{
  "contact_persistence_rows": 534519,
  "database_name": "RNAmd",
  "dynamic_preview_gif_ready": 5,
  "dynamic_preview_mp4_ready": 882,
  "dynamic_preview_ready": 882,
  "dynamic_qc_rows": 882,
  "generated_date": "2026-05-26",
  "length_bins": {
    "41-80 nt": 253,
    "<=40 nt": 610,
    ">80 nt": 19
  },
  "md_simulation_complete": 882,
  "method_counts": {
    "Electron microscopy": 67,
    "Solution NMR": 374,
    "X-ray diffraction": 441
  },
  "other_generic_structured_rna_count": 210,
  "other_refined_type_count": 407,
  "other_refined_type_counts": {
    "7SK RNA": 4,
    "CRISPR guide RNA": 23,
    "IRE": 1,
    "MALAT1-associated small cytoplasmic RNA/MEN beta RNA": 2,
    "RNase MRP RNA": 1,
    "RNase P RNA": 2,
    "SRP RNA": 6,
    "U6 snRNA": 3,
    "UnaL2 LINE 3' element": 1,
    "aptamer": 4,
    "cis-regulatory RNA element": 1,
    "internal ribosome entry site": 21,
    "miR-16 precursor": 1,
    "mir-15 microRNA precursor family": 1,
    "mir-2985-2 precursor": 1,
    "mir-31 microRNA precursor family": 1,
    "pre-miRNA": 19,
    "psi RNA packaging signal": 2,
    "rRNA": 12,
    "regulatory ncRNA": 1,
    "ribozyme": 1,
    "short structured RNA": 43,
    "snRNA": 16,
    "structured RNA": 127,
    "structured hairpin RNA": 40,
    "tRNA": 3,
    "telomerase RNA": 21,
    "tmRNA": 1,
    "viral packaging signal": 4,
    "viral regulatory RNA": 44
  },
  "parquet_status": {
    "contact_persistence_labels_v1.parquet": "ready",
    "residue_flexibility_labels_v1.parquet": "ready"
  },
  "primary_xtc_ready": 882,
  "raw_trr_server_archive_available": 882,
  "release": "v1",
  "residue_flexibility_rows": 28242,
  "rna_class_counts": {
    "aptamer": 57,
    "cis_regulatory_RNA_element": 73,
    "other": 407,
    "rRNA": 56,
    "riboswitch": 59,
    "ribozyme": 39,
    "tRNA": 116,
    "viral_regulatory_RNA": 75
  },
  "rna_type_confidence_counts": {
    "high": 559,
    "low": 170,
    "medium": 153
  },
  "rna_type_counts": {
    "7SK RNA": 4,
    "CRISPR guide RNA": 23,
    "Cyclic di-GMP-II riboswitch": 1,
    "DUF2693-FD RNA": 1,
    "Dengue virus SLA": 3,
    "Enterovirus 5' cloverleaf cis-acting replication element": 3,
    "Flavivirus 3' UTR cis-acting replication element (CRE)": 1,
    "Fluoride riboswitch": 2,
    "Glycine riboswitch": 1,
    "Group II catalytic intron": 2,
    "Guanidine-I riboswitch": 1,
    "Guanidine-III riboswitch": 1,
    "HBV_epsilon": 1,
    "Hairpin ribozyme": 1,
    "Hammerhead ribozyme (type III)": 1,
    "Hepatitis delta virus ribozyme": 2,
    "IRE": 1,
    "K10 TLS": 2,
    "MALAT1-associated small cytoplasmic RNA/MEN beta RNA": 3,
    "Mammalian CPEB3 ribozyme": 2,
    "NMT1 RNA": 1,
    "Nanos 3' UTR translation control element": 2,
    "PreQ1": 2,
    "PreQ1-II riboswitches": 1,
    "PrrB/RsmZ RNA family": 1,
    "Purine riboswitch": 10,
    "RNase MRP RNA": 1,
    "RNase P RNA": 2,
    "Retroviral readthrough element": 1,
    "SAH (S-adenosyl-L-homocysteine) riboswitch aptamer": 1,
    "SAM-III riboswitch aptamer (SMK box)": 1,
    "SAM-V riboswitch": 1,
    "SAM-VI (S-adenosyl methionine) riboswitch aptamer": 1,
    "SAM/SAH riboswitch": 1,
    "SRP RNA": 6,
    "Sarbecovirus 5'UTR": 1,
    "Selenocysteine transfer RNA": 1,
    "T-box leader": 1,
    "THF-II riboswitch (folE RNA)": 2,
    "TPP riboswitch (THI element)": 2,
    "ToxI antitoxin": 1,
    "U6 snRNA": 3,
    "UnaL2 LINE 3' element": 1,
    "Y RNA-like": 1,
    "ZMP/ZTP riboswitch": 2,
    "aptamer": 61,
    "azaaromatic riboswitch aptamer (yjdF RNA)": 1,
    "cis-regulatory RNA element": 71,
    "glnA": 1,
    "internal ribosome entry site": 21,
    "miR-16 precursor": 1,
    "mir-15 microRNA precursor family": 1,
    "mir-2985-2 precursor": 1,
    "mir-31 microRNA precursor family": 1,
    "nadA RNA": 4,
    "pre-miRNA": 19,
    "psi RNA packaging signal": 2,
    "rRNA": 67,
    "regulatory ncRNA": 1,
    "riboswitch": 22,
    "ribozyme": 30,
    "s2m RNA": 1,
    "salivarius-1 RNA": 1,
    "short structured RNA": 43,
    "snRNA": 16,
    "structured RNA": 127,
    "structured hairpin RNA": 40,
    "tRNA": 112,
    "telomerase RNA": 21,
    "tmRNA": 2,
    "tracrRNA": 1,
    "type-P1 twister ribozyme": 2,
    "viral packaging signal": 4,
    "viral regulatory RNA": 105
  },
  "sample_dynamic_targets_rows": 882,
  "samples": 882,
  "trajectory_policy": "all entries are completed 100 ns MD simulations; primary public trajectory product is RNA-only 100 ps XTC; raw full-system TRR remains in the server archive and is deferred from v1 public downloads",
  "unique_pdb_ids": 882,
  "visualization_policy": "sample-level RNA dynamics previews use existing PBC-fixed MP4 when available, with GIF fallback"
}