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import cython |
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import collections |
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import os |
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import re, sys, time |
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from glob import iglob |
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from io import StringIO |
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from os.path import relpath as _relpath |
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from .Cache import Cache, FingerprintFlags |
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from collections.abc import Iterable |
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try: |
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import pythran |
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except: |
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pythran = None |
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from .. import Utils |
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from ..Utils import (cached_function, cached_method, path_exists, |
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safe_makedirs, copy_file_to_dir_if_newer, is_package_dir, write_depfile) |
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from ..Compiler import Errors |
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from ..Compiler.Main import Context |
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from ..Compiler import Options |
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from ..Compiler.Options import (CompilationOptions, default_options, |
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get_directive_defaults) |
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join_path = cached_function(os.path.join) |
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copy_once_if_newer = cached_function(copy_file_to_dir_if_newer) |
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safe_makedirs_once = cached_function(safe_makedirs) |
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def _make_relative(file_paths, base=None): |
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if not base: |
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base = os.getcwd() |
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if base[-1] != os.path.sep: |
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base += os.path.sep |
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return [_relpath(path, base) if path.startswith(base) else path |
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for path in file_paths] |
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def extended_iglob(pattern): |
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if '{' in pattern: |
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m = re.match('(.*){([^}]+)}(.*)', pattern) |
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if m: |
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before, switch, after = m.groups() |
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for case in switch.split(','): |
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for path in extended_iglob(before + case + after): |
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yield path |
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return |
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if '**/' in pattern or os.sep == '\\' and '**\\' in pattern: |
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seen = set() |
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first, rest = re.split(r'\*\*[%s]' % ('/\\\\' if os.sep == '\\' else '/'), pattern, 1) |
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if first: |
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first = iglob(first + os.sep) |
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else: |
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first = [''] |
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for root in first: |
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for path in extended_iglob(join_path(root, rest)): |
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if path not in seen: |
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seen.add(path) |
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yield path |
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for path in extended_iglob(join_path(root, '*', '**', rest)): |
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if path not in seen: |
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seen.add(path) |
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yield path |
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else: |
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for path in iglob(pattern): |
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yield path |
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def nonempty(it, error_msg="expected non-empty iterator"): |
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empty = True |
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for value in it: |
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empty = False |
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yield value |
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if empty: |
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raise ValueError(error_msg) |
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def update_pythran_extension(ext): |
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if pythran is None: |
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raise RuntimeError("You first need to install Pythran to use the np_pythran directive.") |
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try: |
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pythran_ext = pythran.config.make_extension(python=True) |
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except TypeError: |
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pythran_ext = pythran.config.make_extension() |
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ext.include_dirs.extend(pythran_ext['include_dirs']) |
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ext.extra_compile_args.extend(pythran_ext['extra_compile_args']) |
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ext.extra_link_args.extend(pythran_ext['extra_link_args']) |
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ext.define_macros.extend(pythran_ext['define_macros']) |
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ext.undef_macros.extend(pythran_ext['undef_macros']) |
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ext.library_dirs.extend(pythran_ext['library_dirs']) |
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ext.libraries.extend(pythran_ext['libraries']) |
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ext.language = 'c++' |
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for bad_option in ["-fwhole-program", "-fvisibility=hidden"]: |
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try: |
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ext.extra_compile_args.remove(bad_option) |
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except ValueError: |
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pass |
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def parse_list(s): |
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""" |
