| { |
| "contact_entropy_mean": "0.0706510495550304", |
| "contact_persistence_mean": "0.2666666666666666", |
| "dynamic_qc_status": "ready", |
| "dynamics_preview_gif_path": "", |
| "dynamics_preview_mp4_path": "visualizations/dynamics_preview/1F85.mp4", |
| "dynamics_preview_status": "ready", |
| "family_group": "IRES_lt25", |
| "high_quality_flag": "yes", |
| "label_8class": "other", |
| "md_simulation_status": "complete_100ns", |
| "method": "Solution NMR", |
| "original_main_type": "IRES", |
| "p_adaptability_mean": "2.140812268623939", |
| "p_rmsf_mean": "2.250887100513165", |
| "pdb_id": "1F85", |
| "primary_xtc_100ps_rna_only_path": "trajectories/primary_xtc_100ps_rna_only/1F85.xtc", |
| "primary_xtc_status": "ready", |
| "priority_tier": "Tier2_extended_functional", |
| "resolution": "", |
| "rfam": "", |
| "rg_mean": "2.5343011954953663", |
| "rmsd_mean": "3.138844013214112", |
| "rna_only_pdb_path": "structures/rna_only_pdb/1F85.pdb", |
| "rna_type": "internal ribosome entry site", |
| "rna_type_confidence": "high", |
| "rna_type_evidence": "IRES | SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIIE | Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function.", |
| "rna_type_source": "RNAmd source annotation", |
| "sequence": "GGCCUGAUAGGGUC", |
| "size_nt": "14.0", |
| "source_pdb_url": "https://www.rcsb.org/structure/1F85", |
| "standardized_name": "", |
| "traj_frames_used": "10", |
| "traj_failed": "0", |
| "rmsd_std": "1.0464882850646973", |
| "rmsd_max": "3.5311851501464844", |
| "rg_std": "0.0058283856194916", |
| "rg_min": "2.523896250479253", |
| "rg_max": "2.544847113370806", |
| "conformational_variability": "1.0523166706841889", |
| "contact_persistence_std": "0.4238609673679799", |
| "contact_entropy_max": "0.9709505944546686", |
| "misato_frames_used": "10.0", |
| "misato_failed": "0.0", |
| "misato_p_atom_count": "13.0", |
| "p_adaptability_std": "0.428854809452143", |
| "p_adaptability_min": "1.4940400123596191", |
| "p_adaptability_q25": "1.7966487407684326", |
| "p_adaptability_median": "2.029142379760742", |
| "p_adaptability_q75": "2.513592004776001", |
| "p_adaptability_max": "2.826477766036988", |
| "p_rmsf_std": "0.3724919456244084", |
| "p_rmsf_min": "1.6761964559555054", |
| "p_rmsf_q25": "1.969312071800232", |
| "p_rmsf_median": "2.232482671737671", |
| "p_rmsf_q75": "2.5545296669006348", |
| "p_rmsf_max": "2.8517935276031494", |
| "p_high_adapt_frac_0p2nm": "1.0", |
| "p_high_adapt_frac_0p4nm": "1.0", |
| "base_centroid_adaptability_mean": "2.9903776753809668", |
| "base_centroid_adaptability_std": "0.5535874084389113", |
| "base_centroid_adaptability_min": "1.176940679550171", |
| "base_centroid_adaptability_q25": "2.5796319246292114", |
| "base_centroid_adaptability_median": "2.964020252227783", |
| "base_centroid_adaptability_q75": "3.363062858581543", |
| "base_centroid_adaptability_max": "5.198836326599121", |
| "adjacent_p_distance_std_mean": "0.6265959252292911", |
| "adjacent_p_distance_std_std": "0.2680340870198301", |
| "adjacent_p_distance_std_min": "0.0374237112700939", |
| "adjacent_p_distance_std_q25": "0.408427357673645", |
| "adjacent_p_distance_std_median": "0.7602851688861847", |
| "adjacent_p_distance_std_q75": "0.8465918004512787", |
| "adjacent_p_distance_std_max": "0.9153129458427428", |
| "adjacent_p_distance_mean": "0.9690030813217164", |
| "long_contact_persistence_mean": "0.0163636363636363", |
| "long_contact_persistence_std": "0.0369945271806832", |
| "long_contact_persistence_min": "0.0", |
| "long_contact_persistence_q25": "0.0", |
| "long_contact_persistence_median": "0.0", |
| "long_contact_persistence_q75": "0.0", |
| "long_contact_persistence_max": "0.1", |
| "long_contact_switching_mean": "0.0589090909090909", |
| "long_contact_switching_std": "0.1331802978504598", |
| "long_contact_switching_min": "0.0", |
| "long_contact_switching_q25": "0.0", |
| "long_contact_switching_median": "0.0", |
| "long_contact_switching_q75": "0.0", |
| "long_contact_switching_max": "0.36", |
| "long_contact_entropy_mean": "0.0767449678297934", |
| "long_contact_entropy_max": "0.4689955935892812", |
| "stable_long_contact_frac": "0.0", |
| "transient_long_contact_frac": "0.0", |
| "initial_long_contact_frac": "0.0", |
| "lost_initial_contact_frac": "0.0", |
| "gained_contact_frac": "0.0" |
| } |
|
|
