Segmentation / code /src /diffusion /flow_matching /sampling_medical.py
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# Sampling for Medical Image Generation with Mask Conditioning
# Based on sampling.py with mask support
import torch
import torch.nn as nn
from typing import Callable
import logging
from src.diffusion.base.guidance import *
from src.diffusion.base.scheduling import BaseScheduler
from src.diffusion.base.sampling import BaseSampler
logger = logging.getLogger(__name__)
def shift_respace_fn(t, shift=3.0):
return t / (t + (1 - t) * shift)
def ode_step_fn(x, v, dt, s, w):
return x + v * dt
class EulerSamplerMedical(BaseSampler):
"""
Euler sampler for mask-conditional medical image generation.
"""
def __init__(
self,
w_scheduler: BaseScheduler = None,
timeshift: float = 1.0,
guidance_interval_min: float = 0.0,
guidance_interval_max: float = 1.0,
step_fn: Callable = ode_step_fn,
last_step: float = None,
last_step_fn: Callable = ode_step_fn,
t_eps: float = 0.05,
*args,
**kwargs
):
super().__init__(*args, **kwargs)
self.step_fn = step_fn
self.last_step = last_step
self.last_step_fn = last_step_fn
self.w_scheduler = w_scheduler
self.timeshift = timeshift
self.guidance_interval_min = guidance_interval_min
self.guidance_interval_max = guidance_interval_max
self.t_eps = t_eps
if self.last_step is None or self.num_steps == 1:
self.last_step = 1.0 / self.num_steps
timesteps = torch.linspace(0.0, 1 - self.last_step, self.num_steps)
timesteps = torch.cat([timesteps, torch.tensor([1.0])], dim=0)
self.timesteps = shift_respace_fn(timesteps, self.timeshift)
assert self.last_step > 0.0
assert self.scheduler is not None
def _impl_sampling(self, net, noise, condition, uncondition, mask=None):
"""
Sampling with mask conditioning.
Args:
net: Denoiser network
noise: Initial noise [N, 3, H, W]
condition: Mask embedding [N, hidden_size]
uncondition: Null embedding [N, hidden_size]
mask: Optional mask tensor [N, C, H, W] for direct conditioning
Returns:
x_trajs: List of intermediate samples
v_trajs: List of velocity predictions
"""
batch_size = noise.shape[0]
steps = self.timesteps.to(noise.device, noise.dtype)
# CFG: concatenate uncondition and condition
# Note: For mask conditioning, we handle this differently
x = noise
x_trajs = [noise]
v_trajs = []
for i, (t_cur, t_next) in enumerate(zip(steps[:-1], steps[1:])):
dt = t_next - t_cur
t_cur_batch = t_cur.repeat(batch_size)
sigma = self.scheduler.sigma(t_cur_batch)
dalpha_over_alpha = self.scheduler.dalpha_over_alpha(t_cur_batch)
dsigma_mul_sigma = self.scheduler.dsigma_mul_sigma(t_cur_batch)
if self.w_scheduler:
w = self.w_scheduler.w(t_cur_batch)
else:
w = 0.0
# CFG forward pass
cfg_x = torch.cat([x, x], dim=0)
cfg_t = t_cur_batch.repeat(2)
# For mask conditioning, we need to handle y (class label)
# and pass mask separately to the model
y_uncond = torch.zeros(batch_size, dtype=torch.long, device=noise.device)
y_cond = torch.zeros(batch_size, dtype=torch.long, device=noise.device)
cfg_y = torch.cat([y_uncond, y_cond], dim=0)
if mask is not None:
cfg_mask = torch.cat([
torch.zeros_like(mask), # Unconditional: zero mask
mask # Conditional: actual mask
], dim=0)
out = net(cfg_x, cfg_t, cfg_y, mask=cfg_mask)
else:
out = net(cfg_x, cfg_t, cfg_y, mask=None)
# Convert x-prediction to velocity
out = (out - cfg_x) / (1.0 - cfg_t.view(-1, 1, 1, 1)).clamp_min(self.t_eps)
# Apply CFG
if t_cur > self.guidance_interval_min and t_cur <= self.guidance_interval_max:
out = self.guidance_fn(out, self.guidance)
else:
out = self.guidance_fn(out, 1.0)
v = out
s = ((1 / dalpha_over_alpha) * v - x) / (sigma ** 2 - (1 / dalpha_over_alpha) * dsigma_mul_sigma)
if i < self.num_steps - 1:
x = self.step_fn(x, v, dt, s=s, w=w)
else:
x = self.last_step_fn(x, v, dt, s=s, w=w)
x_trajs.append(x)
v_trajs.append(v)
v_trajs.append(torch.zeros_like(x))
return x_trajs, v_trajs
class HeunSamplerMedical(BaseSampler):
"""
Heun sampler for mask-conditional medical image generation.
Second-order ODE solver for better quality.