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>>> parse_list("") |
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[] |
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>>> parse_list("a") |
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['a'] |
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>>> parse_list("a b c") |
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['a', 'b', 'c'] |
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>>> parse_list("[a, b, c]") |
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['a', 'b', 'c'] |
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>>> parse_list('a " " b') |
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['a', ' ', 'b'] |
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>>> parse_list('[a, ",a", "a,", ",", ]') |
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['a', ',a', 'a,', ','] |
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""" |
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if len(s) >= 2 and s[0] == '[' and s[-1] == ']': |
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s = s[1:-1] |
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delimiter = ',' |
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else: |
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delimiter = ' ' |
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s, literals = strip_string_literals(s) |
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def unquote(literal): |
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literal = literal.strip() |
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if literal[0] in "'\"": |
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return literals[literal[1:-1]] |
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else: |
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return literal |
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return [unquote(item) for item in s.split(delimiter) if item.strip()] |
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transitive_str = object() |
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transitive_list = object() |
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bool_or = object() |
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distutils_settings = { |
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'name': str, |
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'sources': list, |
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'define_macros': list, |
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'undef_macros': list, |
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'libraries': transitive_list, |
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'library_dirs': transitive_list, |
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'runtime_library_dirs': transitive_list, |
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'include_dirs': transitive_list, |
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'extra_objects': list, |
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'extra_compile_args': transitive_list, |
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'extra_link_args': transitive_list, |
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'export_symbols': list, |
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'depends': transitive_list, |
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'language': transitive_str, |
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'np_pythran': bool_or |
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} |
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def _legacy_strtobool(val): |
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if val == "True": |
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return True |
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elif val == "False": |
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return False |
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import warnings |
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warnings.warn("The 'np_python' option requires 'True' or 'False'", category=DeprecationWarning) |
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val = val.lower() |
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if val in ('y', 'yes', 't', 'true', 'on', '1'): |
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return True |
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elif val in ('n', 'no', 'f', 'false', 'off', '0'): |
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return False |
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else: |
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raise ValueError("invalid truth value %r" % (val,)) |
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class DistutilsInfo: |
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def __init__(self, source=None, exn=None): |
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self.values = {} |
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if source is not None: |
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source_lines = StringIO(source) if isinstance(source, str) else source |
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for line in source_lines: |
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line = line.lstrip() |
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if not line: |
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continue |
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if line[0] != '#': |
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break |
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line = line[1:].lstrip() |
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kind = next((k for k in ("distutils:","cython:") if line.startswith(k)), None) |
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if kind is not None: |
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key, _, value = [s.strip() for s in line[len(kind):].partition('=')] |
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type = distutils_settings.get(key, None) |
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if line.startswith("cython:") and type is None: continue |
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if type in (list, transitive_list): |
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value = parse_list(value) |
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if key == 'define_macros': |
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value = [tuple(macro.split('=', 1)) |
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if '=' in macro else (macro, None) |
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for macro in value] |
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if type is bool_or: |
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value = _legacy_strtobool(value) |
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self.values[key] = value |
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elif exn is not None: |
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for key in distutils_settings: |
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if key in ('name', 'sources','np_pythran'): |
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continue |
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value = getattr(exn, key, None) |
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if value: |
