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Datasets:
LiteFold
/
GO

Modalities:
Tabular
Text
Formats:
parquet
Size:
10K - 100K
Tags:
biology
ontology
gene-ontology
go
obo
parquet
Libraries:
Datasets
pandas
Polars
License:
Dataset card Data Studio Files
xet
 Community
GO
File size: 2,014 Bytes
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{
  "source": "LiteFold/GO",
  "data_version": "releases/2026-03-25",
  "ontology": "go",
  "license": "terms:license http://creativecommons.org/licenses/by/4.0/",
  "term_rows": 48291,
  "typedef_rows": 11,
  "go_basic_term_rows": 48291,
  "terms_in_go_basic": 48291,
  "splits": {
    "train": 43522,
    "test": 4769
  },
  "split_strategy": "deterministic sha256(go_id) % 10; bucket 0 is test, buckets 1-9 are train",
  "namespace_counts": {
    "biological_process": 30857,
    "molecular_function": 12839,
    "cellular_component": 4595
  },
  "obsolete_counts": {
    "False": 38560,
    "True": 9731
  },
  "top_relationship_types": {
    "part_of": 7094,
    "regulates": 2975,
    "negatively_regulates": 2656,
    "positively_regulates": 2656,
    "has_part": 807,
    "occurs_in": 174,
    "happens_during": 13,
    "ends_during": 1
  },
  "top_subsets": {
    "gocheck_obsoletion_candidate": 544,
    "gocheck_do_not_annotate": 460,
    "goslim_pir": 426,
    "goslim_synapse": 335,
    "goslim_chembl": 294,
    "goslim_drosophila": 173,
    "goslim_yeast": 155,
    "goslim_generic": 140,
    "goslim_metagenomics": 111,
    "goslim_prokaryote": 97,
    "goslim_plant": 97,
    "goslim_candida": 86,
    "goslim_pombe": 64,
    "goslim_plant_ribbon": 62,
    "goslim_euk_cellular_processes_ribbon": 61,
    "goslim_agr": 53,
    "goslim_prokaryote_ribbon": 49,
    "goslim_mouse": 45,
    "goslim_flybase_ribbon": 44,
    "goslim_virus": 20
  },
  "columns": [
    "go_id",
    "go_numeric_id",
    "name",
    "namespace",
    "definition",
    "definition_xrefs",
    "comment",
    "synonyms",
    "synonym_scopes",
    "alt_ids",
    "subsets",
    "xrefs",
    "is_a_ids",
    "relationship_edges",
    "relationship_types",
    "relationship_target_ids",
    "parent_ids",
    "intersection_of",
    "union_of",
    "disjoint_from",
    "replaced_by",
    "consider",
    "property_values",
    "created_by",
    "creation_date",
    "is_obsolete",
    "in_go_basic",
    "split_bucket"
  ]
}