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  # SwissSidechain Residues
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- This dataset contains a viewer-friendly Parquet table derived from the SwissSidechain archives in this repository. Each row is one unique residue entry from the L or D SMI archives, with parsed availability and summary fields for PDB, MOL2, CHARMM topology, GROMACS RTP/HDB, bundle files, and rotamer libraries.
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  The original ZIP archives remain in the repository. The default `datasets` configuration uses the normalized Parquet files under `data/` so that the Hugging Face Dataset Viewer and `load_dataset()` can read the residue table directly.
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-
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  The source library comments state that the SwissSidechain entries are copyright of the Swiss Institute of Bioinformatics, with non-profit use allowed when the content is not modified and the copyright statement is retained. Commercial use requires a license agreement. Check the original SwissSidechain terms before commercial use.
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  ## Splits
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  | `bbdep_rotamer_rows` | Rows in the backbone-dependent rotamer library for this residue code. |
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  | `split_bucket` | Deterministic split bucket from `sha256(entry_id) % 10`. |
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- ## Preparation
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- The normalization script used to create the Parquet files is included at `scripts/prepare_swisssidechain_dataset.py`.
 
 
 
 
 
 
 
 
 
 
 
 
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  # SwissSidechain Residues
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+ SwissSideChain is a molecular and structural database of non-natural amino-acid sidechains, including structures, rotamers, and molecular mechanics parameters.
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+ This dataset contains a viewer-friendly Parquet table derived from the SwissSidechain archives in this repository. Each row is one unique residue entry from the L or D SMI archives, with parsed availability and summary fields for PDB, MOL2, CHARMM topology, GROMACS RTP/HDB, bundle files, and rotamer libraries.
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  The original ZIP archives remain in the repository. The default `datasets` configuration uses the normalized Parquet files under `data/` so that the Hugging Face Dataset Viewer and `load_dataset()` can read the residue table directly.
 
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  The source library comments state that the SwissSidechain entries are copyright of the Swiss Institute of Bioinformatics, with non-profit use allowed when the content is not modified and the copyright statement is retained. Commercial use requires a license agreement. Check the original SwissSidechain terms before commercial use.
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  ## Splits
 
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  | `bbdep_rotamer_rows` | Rows in the backbone-dependent rotamer library for this residue code. |
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  | `split_bucket` | Deterministic split bucket from `sha256(entry_id) % 10`. |
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+ # Citation
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+ ```
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+ @article{gfeller2013swisssidechain,
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+ title = {{SwissSidechain}: a molecular and structural database of non-natural sidechains},
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+ author = {Gfeller, David and Michielin, Olivier and Zoete, Vincent},
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+ journal = {Nucleic Acids Research},
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+ volume = {41},
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+ number = {D1},
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+ pages = {D327--D332},
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+ year = {2013},
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+ doi = {10.1093/nar/gks991}
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+ }
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+ ```