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self.values[key] = value |
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def merge(self, other): |
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if other is None: |
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return self |
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for key, value in other.values.items(): |
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type = distutils_settings[key] |
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if type is transitive_str and key not in self.values: |
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self.values[key] = value |
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elif type is transitive_list: |
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if key in self.values: |
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all = self.values[key][:] |
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for v in value: |
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if v not in all: |
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all.append(v) |
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value = all |
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self.values[key] = value |
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elif type is bool_or: |
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self.values[key] = self.values.get(key, False) | value |
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return self |
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def subs(self, aliases): |
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if aliases is None: |
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return self |
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resolved = DistutilsInfo() |
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for key, value in self.values.items(): |
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type = distutils_settings[key] |
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if type in [list, transitive_list]: |
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new_value_list = [] |
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for v in value: |
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if v in aliases: |
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v = aliases[v] |
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if isinstance(v, list): |
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new_value_list += v |
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else: |
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new_value_list.append(v) |
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value = new_value_list |
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else: |
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if value in aliases: |
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value = aliases[value] |
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resolved.values[key] = value |
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return resolved |
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def apply(self, extension): |
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for key, value in self.values.items(): |
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type = distutils_settings[key] |
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if type in [list, transitive_list]: |
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value = getattr(extension, key) + list(value) |
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setattr(extension, key, value) |
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_FIND_TOKEN = cython.declare(object, re.compile(r""" |
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(?P<comment> [#] ) | |
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(?P<brace> [{}] ) | |
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(?P<fstring> f )? (?P<quote> '+ | "+ ) |
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""", re.VERBOSE).search) |
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_FIND_STRING_TOKEN = cython.declare(object, re.compile(r""" |
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(?P<escape> [\\]+ ) (?P<escaped_quote> ['"] ) | |
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(?P<fstring> f )? (?P<quote> '+ | "+ ) |
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""", re.VERBOSE).search) |
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_FIND_FSTRING_TOKEN = cython.declare(object, re.compile(r""" |
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(?P<braces> [{]+ | [}]+ ) | |
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(?P<escape> [\\]+ ) (?P<escaped_quote> ['"] ) | |
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(?P<fstring> f )? (?P<quote> '+ | "+ ) |
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""", re.VERBOSE).search) |
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def strip_string_literals(code: str, prefix: str = '__Pyx_L'): |
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""" |
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Normalizes every string literal to be of the form '__Pyx_Lxxx', |
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returning the normalized code and a mapping of labels to |
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string literals. |
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""" |
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new_code: list = [] |
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literals: dict = {} |
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counter: cython.Py_ssize_t = 0 |
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find_token = _FIND_TOKEN |
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def append_new_label(literal): |
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nonlocal counter |
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counter += 1 |
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label = f"{prefix}{counter}_" |
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literals[label] = literal |
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new_code.append(label) |
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def parse_string(quote_type: str, start: cython.Py_ssize_t, is_fstring: cython.bint) -> cython.Py_ssize_t: |
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charpos: cython.Py_ssize_t = start |
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find_token = _FIND_FSTRING_TOKEN if is_fstring else _FIND_STRING_TOKEN |
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while charpos != -1: |
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token = find_token(code, charpos) |
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if token is None: |
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append_new_label(code[start:]) |
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charpos = -1 |
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break |
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charpos = token.end() |
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if token['escape']: |
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if len(token['escape']) % 2 == 0 and token['escaped_quote'] == quote_type[0]: |
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charpos -= 1 |
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elif is_fstring and token['braces']: |
