---
task_categories:
- feature-extraction
language:
- en
tags:
- nlp
pretty_name: Cell Data train/test
size_categories:
- n<1K
---
# CellTissue Data train/test

 *** ***Data curation still in progress*** ***

Papers manually annotated and reviewed, for the following entity types, where applicable:

      - Cell type
      - Cell line
      - Tissue
      - Cell context
      - Cell component

### Dataset Description

- **Curated by:** [Christine Withers, ]
- **Funded by [optional]:** [Open Targets]
- **Shared by [optional]:** [More Information Needed]
- **Language(s) (NLP):** [English]
- **License:** [More Information Needed]

### Dataset Sources [optional]

The following papers were annotated for use as training / testing text data:

--------------------------------------------------------------------------
PMCID  |  Journal  |  Year
--------------------------------------------------------------------------

PMC12115102  |  _Plants_  |  2025

PMC12101583	 |  _Cancer Biology & Therapy_  |  2025

PMC12081701  |  _Nature Communications_  |  2025

PMC11075828	 |  _PLoS Pathogens_  |  2024

PMC10442740	 |  _Biomedical Reports_  |  2023

PMC12141184	 |  _Saudi Pharmaceutical Journal_  |  2025

PMC12118871	 |  _PLoS One_	 |  2025

PMC12105127	 |  _BMC Complementary Medicine and Therapies_  |  2025

PMC12072392	 |  _International Journal of Molecular Sciences_  |  2025

PMC11699618	 |  _Iscience_  |  2024

PMC11641291	 |  _International Journal of Molecular Sciences_  |  2024

PMC11419360	 |  _PLoS Pathogens_  |  2024

--------------------------------------------------------------------------

## Uses

The aim for this data is for it to be used for the testing and correction of NER models generated in the OTAR3088 project.

## Dataset Structure

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### Curation Rationale

<!-- Motivation for the creation of this dataset. -->

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### Source Data

<!-- This section describes the source data (e.g. news text and headlines, social media posts, translated sentences, ...). -->

#### Data Collection and Processing

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#### Who are the source data producers?

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### Annotations [optional]

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#### Annotation process

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#### Who are the annotators?

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#### Personal and Sensitive Information

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## Bias, Risks, and Limitations

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### Recommendations

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Users should be made aware of the risks, biases and limitations of the dataset. More information needed for further recommendations.

## Citation [optional]

<!-- If there is a paper or blog post introducing the dataset, the APA and Bibtex information for that should go in this section. -->

**BibTeX:**

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**APA:**

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## Glossary [optional]

<!-- If relevant, include terms and calculations in this section that can help readers understand the dataset or dataset card. -->

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## More Information [optional]

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## Dataset Card Authors [optional]

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## Dataset Card Contact

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