| import sys |
| sys.path.insert(0, "/data/sichengli/Code/PixelGen") |
|
|
| import torch |
| import numpy as np |
| from PIL import Image, ImageDraw, ImageFont |
| import torchvision.transforms as transforms |
| import torchvision.transforms.functional as TF |
| import os, random |
|
|
| from src.models.transformer.JiT_medical import JiTMedical |
| from src.diffusion.flow_matching.sampling_medical import EulerSamplerMedical |
| from src.diffusion.flow_matching.scheduling import LinearScheduler |
| from src.diffusion.base.guidance import simple_guidance_fn |
|
|
| device = torch.device("cuda:0") |
|
|
| |
| ckpt_path = "/data/sichengli/Code/PixelGen/medical_workdirs/exp_PixelGen_Medical_B16/epoch=236-step=100000.ckpt" |
| ckpt = torch.load(ckpt_path, map_location="cpu", weights_only=False) |
| state_dict = ckpt["state_dict"] |
|
|
| model = JiTMedical( |
| input_size=256, patch_size=16, in_channels=3, |
| hidden_size=768, depth=12, num_heads=12, mlp_ratio=4.0, |
| attn_drop=0.0, proj_drop=0.1, num_classes=1, |
| use_bottleneck=True, bottleneck_dim=128, |
| in_context_len=32, in_context_start=4, mask_in_channels=1 |
| ) |
| ema_state = {} |
| for k, v in state_dict.items(): |
| if k.startswith("ema_denoiser."): |
| new_k = k.replace("ema_denoiser.", "").replace("_orig_mod.", "") |
| ema_state[new_k] = v |
| model.load_state_dict(ema_state, strict=False) |
| model = model.to(device).eval().to(torch.float32) |
|
|
| sampler = EulerSamplerMedical( |
| num_steps=50, guidance=2.0, timeshift=1.0, |
| guidance_interval_min=0.1, guidance_interval_max=0.9, |
| scheduler=LinearScheduler(), w_scheduler=LinearScheduler(), |
| guidance_fn=simple_guidance_fn, |
| ).to(device) |
|
|
| |
| data_root = "/data2/sichengli/Data/test/Segmentation/OCTA500" |
| img_dir = os.path.join(data_root, "images") |
| mask_dir = os.path.join(data_root, "masks") |
| all_files = sorted([f for f in os.listdir(img_dir) if f.endswith(".png") and not f.startswith("thumb")]) |
| random.seed(456) |
| selected = random.sample(all_files, 8) |
|
|
| images_list, masks_list = [], [] |
| for fname in selected: |
| img = Image.open(os.path.join(img_dir, fname)).convert("L") |
| img = TF.resize(img, (256, 256)) |
| images_list.append(TF.to_tensor(img).repeat(3, 1, 1)) |
| mask = Image.open(os.path.join(mask_dir, fname)).convert("L") |
| mask = TF.resize(mask, (256, 256), interpolation=transforms.InterpolationMode.NEAREST) |
| masks_list.append(TF.to_tensor(mask)) |
|
|
| real_images = torch.stack(images_list) |
| masks_tensor = torch.stack(masks_list) |
|
|
| |
| print("Generating...") |
| with torch.no_grad(): |
| noise = torch.randn(8, 3, 256, 256, device=device) |
| x_trajs, _ = sampler._impl_sampling(model, noise, None, None, mask=masks_tensor.to(device)) |
| generated = x_trajs[-1].clamp(-1, 1) * 0.5 + 0.5 |
|
|
| |
| h, w = 256, 256 |
| pad = 6 |
| label_h = 40 |
| n_rows = 8 |
| n_cols = 3 |
|
|
| canvas_w = n_cols * w + (n_cols + 1) * pad |
| canvas_h = n_rows * h + (n_rows + 1) * pad + label_h |
| canvas = np.ones((canvas_h, canvas_w, 3), dtype=np.uint8) * 30 |
|
|
| |
| labels = ["Mask", "Generated", "Real"] |
| try: |
| font = ImageFont.truetype("/usr/share/fonts/truetype/dejavu/DejaVuSans-Bold.ttf", 24) |
| except Exception: |
| font = ImageFont.load_default() |
|
|
| pil_canvas = Image.fromarray(canvas) |
| draw = ImageDraw.Draw(pil_canvas) |
| for col, label in enumerate(labels): |
| x_pos = pad + col * (w + pad) + w // 2 |
| bbox = draw.textbbox((0, 0), label, font=font) |
| text_w = bbox[2] - bbox[0] |
| draw.text((x_pos - text_w // 2, 8), label, fill=(255, 255, 255), font=font) |
| canvas = np.array(pil_canvas) |
|
|
| |
| color_map = { |
| 0: (0, 0, 0), |
| 50: (255, 80, 80), |
| 100: (80, 255, 80), |
| 150: (80, 80, 255), |
| 200: (255, 255, 80), |
| 250: (255, 80, 255), |
| } |
|
|
| for row in range(n_rows): |
| y = label_h + pad + row * (h + pad) |
|
|
| |
| m = masks_tensor[row, 0].numpy() |
| m_uint8 = (m * 255).astype(np.uint8) |
| m_colored = np.zeros((h, w, 3), dtype=np.uint8) |
| for val, color in color_map.items(): |
| mask_region = np.abs(m_uint8.astype(int) - val) < 13 |
| m_colored[mask_region] = color |
| canvas[y:y+h, pad:pad+w] = m_colored |
|
|
| |
| g = generated[row].cpu().permute(1, 2, 0).numpy() |
| g = (g * 255).clip(0, 255).astype(np.uint8) |
| canvas[y:y+h, 2*pad+w:2*pad+2*w] = g |
|
|
| |
| r = real_images[row].permute(1, 2, 0).numpy() |
| r = (r * 255).clip(0, 255).astype(np.uint8) |
| canvas[y:y+h, 3*pad+2*w:3*pad+3*w] = r |
|
|
| out = "/data/sichengli/Code/PixelGen/medical_workdirs/exp_PixelGen_Medical_B16/val_samples/mask_control_final.png" |
| Image.fromarray(canvas).save(out) |
| print("Saved:", out, canvas.shape) |
|
|