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if len(token['braces']) % 2 == 0: |
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continue |
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if token['braces'][-1] == '{': |
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if start < charpos-1: |
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append_new_label(code[start : charpos-1]) |
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new_code.append('{') |
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start = charpos = parse_code(charpos, in_fstring=True) |
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elif token['quote'].startswith(quote_type): |
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charpos = token.start('quote') |
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if charpos > start: |
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append_new_label(code[start : charpos]) |
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new_code.append(quote_type) |
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charpos += len(quote_type) |
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break |
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return charpos |
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def parse_code(start: cython.Py_ssize_t, in_fstring: cython.bint = False) -> cython.Py_ssize_t: |
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charpos: cython.Py_ssize_t = start |
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end: cython.Py_ssize_t |
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quote: str |
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|
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while charpos != -1: |
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token = find_token(code, charpos) |
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if token is None: |
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new_code.append(code[start:]) |
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charpos = -1 |
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break |
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charpos = end = token.end() |
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if token['quote']: |
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quote = token['quote'] |
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if len(quote) >= 6: |
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quote = quote[:len(quote) % 6] |
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if quote and len(quote) != 2: |
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if len(quote) > 3: |
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end -= len(quote) - 3 |
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quote = quote[:3] |
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new_code.append(code[start:end]) |
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start = charpos = parse_string(quote, end, is_fstring=token['fstring']) |
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|
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elif token['comment']: |
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new_code.append(code[start:end]) |
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charpos = code.find('\n', end) |
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append_new_label(code[end : charpos if charpos != -1 else None]) |
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if charpos == -1: |
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break |
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start = charpos |
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|
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elif in_fstring and token['brace']: |
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if token['brace'] == '}': |
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charpos = end = token.start() + 1 |
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new_code.append(code[start:end]) |
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break |
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else: |
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end = token.start() + 1 |
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new_code.append(code[start:end]) |
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start = charpos = parse_code(end, in_fstring=True) |
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return charpos |
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parse_code(0) |
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return "".join(new_code), literals |
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dependency_regex = re.compile( |
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r"(?:^ [ \t\f]* from [ \t\f]+ cython\.cimports\.([\w.]+) [ \t\f]+ c?import ) |" |
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r"(?:^ [ \t\f]* from [ \t\f]+ ([\w.]+) [ \t\f]+ cimport ) |" |
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r"(?:^ [ \t\f]* c?import [ \t\f]+ cython\.cimports\.([\w.]+) ) |" |
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r"(?:^ [ \t\f]* cimport [ \t\f]+ ([\w.]+ (?:[ \t\f]* , [ \t\f]* [\w.]+)*) ) |" |
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r"(?:^ [ \t\f]* cdef [ \t\f]+ extern [ \t\f]+ from [ \t\f]+ ['\"] ([^'\"]+) ['\"] ) |" |
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r"(?:^ [ \t\f]* include [ \t\f]+ ['\"] ([^'\"]+) ['\"] )", |
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re.MULTILINE | re.VERBOSE) |
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|
dependency_after_from_regex = re.compile( |
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r"(?:^ [ \t\f]+ \( ([\w., \t\f]*) \) [ \t\f]* [#\n]) |" |
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|
r"(?:^ [ \t\f]+ ([\w., \t\f]*) [ \t\f]* [#\n])", |
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re.MULTILINE | re.VERBOSE) |
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|
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def normalize_existing(base_path, rel_paths): |
|
|
return normalize_existing0(os.path.dirname(base_path), tuple(set(rel_paths))) |
|
|
|
|
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|
|
|
@cached_function |
|
|
def normalize_existing0(base_dir, rel_paths): |
|
|
""" |
|
|
Given some base directory ``base_dir`` and a list of path names |
|
|
``rel_paths``, normalize each relative path name ``rel`` by |
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replacing it by ``os.path.join(base, rel)`` if that file exists. |
|
|
|
|
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Return a couple ``(normalized, needed_base)`` where ``normalized`` |
|
|
if the list of normalized file names and ``needed_base`` is |
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|
``base_dir`` if we actually needed ``base_dir``. If no paths were |
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|
changed (for example, if all paths were already absolute), then |
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|
``needed_base`` is ``None``. |
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|
""" |
|
|
normalized = [] |
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|
needed_base = None |
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|
for rel in rel_paths: |
|
|
if os.path.isabs(rel): |
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|
