#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Read downsample experiment results and generate: results/downsample/summary.csv — all metrics by dataset/frac/model results/downsample/curve_.png — AUROC vs training samples, per model facet Plus print a readable table. """ import os, json, csv import matplotlib matplotlib.use("Agg") import matplotlib.pyplot as plt import numpy as np PROJ = "/mnt/tidal-alsh-share2/dataset/qinshengqian/research/c3/GPT-Image" RES = f"{PROJ}/results/downsample" OUT = RES FRACTIONS = [100, 50, 25, 10, 5] MODELS = ["retfound", "resnet", "vit"] MLABEL = {"retfound": "RetFound (ViT-L, CFP)", "resnet": "ResNet-50", "vit": "ViT-B/16"} MCOLOR = {"retfound": "#4C72B0", "resnet": "#55A868", "vit": "#C44E52"} DSETS = ["adam", "airogs", "papila"] DNAME = {"adam": "ADAM (AMD)", "airogs": "AIROGS (Glaucoma)", "papila": "PAPILA (Glaucoma)"} TRAIN_COUNTS = { # stratified train set size per fraction "adam": {100: 280, 50: 140, 25: 70, 10: 28, 5: 14}, "airogs": {100: 5000, 50: 2500, 25: 1250, 10: 500, 5: 250}, "papila": {100: 294, 50: 146, 25: 73, 10: 29, 5: 15}, } def load(dsk, frac, model): p = os.path.join(RES, dsk, f"{frac:03d}", model, "metrics.json") try: return json.load(open(p)) except Exception: return None def main(): rows = [] for dsk in DSETS: for frac in FRACTIONS: for model in MODELS: m = load(dsk, frac, model) n = TRAIN_COUNTS[dsk][frac] if m: au = m.get("auroc") if m.get("task") == "binary" else m.get("auroc_macro_ovr") rows.append({"dataset": dsk, "frac": frac, "n_train": n, "model": model, "acc": m.get("accuracy"), "auroc": au, "f1": m.get("f1_macro"), "kappa": m.get("cohen_kappa"), "mcc": m.get("mcc"), "n_test": m.get("n_test")}) # write CSV os.makedirs(OUT, exist_ok=True) csvp = os.path.join(OUT, "summary.csv") with open(csvp, "w", newline="") as f: w = csv.DictWriter(f, fieldnames=["dataset", "frac", "n_train", "model", "acc", "auroc", "f1", "kappa", "mcc", "n_test"]) w.writeheader(); w.writerows(rows) print(f"wrote {csvp} ({len(rows)} rows)\n") # print table for dsk in DSETS: print(f"\n### {DNAME[dsk]}") print(f"{'Frac':>5} {'n':>5} ", end="") for model in MODELS: print(f" {model[:8]:>8}", end="") print() for frac in FRACTIONS: print(f"{frac:>4}% {TRAIN_COUNTS[dsk][frac]:>5} ", end="") for model in MODELS: m = load(dsk, frac, model) au = m.get("auroc") if m and m.get("task") == "binary" else (m.get("auroc_macro_ovr") if m else None) print(f" {au:>8.4f}" if au else " NaN ", end="") print() # learn curve plots: one facet per model, 3x1 layout for model in MODELS: fig, axes = plt.subplots(1, 3, figsize=(15, 4.5), sharey=True) for i, dsk in enumerate(DSETS): ax = axes[i] xs, ys = [], [] for frac in sorted(FRACTIONS): m = load(dsk, frac, model) n = TRAIN_COUNTS[dsk][frac] au = m.get("auroc") if m and m.get("task") == "binary" else (m.get("auroc_macro_ovr") if m else None) if au is not None: xs.append(n); ys.append(au) if xs: ax.plot(xs, ys, "o-", color=MCOLOR[model], lw=2, markersize=7) # annotate for x, y in zip(xs, ys): ax.text(x, y, f" {y:.3f}", fontsize=8, va="bottom") ax.set_xscale("log") ax.set_xlabel("Training samples (log scale)") ax.set_ylabel("AUROC" if i == 0 else "") ax.set_title(f"{DNAME[dsk]}", fontsize=11, fontweight="bold") ax.grid(True, ls=":", alpha=0.4) ax.set_xticks(sorted([TRAIN_COUNTS[dsk][f] for f in FRACTIONS])) ax.set_xticklabels([str(TRAIN_COUNTS[dsk][f]) for f in FRACTIONS], fontsize=8) ax.set_ylim(0.35, 1.02) fig.suptitle(f"{MLABEL[model]} · Data Scarcity Curve", fontsize=13, fontweight="bold", y=1.02) fig.tight_layout() figp = os.path.join(OUT, f"curve_{model}.png") fig.savefig(figp, dpi=150, bbox_inches="tight") plt.close(fig) print(f" wrote {figp}") # combined: all models on ADAM only (paper-style) fig, ax = plt.subplots(figsize=(6, 4.5)) for model in MODELS: xs, ys = [], [] for frac in sorted(FRACTIONS): m = load("adam", frac, model) au = m.get("auroc") if m and m.get("task") == "binary" else (m.get("auroc_macro_ovr") if m else None) _n = TRAIN_COUNTS["adam"][frac] if au is not None: xs.append(_n); ys.append(au) ax.plot(xs, ys, "o-", label=MLABEL[model], color=MCOLOR[model], lw=2, markersize=7) for x, y in zip(xs, ys): ax.text(x, y, f" {y:.3f}", fontsize=7, va="bottom", color=MCOLOR[model]) ax.set_xscale("log"); ax.set_xlabel("Training samples (log scale)"); ax.set_ylabel("AUROC") ax.set_title("ADAM (AMD) · 3 models", fontweight="bold") ax.set_xticks(sorted([TRAIN_COUNTS["adam"][f] for f in FRACTIONS])) ax.set_xticklabels([str(TRAIN_COUNTS["adam"][f]) for f in FRACTIONS]) ax.set_ylim(0.4, 1.02); ax.legend(fontsize=8); ax.grid(True, ls=":", alpha=0.4) fig.tight_layout() fig.savefig(os.path.join(OUT, "curve_adam_combined.png"), dpi=150, bbox_inches="tight") plt.close(fig) print(" wrote adam combined curve") print(f"\n=== summary csv: {csvp} ===") if __name__ == "__main__": main()