tsurubee commited on
Commit
73a2df8
·
verified ·
1 Parent(s): ef4f86e

Update README.md

Browse files
Files changed (1) hide show
  1. README.md +88 -1
README.md CHANGED
@@ -8,4 +8,91 @@ tags:
8
  - provenance
9
  - graph
10
  - PROV-DM
11
- ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
8
  - provenance
9
  - graph
10
  - PROV-DM
11
+ pretty_name: MatPROV
12
+ ---
13
+
14
+ # MatPROV
15
+
16
+ **MatPROV** is a dataset of materials synthesis procedures extracted from scientific papers using large language models (LLMs) and represented in [PROV-DM](https://www.w3.org/TR/prov-dm/)–compliant structures.
17
+
18
+ ---
19
+
20
+ ## Files
21
+
22
+ ```
23
+ MatPROV/
24
+ ├── MatPROV.jsonl # Main dataset (2,367 synthesis procedures)
25
+ ├── ground-truth/ # Expert-annotated ground truth
26
+ │ └─ <DOI>.json
27
+ ├── few-shot/. # Prompt examples used for synthesis procedure extraction
28
+ │ └─ <DOI>.txt
29
+ └── doi_status.csv # Status of each paper DOI across the pipeline
30
+ ```
31
+
32
+ ---
33
+
34
+ ## Data format
35
+
36
+ The main dataset file is `MatPROV.jsonl`, where each line corresponds to one paper’s structured record.
37
+ Each record contains:
38
+
39
+ - `doi`: DOI of the source paper
40
+ - `label`: Identifier for the extracted synthesis procedure, encoding the material's chemical composition and key synthesis characteristics (e.g., `CuGaTe2_ball-milling`)
41
+ - `prov_jsonld`: A PROV-JSONLD structure describing the synthesis procedure
42
+
43
+ ### Example
44
+
45
+ ```json
46
+ {
47
+ "doi": "10.1002/advs.201600035",
48
+ "label": "Fe1+xNb0.75Ti0.25Sb_composition variation",
49
+ "prov_jsonld": {
50
+ "@context": [
51
+ {"xsd": "http://www.w3.org/2001/XMLSchema#", "prov": "http://www.w3.org/ns/prov#"},
52
+ "https://openprovenance.org/prov-jsonld/context.jsonld",
53
+ "URL of MatPROV's context schema omitted for double-blind review"
54
+ ],
55
+ "@graph": [
56
+ {
57
+ "@type": "Entity",
58
+ "@id": "e1",
59
+ "label": [{"@value": "Fe", "@language": "EN"}],
60
+ "type": [{"@value": "material"}],
61
+ "matprov:purity": [{"@value": "99.97%", "@type": "xsd:string"}]
62
+ }
63
+ ...
64
+ ]
65
+ }
66
+ }
67
+ ```
68
+
69
+ ## Dataset construction summary
70
+
71
+ - Source papers collected: 1648
72
+ - **Relevant Text Extraction**
73
+ - 32 papers contained no synthesis-related text
74
+ - → 1616 papers remained
75
+ - **Synthesis Procedure Extraction**
76
+ - 48 papers contained no synthesis procedure
77
+ - → 1568 papers remained (final dataset)
78
+
79
+ The DOIs of these 1568 papers and their extracted data are included in `MatPROV.jsonl`.
80
+ For details on the filtering status of each DOI, see `doi_status.csv`.
81
+
82
+ ## Ground Truth annotations
83
+
84
+ - A subset of papers was manually annotated by a single domain expert.
85
+ - Files are stored in `ground-truth/` and named as `<DOI>.json`.
86
+
87
+ ## Few-shot examples
88
+
89
+ - Prompt examples used for LLM extraction are provided in `few-shot/`.
90
+ - Files are stored in `few-shot/` and named as `<DOI>.txt`.
91
+
92
+ ## Citation
93
+
94
+ If you use MatPROV, please cite:
95
+
96
+ ```
97
+ TBD
98
+ ```