Download MedEvalKit/models/HealthGPT/utils.py from Master-Shi/ExplainableVQA: direct link, hf CLI and curl.
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https://huggingface.co/datasets/Master-Shi/ExplainableVQA/resolve/main/MedEvalKit/models/HealthGPT/utils.py
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hf download hf://datasets/Master-Shi/ExplainableVQA/MedEvalKit/models/HealthGPT/utils.py
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curl -L -o utils.py https://huggingface.co/datasets/Master-Shi/ExplainableVQA/resolve/main/MedEvalKit/models/HealthGPT/utils.py
3.73 kB
| import torch | |
| import transformers | |
| import tokenizers | |
| import os, sys | |
| from dataclasses import dataclass, field | |
| import argparse | |
| from PIL import Image | |
| def expand2square(pil_img, background_color): | |
| width, height = pil_img.size | |
| if width == height: | |
| return pil_img | |
| elif width > height: | |
| result = Image.new(pil_img.mode, (width, width), background_color) | |
| result.paste(pil_img, (0, (width - height) // 2)) | |
| return result | |
| else: | |
| result = Image.new(pil_img.mode, (height, height), background_color) | |
| result.paste(pil_img, ((height - width) // 2, 0)) | |
| return result | |
| def find_all_linear_names(model): | |
| cls = torch.nn.Linear | |
| lora_module_names = set() | |
| multimodal_keywords = ['mm_projector', 'vision_tower', 'vision_resampler'] | |
| for name, module in model.named_modules(): | |
| if any(mm_keyword in name for mm_keyword in multimodal_keywords): | |
| continue | |
| if isinstance(module, cls): | |
| names = name.split('.') | |
| lora_module_names.add(names[0] if len(names) == 1 else names[-1]) | |
| if 'lm_head' in lora_module_names: # needed for 16-bit | |
| lora_module_names.remove('lm_head') | |
| return list(lora_module_names) | |
| def add_special_tokens_and_resize_model(tokenizer, model, vq_idx_nums=8192): | |
| if len(tokenizer.additional_special_tokens) != 0: | |
| return tokenizer.additional_special_tokens | |
| index_tokens = [f"<idx_{i}>" for i in range(vq_idx_nums)] | |
| special_tokens = { | |
| 'additional_special_tokens': ['<start_index>'] + index_tokens + ['<end_index>'] + ['<pixel_newline>'] | |
| } | |
| num_new_tokens = tokenizer.add_special_tokens(special_tokens) | |
| model.resize_token_embeddings(len(tokenizer)) | |
| if num_new_tokens > 0: | |
| input_embeddings = model.get_input_embeddings().weight.data | |
| output_embeddings = model.get_output_embeddings().weight.data | |
| input_embeddings_avg = input_embeddings[:-num_new_tokens].mean( | |
| dim=0, keepdim=True) | |
| output_embeddings_avg = output_embeddings[:-num_new_tokens].mean( | |
| dim=0, keepdim=True) | |
| input_embeddings[-num_new_tokens:] = input_embeddings_avg | |
| output_embeddings[-num_new_tokens:] = output_embeddings_avg | |
| return num_new_tokens | |
| com_vision_args = argparse.Namespace( | |
| freeze_backbone=False, | |
| mm_patch_merge_type='flat', | |
| mm_projector_type='mlp2x_gelu', | |
| mm_use_im_patch_token=False, | |
| mm_use_im_start_end=False, | |
| mm_vision_select_feature='patch', | |
| mm_vision_select_layer=-2, | |
| model_name_or_path=None, | |
| pretrain_mm_mlp_adapter=None, | |
| tune_mm_mlp_adapter=False, | |
| version=None, | |
| vision_tower=None | |
| ) | |
| gen_vision_args = argparse.Namespace( | |
| freeze_backbone=False, | |
| mm_patch_merge_type='flat', | |
| mm_projector_type='mlp2x_gelu', | |
| mm_use_im_patch_token=False, | |
| mm_use_im_start_end=False, | |
| mm_vision_select_feature='patch', | |
| mm_vision_select_layer=1, | |
| model_name_or_path=None, | |
| pretrain_mm_mlp_adapter=None, | |
| tune_mm_mlp_adapter=False, | |
| version=None, | |
| vision_tower=None | |
| ) | |
| def load_weights(model, hlora_path, fusion_layer_path=None): | |
| hlora_weights = torch.load(hlora_path) | |
| hlora_unexpected_keys = model.load_state_dict(hlora_weights, strict=False)[1] | |
| if hlora_unexpected_keys: | |
| print(f"Warning: Unexpected keys in hlora checkpoint: {hlora_unexpected_keys}") | |
| if fusion_layer_path: | |
| fusion_layer_weights = torch.load(fusion_layer_path) | |
| fusion_layer_unexpected_keys = model.load_state_dict(fusion_layer_weights, strict=False)[1] | |
| if fusion_layer_unexpected_keys: | |
| print(f"Warning: Unexpected keys in fusion_layer checkpoint: {fusion_layer_unexpected_keys}") | |
| return model |