"""
def __init__(
self,
scheduler: BaseScheduler = None,
w_scheduler: BaseScheduler = None,
exact_heun: bool = True,
guidance_interval_min: float = 0.0,
guidance_interval_max: float = 1.0,
timeshift: float = 1.0,
step_fn: Callable = ode_step_fn,
last_step: float = None,
last_step_fn: Callable = ode_step_fn,
t_eps: float = 0.05,
*args,
**kwargs
):
super().__init__(*args, **kwargs)
self.scheduler = scheduler
self.exact_heun = exact_heun
self.step_fn = step_fn
self.last_step = last_step
self.last_step_fn = last_step_fn
self.w_scheduler = w_scheduler
self.timeshift = timeshift
self.guidance_interval_min = guidance_interval_min
self.guidance_interval_max = guidance_interval_max
self.t_eps = t_eps
if self.last_step is None or self.num_steps == 1:
self.last_step = 1.0 / self.num_steps
timesteps = torch.linspace(0.0, 1 - self.last_step, self.num_steps)
timesteps = torch.cat([timesteps, torch.tensor([1.0])], dim=0)
self.timesteps = shift_respace_fn(timesteps, self.timeshift)
assert self.last_step > 0.0
assert self.scheduler is not None
def _forward_with_cfg(self, net, x, t, mask=None):
"""Forward pass with CFG for mask conditioning."""
batch_size = x.shape[0] // 2
y = torch.zeros(x.shape[0], dtype=torch.long, device=x.device)
if mask is not None:
out = net(x, t, y, mask=mask)
else:
out = net(x, t, y, mask=None)
return out
def _impl_sampling(self, net, noise, condition, uncondition, mask=None):
"""
Heun sampling with mask conditioning.
"""
batch_size = noise.shape[0]
steps = self.timesteps.to(noise.device)
x = noise
v_hat, s_hat = 0.0, 0.0
x_trajs = [noise]
v_trajs = []
for i, (t_cur, t_next) in enumerate(zip(steps[:-1], steps[1:])):
dt = t_next - t_cur
t_cur_batch = t_cur.repeat(batch_size)
sigma = self.scheduler.sigma(t_cur_batch)
alpha_over_dalpha = 1 / self.scheduler.dalpha_over_alpha(t_cur_batch)
dsigma_mul_sigma = self.scheduler.dsigma_mul_sigma(t_cur_batch)
t_hat = t_next.repeat(batch_size)
sigma_hat = self.scheduler.sigma(t_hat)
alpha_over_dalpha_hat = 1 / self.scheduler.dalpha_over_alpha(t_hat)
dsigma_mul_sigma_hat = self.scheduler.dsigma_mul_sigma(t_hat)
if self.w_scheduler:
w = self.w_scheduler.w(t_cur_batch)
else:
w = 0.0
if i == 0 or self.exact_heun:
# First evaluation
cfg_x = torch.cat([x, x], dim=0)
cfg_t = t_cur_batch.repeat(2)
if mask is not None:
cfg_mask = torch.cat([torch.zeros_like(mask), mask], dim=0)
else:
cfg_mask = None
out = self._forward_with_cfg(net, cfg_x, cfg_t, cfg_mask)
out = (out - cfg_x) / (1.0 - cfg_t.view(-1, 1, 1, 1)).clamp_min(self.t_eps)
if t_cur > self.guidance_interval_min and t_cur <= self.guidance_interval_max:
out = self.guidance_fn(out, self.guidance)
else:
out = self.guidance_fn(out, 1.0)
v = out
s = (alpha_over_dalpha * v - x) / (sigma ** 2 - alpha_over_dalpha * dsigma_mul_sigma)
else:
v = v_hat
s = s_hat
x_hat = self.step_fn(x, v, dt, s=s, w=w)
# Heun correction
if i < self.num_steps - 1:
cfg_x_hat = torch.cat([x_hat, x_hat], dim=0)
cfg_t_hat = t_hat.repeat(2)
if mask is not None:
cfg_mask = torch.cat([torch.zeros_like(mask), mask], dim=0)
else:
cfg_mask = None
out = self._forward_with_cfg(net, cfg_x_hat, cfg_t_hat, cfg_mask)
out = (out - cfg_x_hat) / (1.0 - cfg_t_hat.view(-1, 1, 1, 1)).clamp_min(self.t_eps)
if t_cur > self.guidance_interval_min and t_cur <= self.guidance_interval_max:
out = self.guidance_fn(out, self.guidance)
else:
out = self.guidance_fn(out, 1.0)
v_hat = out
s_hat = (alpha_over_dalpha_hat * v_hat - x_hat) / (sigma_hat ** 2 - alpha_over_dalpha_hat * dsigma_mul_sigma_hat)
v = (v + v_hat) / 2
s = (s + s_hat) / 2
x = self.step_fn(x, v, dt, s=s, w=w)
else:
x = self.last_step_fn(x, v, dt, s=s, w=w)
x_trajs.append(x)
v_trajs.append(v)
v_trajs.append(torch.zeros_like(x))
return x_trajs, v_trajs