#!/usr/bin/env python3 """script for the NEO 1 month dataset to split the data in train (or train+missing) and val set. Creates symlinks.""" from pathlib import Path import os from argparse import ArgumentParser, Namespace from loggez import loggez_logger as logger TRAIN_SET_CUTOFF = "2014-08" TEST_SET_CUTOFF = "2017-02" def _get_data(data_dir: Path): representations = [x.name for x in data_dir.iterdir() if x.is_dir()] data, date_to_representations = {}, {} for representation in representations: data[representation] = [f.stem for f in (data_dir / representation).iterdir() if f.suffix == ".npz"] assert len(data[representation]) > 0, f"No files found for representation '{representation}'" for item in data[representation]: date_to_representations.setdefault(item, []).append(representation) return {k: v for k, v in sorted(date_to_representations.items(), key=lambda item: item[0])} def _total(data: dict[str, list[str]]) -> int: return sum(len(v) for v in data.values()) def get_args() -> Namespace: """cli args""" parser = ArgumentParser() parser.add_argument("data_dir", type=lambda p: Path(p).absolute()) parser.add_argument("--output_path", "-o", required=True, type=lambda p: Path(p).absolute()) parser.add_argument("--mode", choices=["train_set", "test_set", "train_set_plus_missing"], required=True) args = parser.parse_args() assert args.data_dir.exists(), f"'{args.data_dir}' doesn't exist" assert not (pth := (args.output_path / args.mode)).exists(), f"'{pth}' already exists, remove first" return args def main(args: Namespace): """main fn""" data = _get_data(args.data_dir) logger.info(f"Read raw data from '{args.data_dir}' across {len(data)} modalities (total npz: {_total(data)})") if args.mode == "train_set": max_values = max([len(v) for v in data.values()]) data_filtered = {k: v for k, v in data.items() if k <= TRAIN_SET_CUTOFF and len(v) == max_values} elif args.mode == "train_set_plus_missing": max_values = max([len(v) for v in data.values()]) data_filtered = {k: v for k, v in data.items() if k <= TRAIN_SET_CUTOFF} else: # test_set max_values = max([len(v) for v in data.values()]) data_filtered = {k: v for k, v in data.items() if k > TRAIN_SET_CUTOFF and k <= TEST_SET_CUTOFF and len(v) == max_values} logger.info(f"Filtered data using mode='{args.mode}' (total npz: {_total(data_filtered)})") out_dir: Path = args.output_path / args.mode out_dir.mkdir(exist_ok=False, parents=True) for date_stem, modalities in data_filtered.items(): # {date_stem: [modalities]} for modality in modalities: in_file: Path = args.data_dir / modality / f"{date_stem}.npz" out_file: Path = out_dir / modality / f"{date_stem}.npz" out_file.parent.mkdir(parents=True, exist_ok=True) os.symlink(os.path.relpath(in_file, out_file.parent), out_file) logger.info(f"Created symlinks at: '{out_dir}'") if __name__ == "__main__": main(get_args())