# Kvasir-SEG Dataset for PixelGen Medical Image Generation # Polyp segmentation dataset: 1000 RGB colonoscopy images with binary masks import os import torch import random import numpy as np from torch.utils.data import Dataset from PIL import Image import torchvision.transforms as transforms import torchvision.transforms.functional as TF from torchvision.transforms import Normalize class KvasirSEGDataset(Dataset): """ Kvasir-SEG dataset for mask-conditional image generation. Data format: - Images: ~620x530 RGB colonoscopy images (varying sizes) - Masks: Binary polyp segmentation (near 0/255, grayscale) - 1000 image pairs total Returns format compatible with PixelGen: - normalized_image: [3, H, W] in range [-1, 1] - label: class label (0 for all) - metadata: dict with 'raw_image', 'mask', 'class' """ def __init__(self, data_root, resolution=256, split='train', train_ratio=0.9, augment=True, seed=42, max_samples=None, random_flip=True): super().__init__() self.data_root = data_root self.resolution = resolution self.split = split self.augment = augment and (split == 'train') self.random_flip = random_flip and (split == 'train') self.img_dir = os.path.join(data_root, 'images') self.mask_dir = os.path.join(data_root, 'masks') # Get all image files all_files = sorted([f for f in os.listdir(self.img_dir) if f.endswith(('.jpg', '.png', '.jpeg'))]) # Split by index random.seed(seed) indices = list(range(len(all_files))) random.shuffle(indices) split_idx = int(len(indices) * train_ratio) if split == 'train': selected_indices = indices[:split_idx] else: selected_indices = indices[split_idx:] self.images = [all_files[i] for i in sorted(selected_indices)] # Limit samples if specified if max_samples is not None and max_samples < len(self.images): random.seed(seed) self.images = random.sample(self.images, max_samples) # Normalization for images ([-1, 1] range) self.normalize = Normalize(mean=[0.5, 0.5, 0.5], std=[0.5, 0.5, 0.5]) print(f"[KvasirSEGDataset] {split} set: {len(self.images)} images") def __len__(self): return len(self.images) def _load_and_process(self, idx): """Load and process a single sample.""" img_name = self.images[idx] img_path = os.path.join(self.img_dir, img_name) mask_path = os.path.join(self.mask_dir, img_name) # Load images - RGB colonoscopy image = Image.open(img_path).convert('RGB') mask = Image.open(mask_path).convert('L') # Resize to target size (square) image = TF.resize(image, (self.resolution, self.resolution), interpolation=transforms.InterpolationMode.BILINEAR) mask = TF.resize(mask, (self.resolution, self.resolution), interpolation=transforms.InterpolationMode.NEAREST) # Data augmentation if self.augment: # Random horizontal flip if self.random_flip and random.random() > 0.5: image = TF.hflip(image) mask = TF.hflip(mask) # Random vertical flip if self.random_flip and random.random() > 0.5: image = TF.vflip(image) mask = TF.vflip(mask) # Random color jitter for image only if random.random() > 0.5: brightness_factor = random.uniform(0.85, 1.15) image = TF.adjust_brightness(image, brightness_factor) contrast_factor = random.uniform(0.85, 1.15) image = TF.adjust_contrast(image, contrast_factor) saturation_factor = random.uniform(0.85, 1.15) image = TF.adjust_saturation(image, saturation_factor) return image, mask def __getitem__(self, idx): max_retries = 10 for retry in range(max_retries): try: actual_idx = (idx + retry) % len(self.images) image, mask = self._load_and_process(actual_idx) break except Exception as e: if retry == max_retries - 1: raise RuntimeError(f"Failed to load image after {max_retries} retries: {e}") continue raw_image = TF.to_tensor(image) # [3, H, W], range [0, 1] normalized_image = self.normalize(raw_image) mask_tensor = TF.to_tensor(mask) # [1, H, W], range [0, 1] label = 0 metadata = { "raw_image": raw_image, "mask": mask_tensor, "class": label, } return normalized_image, label, metadata class KvasirSEGRandnDataset(Dataset): """ Random noise dataset for evaluation/prediction. Samples random masks from the dataset. """ def __init__(self, data_root, resolution=256, max_num_instances=1000, noise_scale=1.0, seed=42): super().__init__() self.resolution = resolution self.noise_scale = noise_scale mask_dir = os.path.join(data_root, 'masks') all_files = sorted([f for f in os.listdir(mask_dir) if f.endswith(('.jpg', '.png', '.jpeg'))]) random.seed(seed) if max_num_instances <= len(all_files): self.mask_files = random.sample(all_files, max_num_instances) else: self.mask_files = all_files * (max_num_instances // len(all_files) + 1) self.mask_files = self.mask_files[:max_num_instances] self.mask_dir = mask_dir print(f"[KvasirSEGRandnDataset] {len(self.mask_files)} samples for generation") def __len__(self): return len(self.mask_files) def __getitem__(self, idx): xT = self.noise_scale * torch.randn(3, self.resolution, self.resolution) mask_path = os.path.join(self.mask_dir, self.mask_files[idx]) mask = Image.open(mask_path).convert('L') mask = TF.resize(mask, (self.resolution, self.resolution), interpolation=transforms.InterpolationMode.NEAREST) mask_tensor = TF.to_tensor(mask) label = 0 metadata = { "mask": mask_tensor, "class": label, } return xT, label, metadata