normalized.append(rel) |
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|
continue |
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|
path = join_path(base_dir, rel) |
|
|
if path_exists(path): |
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|
normalized.append(os.path.normpath(path)) |
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|
needed_base = base_dir |
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|
else: |
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|
normalized.append(rel) |
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return (normalized, needed_base) |
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|
|
|
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|
|
|
def resolve_depends(depends, include_dirs): |
|
|
include_dirs = tuple(include_dirs) |
|
|
resolved = [] |
|
|
for depend in depends: |
|
|
path = resolve_depend(depend, include_dirs) |
|
|
if path is not None: |
|
|
resolved.append(path) |
|
|
return resolved |
|
|
|
|
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|
|
|
@cached_function |
|
|
def resolve_depend(depend, include_dirs): |
|
|
if depend[0] == '<' and depend[-1] == '>': |
|
|
return None |
|
|
for dir in include_dirs: |
|
|
path = join_path(dir, depend) |
|
|
if path_exists(path): |
|
|
return os.path.normpath(path) |
|
|
return None |
|
|
|
|
|
|
|
|
@cached_function |
|
|
def package(filename): |
|
|
dir = os.path.dirname(os.path.abspath(str(filename))) |
|
|
if dir != filename and is_package_dir(dir): |
|
|
return package(dir) + (os.path.basename(dir),) |
|
|
else: |
|
|
return () |
|
|
|
|
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|
|
|
@cached_function |
|
|
def fully_qualified_name(filename): |
|
|
module = os.path.splitext(os.path.basename(filename))[0] |
|
|
return '.'.join(package(filename) + (module,)) |
|
|
|
|
|
|
|
|
@cached_function |
|
|
def parse_dependencies(source_filename): |
|
|
|
|
|
|
|
|
|
|
|
with Utils.open_source_file(source_filename, error_handling='ignore') as fh: |
|
|
source = fh.read() |
|
|
distutils_info = DistutilsInfo(source) |
|
|
source, literals = strip_string_literals(source) |
|
|
source = source.replace('\\\n', ' ').replace('\t', ' ') |
|
|
|
|
|
|
|
|
cimports = [] |
|
|
includes = [] |
|
|
externs = [] |
|
|
for m in dependency_regex.finditer(source): |
|
|
pycimports_from, cimport_from, pycimports_list, cimport_list, extern, include = m.groups() |
|
|
if pycimports_from: |
|
|
cimport_from = pycimports_from |
|
|
if pycimports_list: |
|
|
cimport_list = pycimports_list |
|
|
|
|
|
if cimport_from: |
|
|
cimports.append(cimport_from) |
|
|
m_after_from = dependency_after_from_regex.search(source, pos=m.end()) |
|
|
if m_after_from: |
|
|
multiline, one_line = m_after_from.groups() |
|
|
subimports = multiline or one_line |
|
|
cimports.extend("{}.{}".format(cimport_from, s.strip()) |
|
|
for s in subimports.split(',')) |
|
|
|
|
|
elif cimport_list: |
|
|
cimports.extend(x.strip() for x in cimport_list.split(",")) |
|
|
elif extern: |
|
|
externs.append(literals[extern]) |
|
|
else: |
|
|
includes.append(literals[include]) |
|
|
return cimports, includes, externs, distutils_info |
|
|
|
|
|
|
|
|
class DependencyTree: |
|
|
|
|
|
def __init__(self, context, quiet=False): |
|
|
self.context = context |
|
|
self.quiet = quiet |
|
|
self._transitive_cache = {} |
|
|
|
|
|
def parse_dependencies(self, source_filename): |
|
|
if path_exists(source_filename): |
|
|
source_filename = os.path.normpath(source_filename) |
|
|
return parse_dependencies(source_filename) |
|
|
|
|
|
@cached_method |
|
|
def included_files(self, filename): |
|
|
|
|
|
|
|
|
all = set() |
|
|
for include in self.parse_dependencies(filename)[1]: |
|
|
include_path = join_path(os.path.dirname(filename), include) |
|
|
if not path_exists(include_path): |
|
|
include_path = self.context.find_include_file(include, source_file_path=filename) |
|
|
if include_path: |
|
|
if '.' + os.path.sep in include_path: |
|
|
include_path = os.path.normpath(include_path) |
|
|
all.add(include_path) |
|
|
all.update(self.included_files(include_path)) |
|
|
elif not self.quiet: |
|
|
print("Unable to locate '%s' referenced from '%s'" % (filename, include)) |
|
|
return all |
|
|
|
|
|
@cached_method |
|
|
def cimports_externs_incdirs(self, filename): |
|
|
|
|
|
|
|
|
cimports, includes, externs = self.parse_dependencies(filename)[:3] |
|
|
cimports = set(cimports) |
|
|
externs = set(externs) |
|
|
incdirs = set() |
|
|
for include in self.included_files(filename): |
|
|
included_cimports, included_externs, included_incdirs = self.cimports_externs_incdirs(include) |
|
|
cimports.update(included_cimports) |
|
|
externs.update(included_externs) |
|
|
incdirs.update(included_incdirs) |
|
|
externs, incdir = normalize_existing(filename, externs) |
|
|
if incdir: |
|
|
incdirs.add(incdir) |
|
|
return tuple(cimports), externs, incdirs |
|
|
|
|
|
def cimports(self, filename): |
|
|
return self.cimports_externs_incdirs(filename)[0] |
|
|
|
|
|
def package(self, filename): |
|
|
return package(filename) |
|
|
|
|
|
def fully_qualified_name(self, filename): |
|
|
return fully_qualified_name(filename) |
|
|
|
|
|
@cached_method |
|
|
def find_pxd(self, module, filename=None): |
|
|
is_relative = module[0] == '.' |
|
|
if is_relative and not filename: |
|
|
raise NotImplementedError("New relative imports.") |
|
|
if filename is not None: |
|
|
module_path = module.split('.') |
|
|
if is_relative: |
|
|
module_path.pop(0) |
|
|
package_path = list(self.package(filename)) |
|
|
while module_path and not module_path[0]: |
|
|
try: |
|
|
package_path.pop() |
|
|
except IndexError: |
|
|
return None |
|
|
module_path.pop(0) |
|
|
relative = '.'.join(package_path + module_path) |
|
|
pxd = self.context.find_pxd_file(relative, source_file_path=filename) |
|
|
if pxd: |
|
|
return pxd |
|
|
if is_relative: |
|
|
return None |
|
|
return self.context.find_pxd_file(module, source_file_path=filename) |
|
|
|
|
|
@cached_method |
|
|
def cimported_files(self, filename): |
|
|
filename_root, filename_ext = os.path.splitext(filename) |
|
|
if filename_ext in ('.pyx', '.py') and path_exists(filename_root + '.pxd'): |
|
|
pxd_list = [filename_root + '.pxd'] |
|
|
else: |
|
|
pxd_list = [] |
|
|
|
|
|
|
|
|
for module in self.cimports(filename): |
|
|
if module[:7] == 'cython.' or module == 'cython': |
|
|
continue |
|
|
pxd_file = self.find_pxd(module, filename) |
|
|
if pxd_file is not None: |
|
|
pxd_list.append(pxd_file) |
|
|
return tuple(pxd_list) |
|
|
|
|
|
@cached_method |
|
|
def immediate_dependencies(self, filename): |
|
|
all_deps = {filename} |
|
|
all_deps.update(self.cimported_files(filename)) |
|
|
all_deps.update(self.included_files(filename)) |
|
|
return all_deps |
|
|
|
|
|
def all_dependencies(self, filename): |
|
|
return self.transitive_merge(filename, self.immediate_dependencies, set.union) |
|
|
|
|
|
@cached_method |
|
|
def timestamp(self, filename): |
|
|
return os.path.getmtime(filename) |
|
|
|
|
|
def extract_timestamp(self, filename): |
|
|
return self.timestamp(filename), filename |
|
|
|
|
|
def newest_dependency(self, filename): |
|
|
return max([self.extract_timestamp(f) for f in self.all_dependencies(filename)]) |
|
|
|
|
|
def distutils_info0(self, filename): |
|
|
info = self.parse_dependencies(filename)[3] |
|
|
kwds = info.values |
|
|
cimports, externs, incdirs = self.cimports_externs_incdirs(filename) |
|
|
basedir = os.getcwd() |
|
|
|
|
|
if externs: |
|
|
