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pauldoucet commited on
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0e29b21
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1 Parent(s): 78ed54a

Delete COAD

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Files changed (26) hide show
  1. COAD/adata/ZEN38.h5ad +0 -3
  2. COAD/adata/ZEN42.h5ad +0 -3
  3. COAD/adata/ZEN44.h5ad +0 -3
  4. COAD/adata/ZEN45.h5ad +0 -3
  5. COAD/adata/ZEN46.h5ad +0 -3
  6. COAD/adata/ZEN47.h5ad +0 -3
  7. COAD/mean_50genes.json +0 -1
  8. COAD/patches/ZEN38.h5 +0 -3
  9. COAD/patches/ZEN42.h5 +0 -3
  10. COAD/patches/ZEN44.h5 +0 -3
  11. COAD/patches/ZEN45.h5 +0 -3
  12. COAD/patches/ZEN46.h5 +0 -3
  13. COAD/patches/ZEN47.h5 +0 -3
  14. COAD/patches/vis/ZEN38.png +0 -3
  15. COAD/patches/vis/ZEN42.png +0 -3
  16. COAD/patches/vis/ZEN44.png +0 -3
  17. COAD/patches/vis/ZEN45.png +0 -3
  18. COAD/patches/vis/ZEN46.png +0 -3
  19. COAD/patches/vis/ZEN47.png +0 -3
  20. COAD/splits/test_0.csv +0 -3
  21. COAD/splits/test_1.csv +0 -3
  22. COAD/splits/test_2.csv +0 -3
  23. COAD/splits/train_0.csv +0 -5
  24. COAD/splits/train_1.csv +0 -5
  25. COAD/splits/train_2.csv +0 -5
  26. COAD/var_50genes.json +0 -1
COAD/adata/ZEN38.h5ad DELETED
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COAD/adata/ZEN42.h5ad DELETED
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COAD/adata/ZEN47.h5ad DELETED
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COAD/mean_50genes.json DELETED
@@ -1 +0,0 @@
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- {"genes": ["S100A6", "EEF1A1", "TMSB10", "B2M", "MT-CO2", "RPL13", "RPL17", "MT-CO3", "RPL41", "RPS12", "RPLP1", "FTH1", "CD74", "TPT1", "RPL37A", "RPS19", "ACTG1", "RPL37", "RPS2", "RPS29", "RPS27", "ACTB", "RPS18", "RPL13A", "RPL28", "RPL36", "RPL39", "RPS21", "HLA-B", "MT-ATP6", "RPLP2", "FTL", "RPS8", "RPS6", "PIGR", "RPS28", "RPS15", "TMSB4X", "IGKC", "RPL32", "MT-ND4", "RPL29", "RPL8", "RPS15A", "RPL35", "RPS4X", "RPL34", "RPL10", "RPL18A", "MT-ND3"]}
 
 
COAD/patches/ZEN38.h5 DELETED
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COAD/patches/ZEN42.h5 DELETED
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COAD/patches/ZEN44.h5 DELETED
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COAD/patches/ZEN45.h5 DELETED
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COAD/patches/ZEN46.h5 DELETED
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COAD/patches/ZEN47.h5 DELETED
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COAD/patches/vis/ZEN38.png DELETED

Git LFS Details

  • SHA256: 13fcb3fa5c8a14bb6f819be57357dbcea9b9001952d6d54b79ddd35e240c1f9c
  • Pointer size: 132 Bytes
  • Size of remote file: 3.43 MB
COAD/patches/vis/ZEN42.png DELETED

Git LFS Details

  • SHA256: ff0d20502c197d0c1e583e8140f3d36f6ed879398efc3cb146f13f7dca66afe1
  • Pointer size: 132 Bytes
  • Size of remote file: 3.83 MB
COAD/patches/vis/ZEN44.png DELETED

Git LFS Details

  • SHA256: ef94242e1b96065d59f41b8bc933af77a8bfaecf0797d86bf0adb30468ffa7c8
  • Pointer size: 132 Bytes
  • Size of remote file: 3.6 MB
COAD/patches/vis/ZEN45.png DELETED

