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  1. .gitattributes +46 -0
  2. output/preprocess/Acute_Myeloid_Leukemia/GSE222124.csv +3 -0
  3. output/preprocess/Acute_Myeloid_Leukemia/GSE222616.csv +3 -0
  4. output/preprocess/Acute_Myeloid_Leukemia/GSE249638.csv +3 -0
  5. output/preprocess/Acute_Myeloid_Leukemia/GSE98578.csv +3 -0
  6. output/preprocess/Acute_Myeloid_Leukemia/clinical_data/GSE121291.csv +2 -0
  7. output/preprocess/Acute_Myeloid_Leukemia/clinical_data/GSE121431.csv +2 -0
  8. output/preprocess/Acute_Myeloid_Leukemia/clinical_data/GSE161532.csv +4 -0
  9. output/preprocess/Acute_Myeloid_Leukemia/clinical_data/GSE222124.csv +2 -0
  10. output/preprocess/Acute_Myeloid_Leukemia/clinical_data/GSE222169.csv +43 -0
  11. output/preprocess/Acute_Myeloid_Leukemia/clinical_data/GSE222616.csv +2 -0
  12. output/preprocess/Acute_Myeloid_Leukemia/clinical_data/GSE235070.csv +2 -0
  13. output/preprocess/Acute_Myeloid_Leukemia/clinical_data/GSE249638.csv +2 -0
  14. output/preprocess/Acute_Myeloid_Leukemia/clinical_data/GSE98578.csv +2 -0
  15. output/preprocess/Acute_Myeloid_Leukemia/clinical_data/TCGA.csv +201 -0
  16. output/preprocess/Acute_Myeloid_Leukemia/cohort_info.json +112 -0
  17. output/preprocess/Acute_Myeloid_Leukemia/gene_data/GSE121291.csv +0 -0
  18. output/preprocess/Acute_Myeloid_Leukemia/gene_data/GSE121431.csv +0 -0
  19. output/preprocess/Acute_Myeloid_Leukemia/gene_data/GSE161532.csv +3 -0
  20. output/preprocess/Acute_Myeloid_Leukemia/gene_data/GSE222124.csv +3 -0
  21. output/preprocess/Acute_Myeloid_Leukemia/gene_data/GSE222169.csv +3 -0
  22. output/preprocess/Acute_Myeloid_Leukemia/gene_data/GSE222616.csv +3 -0
  23. output/preprocess/Acute_Myeloid_Leukemia/gene_data/GSE235070.csv +0 -0
  24. output/preprocess/Acute_Myeloid_Leukemia/gene_data/GSE249638.csv +3 -0
  25. output/preprocess/Acute_Myeloid_Leukemia/gene_data/GSE98578.csv +3 -0
  26. output/preprocess/Acute_Myeloid_Leukemia/gene_data/GSE99612.csv +3 -0
  27. output/preprocess/Adrenocortical_Cancer/GSE19776.csv +0 -0
  28. output/preprocess/Adrenocortical_Cancer/GSE68606.csv +3 -0
  29. output/preprocess/Adrenocortical_Cancer/GSE75415.csv +0 -0
  30. output/preprocess/Adrenocortical_Cancer/GSE90713.csv +3 -0
  31. output/preprocess/Adrenocortical_Cancer/clinical_data/GSE108088.csv +2 -0
  32. output/preprocess/Adrenocortical_Cancer/clinical_data/GSE143383.csv +64 -0
  33. output/preprocess/Adrenocortical_Cancer/clinical_data/GSE19776.csv +4 -0
  34. output/preprocess/Adrenocortical_Cancer/clinical_data/GSE49278.csv +4 -0
  35. output/preprocess/Adrenocortical_Cancer/clinical_data/GSE68606.csv +4 -0
  36. output/preprocess/Adrenocortical_Cancer/clinical_data/GSE68950.csv +2 -0
  37. output/preprocess/Adrenocortical_Cancer/clinical_data/GSE75415.csv +3 -0
  38. output/preprocess/Adrenocortical_Cancer/clinical_data/GSE76019.csv +5 -0