externs = _make_relative(externs, basedir) |
|
|
if 'depends' in kwds: |
|
|
kwds['depends'] = list(set(kwds['depends']).union(externs)) |
|
|
else: |
|
|
kwds['depends'] = list(externs) |
|
|
|
|
|
|
|
|
if incdirs: |
|
|
include_dirs = list(kwds.get('include_dirs', [])) |
|
|
for inc in _make_relative(incdirs, basedir): |
|
|
if inc not in include_dirs: |
|
|
include_dirs.append(inc) |
|
|
kwds['include_dirs'] = include_dirs |
|
|
return info |
|
|
|
|
|
def distutils_info(self, filename, aliases=None, base=None): |
|
|
return (self.transitive_merge(filename, self.distutils_info0, DistutilsInfo.merge) |
|
|
.subs(aliases) |
|
|
.merge(base)) |
|
|
|
|
|
def transitive_merge(self, node, extract, merge): |
|
|
try: |
|
|
seen = self._transitive_cache[extract, merge] |
|
|
except KeyError: |
|
|
seen = self._transitive_cache[extract, merge] = {} |
|
|
return self.transitive_merge_helper( |
|
|
node, extract, merge, seen, {}, self.cimported_files)[0] |
|
|
|
|
|
def transitive_merge_helper(self, node, extract, merge, seen, stack, outgoing): |
|
|
if node in seen: |
|
|
return seen[node], None |
|
|
deps = extract(node) |
|
|
if node in stack: |
|
|
return deps, node |
|
|
try: |
|
|
stack[node] = len(stack) |
|
|
loop = None |
|
|
for next in outgoing(node): |
|
|
sub_deps, sub_loop = self.transitive_merge_helper(next, extract, merge, seen, stack, outgoing) |
|
|
if sub_loop is not None: |
|
|
if loop is not None and stack[loop] < stack[sub_loop]: |
|
|
pass |
|
|
else: |
|
|
loop = sub_loop |
|
|
deps = merge(deps, sub_deps) |
|
|
if loop == node: |
|
|
loop = None |
|
|
if loop is None: |
|
|
seen[node] = deps |
|
|
return deps, loop |
|
|
finally: |
|
|
del stack[node] |
|
|
|
|
|
|
|
|
_dep_tree = None |
|
|
|
|
|
def create_dependency_tree(ctx=None, quiet=False): |
|
|
global _dep_tree |
|
|
if _dep_tree is None: |
|
|
if ctx is None: |
|
|
ctx = Context(["."], get_directive_defaults(), |
|
|
options=CompilationOptions(default_options)) |
|
|
_dep_tree = DependencyTree(ctx, quiet=quiet) |
|
|
return _dep_tree |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
def default_create_extension(template, kwds): |
|
|
if 'depends' in kwds: |
|
|
include_dirs = kwds.get('include_dirs', []) + ["."] |
|
|
depends = resolve_depends(kwds['depends'], include_dirs) |
|
|
kwds['depends'] = sorted(set(depends + template.depends)) |
|
|
|
|
|
t = template.__class__ |
|
|
ext = t(**kwds) |
|
|
if hasattr(template, "py_limited_api"): |
|
|
ext.py_limited_api = template.py_limited_api |
|
|
metadata = dict(distutils=kwds, module_name=kwds['name']) |
|
|
return (ext, metadata) |
|
|
|
|
|
|
|
|
|
|
|
def create_extension_list(patterns, exclude=None, ctx=None, aliases=None, quiet=False, language=None, |
|
|
exclude_failures=False): |
|
|
if language is not None: |
|
|
print('Warning: passing language={0!r} to cythonize() is deprecated. ' |
|
|
'Instead, put "# distutils: language={0}" in your .pyx or .pxd file(s)'.format(language)) |
|
|
if exclude is None: |
|
|
exclude = [] |
|
|
if patterns is None: |
|
|
return [], {} |
|
|
elif isinstance(patterns, str) or not isinstance(patterns, Iterable): |
|
|
patterns = [patterns] |
|
|
|
|
|
from distutils.extension import Extension |
|
|
if 'setuptools' in sys.modules: |
|
|
|
|
|
extension_classes = ( |
|
|
Extension, |
|
|
sys.modules['setuptools.extension']._Extension, |
|
|
sys.modules['setuptools'].Extension, |
|
|
) |
|
|
else: |
|
|
extension_classes = (Extension,) |
|
|
|
|
|
explicit_modules = {m.name for m in patterns if isinstance(m, extension_classes)} |
|
|
deps = create_dependency_tree(ctx, quiet=quiet) |
|
|
shared_utility_qualified_name = ctx.shared_utility_qualified_name |
|
|
|
|
|
to_exclude = set() |
|
|
if not isinstance(exclude, list): |
|
|
exclude = [exclude] |
|
|
for pattern in exclude: |
|
|
to_exclude.update(map(os.path.abspath, extended_iglob(pattern))) |
|
|
|
|
|
module_list = [] |
|
|
module_metadata = {} |
|
|
|
|
|
|
|
|
|
|
|
create_extension = ctx.options.create_extension or default_create_extension |
|
|
|
|
|
seen = set() |
|
|
for pattern in patterns: |
|
|
if isinstance(pattern, str): |
|
|
filepattern = pattern |
|
|
template = Extension(pattern, []) |
|
|
name = '*' |
|
|
base = None |
|
|
ext_language = language |
|
|
elif isinstance(pattern, extension_classes): |
|
|
cython_sources = [s for s in pattern.sources |
|
|
if os.path.splitext(s)[1] in ('.py', '.pyx')] |
|
|
if cython_sources: |
|
|
filepattern = cython_sources[0] |
|
|
if len(cython_sources) > 1: |
|
|
print("Warning: Multiple cython sources found for extension '%s': %s\n" |
|
|
"See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html " |
|
|
"for sharing declarations among Cython files." % (pattern.name, cython_sources)) |
|
|
elif shared_utility_qualified_name and pattern.name == shared_utility_qualified_name: |
|
|
|
|
|
m, _ = create_extension(pattern, dict( |
|
|
name=shared_utility_qualified_name, |
|
|
sources=pattern.sources or [ |
|
|
shared_utility_qualified_name.replace('.', os.sep) + ('.cpp' if pattern.language == 'c++' else '.c')], |
|
|
language=pattern.language, |
|
|
)) |
|
|
m.np_pythran = False |
|
|
m.shared_utility_qualified_name = None |
|
|
module_list.append(m) |
|
|
continue |
|
|
else: |
|
|
|
|
|
module_list.append(pattern) |
|
|
continue |
|
|
template = pattern |
|
|
name = template.name |
|
|
base = DistutilsInfo(exn=template) |
|
|
ext_language = None |
|
|
else: |
|
|
msg = str("pattern is not of type str nor subclass of Extension (%s)" |
|
|
" but of type %s and class %s" % (repr(Extension), |
|
|
type(pattern), |
|
|
pattern.__class__)) |
|
|
raise TypeError(msg) |
|
|
|
|
|
for file in nonempty(sorted(extended_iglob(filepattern)), "'%s' doesn't match any files" % filepattern): |
|
|
if os.path.abspath(file) in to_exclude: |
|
|
continue |
|
|
module_name = deps.fully_qualified_name(file) |
|
|
if '*' in name: |
|
|
if module_name in explicit_modules: |
|
|
continue |
|
|
elif name: |
|
|
module_name = name |
|
|
|
|
|
Utils.raise_error_if_module_name_forbidden(module_name) |
|
|
|
|
|
if module_name not in seen: |
|
|
try: |
|
|
kwds = deps.distutils_info(file, aliases, base).values |
|
|
except Exception: |
|
|
if exclude_failures: |
|
|
continue |
|
|
raise |
|
|
if base is not None: |
|
|
for key, value in base.values.items(): |
|
|
if key not in kwds: |
|
|
kwds[key] = value |
|
|
|
|
|
kwds['name'] = module_name |
|
|
|
|
|
sources = [file] + [m for m in template.sources if m != filepattern] |
|
|
if 'sources' in kwds: |
|
|
|
|
|
for source in kwds['sources']: |
|
|
if source not in sources: |
|
|
sources.append(source) |
|
|
kwds['sources'] = sources |
|
|
|
|
|
if ext_language and 'language' not in kwds: |
|
|
kwds['language'] = ext_language |
|
|
|
|
|
np_pythran = kwds.pop('np_pythran', False) |
|
|
|
|
|
|
|
|
m, metadata = create_extension(template, kwds) |
|
|
m.np_pythran = np_pythran or getattr(m, 'np_pythran', False) |
|
|
m.shared_utility_qualified_name = shared_utility_qualified_name |
|
|
if m.np_pythran: |
|
|
update_pythran_extension(m) |
|
|
module_list.append(m) |
|
|
|
|
|
|
|
|
|
|
|
module_metadata[module_name] = metadata |
|
|
|
|
|
if file not in m.sources: |
|
|
|
|
|
target_file = os.path.splitext(file)[0] + ('.cpp' if m.language == 'c++' else '.c') |
|
|
try: |
|
|
m.sources.remove(target_file) |
|
|
except ValueError: |
|
|
|
|
|
print("Warning: Cython source file not found in sources list, adding %s" % file) |
|
|
m.sources.insert(0, file) |
|
|
seen.add(name) |
|
|
return module_list, module_metadata |
|
|
|
|
|
