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Upload LOL-EVE Ultra Rare Variants dataset v1.0

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  1. dataset/dataset_info.json +64 -0
dataset/dataset_info.json ADDED
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+ {
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+ "citation": "",
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+ "description": "\n Ultra Rare Variants dataset for LOL-EVE model evaluation.\n \n This dataset contains ultra rare variants from gnomAD with:\n - Genomic coordinates and variant information\n - Sequence information (WT and variant sequences)\n - Minor allele frequency (MAF) annotations\n - Variant filtering information\n \n The dataset is designed for evaluating variant effect prediction models\n on ultra rare variant prioritization tasks.\n ",
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+ "features": {
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+ "gene": {
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+ "dtype": "string",
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+ "_type": "Value"
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+ },
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+ "species": {
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+ "dtype": "string",
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+ "_type": "Value"
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+ },
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+ "clade": {
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+ "dtype": "string",
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+ "_type": "Value"
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+ },
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+ "chromosome": {
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+ "dtype": "string",
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+ "_type": "Value"
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+ },
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+ "position": {
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+ "dtype": "int64",
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+ "_type": "Value"
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+ },
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+ "ref": {
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+ "dtype": "string",
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+ "_type": "Value"
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+ },
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+ "alt": {
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+ "dtype": "string",
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+ "_type": "Value"
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+ },
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+ "variant_type": {
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+ "dtype": "string",
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+ "_type": "Value"
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+ },
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+ "wt_sequence": {
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+ "dtype": "string",
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+ "_type": "Value"
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+ },
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+ "var_sequence": {
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+ "dtype": "string",
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+ "_type": "Value"
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+ },
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+ "sequence_length": {
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+ "dtype": "int64",
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+ "_type": "Value"
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+ },
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+ "wt_sequence_start": {
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+ "dtype": "int64",
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+ "_type": "Value"
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+ },
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+ "filter": {
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+ "dtype": "string",
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+ "_type": "Value"
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+ },
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+ "maf": {
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+ "dtype": "float32",
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+ "_type": "Value"
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+ }
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+ },
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+ "homepage": "https://huggingface.co/Marks-lab/LOL-EVE",
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+ "license": "mit"
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+ }