  39. output/preprocess/Adrenocortical_Cancer/clinical_data/GSE90713.csv +2 -0
  40. output/preprocess/Adrenocortical_Cancer/clinical_data/TCGA.csv +93 -0
  41. output/preprocess/Adrenocortical_Cancer/cohort_info.json +112 -0
  42. output/preprocess/Adrenocortical_Cancer/gene_data/GSE108088.csv +3 -0
  43. output/preprocess/Adrenocortical_Cancer/gene_data/GSE143383.csv +3 -0
  44. output/preprocess/Adrenocortical_Cancer/gene_data/GSE19776.csv +0 -0
  45. output/preprocess/Adrenocortical_Cancer/gene_data/GSE67766.csv +0 -0
  46. output/preprocess/Adrenocortical_Cancer/gene_data/GSE75415.csv +0 -0
  47. output/preprocess/Adrenocortical_Cancer/gene_data/GSE76019.csv +0 -0
  48. output/preprocess/Age-Related_Macular_Degeneration/clinical_data/GSE67899.csv +2 -0
  49. output/preprocess/Age-Related_Macular_Degeneration/cohort_info.json +22 -0
  50. output/preprocess/Age-Related_Macular_Degeneration/gene_data/GSE67899.csv +1 -0
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88024,GSM1688025,GSM1688026,GSM1688027,GSM1688028,GSM1688029,GSM1688030,GSM1688031,GSM1688032,GSM1688033,GSM1688034,GSM1688035,GSM1688036,GSM1688037,GSM1688038,GSM1688039,GSM1688040,GSM1688041,GSM1688042,GSM1688043,GSM1688044,GSM1688045,GSM1688046,GSM1688047,GSM1688048,GSM1688049,GSM1688050,GSM1688051,GSM1688052,GSM1688053,GSM1688054,GSM1688055,GSM1688056,GSM1688057,GSM1688058,GSM1688059,GSM1688060,GSM1688061,GSM1688062,GSM1688063,GSM1688064,GSM1688065,GSM1688066,GSM1688067,GSM1688068,GSM1688069,GSM1688070,GSM1688071,GSM1688072,GSM1688073,GSM1688074,GSM1688075,GSM1688076,GSM1688077,GSM1688078,GSM1688079,GSM1688080,GSM1688081,GSM1688082,GSM1688083,GSM1688084,GSM1688085,GSM1688086,GSM1688087,GSM1688088,GSM1688089,GSM1688090,GSM1688091,GSM1688092,GSM1688093,GSM1688094,GSM1688095,GSM1688096,GSM1688097,GSM1688098,GSM1688099,GSM1688100,GSM1688101,GSM1688102,GSM1688103,GSM1688104,GSM1688105,GSM1688106,GSM1688107,GSM1688108,GSM1688109,GSM1688110,GSM1688111,GSM1688112,GSM1688113,GSM1688114,GSM1688115,GSM1688116,GSM1688117,GSM1688118,GSM1688119,GSM1688120,GSM1688121,GSM1688122,GSM1688123,GSM1688124,GSM1688125,GSM1688126,GSM1688127,GSM1688128,GSM1688129,GSM1688130,GSM1688131,GSM1688132,GSM1688133,GSM1688134,GSM1688135,GSM1688136,GSM1688137,GSM1688138,GSM1688139,GSM1688140,GSM1688141,GSM1688142,GSM1688143,GSM1688144,GSM1688145,GSM1688146,GSM1688147,GSM1688148,GSM1688149,GSM1688150,GSM1688151,GSM1688152,GSM1688153,GSM1688154,GSM1688155,GSM1688156,GSM1688157,GSM1688158,GSM1688159,GSM1688160,GSM1688161,GSM1688162,GSM1688163,GSM1688164,GSM1688165,GSM1688166,GSM1688167,GSM1688168,GSM1688169,GSM1688170,GSM1688171,GSM1688172,GSM1688173,GSM1688174,GSM1688175,GSM1688176,GSM1688177,GSM1688178,GSM1688179,GSM1688180,GSM1688181,GSM1688182,GSM1688183,GSM1688184,GSM1688185,GSM1688186,GSM1688187,GSM1688188,GSM1688189,GSM1688190,GSM1688191,GSM1688192,GSM1688193,GSM1688194,GSM1688195,GSM1688196,GSM1688197,GSM1688198,GSM1688199,GSM1688200,GSM1688201,GSM1688202,GSM1688