|
|
|
|
|
|
def cythonize(module_list, exclude=None, nthreads=0, aliases=None, quiet=False, force=None, language=None, |
|
|
exclude_failures=False, show_all_warnings=False, **options): |
|
|
""" |
|
|
Compile a set of source modules into C/C++ files and return a list of distutils |
|
|
Extension objects for them. |
|
|
|
|
|
:param module_list: As module list, pass either a glob pattern, a list of glob |
|
|
patterns or a list of Extension objects. The latter |
|
|
allows you to configure the extensions separately |
|
|
through the normal distutils options. |
|
|
You can also pass Extension objects that have |
|
|
glob patterns as their sources. Then, cythonize |
|
|
will resolve the pattern and create a |
|
|
copy of the Extension for every matching file. |
|
|
|
|
|
:param exclude: When passing glob patterns as ``module_list``, you can exclude certain |
|
|
module names explicitly by passing them into the ``exclude`` option. |
|
|
|
|
|
:param nthreads: The number of concurrent builds for parallel compilation |
|
|
(requires the ``multiprocessing`` module). |
|
|
|
|
|
:param aliases: If you want to use compiler directives like ``# distutils: ...`` but |
|
|
can only know at compile time (when running the ``setup.py``) which values |
|
|
to use, you can use aliases and pass a dictionary mapping those aliases |
|
|
to Python strings when calling :func:`cythonize`. As an example, say you |
|
|
want to use the compiler |
|
|
directive ``# distutils: include_dirs = ../static_libs/include/`` |
|
|
but this path isn't always fixed and you want to find it when running |
|
|
the ``setup.py``. You can then do ``# distutils: include_dirs = MY_HEADERS``, |
|
|
find the value of ``MY_HEADERS`` in the ``setup.py``, put it in a python |
|
|
variable called ``foo`` as a string, and then call |
|
|
``cythonize(..., aliases={'MY_HEADERS': foo})``. |
|
|
|
|
|
:param quiet: If True, Cython won't print error, warning, or status messages during the |
|
|
compilation. |
|
|
|
|
|
:param force: Forces the recompilation of the Cython modules, even if the timestamps |
|
|
don't indicate that a recompilation is necessary. |
|
|
|
|
|
:param language: To globally enable C++ mode, you can pass ``language='c++'``. Otherwise, this |
|
|
will be determined at a per-file level based on compiler directives. This |
|
|
affects only modules found based on file names. Extension instances passed |
|
|
into :func:`cythonize` will not be changed. It is recommended to rather |
|
|
use the compiler directive ``# distutils: language = c++`` than this option. |
|
|
|
|
|
:param exclude_failures: For a broad 'try to compile' mode that ignores compilation |
|
|
failures and simply excludes the failed extensions, |
|
|
pass ``exclude_failures=True``. Note that this only |
|
|
really makes sense for compiling ``.py`` files which can also |
|
|
be used without compilation. |
|
|
|
|
|
:param show_all_warnings: By default, not all Cython warnings are printed. |
|
|
Set to true to show all warnings. |
|
|
|
|
|
:param annotate: If ``True``, will produce a HTML file for each of the ``.pyx`` or ``.py`` |
|
|
files compiled. The HTML file gives an indication |
|
|
of how much Python interaction there is in |
|
|
each of the source code lines, compared to plain C code. |
|
|
It also allows you to see the C/C++ code |
|
|
generated for each line of Cython code. This report is invaluable when |
|
|
optimizing a function for speed, |
|
|
and for determining when to :ref:`release the GIL <nogil>`: |
|
|
in general, a ``nogil`` block may contain only "white" code. |
|
|
See examples in :ref:`determining_where_to_add_types` or |
|
|
:ref:`primes`. |
|
|
|
|
|
|
|
|
:param annotate-fullc: If ``True`` will produce a colorized HTML version of |
|
|
the source which includes entire generated C/C++-code. |
|
|
|
|
|
|
|
|
:param compiler_directives: Allow to set compiler directives in the ``setup.py`` like this: |
|
|
``compiler_directives={'embedsignature': True}``. |
|
|
See :ref:`compiler-directives`. |
|
|
|
|
|
:param depfile: produce depfiles for the sources if True. |
|
|
:param cache: If ``True`` the cache enabled with default path. If the value is a path to a directory, |
|
|
then the directory is used to cache generated ``.c``/``.cpp`` files. By default cache is disabled. |
|
|
See :ref:`cython-cache`. |
|
|
""" |
|
|
if exclude is None: |
|
|
exclude = [] |
|
|
if 'include_path' not in options: |
|
|
options['include_path'] = ['.'] |
|
|
if 'common_utility_include_dir' in options: |
|
|
safe_makedirs(options['common_utility_include_dir']) |
|
|
|
|
|
depfile = options.pop('depfile', None) |
|
|
|
|
|
if pythran is None: |
|
|
pythran_options = None |
|
|
else: |
|
|
pythran_options = CompilationOptions(**options) |
|
|
pythran_options.cplus = True |
|
|
pythran_options.np_pythran = True |
|
|
|
|
|
if force is None: |
|
|
force = os.environ.get("CYTHON_FORCE_REGEN") == "1" |
|
|
|
|
|
c_options = CompilationOptions(**options) |
|
|
cpp_options = CompilationOptions(**options); cpp_options.cplus = True |
|
|
ctx = Context.from_options(c_options) |
|
|
options = c_options |
|
|
shared_utility_qualified_name = ctx.shared_utility_qualified_name |
|
|
module_list, module_metadata = create_extension_list( |
|
|
module_list, |
|
|
exclude=exclude, |
|
|
ctx=ctx, |
|
|
quiet=quiet, |
|
|
exclude_failures=exclude_failures, |
|
|
language=language, |
|
|
aliases=aliases) |
|
|
|
|
|
fix_windows_unicode_modules(module_list) |
|
|
|
|
|
deps = create_dependency_tree(ctx, quiet=quiet) |
|
|
build_dir = getattr(options, 'build_dir', None) |
|
|
if options.cache and not (options.annotate or Options.annotate): |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
cache_path = None if options.cache is True else options.cache |
|
|
cache = Cache(cache_path, getattr(options, 'cache_size', None)) |
|
|
else: |
|
|
cache = None |
|
|
|
|
|
def copy_to_build_dir(filepath, root=os.getcwd()): |
|
|
filepath_abs = os.path.abspath(filepath) |
|
|
if os.path.isabs(filepath): |
|
|
filepath = filepath_abs |
|
|
if filepath_abs.startswith(root): |
|
|
|
|
|
mod_dir = join_path(build_dir, |
|
|
os.path.dirname(_relpath(filepath, root))) |
|
|
copy_once_if_newer(filepath_abs, mod_dir) |
|
|
|
|
|
def file_in_build_dir(c_file): |
|
|
if not build_dir: |
|
|
return c_file |
|
|
if os.path.isabs(c_file): |
|
|
c_file = os.path.splitdrive(c_file)[1] |
|
|
c_file = c_file.split(os.sep, 1)[1] |
|
|
c_file = os.path.join(build_dir, c_file) |
|
|
dir = os.path.dirname(c_file) |
|
|
safe_makedirs_once(dir) |
|
|
return c_file |
|
|
|
|
|
modules_by_cfile = collections.defaultdict(list) |
|
|
to_compile = [] |
|
|
for m in module_list: |
|
|
if build_dir: |
|
|
for dep in m.depends: |
|
|
copy_to_build_dir(dep) |
|
|
|
|
|
cy_sources = [ |
|
|
source for source in m.sources |
|
|
if os.path.splitext(source)[1] in ('.pyx', '.py')] |
|
|
if len(cy_sources) == 1: |
|
|
|
|
|
full_module_name = m.name |
|
|
else: |
|
|
|
|
|
full_module_name = None |
|
|
|
|
|
np_pythran = getattr(m, 'np_pythran', False) |
|
|
py_limited_api = getattr(m, 'py_limited_api', False) |
|
|
|
|
|
if np_pythran: |
|
|
options = pythran_options |
|
|
elif m.language == 'c++': |
|
|
options = cpp_options |
|
|
else: |
|
|
options = c_options |
|
|
|
|
|
new_sources = [] |
|
|
for source in m.sources: |
|
|
base, ext = os.path.splitext(source) |
|
|
if ext in ('.pyx', '.py'): |
|
|
c_file = base + ('.cpp' if m.language == 'c++' or np_pythran else '.c') |
|
|
|
|
|
|
|
|
c_file = file_in_build_dir(c_file) |
|
|
|
|
|
|