Git LFS Details

  • SHA256: 92ff04beeb0e3ab57a0bdc96e87cd79a27c03f05c9d4cdb1117e815def81e202
  • Pointer size: 132 Bytes
  • Size of remote file: 3.38 MB
COAD/patches/vis/ZEN46.png DELETED

Git LFS Details

  • SHA256: 82daac48012a65763d04a4b3f6e25c2535e73b1ed593e2e5a34fdfb361b09ba5
  • Pointer size: 132 Bytes
  • Size of remote file: 4.49 MB
COAD/patches/vis/ZEN47.png DELETED

Git LFS Details

  • SHA256: 17d6ea985e279cc81f84f631f6e23109263e035eeb577a4ffbdfbdcc1d06fd20
  • Pointer size: 132 Bytes
  • Size of remote file: 4.82 MB
COAD/splits/test_0.csv DELETED
@@ -1,3 +0,0 @@
1
- sample_id,patches_path,expr_path
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- ZEN47,patches/ZEN47.h5,adata/ZEN47.h5ad
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- ZEN46,patches/ZEN46.h5,adata/ZEN46.h5ad
 
 
 
 
COAD/splits/test_1.csv DELETED
@@ -1,3 +0,0 @@
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- sample_id,patches_path,expr_path
2
- ZEN45,patches/ZEN45.h5,adata/ZEN45.h5ad
3
- ZEN44,patches/ZEN44.h5,adata/ZEN44.h5ad
 
 
 
 
COAD/splits/test_2.csv DELETED
@@ -1,3 +0,0 @@
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- sample_id,patches_path,expr_path
2
- ZEN42,patches/ZEN42.h5,adata/ZEN42.h5ad
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- ZEN38,patches/ZEN38.h5,adata/ZEN38.h5ad
 
 
 
 
COAD/splits/train_0.csv DELETED
@@ -1,5 +0,0 @@
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- sample_id,patches_path,expr_path
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- ZEN45,patches/ZEN45.h5,adata/ZEN45.h5ad
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- ZEN44,patches/ZEN44.h5,adata/ZEN44.h5ad
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- ZEN42,patches/ZEN42.h5,adata/ZEN42.h5ad
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- ZEN38,patches/ZEN38.h5,adata/ZEN38.h5ad
 
 
 
 
 
 
COAD/splits/train_1.csv DELETED
@@ -1,5 +0,0 @@
1
- sample_id,patches_path,expr_path
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- ZEN47,patches/ZEN47.h5,adata/ZEN47.h5ad
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- ZEN46,patches/ZEN46.h5,adata/ZEN46.h5ad
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- ZEN42,patches/ZEN42.h5,adata/ZEN42.h5ad
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- ZEN38,patches/ZEN38.h5,adata/ZEN38.h5ad
 
 
 
 
 
 
COAD/splits/train_2.csv DELETED
@@ -1,5 +0,0 @@
1
- sample_id,patches_path,expr_path
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- ZEN47,patches/ZEN47.h5,adata/ZEN47.h5ad
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- ZEN46,patches/ZEN46.h5,adata/ZEN46.h5ad
4
- ZEN45,patches/ZEN45.h5,adata/ZEN45.h5ad
5
- ZEN44,patches/ZEN44.h5,adata/ZEN44.h5ad
 
 
 
 
 
 
COAD/var_50genes.json DELETED
@@ -1 +0,0 @@
1
- {"genes": ["AC008397.1", "ALDH1A3", "ANPEP", "ANTXR1", "ATP8B1", "C3", "CCDC80", "CCL20", "CDHR5", "CEACAM1", "CHI3L1", "CNN1", "COL11A1", "COL8A1", "CTHRC1", "CYP27A1", "DEPP1", "FILIP1L", "G0S2", "GGT6", "GPA33", "HK2", "IGHG1", "IGHG3", "IGLC2", "INSIG1", "ITGA11", "KLK1", "LRRC75A", "LTBP2", "MAOA", "MFAP2", "MUC20", "OLFML2B", "PDPN", "PI3", "PIM2", "RGS16", "S100A9", "SAA1", "SERPINA1", "SLC26A2", "SPP1", "ST6GALNAC1", "TFF1", "THBD", "TM4SF5", "TNFRSF11A", "WFDC2", "WNT5A"]}