Update README.md

README.md

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-license: mit
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+---
+license: mit
+language:
+- en
+tags:
+- genetics
+- LLM
+- embeddings
+---
+
+# Variant Foundation Embeddings
+Here we present the variant level embeddings for large-scale genetic analyis as described in 'Incorporating LLM Embeddings for Variation Across the Human Genome,' based on curated annotations using high quality functional data from FAVOR, ClinVar, and GWAS Catalog. We currently present two versions of embeddings for the 1.5 million genetic variant HapMap3 & MEGA datasets using OpenAI's text-embedding-3-large (3072-dimensional) and Qwen3-embedding-0.6B (1024-dimensional) embeddings, with others coming soon. 
+
+Genetic variants are identified with their chromosome, position (hg38 build), reference allele based on UKB coding, alternate allele based on UKB coding, and their respective LLM embeddings. 
+
+### Dataset Schema (OpenAI text-embedding-3-large)
+
+| Field       | Type       | Description |
+|-------------|------------|-------------|
+| `chrom`     | string     | Chromosome (e.g., `"1"`, `"X"`) |
+| `pos`       |string      | Base-pair position (hg38 coordinate system) |
+| `ref_UKB`   | string     | Reference allele (A, C, G, T) |
+| `alt_UKB`   | string     | Alternate allele (A, C, G, T) |
+| `embedding` | list[float]| Embedding vector (dimension 3072, float32) |