203,GSM1688204,GSM1688205,GSM1688206,GSM1688207,GSM1688208,GSM1688209,GSM1688210,GSM1688211,GSM1688212,GSM1688213,GSM1688214,GSM1688215,GSM1688216,GSM1688217,GSM1688218,GSM1688219,GSM1688220,GSM1688221,GSM1688222,GSM1688223,GSM1688224,GSM1688225,GSM1688226,GSM1688227,GSM1688228,GSM1688229,GSM1688230,GSM1688231,GSM1688232,GSM1688233,GSM1688234,GSM1688235,GSM1688236,GSM1688237,GSM1688238,GSM1688239,GSM1688240,GSM1688241,GSM1688242,GSM1688243,GSM1688244,GSM1688245,GSM1688246,GSM1688247,GSM1688248,GSM1688249,GSM1688250,GSM1688251,GSM1688252,GSM1688253,GSM1688254,GSM1688255,GSM1688256,GSM1688257,GSM1688258,GSM1688259,GSM1688260,GSM1688261,GSM1688262,GSM1688263,GSM1688264,GSM1688265,GSM1688266,GSM1688267,GSM1688268,GSM1688269,GSM1688270,GSM1688271,GSM1688272,GSM1688273,GSM1688274,GSM1688275,GSM1688276,GSM1688277,GSM1688278,GSM1688279,GSM1688280,GSM1688281,GSM1688282,GSM1688283,GSM1688284,GSM1688285,GSM1688286,GSM1688287,GSM1688288,GSM1688289,GSM1688290,GSM1688291,GSM1688292,GSM1688293,GSM1688294,GSM1688295,GSM1688296,GSM1688297,GSM1688298,GSM1688299,GSM1688300,GSM1688301,GSM1688302,GSM1688303,GSM1688304,GSM1688305,GSM1688306,GSM1688307,GSM1688308,GSM1688309,GSM1688310,GSM1688311,GSM1688312,GSM1688313,GSM1688314,GSM1688315,GSM1688316,GSM1688317,GSM1688318,GSM1688319,GSM1688320,GSM1688321,GSM1688322,GSM1688323,GSM1688324,GSM1688325,GSM1688326,GSM1688327,GSM1688328,GSM1688329,GSM1688330,GSM1688331,GSM1688332,GSM1688333,GSM1688334,GSM1688335,GSM1688336,GSM1688337,GSM1688338,GSM1688339,GSM1688340,GSM1688341,GSM1688342,GSM1688343,GSM1688344,GSM1688345,GSM1688346,GSM1688347,GSM1688348,GSM1688349,GSM1688350,GSM1688351,GSM1688352,GSM1688353,GSM1688354,GSM1688355,GSM1688356,GSM1688357,GSM1688358,GSM1688359,GSM1688360,GSM1688361,GSM1688362,GSM1688363,GSM1688364,GSM1688365,GSM1688366,GSM1688367
2
+ Adrenocortical_Cancer,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
output/preprocess/Adrenocortical_Cancer/clinical_data/GSE75415.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ ,GSM1954726,GSM1954727,GSM1954728,GSM1954729,GSM1954730,GSM1954731,GSM1954732,GSM1954733,GSM1954734,GSM1954735,GSM1954736,GSM1954737,GSM1954738,GSM1954739,GSM1954740,GSM1954741,GSM1954742,GSM1954743,GSM1954744,GSM1954745,GSM1954746,GSM1954747,GSM1954748,GSM1954749,GSM1954750,GSM1954751,GSM1954752,GSM1954753,GSM1954754,GSM1954755,GSM1954756
2
+ Adrenocortical_Cancer,0.0,0.0,0.0,0.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,,0.0,0.0,0.0,0.0,0.0,0.0,0.0
3
+ Gender,0.0,0.0,0.0,0.0,0.0,1.0,0.0,1.0,0.0,1.0,0.0,0.0,1.0,1.0,0.0,1.0,1.0,1.0,0.0,0.0,0.0,0.0,0.0,,,,,,,,
output/preprocess/Adrenocortical_Cancer/clinical_data/GSE76019.csv ADDED
@@ -0,0 +1,5 @@
 
 
 
 
 
 
1
+ ,Adrenocortical_Cancer
2
+ 0,
3
+ 1,2.0
4
+ 2,
5
+ 3,
