web_data/sample_details/1AFX.json

{
  "contact_entropy_mean": "0.0427327465862233",
  "contact_persistence_mean": "0.2563636363636363",
  "dynamic_qc_status": "ready",
  "dynamics_preview_gif_path": "",
  "dynamics_preview_mp4_path": "visualizations/dynamics_preview/1AFX.mp4",
  "dynamics_preview_status": "ready",
  "family_group": "rRNA_lt25",
  "high_quality_flag": "yes",
  "label_8class": "rRNA",
  "md_simulation_status": "complete_100ns",
  "method": "Solution NMR",
  "original_main_type": "rRNA",
  "p_adaptability_mean": "1.4722865278070625",
  "p_rmsf_mean": "1.5687300183556296",
  "pdb_id": "1AFX",
  "primary_xtc_100ps_rna_only_path": "trajectories/primary_xtc_100ps_rna_only/1AFX.xtc",
  "primary_xtc_status": "ready",
  "priority_tier": "non_priority",
  "resolution": "",
  "rfam": "",
  "rg_mean": "2.364916007939953",
  "rmsd_mean": "2.900627613067627",
  "rna_only_pdb_path": "structures/rna_only_pdb/1AFX.pdb",
  "rna_type": "rRNA",
  "rna_type_confidence": "high",
  "rna_type_evidence": "rRNA",
  "rna_type_source": "RNAmd source annotation",
  "sequence": "GGUGUGAACACC",
  "size_nt": "12.0",
  "source_pdb_url": "https://www.rcsb.org/structure/1AFX",
  "standardized_name": "",
  "traj_frames_used": "10",
  "traj_failed": "0",
  "rmsd_std": "0.967062532901764",
  "rmsd_max": "3.2903735637664795",
  "rg_std": "0.0053179385731902",
  "rg_min": "2.3538807011294507",
  "rg_max": "2.3729991094087275",
  "conformational_variability": "0.9723804714749542",
  "contact_persistence_std": "0.4250192022886138",
  "contact_entropy_max": "1.0",
  "misato_frames_used": "10.0",
  "misato_failed": "0.0",
  "misato_p_atom_count": "11.0",
  "p_adaptability_std": "0.3340000035420581",
  "p_adaptability_min": "1.148113250732422",
  "p_adaptability_q25": "1.2529744505882263",
  "p_adaptability_median": "1.3627145290374756",
  "p_adaptability_q75": "1.506480038166046",
  "p_adaptability_max": "2.2783989906311035",
  "p_rmsf_std": "0.3239817190936252",
  "p_rmsf_min": "1.201517939567566",
  "p_rmsf_q25": "1.365648865699768",
  "p_rmsf_median": "1.429226040840149",
  "p_rmsf_q75": "1.7106472253799438",
  "p_rmsf_max": "2.146466016769409",
  "p_high_adapt_frac_0p2nm": "1.0",
  "p_high_adapt_frac_0p4nm": "1.0",
  "base_centroid_adaptability_mean": "2.806551049049235",
  "base_centroid_adaptability_std": "0.5122501167474237",
  "base_centroid_adaptability_min": "0.8900054693222046",
  "base_centroid_adaptability_q25": "2.4430794715881348",
  "base_centroid_adaptability_median": "2.7862868309021",
  "base_centroid_adaptability_q75": "3.166547894477844",
  "base_centroid_adaptability_max": "4.766602039337158",
  "adjacent_p_distance_std_mean": "0.2223040347918868",
  "adjacent_p_distance_std_std": "0.2352562186391827",
  "adjacent_p_distance_std_min": "0.0184851251542568",
  "adjacent_p_distance_std_q25": "0.0237327176146209",
  "adjacent_p_distance_std_median": "0.1092331781983375",
  "adjacent_p_distance_std_q75": "0.4044733494520187",
  "adjacent_p_distance_std_max": "0.6928709745407104",
  "adjacent_p_distance_mean": "0.7267887592315674",
  "long_contact_persistence_mean": "0.0194444444444444",
  "long_contact_persistence_std": "0.0517442666949921",
  "long_contact_persistence_min": "0.0",
  "long_contact_persistence_q25": "0.0",
  "long_contact_persistence_median": "0.0",
  "long_contact_persistence_q75": "0.0",
  "long_contact_persistence_max": "0.2",
  "long_contact_switching_mean": "0.0655555555555555",
  "long_contact_switching_std": "0.1710497725557039",
  "long_contact_switching_min": "0.0",
  "long_contact_switching_q25": "0.0",
  "long_contact_switching_median": "0.0",
  "long_contact_switching_q75": "0.0",
  "long_contact_switching_max": "0.6400000000000001",
  "long_contact_entropy_mean": "0.079190323782214",
  "long_contact_entropy_max": "0.7219280948873623",
  "stable_long_contact_frac": "0.0",
  "transient_long_contact_frac": "0.0555555555555555",
  "initial_long_contact_frac": "0.0",
  "lost_initial_contact_frac": "0.0",
  "gained_contact_frac": "0.0"
}