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.D444N", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0324324324324324}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "PXDNL", "chromosome": "chr8", "start": 51809367, "end": 51809367, "reference_allele": "G", "alternate_allele": "C", "amino_acid_change": "", "effect": "5_prime_UTR_variant", "filter": "PASS", "dna_vaf": 0.109090909090909}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ESRP1", "chromosome": "chr8", "start": 94705947, "end": 94705947, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "", "effect": "3_prime_UTR_variant", "filter": "PASS", "dna_vaf": 0.0717488789237668}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "COL22A1", "chromosome": "chr8", "start": 138596935, "end": 138596935, "reference_allele": "A", "alternate_allele": "T", "amino_acid_change": "p.L1467L", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0813397129186602}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "MTAP", "chromosome": "chr9", "start": 21837956, "end": 21837956, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.A132A", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0768049155145929}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "TMEM38B", "chromosome": "chr9", "start": 105705703, "end": 105705703, "reference_allele": "A", "alternate_allele": "G", "amino_acid_change": "p.P73P", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0512195121951219}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "COL5A1", "chromosome": "chr9", "start": 134824683, "end": 134824683, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.D1594D", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.1794871794871795}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "RP11-574M7.2", "chromosome": "chr11", "start": 50416147, "end": 50416147, "reference_allele": "T", "alternate_allele": "C", "amino_acid_change": "", "effect": "non_coding_transcript_exon_variant;non_coding_transcript_variant", "filter": "PASS", "dna_vaf": 0.0691399662731871}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "AHNAK", "chromosome": "chr11", "start": 62532615, "end": 62532615, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.P601L", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0804597701149425}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "EHD1", "chromosome": "chr11", "start": 64854369, "end": 64854369, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.P523P", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.1636363636363636}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "DDI1", "chromosome": "chr11", "start": 104037999, "end": 104037999, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.R393R", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0710659898477157}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "GRIA4", "chromosome": "chr11", "start": 105752987, "end": 105752987, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.S85F", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0372670807453416}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "NUAK1", "chromosome": "chr12", "start": 106067273, "end": 106067273, "reference_allele": "G", "alternate_allele": "C", "amino_acid_change": "p.S505R", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1009174311926605}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "RB1", "chromosome": "chr13", "start": 48381392, "end": 48381392, "reference_allele": "A", "alternate_allele": "G", "amino_acid_change": "p.K548K", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.047808764940239}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "GPC5", "chromosome": "chr13", "start": 91693690, "end": 91693690, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.V277I", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.160377358490566}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "UGGT2", "chromosome": "chr13", "start": 95936946, "end": 95936946, "reference_allele": "T", "alternate_allele": "A", "amino_acid_change": "p.Y652F", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0564971751412429}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "MYH7", "chromosome": "chr14", "start": 23415035, "end": 23415035, "reference_allele": "A", "alternate_allele": "G", "amino_acid_change": "p.M1840T", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0425531914893617}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "CHRNA5", "chromosome": "chr15", "start": 78590152, "end": 78590152, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.T254N", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0495495495495495}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "SALL1", "chromosome": "chr16", "start": 51139353, "end": 51139353, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.A957S", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.059322033898305}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "HYDIN", "chromosome": "chr16", "start": 71175707, "end": 71175707, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.S139L", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.058252427184466}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "GCSH", "chromosome": "chr16", "start": 81082831, "end": 81082831, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "", "effect": "3_prime_UTR_variant", "filter": "PASS", "dna_vaf": 0.0571428571428571}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "TP53", "chromosome": "chr17", "start": 7675173, "end": 7675173, "reference_allele": "C", "alternate_allele": "-", "amino_acid_change": "p.V147Lfs*23", "effect": "frameshift_variant", "filter": "PASS", "dna_vaf": 0.264}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "SRCIN1", "chromosome": "chr17", "start": 38562842, "end": 38562842, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.T273T", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0776255707762557}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "STAT3", "chromosome": "chr17", "start": 42323037, "end": 42323037, "reference_allele": "C", "alternate_allele": "G", "amino_acid_change": "p.V619L", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0415094339622641}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "CA10", "chromosome": "chr17", "start": 51653701, "end": 51653701, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.T167T", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.08}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "DGKE", "chromosome": "chr17", "start": 56848014, "end": 56848014, "reference_allele": "G", "alternate_allele": "C", "amino_acid_change": "p.G279G", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0508083140877598}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "TJP3", "chromosome": "chr19", "start": 3739097, "end": 3739097, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.R532W", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.125}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ANKRD24", "chromosome": "chr19", "start": 4217303, "end": 4217303, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.A715T", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0909090909090909}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "SYMPK", "chromosome": "chr19", "start": 45816512, "end": 45816512, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.A1108A", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.2272727272727272}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "SYNGR4", "chromosome": "chr19", "start": 48375636, "end": 48375636, "reference_allele": "A", "alternate_allele": "G", "amino_acid_change": "p.M119V", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0655737704918032}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "NLRP7", "chromosome": "chr19", "start": 54941520, "end": 54941520, "reference_allele": "T", "alternate_allele": "C", "amino_acid_change": "p.E64E", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.045822102425876}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "NLRP9", "chromosome": "chr19", "start": 55733426, "end": 55733426, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.L135L", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.0696721311475409}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ZNF582", "chromosome": "chr19", "start": 56390426, "end": 56390426, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.D29N", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0404040404040404}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "BPIFB6", "chromosome": "chr20", "start": 33039491, "end": 33039491, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.A349T", "effect": "missense_variant", "filter": "panel_of_normals", "dna_vaf": 0.1071428571428571}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "EYA2", "chromosome": "chr20", "start": 47143095, "end": 47143095, "reference_allele": "G", "alternate_allele": "A", "amino_acid_change": "p.E309K", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0967078189300411}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "ATP9A", "chromosome": "chr20", "start": 51676181, "end": 51676181, "reference_allele": "G", "alternate_allele": "C", "amino_acid_change": "p.T276S", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.0614035087719298}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "TSHZ2", "chromosome": "chr20", "start": 53253987, "end": 53253987, "reference_allele": "C", "alternate_allele": "A", "amino_acid_change": "p.L177M", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1889763779527559}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "PRR14L", "chromosome": "chr22", "start": 31716740, "end": 31716740, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.G367S", "effect": "missense_variant", "filter": "PASS", "dna_vaf": 0.1090487238979118}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "WDR13", "chromosome": "chrX", "start": 48600428, "end": 48600428, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.R211R", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.075}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |
| {"patient_data": {"patient_id": "TCGA-BH-A1F0-01A", "genomic_data": {"mutated_gene": "OPN1LW", "chromosome": "chrX", "start": 154150834, "end": 154150834, "reference_allele": "C", "alternate_allele": "T", "amino_acid_change": "p.V97V", "effect": "synonymous_variant", "filter": "PASS", "dna_vaf": 0.1007194244604316}, "clinical_data": {"age": 80, "menopause_status": "Post (prior bilateral ovariectomy OR >12 mo since LMP with no prior hysterectomy)", "gender": "female", "ethnicity": "white", "vital_status": "Dead", "tumor_stage": "stage iia"}}} | |