|
|
if depfile: |
|
|
dependencies = deps.all_dependencies(source) |
|
|
write_depfile(c_file, source, dependencies) |
|
|
|
|
|
|
|
|
if Utils.file_generated_by_this_cython(c_file): |
|
|
c_timestamp = os.path.getmtime(c_file) |
|
|
else: |
|
|
c_timestamp = -1 |
|
|
|
|
|
|
|
|
|
|
|
if c_timestamp < deps.timestamp(source): |
|
|
dep_timestamp, dep = deps.timestamp(source), source |
|
|
priority = 0 |
|
|
else: |
|
|
dep_timestamp, dep = deps.newest_dependency(source) |
|
|
priority = 2 - (dep in deps.immediate_dependencies(source)) |
|
|
if force or c_timestamp < dep_timestamp: |
|
|
if not quiet and not force: |
|
|
if source == dep: |
|
|
print("Compiling %s because it changed." % Utils.decode_filename(source)) |
|
|
else: |
|
|
print("Compiling %s because it depends on %s." % ( |
|
|
Utils.decode_filename(source), |
|
|
Utils.decode_filename(dep), |
|
|
)) |
|
|
if not force and cache: |
|
|
fingerprint = cache.transitive_fingerprint( |
|
|
source, deps.all_dependencies(source), options, |
|
|
FingerprintFlags(m.language or 'c', py_limited_api, np_pythran) |
|
|
) |
|
|
else: |
|
|
fingerprint = None |
|
|
to_compile.append(( |
|
|
priority, source, c_file, fingerprint, quiet, |
|
|
options, not exclude_failures, module_metadata.get(m.name), |
|
|
full_module_name, show_all_warnings)) |
|
|
modules_by_cfile[c_file].append(m) |
|
|
elif shared_utility_qualified_name and m.name == shared_utility_qualified_name: |
|
|
|
|
|
c_file = file_in_build_dir(source) |
|
|
module_options = CompilationOptions( |
|
|
options, shared_c_file_path=c_file, shared_utility_qualified_name=None) |
|
|
if not Utils.is_cython_generated_file(c_file): |
|
|
print(f"Warning: Shared module source file is not a Cython file - not creating '{m.name}' as '{c_file}'") |
|
|
elif force or not Utils.file_generated_by_this_cython(c_file): |
|
|
from .SharedModule import generate_shared_module |
|
|
if not quiet: |
|
|
print(f"Generating shared module '{m.name}'") |
|
|
generate_shared_module(module_options) |
|
|
else: |
|
|
c_file = source |
|
|
if build_dir: |
|
|
copy_to_build_dir(source) |
|
|
|
|
|
new_sources.append(c_file) |
|
|
|
|
|
m.sources = new_sources |
|
|
|
|
|
to_compile.sort() |
|
|
N = len(to_compile) |
|
|
|
|
|
|
|
|
|
|
|
build_progress_indicator = ("[{0:%d}/%d] " % (len(str(N)), N)).format |
|
|
to_compile = [ |
|
|
task[1:] + (build_progress_indicator(i), cache) |
|
|
for i, task in enumerate(to_compile, 1) |
|
|
] |
|
|
|
|
|
if N <= 1: |
|
|
nthreads = 0 |
|
|
try: |
|
|
from concurrent.futures import ProcessPoolExecutor |
|
|
except ImportError: |
|
|
nthreads = 0 |
|
|
|
|
|
if nthreads: |
|
|
with ProcessPoolExecutor( |
|
|
max_workers=nthreads, |
|
|
initializer=_init_multiprocessing_helper, |
|
|
) as proc_pool: |
|
|
try: |
|
|
list(proc_pool.map(cythonize_one_helper, to_compile, chunksize=1)) |
|
|
except KeyboardInterrupt: |
|
|
proc_pool.terminate_workers() |
|
|
proc_pool.shutdown(cancel_futures=True) |
|
|
raise |
|
|
else: |
|
|
for args in to_compile: |
|
|
cythonize_one(*args) |
|
|
|
|
|
if exclude_failures: |
|
|
failed_modules = set() |
|
|
for c_file, modules in modules_by_cfile.items(): |
|
|
if not os.path.exists(c_file): |
|
|
failed_modules.update(modules) |
|
|
elif os.path.getsize(c_file) < 200: |
|
|
f = open(c_file, 'r', encoding='iso8859-1') |
|
|
try: |
|
|
if f.read(len('#error ')) == '#error ': |
|
|
|
|
|
failed_modules.update(modules) |
|
|
finally: |
|
|
f.close() |
|
|
if failed_modules: |
|
|
for module in failed_modules: |
|
|
module_list.remove(module) |
|
|
print("Failed compilations: %s" % ', '.join(sorted([ |
|
|
module.name for module in failed_modules]))) |
|
|
|
|
|
if cache: |
|
|
cache.cleanup_cache() |
|
|
|
|
|
|
|
|
|
|
|
sys.stdout.flush() |
|
|
return module_list |
|
|
|
|
|
|
|
|
def fix_windows_unicode_modules(module_list): |
|
|
|
|
|
|
|
|
if sys.platform != "win32": |
|
|
return |
|
|
if sys.version_info >= (3, 8, 2): |
|
|
return |
|
|
|
|
|
def make_filtered_list(ignored_symbol, old_entries): |
|
|
class FilteredExportSymbols(list): |
|
|
|
|
|
|
|
|
|
|
|
def __contains__(self, val): |
|
|
|
|
|
return val == ignored_symbol or list.__contains__(self, val) |
|
|
|
|
|
filtered_list = FilteredExportSymbols(old_entries) |
|
|
if old_entries: |
|
|
filtered_list.extend(name for name in old_entries if name != ignored_symbol) |
|
|
return filtered_list |
|
|
|
|
|
for m in module_list: |
|
|
if m.name.isascii(): |
|
|
continue |
|
|
m.export_symbols = make_filtered_list( |
|
|
"PyInit_" + m.name.rsplit(".", 1)[-1], |
|
|
m.export_symbols, |
|
|
) |
|
|
|
|
|
|
|
|
if os.environ.get('XML_RESULTS'): |
|
|
compile_result_dir = os.environ['XML_RESULTS'] |
|
|
def record_results(func): |
|
|
def with_record(*args): |
|
|
t = time.time() |
|
|
success = True |
|
|
try: |
|
|
try: |
|
|
func(*args) |
|
|
except: |
|
|
success = False |
|
|
finally: |
|
|
t = time.time() - t |
|
|
module = fully_qualified_name(args[0]) |
|
|
name = "cythonize." + module |
|
|
failures = 1 - success |
|
|
if success: |
|
|
failure_item = "" |
|
|
else: |
|
|
failure_item = "failure" |
|
|
output = open(os.path.join(compile_result_dir, name + ".xml"), "w") |
|
|
output.write(""" |
|
|
<?xml version="1.0" ?> |
|
|
<testsuite name="%(name)s" errors="0" failures="%(failures)s" tests="1" time="%(t)s"> |
|
|
<testcase classname="%(name)s" name="cythonize"> |
|
|
%(failure_item)s |
|
|
</testcase> |
|
|
</testsuite> |
|
|
""".strip() % locals()) |
|
|
output.close() |
|
|
return with_record |
|
|
else: |
|
|
def record_results(func): |
|
|
return func |
|
|
|
|
|
|
|
|
|
|
|
@record_results |
|
|
def cythonize_one(pyx_file, c_file, |
|
|
fingerprint=None, quiet=False, options=None, |
|
|
raise_on_failure=True, embedded_metadata=None, |
|
|
full_module_name=None, show_all_warnings=False, |
|
|
progress="", cache=None): |
|
|
from ..Compiler.Main import compile_single, default_options |
|
|
from ..Compiler.Errors import CompileError, PyrexError |
|
|
|
|
|
if not quiet: |
|
|
if cache and fingerprint and cache.lookup_cache(c_file, fingerprint): |
|
|
print(f"{progress}Found compiled {pyx_file} in cache") |
|
|
else: |
|
|
print(f"{progress}Cythonizing {Utils.decode_filename(pyx_file)}") |
|
|
if options is None: |
|
|
options = CompilationOptions(default_options) |
|
|
options.output_file = c_file |
|
|
options.embedded_metadata = embedded_metadata |
|
|
|
|
|
old_warning_level = Errors.LEVEL |
|
|
if show_all_warnings: |
|
|
Errors.LEVEL = 0 |
|
|
|
|
|
any_failures = 0 |
|
|
try: |
|
|
result = compile_single(pyx_file, options, full_module_name=full_module_name, cache=cache, fingerprint=fingerprint) |
|
|
if result.num_errors > 0: |
|
|
any_failures = 1 |
|
|
except (OSError, PyrexError) as e: |
|
|
sys.stderr.write('%s\n' % e) |
|
|
any_failures = 1 |
|
|
|
|
|
import traceback |
|
|
traceback.print_exc() |
|
|
except Exception: |
|
|
if raise_on_failure: |
|
|
raise |
|
|
import traceback |
|
|
traceback.print_exc() |
|
|
any_failures = 1 |
|
|
finally: |
|
|
if show_all_warnings: |
|
|
Errors.LEVEL = old_warning_level |
|
|
|
|
|
if any_failures: |
|
|
if raise_on_failure: |
|
|
raise CompileError(None, pyx_file) |
|
|
elif os.path.exists(c_file): |
|
|
os.remove(c_file) |
|
|
|
|
|
|
|
|
def cythonize_one_helper(m): |
|
|
import traceback |
|
|
try: |
|
|
return cythonize_one(*m) |
|
|
except Exception: |
|
|
traceback.print_exc() |
|
|
raise |
|
|
|
|
|
|
|
|
def _init_multiprocessing_helper(): |
|
|
|
|
|
import signal |
|
|
signal.signal(signal.SIGINT, signal.SIG_IGN) |
|
|
|