output/preprocess/Adrenocortical_Cancer/clinical_data/GSE90713.csv ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ ,GSM2411058,GSM2411059,GSM2411060,GSM2411061,GSM2411062,GSM2411063,GSM2411064,GSM2411065,GSM2411066,GSM2411067,GSM2411068,GSM2411069,GSM2411070,GSM2411071,GSM2411072,GSM2411073,GSM2411074,GSM2411075,GSM2411076,GSM2411077,GSM2411078,GSM2411079,GSM2411080,GSM2411081,GSM2411082,GSM2411083,GSM2411084,GSM2411085,GSM2411086,GSM2411087,GSM2411088,GSM2411089,GSM2411090,GSM2411091,GSM2411092,GSM2411093,GSM2411094,GSM2411095,GSM2411096,GSM2411097,GSM2411098,GSM2411099,GSM2411100,GSM2411101,GSM2411102,GSM2411103,GSM2411104,GSM2411105,GSM2411106,GSM2411107,GSM2411108,GSM2411109,GSM2411110,GSM2411111,GSM2411112,GSM2411113,GSM2411114,GSM2411115,GSM2411116,GSM2411117,GSM2411118,GSM2411119,GSM2411120
2
+ Adrenocortical_Cancer,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,0.0,0.0,0.0,0.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0
output/preprocess/Adrenocortical_Cancer/clinical_data/TCGA.csv ADDED
@@ -0,0 +1,93 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ sampleID,Adrenocortical_Cancer,Age,Gender
2
+ TCGA-OR-A5J1-01,1,58,1
3
+ TCGA-OR-A5J2-01,1,44,0
4
+ TCGA-OR-A5J3-01,1,23,0
5
+ TCGA-OR-A5J4-01,1,23,0
6
+ TCGA-OR-A5J5-01,1,30,1
7
+ TCGA-OR-A5J6-01,1,29,0
8
+ TCGA-OR-A5J7-01,1,30,0
9
+ TCGA-OR-A5J8-01,1,66,1
10
+ TCGA-OR-A5J9-01,1,22,0
11
+ TCGA-OR-A5JA-01,1,53,0
12
+ TCGA-OR-A5JB-01,1,52,1
13
+ TCGA-OR-A5JC-01,1,37,1
14
+ TCGA-OR-A5JD-01,1,57,0
15
+ TCGA-OR-A5JE-01,1,17,0
16
+ TCGA-OR-A5JF-01,1,69,0
17
+ TCGA-OR-A5JG-01,1,61,1
18
+ TCGA-OR-A5JH-01,1,32,0
19
+ TCGA-OR-A5JI-01,1,22,1
20
+ TCGA-OR-A5JJ-01,1,65,1
21
+ TCGA-OR-A5JK-01,1,49,1
22
+ TCGA-OR-A5JL-01,1,36,0
23
+ TCGA-OR-A5JM-01,1,25,0
24
+ TCGA-OR-A5JO-01,1,26,0
25
+ TCGA-OR-A5JP-01,1,40,1
26
+ TCGA-OR-A5JQ-01,1,26,0
27
+ TCGA-OR-A5JR-01,1,45,1
28
+ TCGA-OR-A5JS-01,1,65,0
29
+ TCGA-OR-A5JT-01,1,65,0
30
+ TCGA-OR-A5JU-01,1,58,0
31
+ TCGA-OR-A5JV-01,1,55,1
32
+ TCGA-OR-A5JW-01,1,47,1
33
+ TCGA-OR-A5JX-01,1,50,1
34
+ TCGA-OR-A5JY-01,1,68,0
35
+ TCGA-OR-A5JZ-01,1,60,1
36
+ TCGA-OR-A5K0-01,1,69,0
37
+ TCGA-OR-A5K1-01,1,48,1
38
+ TCGA-OR-A5K2-01,1,32,0
39
+ TCGA-OR-A5K3-01,1,53,1
40
+ TCGA-OR-A5K4-01,1,64,0
41
+ TCGA-OR-A5K5-01,1,59,0
42
+ TCGA-OR-A5K6-01,1,56,0
43
+ TCGA-OR-A5K8-01,1,39,1
44
+ TCGA-OR-A5K9-01,1,61,0
45
+ TCGA-OR-A5KB-01,1,61,0
46
+ TCGA-OR-A5KO-01,1,39,0
47
+ TCGA-OR-A5KP-01,1,45,0
48
+ TCGA-OR-A5KQ-01,1,20,0
49
+ TCGA-OR-A5KS-01,1,72,1
50
+ TCGA-OR-A5KT-01,1,44,0
51
+ TCGA-OR-A5KU-01,1,37,0
52
+ TCGA-OR-A5KV-01,1,17,0
53
+ TCGA-OR-A5KW-01,1,55,0
54
+ TCGA-OR-A5KX-01,1,25,0
55
+ TCGA-OR-A5KY-01,1,23,0
56
+ TCGA-OR-A5KZ-01,1,42,1
57
+ TCGA-OR-A5L1-01,1,37,0
58
+ TCGA-OR-A5L2-01,1,83,0
59
+ TCGA-OR-A5L3-01,1,67,0
60
+ TCGA-OR-A5L4-01,1,48,0
61
+ TCGA-OR-A5L5-01,1,77,0
62
+ TCGA-OR-A5L6-01,1,60,1
63
+ TCGA-OR-A5L8-01,1,36,0
64
+ TCGA-OR-A5L9-01,1,53,0
65
+ TCGA-OR-A5LA-01,1,52,0
66
+ TCGA-OR-A5LB-01,1,59,1
67
+ TCGA-OR-A5LC-01,1,71,0
68
+ TCGA-OR-A5LD-01,1,52,1
69
+ TCGA-OR-A5LE-01,1,14,1
70
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